CsaV3_6G013460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G013460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ribosomal RNA large subunit methyltransferase I isoform X1
Location	chr6 : 9582363 .. 9586590 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAGTTCAACAAATATGATGACATACGTTAATCTATCTCAATCGAATTACATGCATTAACACAACTCAATAAATTCGAAACTAAATTTATCATTGACAAAATAAACACAATTAACGTAAAAATTAGCTATCAATCTCAAAATCATATATTAACCAGATCAGTAAAACTGCAATTTAACCTATTTTGAGTTATCAAAGGATACGATTGGGTTTTGCAATTAGATGTAATCTAAATTCCCGCTCAAGAGTTGAAGAGATTGCGTTGCGTCTCGTCATCAACAAACGCGGAAGCATGCAGCTCCTTCAATCCCGCTTGATAAAGTCTCTATCAATTTCTTCTTCACCGGCCGCCTCCACAATCCAAGAAATTGCTTCTGCTTGCCCCAAAGGTCAGTCTACGATTTATATCCCTCACATTCCAGCTGAAAAATGAATGTCGATTGTCCCAATTCGTTTATGTTTGTTACTCTCGTGTTTGCCGAGCGTTTTAGCTTCTGGGTGTATCAAAATCCATGTTTTTCGATTTATTCTGCAGCTTTTCATGTTAATTACGCTTTTAGAGTAATTATATTGGTGGGGTACTGAAATTAAGCAGTTATGAGGATTGAAATGTGGTAATGTTGATTTTGGTTAGTGATGGGTTTTGTTCTGTTCAATTGTGTTGCATTTGGGTTTTGTAGGTTTGGCTAAGGTTGTGCTGAAGAAGGGGAAGGCGCAGCTTTTCAAAGATGGGAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTCCTGGTAGCTGATGGGACTGAAAAACCTATAGGATGGGGTCTGTATAATTCAGTTTCTATGTTCTCTGTTAGATTGATGCAGTTGGAAGAAGAGGCAGCTAGGTATTCAACTGACCAATGCTTGAACTCTGTGATGAAGATCACCACCTTCTTTATGTAAATTACCAATTTATATGCAATGCAGAGACCCTTCCTGCACATTAAATGTTGAGAAGATGATTGAAACGAGGGTACATACTGCTAGAGAATTACGAAAGAACTTGGGGCTTCCGTCAGCTAGTACTAATGCTTATCGTCTTGTTAATAGTGAAGGAGACAGGTATCGATCTCAAGTATTATGTATTTATGTCCATGTCTTAGACATAATGCATTCCATATCTACAATAGGGCCACCATGCATCGATCTTCCTTCTTTAAACTCGCTTGGAAAACCATTCCCAACTGATCCAACTGTTCATTTCTATGTGTGTATGAGTTCAGAGGGAGTGTGAGGCTCTTAGACCATACTTTCTTTCTTCCAGTTATAAAACTAAAAGCTCCCCAATGCCTAAACCTCATGTCTCTTATATTTGGTCCTGAATCTTATTTATTTGTGTACTGAAACCTATAGTTATTAGATTTATCCAAAATGTGTTACTATCATTATTTTTGTTTTATTTTGTGCAGATTGTCAGGACTGATTATCGATGTCTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAAGCTGAAATAGAGGATTGTGTCCGTGGAATTGAAGAAATCAACCATGTGAAATGGAGACCATCGGTGGACATTCTGAAAGAAGAAGGTATAGATGTGTCTGAATTGAAGGATACAAGTCCGTCTACTTGTCCTGAAAGAACAAAGGTAGAAAACCACTGCAACATTTGTATTTCTTCTAGAAATGTTATTAAATATCATTTTATGGGGAAATGTAAATGAATTCATTCTTTATTTATGCAGTTGCATTAGACATTGCTCTATGTGAACAAAACTAAGTAGCTCAATTCCATGAATGTAATGGCTCTCATGGGTCATGAATAATGAATCATGTTTTGACACATGATGTAACACAAATAAAAATTTTCGTTCTTCACACAATTCTCTACATGTGGATATATGTCATGTTTATGGTAACTAAATGTTAAAATGTCGACTCCTTTTGATGAGTAAACTGATCTTATATGCTTTGATAGTCATTAGTTGAAACTAATAGGCAGGAGTTTGCTTATATTAATAAGCCTTATGCATATCTGATATCCCCACTGGAATATGTTCTAGCTTGTGATAATTCCTTTCCTGGTAACGAGAAATGCAATGAGAGTATCATGTTAATGTAGAAGATACTTCTGAAGTTATATAATCCTGATACAATCAAGTTTCCACCAAATCACATGAGATATTAAACATGCCTTATTTTGATAGGTGATGGAGAATGACATTTTTTATGCCATCTCACTTGAAGGCCAGAAAACAGGTTTTTATGCTGATCAGCGTGAAAATCGTCATTTTATCTCAACAATTTCGGAGGGTCAGAAAGTTCTTGATCTCTGCTGCTATAGTGGTGGGTTTTCTCTAAATGCATTACGTGGTGGAGCTATTAATGTCACTGGTAAACATTTCTTCTTCTGTGTATATTGGACCTCAAATAAAGTACTTGAAGTACAAGGCAAAGGGCAGTAAATCCTGTTTGTGTTTGGTATGCAATCTGAAAATAGAACTTTACGAACAATAAATTCAAAGAAAATAGAGTTAATATTTCATATTTTCAAGTACGTGATTTTAGCAGATTTAGAATTTAGATCTCAACTTAAACAACTGTTCAAGATATGTTTTATAAGATATTTATAAACAAAATTTTCTGTCCTAAAAAATATATTTGTAAACCTATTCAGAATTTTCACTTTCAGGGATTTCAAGCCTAGTACAATGGTGCTATAAACATCTCATAAATTCACTAATTATCAGGTATTGATTCGTCATTGCCTGCACTGGAGCTAGCAAAAGAAAATGTGGTCCTTAATAGCATGGATCCGGAAAGAATATCATTTCTGAAAGCGGATGCCACAGCATTCATGAAGGATGCCCTATCTAGGAATGAATCTTGGGATGTAGTCATTTTGGATCCTCCTAAACTAGCACCACGGAAAAAGGTATCATGCATTTGATTATTTGCTGATTGCTCTGTTAATAATTTTTTTTCTTAATTCTTGAACTCTCATGATCTTACAAGTTAGAACCATGTGAAATATTGCTGCTGAACAAAAGTTCTTAAATCTTGGATTCTATTAATTCTTACAAGTTGGAATCACGTGAAATCCTAAACTATTTGGTATCGTTGCTTTTTAAAATATTAGATTTTTTTGTCCTCATTACTTCATACGTAGGCGTCCTGGGTGGGATTGGTATCTCAGCTCGTCTTTCATAAATGGGCAAGTAAAAGGTTTAGTGCTTATGAACTAATGTGAGGTTCAATTGGACTTGGTATGTTTGGGAACAGAAAGCAAATGGACATATTTTGGTGAATGTGTAGACATTCAAGTTTTGTTGATTTGGTTTCATGACTGTGACCTGTTTTTTTAGCATTATTTTCTTATAAATTTACGAATTTATGAATAAAGAGTGGTCTGATTTCACAGTATAAACATTTTAGTCTTTACATGCCTGGCTCAATCATAATTCTTGAAAATAGTTTTGATTCTTAATAAATGGAATTAAGCAGGTTAAAAATTCTTTCTTGCACTCCTATTTGGATTTGCATTCAATTAGATCAAATTGTTTGTCTTCAAGTTCATTGATTTTGATTTTTATTCAATCGTTTGCTAGACATAACATTTGATTGTTGGTACCATCACACTAACTATAGTTTAGTAGGTTTTGCAAACTGCATCAGGTATGTACAGGAATTTAAATTCATTGGCAATGCAGCTCACAAGAAAAGGTGGTTTTCTCATGACTTGTTCGTGTTCTGGAGCAATGACACAAAGTGGGATGTTCTTGCAAATACTTCAGGCAAGTCTAGTTCCACCACCACCCAAGAACTGAAAATCTTCTTGGTCATAACATTATTATGTGGTTATTAAGTTTCTTCCCCCATCATCTTGACTTAAAACAACACGTCAAGCGATACAAAGATTGTAGTTTGCAACAATGAGTCATTTAGGATAATCTCATTCAGATCACTGAGAAAGGAAAACAGTAGTTCCAATAGAATATATTCAGCATGTTTAAGGAAACTAAACTGGTTTGTACTTGTCCCTTCTTTTAAACAGGGTGCAGCATCAACGGCTAAAAAGAAAATTACGGTTCTACGACAAGCAGGAGCAGCATGTGATCACCCAATCGACCCTACTTATCCAGAGGGTGCTTATCTTTCTAACATTCTTCTACGAGTGCTATGA

