CSPI06G10570 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G10570
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	expansin B3
Location	Chr6 : 9177218 .. 9179157 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCACAGCTCCAACTGCAACATCATACTCAAACCGTCTCTCACGCACTGCACAATCCTCTCACTCAACTGTTTTTTCTCCATCACCCTCCTCCTCGCCCGAACCTCACTTTCTCGTCACCTCCACACACCCAAATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTACGCCCCTTCCATTTCCCTACATTTTCTTTGTTTTAGGGTCTCTAAAGTTTATGGGTCTGCTCTGTTTCTTTTGAAATACTATCTCCAGCTTTCCTTTAAAATGTGTTTACAAGGGTTTGAATTAACAGAAACCCACTTCACAAATCACTTCTACCCAGCCCTAATTTCGCTTTTTATTACTTCTTTGCTGCTACAAATTAAGGGATCTGACAATGTGAAGTCACAGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGGTACAAATTCGTTACAACTCTGTTTTTTTTTTTTTTTTATTATTCTTTTTTGTCACATTATGATTTGTTTCTTTCTTTCTTTTTATCTATCTCTGCTTTGTATTTTGTCGCTTATTTTTAGTTGCCCTAAATGTGTAGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAGTAAGAAGAACACCCTTTACTCATGTAAAGCATAATATTCCATTGGTTAAATTACAATATTTTAAGATGTGAAAAGATAGAAAAAGCTGGTACTTAATTACTCGTTGAAAGTTGAATATCCGAGCGGAAGAATCTTTGAAAAAGAAGTATCTTTATTAGAAGAAAAAGCGTGGGGTTTTCCCACATGATTATAAAAAAATCTCATTCATATTGACAAAGGAATACTAGTGATATGAGTTAATATTTGTGTTTGGCAGACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACTTACACTTCCCGCCTTAAATTCTTCACTTAATGAAGAAGAGAAAAAAGCAGCAGTTTTTTTTTTTTTCTTCTCTTTTGGAGGTTTGAGAAAAGAAAAGGCATATTAGGAAGAAAAGCATATTTAGTTGCTTTTTGTTCTATGCCTAAAGGGAGGGGGAGGGGAAGTGTTAGTAGAAAAAGTAGCCGTTATCCGTTATCTTTAGTAGAAAAAAGTGACCGTTGGAGTGCGAAATGGCATCCAATGAATGAGTTGAGTGAGTGTGGTGTGTGATGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGATATTGAGAATATTTATATAGCAGCCCAGCCCTCTCCAAAAGTGGAGAGAGAGCGTGGGGGTGTGTTTGTTGTAGTGTGTTATTTAATGATCAA

mRNA sequence

ATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACTTACACTTCCCGCCTTAAATTCTTCACTTAA

Coding sequence (CDS)

ATGCAGCTCTTCCTTCACCGCTCTACTTTCCGCCTCATTACAGCTTTCTTCTCTGCTGCAGCTTTGCTCCATTGGTTCGCTGCAGCGGCTCACCTCCAACACCCTGTGCCGGATCTACATTGGCTTCCAGCCACCGCCACTTGGTACGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTTTAAAGGCTAGAGTTGGGGCTGTGAGTCCTGTTTTGTTCAGAAATGGTGAAGGTTGTGGAGCTTGTTACAAAGTGAAGTGTTTGGACCACAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGCGCCGCCTTTGGTCGTATGGCCATTGCCGGAGAAGGTGGGCAGCTCAGAAACCGAGGAGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTCTTGGTTGAATTCGAGGATGGGGATGGAGACATTGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGAGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCAGTGAGATTAACAACATTATCTACCGGAAGAACTCTCTCAGCAAGAGATATAATCCCAAGGAATTGGTCTCCAAAAGCCACTTACACTTCCCGCCTTAAATTCTTCACTTAA

Homology

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BLAST of CSPI06G10570 vs. Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 7.7e-114
Identity = 186/246 (75.61%), Postives = 212/246 (86.18%), Query Frame = 1


Query: 22  LLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVS 81
           LL   +A A     V + HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+
Sbjct: 17  LLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76

Query: 82  PVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMA 141
           P+LF+NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+A
Sbjct: 77  PILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLA 136

Query: 142 IAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQ 201
           IAGE G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M 
Sbjct: 137 IAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMH 196

Query: 202 IKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATY 261
           I++  + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY
Sbjct: 197 IRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATY 256

Query: 262 TSRLKF 268
           +SRL F
Sbjct: 257 SSRLNF 260

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BLAST of CSPI06G10570 vs. Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 399.8 bits (1026), Expect = 2.3e-110
Identity = 177/230 (76.96%), Postives = 200/230 (86.96%), Query Frame = 1


