CsaV3_6G013020 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G013020
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	expansin-B3
Location	chr6 : 9119830 .. 9125441 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACGAGGGCCATTTTTGTAATTAATGGAAATATCAGCGGTCCATTTGATAGCCCCCTTACACTTTTTTATATTTACTTAACGGCCCCCTTCCACTTCCACAGCTCCAACTGCAACATCATACTCAAACCGTCTCTCACGCACTGCACAATCCTCTCACTCAACTGTTTTTTCTCCATCACCCTCCTCCTCGCCCGAACCTCACTTTCTCGTCACCTCCACACACCCAAATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTACGCCCCTTCCATTTCCCTACATTTTCTTTGTTTTAGGGTCTCTAAAGTTTATGGGTCTGCTCTGTTTCTTTTGAAATACTATCTCCAGCTTTCCTTTAAAATGTGTTTACAAGGGTTTGAATTAACAGAAACCCACTTCACAAATCACTTCTACCCAGCCCTAATTTCGCTTTTTATTACTTCTTTGCTGCTACAAATTAAGGGATCTGACAATGTGAAGTCACAGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGGTACAAATTCGTTACAACTCTGTTTTTTTTTTTTTTTTTATTCTTTTTTGTCACATTATGATTTGTTTCTTTCTTTCTTTTTATCTATCTCTGCTTTGTATTTTGTCGCTTATTTTTAGTTGCCCTAAATGTGTAGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAGTAAGAAGAACACCCTTTACTCATGTAAAGCATAATATTCCATTGGTTAAATTACAATATTTTAAGATGTGAAAAGATAGAAAAAGCTGGTACTTAATTACTCGTTGAAAGTTGAATATCCGAGCGGAAGAATCTTTGAAAAAGAAGTATCTTTATTAGAAGAAAAAGCGTGGGGTTTTCCCACATGATTATAAAAAAATCTCATTCATATTGACAAAGGAATACTAGTGATATGAGTTAATATTTGTGTTTTGGCAGACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACATACACTTCCCGCCTTAAATTCTTCACTTAATGAAGAAGAGAAAAAAGCAGCAGTTTTTTTTTTTTTCTTCTCTTTTGGAGGTTTGAGAAAAGAAAAGGCATATTAGGAAGAAAAGCATATTTAGTTGCTTTTTGTTCTATGCCTAAAGGGAGGGGGAGGGGAAGTGTTAGTAGAAAAAGTAGCCGTTATCCGTTATCTTTAGTAGAAAAAAGTGACCGTTGGAGTGCGAAATGGCATCCAATGAATGAGTTGAGTGAGTGTGGTGTGTGATGTGTGGTGTGTGTGTGTGTGTGTGTGGGATATTGAGAATATTTATATAGCAGCCCAGCCCTCTCCAAAAGTGGAGAGAGAGCGTGGGGGGGTGTTTGTTGTAGTGTGTTATTTAATGATCAACTTGTTTCTTTACTTTGTTTAATCTAACTTTTGGACTCTTTGGTCAAACTATGTTCATTTAAATAGAGGCCCATACAGCTGGATTTCAGCTCGGGTCCTTGGTTACAGTGTCCATTGCTTTTAGTTTAATCTTGGTGTTGTTTTTCTATTGTATCCTCAAATCTCGCTTTTTATTAACATTATACTTCACACCAGGCGCTCCCCCAGTCTGAATTTACATCATAGAACATTTTTAAATGACTTTGTAGACCTAGATATTGTTTCAGACAAAGGCACTGTGCTTGATGGCCTATCAACTAATAACTTGCTAGCTTATGACCTATCTCCTAATAAATTGCTACTTCCTGGCTTGGCCTTGTATTACATCTTGATAGATCTTAATAATCCTAGTTGGTGGCTCCATATCTTTAATACAATTAGTTAATGTAAACTTAGTCTTACCTGACCTTCTGTTCATTTGGACTCTTAATCCCATTTCAATTCCATATGTTACTTCCAATCCAACAAACCAACCATTATGTGTGTTGAATCTCTCATTTCTCTCTGGTATATACATGTATATGTATATACAACCGTCATGCTTGAATACAGTGCACTCATCACTGTATGGTTGACAAGATGTACACAGATGAGTGCAACCAAAATGCATCCATTCCCAACCATTTTCCTTTCCTCCTTCCTTAGAATGTTACCCGGGTTGGTTGAACTCCCCGTAGTGTTAAAAGGGGAGAATAAATAGATGGTCAAACTGCTCACCCCTGGGGCAGCTATTCTATTCCTAGTGATTGGTTCAATAACCATTACTACTCGTGAATATTCCCTAGGATAATTAATTATGTGTGACAAATAACATGAGCTGCTCTACTACAACTTTGCAAGTCTGTATTATTACCTTTTCTATCATCTGTAACAAAAGGAGTATATAAGAGAAGCTCAGTCTCGAAGAGATGATAATAAAATTCAATGACAAATCGGCCTAAATTCTAAGTCTCAACAAGAGAGCTGTCAAATCCCACGCTGCAGGGAATGCAAAGCAGCATGGCCATAACGAAAGCTTCCTCCTTATTCCCTGTGATAAATTGTGAACAGAGAAAAATAATCATTCAGTTACAATAAAACATAAGATGAAGTATTAATAATTTCTTACTCTGCAGAAGGTGACACCAACAGAACTGCTTGTTCGGCATCAGCAACAGGAGGAGGAGGAGCCTCAACCTCTATTATGGGTTGATCAGGAGTGCCATTGGCATCCATATTTATTGCTGGAGAAGTAGGTGTGAGAACTGTAGCTGGTGAAGAAGCTTTCTTCTCATCAACTTCCTTCCCTTCTTCCTTAGAATCTTTGGTTTCTGTCCCTTCACTTGCTTCCTTTCCACCTTTGTTCTCCGTCCCTTCCTTTGTATCTTTTCCATCCTTGCTATCCTTTCCATCCTTGCCACCTTCTCCATCTTTGCCATCTTTGCCATCCTTTTCATCTTTGGCCGGTTTGGGTGGAGGAGGCATCATATGAGGTGGAGGAGTCTGTTTCAACTTCAACAAGATCTGCCTCAATCGTGCTAGATCGGTTGGCTTTCCAGGTTTTGGACCCTGAACGACCAATATTGAAGGCTTCTTGTCAGGATCTTTCTTTCCTCTTCTCTTCTCAATATTAGGTACCTCACGCGGGATGATCTCTGCAATTGCTTTCCAGTAATGTTTGTCAGCTTCTTTGTGGAATCTTTCCTGGTTAGCATGGTAAAGCTGGAAAAGATTTGAAAAATAAGTAACAATACATAGCAAGAAGGCATTGATAGGATGCAGGGTAAAGAAGATCAGTGTATACACAATGCTTTCAGAGGTTTCACCTTCTCTCTTTCTCTATTGTGAGCCTTATTTGTTTCACAATTGACCCTCCTTTTCTCATAAAAGGATGCTTTATACTCTTCAGCTTCATTAATTATTTGATTCCTCATCTCCTTTTCTTTCTTCTCTTTGTCCTCAAGATCTATGGCATTTTGACTGCACTATAAAGTTTTCAGATTAATAGCAAATAGCTAAGAACAGATTAAAAAAGATGAGAAACCAATTTCTCTTGAAATTAAGAGATAAAAGAGAAATATGGTTCCAAAACAATTCCCATTCCACCTCATCTGACTTAGATTGTGCAACAAGACAGAAAATTCAAAATGATCACAGCCCAACCTTTACAATTAGCCAAGGATTAAAAGAAATTCCAAGACCAATGTAACCTGGGTAACCATTACGACCCTGCAACTTGAAAATTGAAACTACTGTGGCCCATGAAGCCAGCTAACAAAAATGATGCGTAATAGAGATAAGAATTTTGCACAGTATCAAACTTCCCAATGAATCAGATAAAAACTTCTTCAAGCAGACAGAATTAAGCGTAGCCCTTTTTTCTGTTCCCATAGATATATTACATAAAATACTATAAAAAAACTTGTATATAATTGGTCTTACTAATATGTTGGACGTTTATGCAAACACGTGATGTTAGGACAAATCTGCAACCAATATTTGTCTTGTACCAGGCACAGGACTACAATATTTGAACATTCCAGTATCAGACAGAAAGTAAATGACAATAAACAAATACACCAACATATTTAATATCATATATGTCGCAACAAATGACTAACTATTCATAGTTCCTTACAAAAATTTCTCCAGTAATGAATCCAATCAGTGAAAGTCACAATAAACACGATCTATATAGATCATGAGACTACGCACGCATGAGATTAGCGGGTTGAAAGTTAGAAACAAAGAAGATTTGAACCTCCGTCTGCACTCACAATTTAGGCTATTGGGTAAACTTCTTCCTGTCACTATGAAGAGAATGGAAAATCTCAAGACATTCCATTTCAATCTCCAGCTCAAAAATGAACCCACCAAGGAAACATTTCATTCCTTCCCAAAATGATAAAATCACAGATCTAAAAGCACTCCAATCTCTCAAGAAGAAGAAAAAATTAACGGTAATAAAAAAAAAAAAAAAAAACGTACCGTCGCCATTCGCGTCGAGCATTGCCTTCCTCCCGCATTTCACTGGGGTCGGGGAGAACCGGTCCATCAGAGGCAAAAAGACCACCATCGTCAAAAGCACCACCACCAACGGCGGGAGCGGCGGCATTGTCATGGTCTGCATCAGCGTCAGCAGAATGAAAGGGAGATACATAGTCAGGATTAGGATTAGAAACTCCAAAGTCGTAAGCGTCAGACAAATTGGGATTAGTGGTATTTCCAGGAGAGTGGATGTCGGAAATGACGTTATCTTCGAAAAAGGAAGGGGGAGGTTGAGGTTGGTGGTCGGGGGAGGAAATATCGTGGGAGGGAGAGAAAGGGGTTGAAGAGTCGTATGGTTGAGAGGGGAGAGTAGAGTCAAAAGCCATGTAGGCATCATCATCAAAGGGTTGGTCTGTAGGGGAATGGTGGTGGTGGTGGTGTTCGTGTTCGTGTTCTTCGTTGGTGAAGGTGTCGAAGGAAGCCATTGTTGAGAAATGTGGTTGTCTCCCTCCGTGAATTGGAAAATTGCTGAGTTTGTTGAGGTTTAGGGAGTTGTTGCGGTGACGATGAACGCAGTGTTC