mRNA sequence

ATGCAGCTCCTTCAATCCCGCTTGATAAAGTCTCTATCAATTTCTTCTTCACCGGCCGCCTCCACAATCCAAGAAATTGCTTCTGCTTGCCCCAAAGGTTTGGCTAAGGTTGTGCTGAAGAAGGGGAAGGCGCAGCTTTTCAAAGATGGGAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTCCTGGTAGCTGATGGGACTGAAAAACCTATAGGATGGGGTCTGTATAATTCAGTTTCTATGTTCTCTGTTAGATTGATGCAGTTGGAAGAAGAGGCAGCTAGAGACCCTTCCTGCACATTAAATGTTGAGAAGATGATTGAAACGAGGGTACATACTGCTAGAGAATTACGAAAGAACTTGGGGCTTCCGTCAGCTAGTACTAATGCTTATCGTCTTGTTAATAGTGAAGGAGACAGATTGTCAGGACTGATTATCGATGTCTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAAGCTGAAATAGAGGATTGTGTCCGTGGAATTGAAGAAATCAACCATGTGAAATGGAGACCATCGGTGGACATTCTGAAAGAAGAAGGTATAGATGTGTCTGAATTGAAGGATACAAGTCCGTCTACTTGTCCTGAAAGAACAAAGGTGATGGAGAATGACATTTTTTATGCCATCTCACTTGAAGGCCAGAAAACAGGTTTTTATGCTGATCAGCGTGAAAATCGTCATTTTATCTCAACAATTTCGGAGGGTCAGAAAGTTCTTGATCTCTGCTGCTATAGTGGTGGGTTTTCTCTAAATGCATTACGTGGTGGAGCTATTAATGTCACTGGTATTGATTCGTCATTGCCTGCACTGGAGCTAGCAAAAGAAAATGTGGTCCTTAATAGCATGGATCCGGAAAGAATATCATTTCTGAAAGCGGATGCCACAGCATTCATGAAGGATGCCCTATCTAGGAATGAATCTTGGGATGTAGTCATTTTGGATCCTCCTAAACTAGCACCACGGAAAAAGGTTTTGCAAACTGCATCAGGTATGTACAGGAATTTAAATTCATTGGCAATGCAGCTCACAAGAAAAGGTGGTTTTCTCATGACTTGTTCGTGTTCTGGAGCAATGACACAAAGTGGGATGTTCTTGCAAATACTTCAGGGTGCAGCATCAACGGCTAAAAAGAAAATTACGGTTCTACGACAAGCAGGAGCAGCATGTGATCACCCAATCGACCCTACTTATCCAGAGGGTGCTTATCTTTCTAACATTCTTCTACGAGTGCTATGA

Coding sequence (CDS)

ATGCAGCTCCTTCAATCCCGCTTGATAAAGTCTCTATCAATTTCTTCTTCACCGGCCGCCTCCACAATCCAAGAAATTGCTTCTGCTTGCCCCAAAGGTTTGGCTAAGGTTGTGCTGAAGAAGGGGAAGGCGCAGCTTTTCAAAGATGGGAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTCCTGGTAGCTGATGGGACTGAAAAACCTATAGGATGGGGTCTGTATAATTCAGTTTCTATGTTCTCTGTTAGATTGATGCAGTTGGAAGAAGAGGCAGCTAGAGACCCTTCCTGCACATTAAATGTTGAGAAGATGATTGAAACGAGGGTACATACTGCTAGAGAATTACGAAAGAACTTGGGGCTTCCGTCAGCTAGTACTAATGCTTATCGTCTTGTTAATAGTGAAGGAGACAGATTGTCAGGACTGATTATCGATGTCTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAAGCTGAAATAGAGGATTGTGTCCGTGGAATTGAAGAAATCAACCATGTGAAATGGAGACCATCGGTGGACATTCTGAAAGAAGAAGGTATAGATGTGTCTGAATTGAAGGATACAAGTCCGTCTACTTGTCCTGAAAGAACAAAGGTGATGGAGAATGACATTTTTTATGCCATCTCACTTGAAGGCCAGAAAACAGGTTTTTATGCTGATCAGCGTGAAAATCGTCATTTTATCTCAACAATTTCGGAGGGTCAGAAAGTTCTTGATCTCTGCTGCTATAGTGGTGGGTTTTCTCTAAATGCATTACGTGGTGGAGCTATTAATGTCACTGGTATTGATTCGTCATTGCCTGCACTGGAGCTAGCAAAAGAAAATGTGGTCCTTAATAGCATGGATCCGGAAAGAATATCATTTCTGAAAGCGGATGCCACAGCATTCATGAAGGATGCCCTATCTAGGAATGAATCTTGGGATGTAGTCATTTTGGATCCTCCTAAACTAGCACCACGGAAAAAGGTTTTGCAAACTGCATCAGGTATGTACAGGAATTTAAATTCATTGGCAATGCAGCTCACAAGAAAAGGTGGTTTTCTCATGACTTGTTCGTGTTCTGGAGCAATGACACAAAGTGGGATGTTCTTGCAAATACTTCAGGGTGCAGCATCAACGGCTAAAAAGAAAATTACGGTTCTACGACAAGCAGGAGCAGCATGTGATCACCCAATCGACCCTACTTATCCAGAGGGTGCTTATCTTTCTAACATTCTTCTACGAGTGCTATGA