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D+ W PATATWYG  EGDGS GGACGYG+LVDV P+KARVG+VSPVLF++GEGCGACYKV
Sbjct: 45  DMEWRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKV 104

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KCLDH ICSRRAVT+IVTDECPGG C+ G THFDLSGAAF RMA+AG GG LR+RG++ V
Sbjct: 105 KCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSV 164

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLW 217
           +YRRT CKY GKNIAF VNEGST++WLSLLVEFEDG GDIG+MQIK+ NS EWLDM H+W
Sbjct: 165 VYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVW 224

Query: 218 GANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           GA WC++ GPL GPFSVRLTTLS  + L+ARD+IPRNW P ATYTSRL F
Sbjct: 225 GATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSRLNF 274

[Close]

BLAST of CSPI06G10570 vs. Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.0e-110
Identity = 185/256 (72.27%), Postives = 211/256 (82.42%), Query Frame = 1


Query: 12  LITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVK 71
           L  +  SAA +     A A   H V D  W PATATWYGS +GDGSDGGACGYG LVDV 
Sbjct: 18  LFVSLLSAAFVFDSGEAGA--AHRVVDPEWHPATATWYGSADGDGSDGGACGYGTLVDVV 77

Query: 72  PLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFD 131
           P+K RVGAVSPVLF+ GEGCGACYKV+CLD +ICSRRAVT+IVTDECPGG C+ G THFD
Sbjct: 78  PMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFD 137

Query: 132 LSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFE 191
           LSGAAF R+A+AG GGQL+NRGEI V+YRRT CKY GKNIAFHVNEGST +WLSLLVEFE
Sbjct: 138 LSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFE 197

Query: 192 DGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDII 251
           DGDGDIG+MQ+K+ NS +W DM H+WGA W +  GPL GPFSVRLTTL+T +TLSA+D+I
Sbjct: 198 DGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVI 257

Query: 252 PRNWSPKATYTSRLKF 268
           P+NW+PKATYTSRL F
Sbjct: 258 PKNWTPKATYTSRLNF 271

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BLAST of CSPI06G10570 vs. Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.8e-103
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 1


Query: 31  HLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEG 90
           H    V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEG
Sbjct: 30  HSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEG 89

Query: 91  CGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIAGEGGQL 150
           CGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +
Sbjct: 90  CGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVI 149

Query: 151 RNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGE 210
           RNRG + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S E
Sbjct: 150 RNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKE 209

Query: 211 WLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           W+ M H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRL F
Sbjct: 210 WISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of CSPI06G10570 vs. Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.7e-65
Identity = 111/232 (47.84%), Postives = 157/232 (67.67%), Query Frame = 1


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+V
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ +
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHL 217
           +Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 218 WGANWCI-IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           WGA W + +  PL+ P S+R+T+L +G+T+ A ++IP NW P A Y S + F
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of CSPI06G10570 vs. TrEMBL
Match: A0A0A0KB42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128580 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.0e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGRTLSARDIIPRNWSPKATYTSRLKFFT
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

[Close]

BLAST of CSPI06G10570 vs. TrEMBL
Match: B9RW20_RICCO (Beta-expansin 3, putative OS=Ricinus communis GN=RCOM_1175460 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 5.0e-128
Identity = 209/246 (84.96%), Postives = 224/246 (91.06%), Query Frame = 1


Query: 23  LHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSP 82
           L  F     + H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKPLKARVGAVSP
Sbjct: 12  LKCFVVYGQVHHRVTDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLKARVGAVSP 71

Query: 83  VLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI 142
           +LF+NGEGCGACYKVKCLD +ICSRRAVTIIVTDECPGGYCSNG THFDLSGAAFGRMAI
Sbjct: 72  ILFKNGEGCGACYKVKCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAI 131

Query: 143 AGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQI 202
            GE GQLRNRGE+PV YRRTPCKYPGKNIAFHVNEGST+YWLSLLVEFEDGDGD+G+M I
Sbjct: 132 TGESGQLRNRGELPVTYRRTPCKYPGKNIAFHVNEGSTNYWLSLLVEFEDGDGDVGSMHI 191

Query: 203 KETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYT 262
           +E    EWL+MNHLWGANWCIIGGPLKGPFSV+LTTLSTGR LSARD+IPRNWSPKATYT
Sbjct: 192 REAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRGLSARDVIPRNWSPKATYT 251

Query: 263 SRLKFF 269
           SRLKF+
Sbjct: 252 SRLKFY 257

[Close]

BLAST of CSPI06G10570 vs. TrEMBL
Match: U5FIY0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s13300g PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.3e-127
Identity = 206/243 (84.77%), Postives = 224/243 (92.18%), Query Frame = 1


