CsaV3_6G041300 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTCACTCAGTTTGAACCTGTCACGAAATAAATTGCAACATCCCATCTACTACTGCTTATATATATACGTATGTATGAGCTATCTATATAAGTAATGGAACATACATTTTAAATAAAGCTATTATGTGTGTGTTTTTGTATCTTTTCATCTCACTGTTGTGGGGCGCATGTTTAGAAGTTCTTTTTTTTCTTTCAAAGGGGTGCAAACAGGAGAATTTCTCATCTAAGGAAGCTTAGACTATGCGAGTTTTGATGGAATTTAGTGTGAATTAGTGCAGGTATAATCGTGCCACAAAATATATAGTTTGGTCTTTTTATATGAGAAATGAAATATGTAAATCTCACTGTACTTGTGGCTGCAGGTTGAATGTATCAATTGA ATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTTGAATGTATCAATTGA ATGTGTACTCCTCTGGGTCCTTATGGTCCATGTGACGATTCGGATGCCCCATACGTAAAAGAAATTGCAGAACGGGCAGTGGCTGATCACAACAAATCAGCAGGAACAAATTACACACTCGTTTCCATCGTCAACTGTGAGTCCGTGGTTGTATCCGGAACCAACTACCGCCTTGTGCTGTCGCTTAAGGATGACAGTACTACCAGTGATTTCTTGGTAGTTGTGTATTATAGGCCATGGGATAATTACCTGGAGGTTGAATGTATCAATTGA MCTPLGPYGPCDDSDAPYVKEIAERAVADHNKSAGTNYTLVSIVNCESVVVSGTNYRLVLSLKDDSTTSDFLVVVYYRPWDNYLEVECIN
BLAST of CsaV3_6G041300 vs. NCBI nr
Match: KGN48311.1 (hypothetical protein Csa_6G476020 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. NCBI nr
Match: NP_001267677.1 (cysteine proteinase inhibitor 5-like [Cucumis sativus] >BAA28867.1 cystein proteinase inhibitor [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. NCBI nr
Match: AFK40971.1 (unknown [Lotus japonicus]) HSP 1 Score: 77.4 bits (189), Expect = 2.8e-11 Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. NCBI nr
Match: XP_009396391.1 (PREDICTED: cysteine proteinase inhibitor 1-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. NCBI nr
Match: XP_011008977.1 (PREDICTED: cysteine proteinase inhibitor 5-like [Populus euphratica]) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TAIR10
Match: AT5G47550.1 (Cystatin/monellin superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 9.2e-09 Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. Swiss-Prot
Match: sp|Q6TPK4|CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-08 Identity = 27/78 (34.62%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. Swiss-Prot
Match: sp|Q41916|CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07 Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. Swiss-Prot
Match: sp|Q10J94|CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.5e-05 Identity = 26/79 (32.91%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. Swiss-Prot
Match: sp|P31726|CYT1_MAIZE (Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-04 Identity = 22/78 (28.21%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TrEMBL
Match: tr|A0A0A0KKN2|A0A0A0KKN2_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_6G476020 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 9.0e-43 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TrEMBL
Match: tr|O80389|O80389_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 7.4e-13 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TrEMBL
Match: tr|I3SL29|I3SL29_LOTJA (Cysteine proteinase inhibitor OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.8e-11 Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TrEMBL
Match: tr|A0A1D1YNQ2|A0A1D1YNQ2_9ARAE (Cysteine proteinase inhibitor (Fragment) OS=Anthurium amnicola OX=1678845 GN=CYS5 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.1e-11 Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of CsaV3_6G041300 vs. TrEMBL
Match: tr|M0SNR0|M0SNR0_MUSAM (Cysteine proteinase inhibitor OS=Musa acuminata subsp. malaccensis OX=214687 GN=103981394 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.0e-11 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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