Protein sequence

MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL

Homology

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BLAST of CsaV3_6G013460 vs. NCBI nr
Match: XP_004139905.1 (PREDICTED: uncharacterized protein LOC101215914 isoform X1 [Cucumis sativus])

HSP 1 Score: 859.8 bits (2220), Expect = 4.2e-246
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0


Query: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60
           MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD
Sbjct: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60

Query: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120
           RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI
Sbjct: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120

Query: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180
           ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA
Sbjct: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180

Query: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240
           EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE
Sbjct: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240

Query: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300
           GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL
Sbjct: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300

Query: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360
           AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY
Sbjct: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360

Query: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP 420
           RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP
Sbjct: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP 420

Query: 421 IDPTYPEGAYLSNILLRVL 440
           IDPTYPEGAYLSNILLRVL
Sbjct: 421 IDPTYPEGAYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. NCBI nr
Match: XP_011656974.1 (PREDICTED: uncharacterized protein LOC101215914 isoform X3 [Cucumis sativus])

HSP 1 Score: 848.6 bits (2191), Expect = 9.6e-243
Identity = 439/457 (96.06%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60
           MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD
Sbjct: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60

Query: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120
           RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI
Sbjct: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120

Query: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180
           ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA
Sbjct: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180

Query: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240
           EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE
Sbjct: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240

Query: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300
           GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL
Sbjct: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300

Query: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360
           AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY
Sbjct: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360

Query: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQIL------------------QGAAST 420
           RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQIL                  QGAAST
Sbjct: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQATCLRKLNWFVLVPSFKQGAAST 420

Query: 421 AKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL 440
           AKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL
Sbjct: 421 AKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL 457

[Close]

BLAST of CsaV3_6G013460 vs. NCBI nr
Match: XP_008456287.1 (PREDICTED: ribosomal RNA large subunit methyltransferase I isoform X1 [Cucumis melo])

HSP 1 Score: 836.6 bits (2160), Expect = 3.8e-239
Identity = 425/436 (97.48%), Postives = 430/436 (98.62%), Query Frame = 0


Query: 4   LQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII 63
           LQSRLIKSLSISSSPAASTIQEIA+ACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII
Sbjct: 4   LQSRLIKSLSISSSPAASTIQEIATACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII 63

Query: 64  GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETR 123
           GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAA DPSCTLNVEKMIETR
Sbjct: 64  GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAASDPSCTLNVEKMIETR 123

Query: 124 VHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE 183
           +HTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE
Sbjct: 124 IHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE 183

Query: 184 DCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEGQK 243
           DCVRGIEEINHVKWRPSVDILKEEGIDVSELK+TSPSTCPERTKV EN IFY ISLEGQK
Sbjct: 184 DCVRGIEEINHVKWRPSVDILKEEGIDVSELKETSPSTCPERTKVKENGIFYTISLEGQK 243

Query: 244 TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE 303
           TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE
Sbjct: 244 TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE 303

Query: 304 NVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYRNL 363
           NVVLNSMDPERISFLKADATAFMKDALSRNESWD+VILDPPKLAPRKKVLQTASGMYRNL
Sbjct: 304 NVVLNSMDPERISFLKADATAFMKDALSRNESWDIVILDPPKLAPRKKVLQTASGMYRNL 363

Query: 364 NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDP 423
           NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAAS AKKKITVLR AGAACDHPIDP
Sbjct: 364 NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASMAKKKITVLRPAGAACDHPIDP 423

Query: 424 TYPEGAYLSNILLRVL 440
           +YPEGAYLSNILLRVL
Sbjct: 424 SYPEGAYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. NCBI nr
Match: XP_023512212.1 (uncharacterized protein LOC111777007 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 807.4 bits (2084), Expect = 2.5e-230
Identity = 408/439 (92.94%), Postives = 425/439 (96.81%), Query Frame = 0


Query: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60
           MQ LQ+RL+KSLS+SSSPAASTIQEIASA PKGL+KVVLKKGK QLFKDGSPMVYSGAVD
Sbjct: 1   MQQLQARLLKSLSVSSSPAASTIQEIASARPKGLSKVVLKKGKTQLFKDGSPMVYSGAVD 60

Query: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120
           RIIGRPPPKTGDVVLVADG EKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTL+++K+I
Sbjct: 61  RIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLDMQKLI 120

Query: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180
           ETR+HTARELRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA
Sbjct: 121 ETRIHTARELRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180

Query: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240
           EIEDCVRGI+EINHVKWRPSV+ILKEEGIDVSELKDT+PS  PERTKV EN IFYAISLE
Sbjct: 181 EIEDCVRGIDEINHVKWRPSVEILKEEGIDVSELKDTNPSIYPERTKVTENGIFYAISLE 240

Query: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300
           GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA RGGAINVTGIDSSLPALEL
Sbjct: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAARGGAINVTGIDSSLPALEL 300

Query: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360
           AKENV+LNSMDP+RISFLKADAT FMKDALSRNESWD+VILDPPKLAPRKKVLQTASGMY
Sbjct: 301 AKENVILNSMDPDRISFLKADATTFMKDALSRNESWDIVILDPPKLAPRKKVLQTASGMY 360

Query: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP 420
           R LNSLAMQLT+KGG LMTCSCSGAMTQSGMFLQ LQGAAS AKKKITVLRQAGAACDHP
Sbjct: 361 RTLNSLAMQLTKKGGLLMTCSCSGAMTQSGMFLQTLQGAASMAKKKITVLRQAGAACDHP 420

Query: 421 IDPTYPEGAYLSNILLRVL 440
           IDPTYPEGAYLSNILLRVL
Sbjct: 421 IDPTYPEGAYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. NCBI nr
Match: XP_022943486.1 (uncharacterized protein LOC111448241 [Cucurbita moschata])

HSP 1 Score: 807.0 bits (2083), Expect = 3.2e-230
Identity = 408/439 (92.94%), Postives = 424/439 (96.58%), Query Frame = 0