Query: 26  FAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85
           F    H QH V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKP +ARVGAVSPVLF
Sbjct: 19  FGQQVHPQHNVADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAVSPVLF 78

Query: 86  RNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGE 145
           +NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI+GE
Sbjct: 79  KNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGE 138

Query: 146 GGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET 205
            GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLS+LVEFEDGDGD+G+M I+E 
Sbjct: 139 NGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREA 198

Query: 206 NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRL 265
              EWL+MNH+WGA WCII GPLKGPFSV+LTTL+TGRTLSAR++IPRNW+PKATYTSRL
Sbjct: 199 GGTEWLEMNHVWGATWCIIRGPLKGPFSVKLTTLTTGRTLSAREVIPRNWAPKATYTSRL 258

Query: 266 KFF 269
            FF
Sbjct: 259 NFF 261

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BLAST of CSPI06G10570 vs. TrEMBL
Match: A0A067JMV8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25805 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 7.3e-127
Identity = 207/252 (82.14%), Postives = 225/252 (89.29%), Query Frame = 1


Query: 17  FSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKAR 76
           F     L     +  + H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKPL+AR
Sbjct: 13  FHFLVFLKVLTVSGQVPHRVNDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLRAR 72

Query: 77  VGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAA 136
           VGAVSP+LF+NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNG THFDLSGAA
Sbjct: 73  VGAVSPILFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAA 132

Query: 137 FGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD 196
           FGRMAIAGE G LRNRGE+PV+YRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD
Sbjct: 133 FGRMAIAGESGPLRNRGELPVMYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD 192

Query: 197 IGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWS 256
           +G+M I+E    EWL+MNHLWGANWCIIGGPLKGPFSV+LTTLSTGR +SARD+IPRNWS
Sbjct: 193 VGSMHIREAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRAVSARDVIPRNWS 252

Query: 257 PKATYTSRLKFF 269
           PKATYTSRL FF
Sbjct: 253 PKATYTSRLNFF 264

[Close]

BLAST of CSPI06G10570 vs. TrEMBL
Match: B9I5J2_POPTR (Beta-expansin 1 family protein OS=Populus trichocarpa GN=POPTR_0013s13780g PE=3 SV=2)

HSP 1 Score: 459.5 bits (1181), Expect = 2.8e-126
Identity = 205/243 (84.36%), Postives = 221/243 (90.95%), Query Frame = 1


Query: 26  FAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85
           F    H  H V DLHW PATATWYGSP+GDGS+GGACGYG+LVDVKPL+ARVGAVSP+LF
Sbjct: 19  FGQQYHTHHDVADLHWKPATATWYGSPDGDGSNGGACGYGSLVDVKPLRARVGAVSPILF 78

Query: 86  RNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGE 145
           +NGEGCGACYKV+CLD +ICS RAVTIIVTDECPGGYCSNGNTHFDLSGAAFG MAI+GE
Sbjct: 79  KNGEGCGACYKVRCLDKSICSERAVTIIVTDECPGGYCSNGNTHFDLSGAAFGHMAISGE 138

Query: 146 GGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET 205
            GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD+G+M I+E 
Sbjct: 139 NGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREA 198

Query: 206 NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRL 265
              EWL+MNHLWGANWC+I GPLKGP SV+LTTLSTGRTLSARD+IPRNW PKATYTSRL
Sbjct: 199 GGTEWLEMNHLWGANWCVIRGPLKGPLSVKLTTLSTGRTLSARDVIPRNWVPKATYTSRL 258

Query: 266 KFF 269
            FF
Sbjct: 259 NFF 261

[Close]

BLAST of CSPI06G10570 vs. TAIR10
Match: AT4G28250.1 (AT4G28250.1 expansin B3)

HSP 1 Score: 411.4 bits (1056), Expect = 4.4e-115
Identity = 186/246 (75.61%), Postives = 212/246 (86.18%), Query Frame = 1


Query: 22  LLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVS 81
           LL   +A A     V + HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+
Sbjct: 17  LLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76

Query: 82  PVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMA 141
           P+LF+NGEGCGACYKV+CLD +ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+A
Sbjct: 77  PILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLA 136

Query: 142 IAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQ 201
           IAGE G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M 
Sbjct: 137 IAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMH 196

Query: 202 IKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATY 261
           I++  + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY
Sbjct: 197 IRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATY 256

Query: 262 TSRLKF 268
           +SRL F
Sbjct: 257 SSRLNF 260

[Close]

BLAST of CSPI06G10570 vs. TAIR10
Match: AT2G20750.1 (AT2G20750.1 expansin B1)