mRNA sequence

ATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACATACACTTCCCGCCTTAAATTCTTCACTTAA

Coding sequence (CDS)

ATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACATACACTTCCCGCCTTAAATTCTTCACTTAA

Protein sequence

MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKFFT

Homology

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BLAST of CsaV3_6G013020 vs. NCBI nr
Match: XP_004139938.1 (PREDICTED: expansin-B3 [Cucumis sativus] >KGN46748.1 hypothetical protein Csa_6G128580 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 5.6e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGRTLSARDIIPRNWSPKATYTSRLKFFT
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

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BLAST of CsaV3_6G013020 vs. NCBI nr
Match: XP_008448283.1 (PREDICTED: expansin-B3 [Cucumis melo])

HSP 1 Score: 543.9 bits (1400), Expect = 3.1e-151
Identity = 254/269 (94.42%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M LFLH  +FRLITA FSAAALL W  AAA LQH +PDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGR LSARDIIPRNWSPKATYTSRL FFT
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

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BLAST of CsaV3_6G013020 vs. NCBI nr
Match: XP_022986016.1 (expansin-B3-like [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 3.3e-145
Identity = 244/269 (90.71%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M L LH   FRL+ A F AAA+L WF A A LQH V DLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD+NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE  SGEW+DMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGR+LSARDIIPRNWSPKATYTSRL FF+
Sbjct: 241 TGRSLSARDIIPRNWSPKATYTSRLNFFS 269