Query: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60
           MQ LQ+RL+KSLSISSSPAASTIQEIASA PKGL+KVVLKKGK QLFKDGSPMVYSGA+D
Sbjct: 1   MQQLQARLLKSLSISSSPAASTIQEIASARPKGLSKVVLKKGKTQLFKDGSPMVYSGAID 60

Query: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120
           RIIGRPPPKTGDVVLVADG EKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTL+++K+I
Sbjct: 61  RIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLDMQKLI 120

Query: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180
           ETR+HTARELRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA
Sbjct: 121 ETRIHTARELRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180

Query: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240
           EIEDCVRGI+EINHVKWRPSV+ILKEEGIDVSELKDT+PS C ERTKV EN IFYAISLE
Sbjct: 181 EIEDCVRGIDEINHVKWRPSVEILKEEGIDVSELKDTNPSICLERTKVTENGIFYAISLE 240

Query: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300
           GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA RGGAINVTGIDSSLPALEL
Sbjct: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAARGGAINVTGIDSSLPALEL 300

Query: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360
           AKENV+LNSMDP+RISFLKADAT FMKDALSRNE WD+VILDPPKLAPRKKVLQTASGMY
Sbjct: 301 AKENVILNSMDPDRISFLKADATTFMKDALSRNECWDIVILDPPKLAPRKKVLQTASGMY 360

Query: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP 420
           R LNSLAMQLTRKGG LMTCSCSGAMTQSGMFLQ LQGAAS AKKKITVLRQAGAACDHP
Sbjct: 361 RTLNSLAMQLTRKGGLLMTCSCSGAMTQSGMFLQTLQGAASMAKKKITVLRQAGAACDHP 420

Query: 421 IDPTYPEGAYLSNILLRVL 440
           IDPTYPEGAYLSNILLRVL
Sbjct: 421 IDPTYPEGAYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. TAIR10
Match: AT1G54310.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 655.2 bits (1689), Expect = 2.8e-188
Identity = 321/436 (73.62%), Postives = 376/436 (86.24%), Query Frame = 0


Query: 4   LQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII 63
           L  RL  SL  SSS       +IAS+ P+G+AKVVLKKGK QLFKDGSPMVYSGAVDRII
Sbjct: 26  LPCRLHHSLFYSSS-------QIASSRPQGVAKVVLKKGKTQLFKDGSPMVYSGAVDRII 85

Query: 64  GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETR 123
           G+PPP+TGDVV+VADGTE PIGWGLYNSVSMF VRLMQL+ E+ RDPSC LN+EK+++TR
Sbjct: 86  GKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALNIEKLLQTR 145

Query: 124 VHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE 183
           +  A +LRK+L LPSA+TNAYRLVNSEGDRLSGLI+DVFGD+AVVASSAAW+EKY+ E+E
Sbjct: 146 IAEAVQLRKSLALPSANTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRIEVE 205

Query: 184 DCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEGQK 243
            C+R I+ INH+ WRPS+D+LKE+G D+S LK T  ST P+R+ V+EN I YAISLEGQK
Sbjct: 206 SCLRSIDGINHINWRPSLDVLKEDGFDISSLKQTQSSTLPQRSMVVENGISYAISLEGQK 265

Query: 244 TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE 303
           TGFY DQRENRHFISTIS G++VLDLCCYSGGF+LNA RGGA +V GIDSSLPALELA+E
Sbjct: 266 TGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGATSVIGIDSSLPALELARE 325

Query: 304 NVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYRNL 363
           NV+LN+MDPE++ F K D+T FMK ALSR E+WD+VILDPPKLAPRKKVL  ASGMYRNL
Sbjct: 326 NVILNNMDPEKVVFFKQDSTEFMKGALSREETWDIVILDPPKLAPRKKVLHNASGMYRNL 385

Query: 364 NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDP 423
           NSLAM+LTR GG +MTCSCSGAMTQSG FL ILQ AA+ + +KITV+R+AGAA DHP+DP
Sbjct: 386 NSLAMRLTRSGGLMMTCSCSGAMTQSGKFLGILQSAAAMSGRKITVVREAGAASDHPLDP 445

Query: 424 TYPEGAYLSNILLRVL 440
           +YP+G YLSN+LLRVL
Sbjct: 446 SYPQGQYLSNLLLRVL 454

[Close]

BLAST of CsaV3_6G013460 vs. Swiss-Prot
Match: sp|B4RRY8|RLMI_ALTMD (Ribosomal RNA large subunit methyltransferase I OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rlmI PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.5e-56
Identity = 141/406 (34.73%), Postives = 221/406 (54.43%), Query Frame = 0


Query: 35  AKVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSM 94
           A+V+L+  + +  +   P V+  AV  + GR   + GD V V D     +G G Y+  S 
Sbjct: 3   AQVILQPSRDKSLRRKHPWVFESAVAELKGR--ARIGDTVDVFDDEGDWLGRGAYSPHSK 62

Query: 95  FSVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRL 154
             VR+   +++ + D    L        R+ TA  LRK L  P+  TNA+R + SE D L
Sbjct: 63  IRVRMWTFKKDESIDNGFFLR-------RLETALALRKRLFDPN-KTNAFRWIASESDGL 122

Query: 155 SGLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGID-VSE 214
            G+ ID++ ++AVV   +A  EK++ +I   +  +    HV  R  VD+ K+EG++ V+ 
Sbjct: 123 PGVTIDLYDNVAVVQLLSAGGEKHRDKIVWAITKLMPDVHVYERSDVDVRKKEGLEPVTG 182

Query: 215 LKDTSPSTCPERTKVMENDIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCY 274
           +    P   P +  V EN I   + +E G KTGFY DQR++R   +  ++   VL+   Y
Sbjct: 183 VLHGQP---PTQVTVKENGINIVVDIESGHKTGFYLDQRDSRAAAAHYAKDADVLNCFSY 242

Query: 275 SGGFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSR 334
           +G FS  AL GGA +VT +D S PAL+LAK +V +N  D +R  +L  D    +++   +
Sbjct: 243 TGTFSCYALSGGAKSVTNVDVSQPALDLAKHHVAINGFDDKRTQYLNKDVFKALREYHEQ 302

Query: 335 NESWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMF 394
           N+ +D+VILDPPK    K  L  A+  Y+++N   +   + GG L+T SCSG M  + +F
Sbjct: 303 NKQFDMVILDPPKFVDNKASLNRAARGYKDINMYGIHAVKSGGLLLTFSCSGLM-PADLF 362

Query: 395 LQILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRV 439
            +++  AA  A + I ++ +   A DHPI  +YPEG YL  ++  V
Sbjct: 363 QKVVADAALDAGRTIKIIARLNQASDHPIIGSYPEGYYLKGLVCEV 394

[Close]

