CsaV3_7G000140 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G000140
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 302089 .. 302459 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACGAGCACAATCCGGTTGTGCTGACTGATGAACATGGCAACCCCATGTGGCTCAGTGACGTCGAAACCAAGGTTGGCACGTCGCTTGGGTCACTAATGTTTGGTGGTGATGGTGAGGATGGTGGCAATGACTGCTTCTGATGTTAAAGGTAGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGAAGGATGAAGATTGTGGCTCTAGTTCCCACGTCAGGCTCTGCTTCGGTGAGTCCAACTTTCTGAACTATTACTTGTCGTTTCACTTTGGATATGTTCGGGATCAAAAATCACTTTTGTGA

mRNA sequence

ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACGAGCACAATCCGGTTGTGCTGACTGATGAACATGGCAACCCCATGTGGCTCAGTGACGTCGAAACCAAGGTAGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGAAGGATGAAGATTGTGGCTCTAGTTCCCACGTCAGGCTCTGCTTCGGTGAGTCCAACTTTCTGAACTATTACTTGTCGTTTCACTTTGGATATGTTCGGGATCAAAAATCACTTTTGTGA

Coding sequence (CDS)

ATGTACGGGACGAGCGTGGCAACCATCCGACTCACCGACGAGCACAATCCGGTTGTGCTGACTGATGAACATGGCAACCCCATGTGGCTCAGTGACGTCGAAACCAAGGTAGTTCAGCAGGTGGTTCAGGAGGTGGCTTATGGCGACGGTGAGCAGCCGTTGCAGCCACATGAGAAGGATGAAGATTGTGGCTCTAGTTCCCACGTCAGGCTCTGCTTCGGTGAGTCCAACTTTCTGAACTATTACTTGTCGTTTCACTTTGGATATGTTCGGGATCAAAAATCACTTTTGTGA

Protein sequence

MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKDEDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL
Homology
[Close]
BLAST of CsaV3_7G000140 vs. NCBI nr
Match: KGN43153.1 (hypothetical protein Csa_7G004060 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 5.6e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD 60
          MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD
Sbjct: 1  MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD 60

Query: 61 EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL 98
          EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL
Sbjct: 61 EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL 97

[Close]
BLAST of CsaV3_7G000140 vs. TrEMBL
Match: tr|A0A0A0K124|A0A0A0K124_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004060 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.7e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD 60
          MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD
Sbjct: 1  MYGTSVATIRLTDEHNPVVLTDEHGNPMWLSDVETKVVQQVVQEVAYGDGEQPLQPHEKD 60

Query: 61 EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL 98
          EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL
Sbjct: 61 EDCGSSSHVRLCFGESNFLNYYLSFHFGYVRDQKSLL 97

The following BLAST results are available for this feature:
BLAST of CsaV3_7G000140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43153.15.6e-50100.00hypothetical protein Csa_7G004060 [Cucumis sativus][more]
BLAST of CsaV3_7G000140 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000140 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K124|A0A0A0K124_CUCSA3.7e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004060 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G000140.1CsaV3_7G000140.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G000140CSPI07G00170Wild cucumber (PI 183967)cpicucB415
CsaV3_7G000140MELO3C013444Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G000140Bhi05G001121Wax gourdcucwgoB692
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G000140Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G000140Silver-seed gourdcarcucB0201
CsaV3_7G000140Silver-seed gourdcarcucB0347
CsaV3_7G000140Silver-seed gourdcarcucB1026
CsaV3_7G000140Cucumber (Gy14) v2cgybcucB093
CsaV3_7G000140Cucumber (Gy14) v2cgybcucB348
CsaV3_7G000140Cucumber (Gy14) v1cgycucB141
CsaV3_7G000140Cucumber (Gy14) v1cgycucB572
CsaV3_7G000140Cucurbita maxima (Rimu)cmacucB0177
CsaV3_7G000140Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G000140Cucurbita maxima (Rimu)cmacucB0689
CsaV3_7G000140Cucurbita maxima (Rimu)cmacucB0769
CsaV3_7G000140Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G000140Cucurbita moschata (Rifu)cmocucB0161
CsaV3_7G000140Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G000140Cucurbita moschata (Rifu)cmocucB0674
CsaV3_7G000140Cucurbita moschata (Rifu)cmocucB0757
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB0139
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB0371
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB0869
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB0947
CsaV3_7G000140Cucurbita pepo (Zucchini)cpecucB1042
CsaV3_7G000140Wild cucumber (PI 183967)cpicucB118
CsaV3_7G000140Bottle gourd (USVL1VR-Ls)cuclsiB524
CsaV3_7G000140Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G000140Melon (DHL92) v3.5.1cucmeB530
CsaV3_7G000140Melon (DHL92) v3.6.1cucmedB518
CsaV3_7G000140Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G000140Watermelon (Charleston Gray)cucwcgB558
CsaV3_7G000140Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G000140Watermelon (97103) v1cucwmB634
CsaV3_7G000140Watermelon (97103) v1cucwmB640
CsaV3_7G000140Watermelon (97103) v2cucwmbB539
CsaV3_7G000140Watermelon (97103) v2cucwmbB549
CsaV3_7G000140Wax gourdcucwgoB706