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BLAST of CsaV3_6G013020 vs. NCBI nr
Match: XP_023512091.1 (expansin-B3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519.2 bits (1336), Expect = 8.2e-144
Identity = 244/270 (90.37%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M L LH   FRL+ A F AAA+L WF A A LQH V DLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD+NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           STGR+LSARDIIPRNWSPKATYTSRL FF+
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 270

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BLAST of CsaV3_6G013020 vs. NCBI nr
Match: XP_022943728.1 (expansin-B3-like [Cucurbita moschata])

HSP 1 Score: 516.5 bits (1329), Expect = 5.3e-143
Identity = 242/270 (89.63%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M L LH   FR++ A F AAA+L WF+A A LQH V DLHWLPATATWYGSPEGDGSDGG
Sbjct: 5   MHLLLHCRGFRIVRALFCAAAVLEWFSATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 64

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGN VDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD+NICSRRAVTIIVTDECPG
Sbjct: 65  ACGYGNSVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 124

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 125 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 184

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 185 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 244

Query: 241 STGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           STGR+LSARDIIPRNWSPKATYTSRL FF+
Sbjct: 245 STGRSLSARDIIPRNWSPKATYTSRLNFFS 274

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BLAST of CsaV3_6G013020 vs. TAIR10
Match: AT4G28250.1 (expansin B3)

HSP 1 Score: 411.4 bits (1056), Expect = 4.4e-115
Identity = 186/246 (75.61%), Postives = 212/246 (86.18%), Query Frame = 0


Query: 22  LLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVS 81
           LL   +A A     V + HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+
Sbjct: 17  LLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76

Query: 82  PVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMA 141
           P+LF+NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+A
Sbjct: 77  PILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLA 136

Query: 142 IAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQ 201
           IAGE G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M 
Sbjct: 137 IAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMH 196

Query: 202 IKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATY 261
           I++  + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY
Sbjct: 197 IRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATY 256

Query: 262 TSRLKF 268
           +SRL F
Sbjct: 257 SSRLNF 260

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BLAST of CsaV3_6G013020 vs. TAIR10
Match: AT2G20750.1 (expansin B1)

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 0


Query: 31  HLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEG 90
           H    V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEG
Sbjct: 30  HSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEG 89

Query: 91  CGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIAGEGGQL 150
           CGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +
Sbjct: 90  CGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVI 149

Query: 151 RNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGE 210
           RNRG + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S E
Sbjct: 150 RNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKE 209

Query: 211 WLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           W+ M H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRL F
Sbjct: 210 WISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of CsaV3_6G013020 vs. TAIR10
Match: AT1G65680.1 (expansin B2)

HSP 1 Score: 250.8 bits (639), Expect = 9.9e-67
Identity = 111/232 (47.84%), Postives = 157/232 (67.67%), Query Frame = 0


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+V
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ +
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHL 217
           +Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 218 WGANWCI-IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           WGA W + +  PL+ P S+R+T+L +G+T+ A ++IP NW P A Y S + F
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of CsaV3_6G013020 vs. TAIR10
Match: AT2G45110.1 (expansin B4)

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 44  ATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHN 103
           A  TWYG P G GS GGACGYG+ V   PL A V A  P LF NG+GCG CY+V C+ H 
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 104 ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTP 163
            CS   +T+ +TDECPGG C++   H DLSG A G +A  G+  QLR+ G I V Y+R  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 164 CKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCI 223
           C Y G NI F ++ G+  Y++S +VE+E+GDGD+  ++I+    G ++ M  +  A W +
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPA-GGSFISMQEMRSAVWKV 215

Query: 224 -IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
             G  L+GPF++RLT+  + + + A ++IP NW P  +Y S + F
Sbjct: 216 NSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

[Close]

BLAST of CsaV3_6G013020 vs. TAIR10
Match: AT3G60570.1 (expansin B5)