BLAST of CsaV3_6G013460 vs. Swiss-Prot
Match: sp|Q6LQ36|RLMI_PHOPR (Ribosomal RNA large subunit methyltransferase I OS=Photobacterium profundum (strain SS9) OX=298386 GN=rlmI PE=3 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 4.3e-53
Identity = 136/398 (34.17%), Postives = 206/398 (51.76%), Query Frame = 0


Query: 37  VVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFS 96
           + L KG+ +  +   P V+S  +DRI G   P  G+ V V D   + +  G Y+  S   
Sbjct: 5   IYLVKGREKSLRRRHPWVFSRGIDRIEGN-KPSMGETVEVYDNKGEWLARGAYSPQSQIR 64

Query: 97  VRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSG 156
           +R+   +++        +NV+  ++ R+  A+ LR  L      T  YRL+ +E D L G
Sbjct: 65  IRVWTFDKKE------VINVDFFVK-RLKAAQALRDVLAARDGLT-GYRLIAAESDGLPG 124

Query: 157 LIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGID--VSEL 216
           + ID + +  V    +A  E+ K  + + +        V  R  V + K+EG+      L
Sbjct: 125 ITIDRYQNFLVCQLLSAGAEEQKDALVEALNICYPECSVYERSDVAVRKKEGLKQRTGVL 184

Query: 217 KDTSPSTCPERTKVMENDIFYAISL-EGQKTGFYADQRENRHFISTISEGQKVLDLCCYS 276
               P   P+   + EN I   + +  G KTGFY DQR++R        G++VL+  CY+
Sbjct: 185 SGEEP---PKFVTIEENGIKINVDIVGGHKTGFYLDQRDSRQAAVKYVNGKRVLNCFCYT 244

Query: 277 GGFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRN 336
           GGF L AL+GGA  V  +D S PAL+ A+ N   N +  E   F+ AD    +++   R 
Sbjct: 245 GGFGLYALKGGASQVVNVDVSQPALDTARLNTEANGLPVENAEFVNADVFKLLREYRERG 304

Query: 337 ESWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFL 396
           E +DVVI+DPPK A  K  L  A   Y+++N LAMQ+   GG L+T SCSG M  +G+F 
Sbjct: 305 EFFDVVIMDPPKFAESKSQLVGACRGYKDINMLAMQILNPGGILLTYSCSGLM-DNGLFQ 364

Query: 397 QILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYL 432
           +I+  AA  A +++  + + G A DHP+D  YPEG YL
Sbjct: 365 KIVADAALDAHREVQFIERFGQAADHPLDSAYPEGFYL 389

[Close]

BLAST of CsaV3_6G013460 vs. Swiss-Prot
Match: sp|Q3IKJ0|RLMI_PSEHT (Ribosomal RNA large subunit methyltransferase I OS=Pseudoalteromonas haloplanktis (strain TAC 125) OX=326442 GN=rlmI PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.7e-53
Identity = 131/407 (32.19%), Postives = 212/407 (52.09%), Query Frame = 0


Query: 37  VVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFS 96
           V L+ G+ +  K   P ++S A+ +I G+  P  GD V + D   K +    Y+  S   
Sbjct: 5   VYLQAGRDKSLKRKHPWLFSKAIKKIKGK--PGLGDTVTIHDSEGKFLATAAYSPHSQIR 64

Query: 97  VRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSG 156
            R+   +E+   D       +   E R+  A E R  + +       +RL  +E D L G
Sbjct: 65  ARVWSFDEKEVID-------QHFFERRLRRALEARSQV-IEEGGLTGFRLCAAESDFLPG 124

Query: 157 LIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSE--- 216
           + ID F ++ V    +A  E++K EI   +  I     +  R  V++  +EG++  +   
Sbjct: 125 VTIDKFDNVLVCQLLSAGAERHKGEIVGALMAIFPGMSIYERSDVEVRTKEGLEPIKGAL 184

Query: 217 --LKDTSPSTCPERTKVMENDIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCC 276
              + T+P    E    +E DI     ++G KTGFY DQR++R  +   S+ + VL+   
Sbjct: 185 WGNEPTAPVLIAENGFKIEVDI-----IDGHKTGFYLDQRDSRAALERFSKDKTVLNCFS 244

Query: 277 YSGGFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALS 336
           Y+G FSL ALRGG  +VT +D S PAL+ AK NV  N++D +++ F+K D    ++    
Sbjct: 245 YTGTFSLYALRGGCKHVTNVDVSQPALDTAKRNVEHNNLDLDKVDFVKQDVFKLLRQYRE 304

Query: 337 RNESWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGM 396
               +D +++DPPK A  K  L  A   Y+++N +AMQ+ + GG L+T SCSG M Q+ +
Sbjct: 305 DGVLFDTIVMDPPKFADNKAQLTGACRGYKDINMIAMQILKPGGTLLTFSCSGLMEQN-L 364

Query: 397 FLQILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRV 439
           F +++  AA  A K + ++ +   A DHPI  +YPEG YL  ++ +V
Sbjct: 365 FQKVVADAALDAGKDLLIMERLNQAADHPIAGSYPEGFYLKGLICKV 395

[Close]

BLAST of CsaV3_6G013460 vs. Swiss-Prot
Match: sp|B1LJ30|RLMI_ECOSM (Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=rlmI PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 9.7e-53
Identity = 129/405 (31.85%), Postives = 215/405 (53.09%), Query Frame = 0


Query: 36  KVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMF 95
           ++VL KG+ +      P ++SGAV R+ G+     G+ + + D   K +  G Y+  S  
Sbjct: 4   RLVLAKGREKSLLRRHPWIFSGAVARMEGK--ASLGETIDIVDHQGKWLARGAYSPASQI 63

Query: 96  SVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLS 155
             R+         DPS ++++      R+  A++ R  L       N+YRL+  E D L 
Sbjct: 64  RARVWTF------DPSESIDI-AFFTRRLQQAQKWRDWLA-QKDGLNSYRLIAGESDGLP 123

Query: 156 GLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELK 215
           G+ ID FG+  V+   +A  E  +A +   ++ +     +  R  V + K+EG+++++  
Sbjct: 124 GITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGP 183

Query: 216 DTSPSTCPERTKVMENDIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCYSG 275
            T     P    + E+ +   + ++ G KTG+Y DQR++R       E ++VL+   Y+G
Sbjct: 184 VTG-ELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTG 243

Query: 276 GFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNE 335
           GF+++AL GG   V  +D+S  AL++A++NV LN +D  +  F++ D    ++    R E
Sbjct: 244 GFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGE 303

Query: 336 SWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQ 395
            +DV+++DPPK    K  L  A   Y+++N LA+QL  +GG L+T SCSG MT S +F +
Sbjct: 304 KFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGVLLTFSCSGLMT-SDLFQK 363