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54
Identity = 97/229 (42.36%), Postives = 146/229 (63.76%), Query Frame = 0


Query: 40  HWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKC 99
           HW  A  TWYG  EG G+ GGACGYG+ V   P +  V A  P LF++G+GCGACY++KC
Sbjct: 33  HWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKC 92

Query: 100 LDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIY 159
            DH +C+++ + ++++DECPG  C+  + HFDLSG AFG +A  G+G QLRN GE+  + 
Sbjct: 93  -DHPLCTKKPIKVMISDECPG--CTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKTM- 152

Query: 160 RRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGA 219
                      IA HV+ G+  Y++S  V+F +GDG+   ++++    G+++ M  +  A
Sbjct: 153 -----------IAIHVDAGANPYYMSFAVKFANGDGNFACIEVQPA-GGQYMKMEEMRSA 212

Query: 220 NWCIIGG-PLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
            W +  G PLKGPF++RLT+  +G+ + A+ +IP  WSP A Y S++ F
Sbjct: 213 VWRLSPGVPLKGPFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNF 245

[Close]

BLAST of CsaV3_6G013020 vs. Swiss-Prot
Match: sp|Q9M0I2|EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 7.9e-114
Identity = 186/246 (75.61%), Postives = 212/246 (86.18%), Query Frame = 0


Query: 22  LLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVS 81
           LL   +A A     V + HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+
Sbjct: 17  LLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76

Query: 82  PVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMA 141
           P+LF+NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+A
Sbjct: 77  PILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLA 136

Query: 142 IAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQ 201
           IAGE G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M 
Sbjct: 137 IAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMH 196

Query: 202 IKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATY 261
           I++  + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY
Sbjct: 197 IRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATY 256

Query: 262 TSRLKF 268
           +SRL F
Sbjct: 257 SSRLNF 260

[Close]

BLAST of CsaV3_6G013020 vs. Swiss-Prot
Match: sp|Q0DZ85|EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-110
Identity = 184/256 (71.88%), Postives = 211/256 (82.42%), Query Frame = 0


Query: 12  LITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVK 71
           L  +  SAA +    +  A   H V D  W PATATWYGS +GDGSDGGACGYG LVDV 
Sbjct: 18  LFVSLLSAAFVFD--SGEAGAAHRVVDPEWHPATATWYGSADGDGSDGGACGYGTLVDVV 77

Query: 72  PLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFD 131
           P+K RVGAVSPVLF+ GEGCGACYKV+CLD +ICSRRAVT+IVTDECPGG C+ G THFD
Sbjct: 78  PMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFD 137

Query: 132 LSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFE 191
           LSGAAF R+A+AG GGQL+NRGEI V+YRRT CKY GKNIAFHVNEGST +WLSLLVEFE
Sbjct: 138 LSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFE 197

Query: 192 DGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDII 251
           DGDGDIG+MQ+K+ NS +W DM H+WGA W +  GPL GPFSVRLTTL+T +TLSA+D+I
Sbjct: 198 DGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVI 257

Query: 252 PRNWSPKATYTSRLKF 268
           P+NW+PKATYTSRL F
Sbjct: 258 PKNWTPKATYTSRLNF 271

[Close]

BLAST of CsaV3_6G013020 vs. Swiss-Prot
Match: sp|Q7X6J9|EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-110
Identity = 177/230 (76.96%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D+ W PATATWYG  EGDGS GGACGYG+LVDV P+KARVG+VSPVLF++GEGCGACYKV
Sbjct: 45  DMEWRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKV 104

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KCLDH ICSRRAVT+IVTDECPGG C+ G THFDLSGAAF RMA+AG GG LR+RG++ V
Sbjct: 105 KCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSV 164

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLW 217
           +YRRT CKY GKNIAF VNEGST++WLSLLVEFEDG GDIG+MQIK+ NS EWLDM H+W
Sbjct: 165 VYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVW 224

Query: 218 GANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           GA WC++ GPL GPFSVRLTTLS  + L+ARD+IPRNW P ATYTSRL F
Sbjct: 225 GATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSRLNF 274

[Close]

BLAST of CsaV3_6G013020 vs. Swiss-Prot
Match: sp|Q9SKU2|EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.8e-103
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 0


Query: 31  HLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEG 90
           H    V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEG
Sbjct: 30  HSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEG 89

Query: 91  CGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIAGEGGQL 150
           CGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +
Sbjct: 90  CGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVI 149

Query: 151 RNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGE 210
           RNRG + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S E
Sbjct: 150 RNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKE 209

Query: 211 WLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           W+ M H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRL F
Sbjct: 210 WISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of CsaV3_6G013020 vs. Swiss-Prot
Match: sp|Q9SHY6|EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-65
Identity = 111/232 (47.84%), Postives = 157/232 (67.67%), Query Frame = 0


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+V
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ +
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHL 217
           +Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 218 WGANWCI-IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           WGA W + +  PL+ P S+R+T+L +G+T+ A ++IP NW P A Y S + F
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of CsaV3_6G013020 vs. TrEMBL
Match: tr|A0A0A0KB42|A0A0A0KB42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128580 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 3.7e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGRTLSARDIIPRNWSPKATYTSRLKFFT
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

[Close]

BLAST of CsaV3_6G013020 vs. TrEMBL
Match: tr|A0A1S3BJY6|A0A1S3BJY6_CUCME (expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 2.1e-151
Identity = 254/269 (94.42%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M LFLH  +FRLITA FSAAALL W  AAA LQH +PDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGR LSARDIIPRNWSPKATYTSRL FFT
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of CsaV3_6G013020 vs. TrEMBL
Match: tr|B9RW20|B9RW20_RICCO (Beta-expansin 3, putative OS=Ricinus communis OX=3988 GN=RCOM_1175460 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 9.3e-128
Identity = 209/246 (84.96%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 23  LHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSP 82
           L  F     + H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKPLKARVGAVSP
Sbjct: 12  LKCFVVYGQVHHRVTDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLKARVGAVSP 71

Query: 83  VLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI 142
           +LF+NGEGCGACYKVKCLD +ICSRRAVTIIVTDECPGGYCSNG THFDLSGAAFGRMAI
Sbjct: 72  ILFKNGEGCGACYKVKCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAI 131

Query: 143 AGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQI 202
            GE GQLRNRGE+PV YRRTPCKYPGKNIAFHVNEGST+YWLSLLVEFEDGDGD+G+M I
Sbjct: 132 TGESGQLRNRGELPVTYRRTPCKYPGKNIAFHVNEGSTNYWLSLLVEFEDGDGDVGSMHI 191

Query: 203 KETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYT 262
           +E    EWL+MNHLWGANWCIIGGPLKGPFSV+LTTLSTGR LSARD+IPRNWSPKATYT
Sbjct: 192 REAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRGLSARDVIPRNWSPKATYT 251

Query: 263 SRLKFF 269
           SRLKF+
Sbjct: 252 SRLKFY 257

[Close]

BLAST of CsaV3_6G013020 vs. TrEMBL
Match: tr|U5FIY0|U5FIY0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G101900v3 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 6.0e-127
Identity = 206/243 (84.77%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 26  FAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85
           F    H QH V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKP +ARVGAVSPVLF
Sbjct: 19  FGQQVHPQHNVADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAVSPVLF 78

Query: 86  RNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGE 145
           +NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI+GE
Sbjct: 79  KNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGE 138

Query: 146 GGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET 205
            GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLS+LVEFEDGDGD+G+M I+E 
Sbjct: 139 NGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREA 198

Query: 206 NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRL 265
              EWL+MNH+WGA WCII GPLKGPFSV+LTTL+TGRTLSAR++IPRNW+PKATYTSRL
Sbjct: 199 GGTEWLEMNHVWGATWCIIRGPLKGPFSVKLTTLTTGRTLSAREVIPRNWAPKATYTSRL 258

Query: 266 KFF 269
            FF
Sbjct: 259 NFF 261

[Close]