Query: 396 ILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL 440
           I+  AA  A + +  + Q   A DHP+  TYPEG YL     RV+
Sbjct: 364 IIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM 396

[Close]

BLAST of CsaV3_6G013460 vs. Swiss-Prot
Match: sp|C4ZQ93|RLMI_ECOBW (Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rlmI PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-52
Identity = 129/405 (31.85%), Postives = 215/405 (53.09%), Query Frame = 0


Query: 36  KVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMF 95
           ++VL KG+ +      P V+SGAV R+ G+     G+ + + D   K +  G Y+  S  
Sbjct: 4   RLVLAKGREKSLLRRHPWVFSGAVARMEGK--ASLGETIDIVDHQGKWLARGAYSPASQI 63

Query: 96  SVRLMQLEEEAARDPSCTLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLS 155
             R+         DPS ++++      R+  A++ R  L       ++YRL+  E D L 
Sbjct: 64  RARVWTF------DPSESIDI-AFFSRRLQQAQKWRDWLA-QKDGLDSYRLIAGESDGLP 123

Query: 156 GLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELK 215
           G+ ID FG+  V+   +A  E  +A +   ++ +     +  R  V + K+EG+++++  
Sbjct: 124 GITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGP 183

Query: 216 DTSPSTCPERTKVMENDIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCYSG 275
            T     P    + E+ +   + ++ G KTG+Y DQR++R       E ++VL+   Y+G
Sbjct: 184 VTG-ELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTG 243

Query: 276 GFSLNALRGGAINVTGIDSSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNE 335
           GF+++AL GG   V  +D+S  AL++A++NV LN +D  +  F++ D    ++    R E
Sbjct: 244 GFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGE 303

Query: 336 SWDVVILDPPKLAPRKKVLQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQ 395
            +DV+++DPPK    K  L  A   Y+++N LA+QL  +GG L+T SCSG MT S +F +
Sbjct: 304 KFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-SDLFQK 363

Query: 396 ILQGAASTAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL 440
           I+  AA  A + +  + Q   A DHP+  TYPEG YL     RV+
Sbjct: 364 IIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM 396

[Close]

BLAST of CsaV3_6G013460 vs. TrEMBL
Match: tr|A0A1S3C3K0|A0A1S3C3K0_CUCME (ribosomal RNA large subunit methyltransferase I isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496280 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 2.5e-239
Identity = 425/436 (97.48%), Postives = 430/436 (98.62%), Query Frame = 0


Query: 4   LQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII 63
           LQSRLIKSLSISSSPAASTIQEIA+ACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII
Sbjct: 4   LQSRLIKSLSISSSPAASTIQEIATACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRII 63

Query: 64  GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETR 123
           GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAA DPSCTLNVEKMIETR
Sbjct: 64  GRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAASDPSCTLNVEKMIETR 123

Query: 124 VHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE 183
           +HTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE
Sbjct: 124 IHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIE 183

Query: 184 DCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEGQK 243
           DCVRGIEEINHVKWRPSVDILKEEGIDVSELK+TSPSTCPERTKV EN IFY ISLEGQK
Sbjct: 184 DCVRGIEEINHVKWRPSVDILKEEGIDVSELKETSPSTCPERTKVKENGIFYTISLEGQK 243

Query: 244 TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE 303
           TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE
Sbjct: 244 TGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKE 303

Query: 304 NVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYRNL 363
           NVVLNSMDPERISFLKADATAFMKDALSRNESWD+VILDPPKLAPRKKVLQTASGMYRNL
Sbjct: 304 NVVLNSMDPERISFLKADATAFMKDALSRNESWDIVILDPPKLAPRKKVLQTASGMYRNL 363

Query: 364 NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDP 423
           NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAAS AKKKITVLR AGAACDHPIDP
Sbjct: 364 NSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASMAKKKITVLRPAGAACDHPIDP 423

Query: 424 TYPEGAYLSNILLRVL 440
           +YPEGAYLSNILLRVL
Sbjct: 424 SYPEGAYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. TrEMBL
Match: tr|A0A0A0KB85|A0A0A0KB85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G135980 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 6.4e-219
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 53  MVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSC 112
           MVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSC
Sbjct: 1   MVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSC 60

Query: 113 TLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSA 172
           TLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSA
Sbjct: 61  TLNVEKMIETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSA 120

Query: 173 AWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMEND 232
           AWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMEND
Sbjct: 121 AWVEKYKAEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMEND 180

Query: 233 IFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGID 292
           IFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGID
Sbjct: 181 IFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGID 240

Query: 293 SSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKV 352
           SSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKV
Sbjct: 241 SSLPALELAKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKV 300

Query: 353 LQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQ 412
           LQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQ
Sbjct: 301 LQTASGMYRNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQ 360

Query: 413 AGAACDHPIDPTYPEGAYLSNILLRVL 440
           AGAACDHPIDPTYPEGAYLSNILLRVL
Sbjct: 361 AGAACDHPIDPTYPEGAYLSNILLRVL 387

[Close]

BLAST of CsaV3_6G013460 vs. TrEMBL
Match: tr|M5WGM9|M5WGM9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G128300 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 3.3e-199
Identity = 344/439 (78.36%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MQLLQSRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVD 60
           MQ L +RL+KSLS +S P  +T+QE+ASA PKG+A+VVLKKGK QLFKDGSPMVYSGAVD
Sbjct: 1   MQHLPARLVKSLSATSLPCTTTLQELASAHPKGVARVVLKKGKTQLFKDGSPMVYSGAVD 60

Query: 61  RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMI 120
           RIIGRPPP++GD+VLVADG EKPIGWG+YNSVSMF VRLMQLEEEA RD SC LN+EK++
Sbjct: 61  RIIGRPPPRSGDIVLVADGAEKPIGWGMYNSVSMFCVRLMQLEEEATRDLSCALNMEKLL 120

Query: 121 ETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKA 180
           ETR++ A ELRK+LGLPSASTNA+RLVNSEGDRLSGLI+DVFGD+AV+ASSAAWVEKYK 
Sbjct: 121 ETRINEAIELRKSLGLPSASTNAFRLVNSEGDRLSGLIVDVFGDVAVIASSAAWVEKYKP 180

Query: 181 EIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLE 240
           E+E  V  I+EIN++ WRPS ++LKEEG+D S  K+  PS CP+RTKV EN IFYAISLE
Sbjct: 181 EVEASVGRIDEINYINWRPSSEVLKEEGLDASNYKERDPSICPQRTKVTENGIFYAISLE 240

Query: 241 GQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALEL 300
           GQKTGFYADQRENR FISTIS+GQ+VLD+ CYSGGF+LNA RGGA+NV G+DSSLPA+EL
Sbjct: 241 GQKTGFYADQRENRQFISTISDGQRVLDMFCYSGGFALNAARGGAVNVIGVDSSLPAVEL 300