BLAST of CsaV3_6G013020 vs. TrEMBL
Match: tr|A0A067JMV8|A0A067JMV8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25805 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.3e-126
Identity = 207/252 (82.14%), Postives = 225/252 (89.29%), Query Frame = 0


Query: 17  FSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKAR 76
           F     L     +  + H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKPL+AR
Sbjct: 13  FHFLVFLKVLTVSGQVPHRVNDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLRAR 72

Query: 77  VGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAA 136
           VGAVSP+LF+NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNG THFDLSGAA
Sbjct: 73  VGAVSPILFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAA 132

Query: 137 FGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD 196
           FGRMAIAGE G LRNRGE+PV+YRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD
Sbjct: 133 FGRMAIAGESGPLRNRGELPVMYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD 192

Query: 197 IGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWS 256
           +G+M I+E    EWL+MNHLWGANWCIIGGPLKGPFSV+LTTLSTGR +SARD+IPRNWS
Sbjct: 193 VGSMHIREAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRAVSARDVIPRNWS 252

Query: 257 PKATYTSRLKFF 269
           PKATYTSRL FF
Sbjct: 253 PKATYTSRLNFF 264

The following BLAST results are available for this feature:

BLAST of CsaV3_6G013020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139938.1	5.6e-161	100.00	PREDICTED: expansin-B3 [Cucumis sativus] >KGN46748.1 hypothetical protein Csa_6G...	[more]
XP_008448283.1	3.1e-151	94.42	PREDICTED: expansin-B3 [Cucumis melo]	[more]
XP_022986016.1	3.3e-145	90.71	expansin-B3-like [Cucurbita maxima]	[more]
XP_023512091.1	8.2e-144	90.37	expansin-B3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943728.1	5.3e-143	89.63	expansin-B3-like [Cucurbita moschata]	[more]

BLAST of CsaV3_6G013020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28250.1	4.4e-115	75.61	expansin B3	[more]
AT2G20750.1	1.6e-104	71.01	expansin B1	[more]
AT1G65680.1	9.9e-67	47.84	expansin B2	[more]
AT2G45110.1	3.2e-57	44.89	expansin B4	[more]
AT3G60570.1	1.9e-54	42.36	expansin B5	[more]

BLAST of CsaV3_6G013020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M0I2\|EXPB3_ARATH	7.9e-114	75.61	Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2	[more]
sp\|Q0DZ85\|EXB16_ORYSJ	2.4e-110	71.88	Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1	[more]
sp\|Q7X6J9\|EXB17_ORYSJ	2.4e-110	76.96	Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2	[more]
sp\|Q9SKU2\|EXPB1_ARATH	2.8e-103	71.01	Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1	[more]
sp\|Q9SHY6\|EXPB2_ARATH	1.8e-65	47.84	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]

BLAST of CsaV3_6G013020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KB42\|A0A0A0KB42_CUCSA	3.7e-161	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128580 PE=3 SV=1	[more]
tr\|A0A1S3BJY6\|A0A1S3BJY6_CUCME	2.1e-151	94.42	expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1	[more]
tr\|B9RW20\|B9RW20_RICCO	9.3e-128	84.96	Beta-expansin 3, putative OS=Ricinus communis OX=3988 GN=RCOM_1175460 PE=3 SV=1	[more]
tr\|U5FIY0\|U5FIY0_POPTR	6.0e-127	84.77	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G101900v3 PE=...	[more]
tr\|A0A067JMV8\|A0A067JMV8_JATCU	1.3e-126	82.14	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25805 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0019953	sexual reproduction

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR007117	Expansin_CBD
IPR009009	RlpA-like_DPBB
IPR036908	RlpA-like_sf
IPR036749	Expansin_CBD_sf
IPR007112	Expansin/allergen_DPBB_dom
IPR005795	LolPI
IPR007118	Expan_Lol_pI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G013020.1	CsaV3_6G013020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 40..55 score: 42.34 coord: 152..168 score: 47.94 coord: 210..224 score: 40.0 coord: 81..99 score: 51.84 coord: 249..263 score: 30.83 coord: 58..76 score: 43.82
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 141..156 score: 39.2 coord: 119..134 score: 38.07 coord: 79..90 score: 26.52 coord: 189..204 score: 47.73 coord: 173..188 score: 50.57 coord: 239..256 score: 34.85
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 77..159 e-value: 3.1E-10 score: 50.0
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 59..169 score: 31.3
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	G3DSA:2.60.40.760		coord: 166..268 e-value: 4.8E-33 score: 115.1
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	SSF49590	PHL pollen allergen	coord: 169..263
IPR036908	RlpA-like domain superfamily	GENE3D	G3DSA:2.40.40.10		coord: 30..165 e-value: 3.2E-42 score: 145.9
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	SSF50685	Barwin-like endoglucanases	coord: 39..168
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 79..158 e-value: 6.9E-17 score: 61.4
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 171..252 e-value: 5.2E-26 score: 90.4
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 182..263 score: 22.678
None	No IPR available	PANTHER	PTHR31692:SF5	EXPANSIN-B3	coord: 10..268
None	No IPR available	PANTHER	PTHR31692	FAMILY NOT NAMED	coord: 10..268

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G013020	CSPI06G10570	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G013020	CSPI07G04550	Wild cucumber (PI 183967)	cpicucB412
CsaV3_6G013020	Cucsa.119000	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G013020	Cucsa.147750	Cucumber (Gy14) v1	cgycucB224
CsaV3_6G013020	CmaCh02G001040	Cucurbita maxima (Rimu)	cmacucB0743
CsaV3_6G013020	CmaCh11G018720	Cucurbita maxima (Rimu)	cmacucB0168
CsaV3_6G013020	CmaCh20G001930	Cucurbita maxima (Rimu)	cmacucB0681
CsaV3_6G013020	CmoCh11G019490	Cucurbita moschata (Rifu)	cmocucB0152
CsaV3_6G013020	CmoCh20G002120	Cucurbita moschata (Rifu)	cmocucB0664
CsaV3_6G013020	CmoCh02G001050	Cucurbita moschata (Rifu)	cmocucB0733
CsaV3_6G013020	Cp4.1LG16g07820	Cucurbita pepo (Zucchini)	cpecucB0354
CsaV3_6G013020	Cp4.1LG05g15010	Cucurbita pepo (Zucchini)	cpecucB0937
CsaV3_6G013020	CsGy6G010650	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G013020	CsGy7G004140	Cucumber (Gy14) v2	cgybcucB346
CsaV3_6G013020	Carg13581	Silver-seed gourd	carcucB0032
CsaV3_6G013020	Carg18448	Silver-seed gourd	carcucB0448
CsaV3_6G013020	Carg19117	Silver-seed gourd	carcucB0757
CsaV3_6G013020	Cla013569	Watermelon (97103) v1	cucwmB550
CsaV3_6G013020	MELO3C013606	Melon (DHL92) v3.5.1	cucmeB449
CsaV3_6G013020	MELO3C018743	Melon (DHL92) v3.5.1	cucmeB468
CsaV3_6G013020	ClCG02G017560	Watermelon (Charleston Gray)	cucwcgB472
CsaV3_6G013020	Lsi11G015430	Bottle gourd (USVL1VR-Ls)	cuclsiB457
CsaV3_6G013020	Lsi10G008890	Bottle gourd (USVL1VR-Ls)	cuclsiB445
CsaV3_6G013020	MELO3C018743.2	Melon (DHL92) v3.6.1	cucmedB458
CsaV3_6G013020	MELO3C013606.2	Melon (DHL92) v3.6.1	cucmedB440
CsaV3_6G013020	Cla97C02G043310	Watermelon (97103) v2	cucwmbB461
CsaV3_6G013020	Bhi05G001601	Wax gourd	cucwgoB587
CsaV3_6G013020	Bhi10G000873	Wax gourd	cucwgoB620

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_6G013020	CsaV3_7G004360	Cucumber (Chinese Long) v3	cuccucB218

The following block(s) are covering this gene:

None