Query: 301 AKENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMY 360
           AKEN+VLN+MDP RI+FL+ DA+ FMK ALSRNESWD+VILDPPKLAPRKK LQ ASGMY
Sbjct: 301 AKENIVLNNMDPGRITFLREDASEFMKGALSRNESWDIVILDPPKLAPRKKALQNASGMY 360

Query: 361 RNLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHP 420
           RNLNSLAMQLT++GG LMTCSCSGAMTQSGMFL+ILQGAAS A +KIT+LR+AGAACDHP
Sbjct: 361 RNLNSLAMQLTKRGGLLMTCSCSGAMTQSGMFLRILQGAASAAGRKITILREAGAACDHP 420

Query: 421 IDPTYPEGAYLSNILLRVL 440
           IDP+YPEG YLSNILLRVL
Sbjct: 421 IDPSYPEGKYLSNILLRVL 439

[Close]

BLAST of CsaV3_6G013460 vs. TrEMBL
Match: tr|V4S9J8|V4S9J8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10004974mg PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 4.3e-199
Identity = 341/434 (78.57%), Postives = 398/434 (91.71%), Query Frame = 0


Query: 6   SRLIKSLSISSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGR 65
           +RL+KSLS+SS PA S +Q+IAS+ PKG+AKVVLKKGK QLFK+GSPMVYSGAVDRIIGR
Sbjct: 10  ARLVKSLSLSSLPATSNLQQIASSQPKGVAKVVLKKGKTQLFKNGSPMVYSGAVDRIIGR 69

Query: 66  PPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIETRVH 125
           PPP+TGDVVLV DGTEKPI WGLYNSVSMF VRLMQL+EE  RDPSC LN+E+++E R+ 
Sbjct: 70  PPPRTGDVVLVTDGTEKPIAWGLYNSVSMFCVRLMQLDEEVPRDPSCALNMERLLEMRID 129

Query: 126 TARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDC 185
            A ELR  LGLPSA+TNAYRLVNSEGDRLSGLI+DVFG+ AV+ASSAAWVEK+K EIE  
Sbjct: 130 AAIELRWRLGLPSANTNAYRLVNSEGDRLSGLIVDVFGESAVIASSAAWVEKHKPEIEAN 189

Query: 186 VRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEGQKTG 245
           +R + +I H+KWRPSV+ILKEEG+D+S+LK+T PST PERTKV+EN I YAIS+EGQKTG
Sbjct: 190 IRKVCDIKHIKWRPSVEILKEEGLDLSDLKETDPSTYPERTKVLENGISYAISMEGQKTG 249

Query: 246 FYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELAKENV 305
           FYADQRENR FISTIS GQKVLD+CCYSGGFSL+A+RGGA+NVTG+D+SLPA+ELA+EN+
Sbjct: 250 FYADQRENRQFISTISSGQKVLDICCYSGGFSLSAIRGGAVNVTGVDTSLPAVELARENI 309

Query: 306 VLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYRNLNS 365
           VLN++DPERI+FL+ DAT +M+ AL+RNESWD+VILDPPKLAPR+K LQ+ASGMYRNLNS
Sbjct: 310 VLNNVDPERITFLREDATEYMRHALARNESWDIVILDPPKLAPRRKDLQSASGMYRNLNS 369

Query: 366 LAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPIDPTY 425
           LAMQLT++GGFLMTCSCSGAMTQSGMFL+ILQGAAS A+KKITV+RQAGAACDHP+DP+Y
Sbjct: 370 LAMQLTKRGGFLMTCSCSGAMTQSGMFLRILQGAASMAQKKITVVRQAGAACDHPVDPSY 429

Query: 426 PEGAYLSNILLRVL 440
           PEG YLSNILLRVL
Sbjct: 430 PEGTYLSNILLRVL 443

[Close]

BLAST of CsaV3_6G013460 vs. TrEMBL
Match: tr|B9HYB4|B9HYB4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G173800v3 PE=4 SV=2)

HSP 1 Score: 701.4 bits (1809), Expect = 1.3e-198
Identity = 345/438 (78.77%), Postives = 395/438 (90.18%), Query Frame = 0


Query: 4   LQSRLIKSLSISSSPA--ASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAVDR 63
           L +RLIKSL ISS P+  +ST+Q+IAS+  KG+AKVVLKKGK QLFKDGSPMVYSGAVDR
Sbjct: 6   LSARLIKSLPISSLPSTPSSTLQQIASSHSKGIAKVVLKKGKTQLFKDGSPMVYSGAVDR 65

Query: 64  IIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKMIE 123
           IIGRPPPKTGD+VLVADGTEKPIGWGLYNSVSMF VRLMQLEEEA RDPSC L+++K++E
Sbjct: 66  IIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEEATRDPSCALDMKKLLE 125

Query: 124 TRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAE 183
           TR + A ELR+ LGLPS+ TNAYRLVNSEGDRLSGLI+DVFGDLAV+ASSAAWVE YK E
Sbjct: 126 TRTNAAIELRRRLGLPSSHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSAAWVENYKPE 185

Query: 184 IEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISLEG 243
           +E C+  I+ INH+ WRPSVDILKEEG+DVS++K+  PSTCPER KVMEN I YAISL G
Sbjct: 186 VEACINRIDGINHINWRPSVDILKEEGMDVSDMKEVHPSTCPERIKVMENGISYAISLVG 245

Query: 244 QKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTGIDSSLPALELA 303
           QKTGFYADQRENR FISTIS GQKVLD+CCYSGGF+LNA  GGAI+VTG+D+S+PALELA
Sbjct: 246 QKTGFYADQRENRQFISTISNGQKVLDICCYSGGFALNAAHGGAIDVTGVDTSMPALELA 305

Query: 304 KENVVLNSMDPERISFLKADATAFMKDALSRNESWDVVILDPPKLAPRKKVLQTASGMYR 363
           +EN+VLN++DP RISFL+ DA  FMK ALSRNESWD+VILDPPKLAPRKKVLQ ASGMYR
Sbjct: 306 RENIVLNNLDPGRISFLREDAIQFMKGALSRNESWDIVILDPPKLAPRKKVLQNASGMYR 365

Query: 364 NLNSLAMQLTRKGGFLMTCSCSGAMTQSGMFLQILQGAASTAKKKITVLRQAGAACDHPI 423
           N+NS+A++LT++GG LMTCSCSGAMTQSGMFL++LQGAAS A +KI+VLR+AGAA DHPI
Sbjct: 366 NMNSMALRLTKRGGLLMTCSCSGAMTQSGMFLRVLQGAASMAGRKISVLREAGAASDHPI 425

Query: 424 DPTYPEGAYLSNILLRVL 440
           DP+YPEGAYLSNILLRVL
Sbjct: 426 DPSYPEGAYLSNILLRVL 443

The following BLAST results are available for this feature:

BLAST of CsaV3_6G013460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139905.1	4.2e-246	100.00	PREDICTED: uncharacterized protein LOC101215914 isoform X1 [Cucumis sativus]	[more]
XP_011656974.1	9.6e-243	96.06	PREDICTED: uncharacterized protein LOC101215914 isoform X3 [Cucumis sativus]	[more]
XP_008456287.1	3.8e-239	97.48	PREDICTED: ribosomal RNA large subunit methyltransferase I isoform X1 [Cucumis m...	[more]
XP_023512212.1	2.5e-230	92.94	uncharacterized protein LOC111777007 [Cucurbita pepo subsp. pepo]	[more]
XP_022943486.1	3.2e-230	92.94	uncharacterized protein LOC111448241 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G013460 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54310.2	2.8e-188	73.62	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of CsaV3_6G013460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B4RRY8\|RLMI_ALTMD	5.5e-56	34.73	Ribosomal RNA large subunit methyltransferase I OS=Alteromonas mediterranea (str...	[more]
sp\|Q6LQ36\|RLMI_PHOPR	4.3e-53	34.17	Ribosomal RNA large subunit methyltransferase I OS=Photobacterium profundum (str...	[more]
sp\|Q3IKJ0\|RLMI_PSEHT	5.7e-53	32.19	Ribosomal RNA large subunit methyltransferase I OS=Pseudoalteromonas haloplankti...	[more]
sp\|B1LJ30\|RLMI_ECOSM	9.7e-53	31.85	Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain SMS-...	[more]
sp\|C4ZQ93\|RLMI_ECOBW	1.3e-52	31.85	Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain K12 ...	[more]

BLAST of CsaV3_6G013460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3K0\|A0A1S3C3K0_CUCME	2.5e-239	97.48	ribosomal RNA large subunit methyltransferase I isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0KB85\|A0A0A0KB85_CUCSA	6.4e-219	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G135980 PE=4 SV=1	[more]
tr\|M5WGM9\|M5WGM9_PRUPE	3.3e-199	78.36	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G128300 PE=4 SV=1	[more]
tr\|V4S9J8\|V4S9J8_9ROSI	4.3e-199	78.57	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10004974mg PE=4 ...	[more]
tr\|B9HYB4\|B9HYB4_POPTR	1.3e-198	78.77	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G173800v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases
IPR015947	PUA-like_sf
IPR019614	SAM-dep_methyl-trfase
IPR036974	PUA_sf
IPR002478	PUA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G013460.1	CsaV3_6G013460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 35..115 e-value: 4.1E-11 score: 52.9
IPR002478	PUA domain	PROSITE	PS50890	PUA	coord: 34..111 score: 8.595
IPR036974	PUA domain superfamily	GENE3D	G3DSA:2.30.130.10		coord: 34..105 e-value: 3.4E-18 score: 67.0
None	No IPR available	GENE3D	G3DSA:3.30.750.80		coord: 116..216 e-value: 6.9E-18 score: 66.5
None	No IPR available	GENE3D	G3DSA:3.40.50.150		coord: 226..439 e-value: 5.7E-69 score: 233.8
None	No IPR available	PANTHER	PTHR42873	FAMILY NOT NAMED	coord: 35..438
None	No IPR available	CDD	cd11572	RlmI_M_like	coord: 120..213 e-value: 1.66451E-23 score: 93.296
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 265..380 e-value: 4.86603E-13 score: 64.3734
IPR019614	S-adenosylmethionine-dependent methyltransferase	PFAM	PF10672	Methyltrans_SAM	coord: 224..393 e-value: 1.9E-17 score: 63.3
IPR015947	PUA-like superfamily	SUPERFAMILY	SSF88697	PUA domain-like	coord: 36..104
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 123..434

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G013460	CSPI06G11020	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G013460	Cucsa.118570	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G013460	CmaCh20G002870	Cucurbita maxima (Rimu)	cmacucB0677
CsaV3_6G013460	CmoCh20G003090	Cucurbita moschata (Rifu)	cmocucB0660
CsaV3_6G013460	Cp4.1LG16g07070	Cucurbita pepo (Zucchini)	cpecucB0349
CsaV3_6G013460	CsGy6G011180	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G013460	Carg03418	Silver-seed gourd	carcucB0370
CsaV3_6G013460	Cla013451	Watermelon (97103) v1	cucwmB549
CsaV3_6G013460	MELO3C019630	Melon (DHL92) v3.5.1	cucmeB432
CsaV3_6G013460	ClCG02G018710	Watermelon (Charleston Gray)	cucwcgB470
CsaV3_6G013460	Lsi10G015120	Bottle gourd (USVL1VR-Ls)	cuclsiB430
CsaV3_6G013460	MELO3C019630.2	Melon (DHL92) v3.6.1	cucmedB437
CsaV3_6G013460	Cla97C02G044650	Watermelon (97103) v2	cucwmbB459
CsaV3_6G013460	Bhi10G000730	Wax gourd	cucwgoB618

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G013460	Cucumber (Chinese Long) v3	cuccucB215
CsaV3_6G013460	Silver-seed gourd	carcucB0568
CsaV3_6G013460	Silver-seed gourd	carcucB1108
CsaV3_6G013460	Cucumber (Gy14) v2	cgybcucB345
CsaV3_6G013460	Cucumber (Gy14) v1	cgycucB360
CsaV3_6G013460	Cucurbita maxima (Rimu)	cmacucB0633
CsaV3_6G013460	Cucurbita maxima (Rimu)	cmacucB0756
CsaV3_6G013460	Cucurbita moschata (Rifu)	cmocucB0618
CsaV3_6G013460	Cucurbita moschata (Rifu)	cmocucB0742
CsaV3_6G013460	Cucurbita pepo (Zucchini)	cpecucB0317
CsaV3_6G013460	Cucurbita pepo (Zucchini)	cpecucB0922
CsaV3_6G013460	Wild cucumber (PI 183967)	cpicucB410
CsaV3_6G013460	Bottle gourd (USVL1VR-Ls)	cuclsiB452
CsaV3_6G013460	Melon (DHL92) v3.5.1	cucmeB467
CsaV3_6G013460	Melon (DHL92) v3.6.1	cucmedB457
CsaV3_6G013460	Watermelon (Charleston Gray)	cucwcgB441
CsaV3_6G013460	Watermelon (97103) v1	cucwmB472
CsaV3_6G013460	Watermelon (97103) v2	cucwmbB528
CsaV3_6G013460	Wax gourd	cucwgoB580