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 1


Query: 31  HLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEG 90
           H    V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEG
Sbjct: 30  HSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEG 89

Query: 91  CGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAIAGEGGQL 150
           CGACYKV+CLD  ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +
Sbjct: 90  CGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVI 149

Query: 151 RNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGE 210
           RNRG + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S E
Sbjct: 150 RNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKE 209

Query: 211 WLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           W+ M H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRL F
Sbjct: 210 WISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of CSPI06G10570 vs. TAIR10
Match: AT1G65680.1 (AT1G65680.1 expansin B2)

HSP 1 Score: 250.8 bits (639), Expect = 9.9e-67
Identity = 111/232 (47.84%), Postives = 157/232 (67.67%), Query Frame = 1


Query: 38  DLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           D  W  A +TWYG+P G GSDGGACGYGN V   P    V A  P LF++G+GCGACY+V
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQV 103

Query: 98  KCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPV 157
           KC   + CS+  VT+++TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ +
Sbjct: 104 KCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQI 163

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHL 217
           +Y++  C Y GK + F V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  
Sbjct: 164 LYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQS 223

Query: 218 WGANWCI-IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
           WGA W + +  PL+ P S+R+T+L +G+T+ A ++IP NW P A Y S + F
Sbjct: 224 WGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of CSPI06G10570 vs. TAIR10
Match: AT2G45110.1 (AT2G45110.1 expansin B4)

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 1


Query: 44  ATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHN 103
           A  TWYG P G GS GGACGYG+ V   PL A V A  P LF NG+GCG CY+V C+ H 
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 104 ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTP 163
            CS   +T+ +TDECPGG C++   H DLSG A G +A  G+  QLR+ G I V Y+R  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 164 CKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCI 223
           C Y G NI F ++ G+  Y++S +VE+E+GDGD+  ++I+    G ++ M  +  A W +
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPA-GGSFISMQEMRSAVWKV 215

Query: 224 -IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
             G  L+GPF++RLT+  + + + A ++IP NW P  +Y S + F
Sbjct: 216 NSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

[Close]

BLAST of CSPI06G10570 vs. TAIR10
Match: AT3G60570.1 (AT3G60570.1 expansin B5)

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54
Identity = 97/229 (42.36%), Postives = 146/229 (63.76%), Query Frame = 1


Query: 40  HWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKC 99
           HW  A  TWYG  EG G+ GGACGYG+ V   P +  V A  P LF++G+GCGACY++KC
Sbjct: 33  HWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKC 92

Query: 100 LDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIY 159
            DH +C+++ + ++++DECPG  C+  + HFDLSG AFG +A  G+G QLRN GE+  + 
Sbjct: 93  -DHPLCTKKPIKVMISDECPG--CTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKTM- 152

Query: 160 RRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGA 219
                      IA HV+ G+  Y++S  V+F +GDG+   ++++    G+++ M  +  A
Sbjct: 153 -----------IAIHVDAGANPYYMSFAVKFANGDGNFACIEVQPA-GGQYMKMEEMRSA 212

Query: 220 NWCIIGG-PLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLKF 268
            W +  G PLKGPF++RLT+  +G+ + A+ +IP  WSP A Y S++ F
Sbjct: 213 VWRLSPGVPLKGPFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNF 245

[Close]

BLAST of CSPI06G10570 vs. NCBI nr
Match: gi|449444350|ref|XP_004139938.1| (PREDICTED: expansin-B3 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 2.9e-161
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGRTLSARDIIPRNWSPKATYTSRLKFFT
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

[Close]

BLAST of CSPI06G10570 vs. NCBI nr
Match: gi|659094870|ref|XP_008448283.1| (PREDICTED: expansin-B3 [Cucumis melo])

HSP 1 Score: 543.9 bits (1400), Expect = 1.6e-151
Identity = 254/269 (94.42%), Postives = 257/269 (95.54%), Query Frame = 1


Query: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60
           M LFLH  +FRLITA FSAAALL W  AAA LQH +PDLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 270
           TGR LSARDIIPRNWSPKATYTSRL FFT
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of CSPI06G10570 vs. NCBI nr
Match: gi|255553797|ref|XP_002517939.1| (PREDICTED: expansin-B3 [Ricinus communis])

HSP 1 Score: 465.3 bits (1196), Expect = 7.2e-128
Identity = 209/246 (84.96%), Postives = 224/246 (91.06%), Query Frame = 1


Query: 23  LHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSP 82
           L  F     + H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKPLKARVGAVSP
Sbjct: 12  LKCFVVYGQVHHRVTDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLKARVGAVSP 71

Query: 83  VLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI 142
           +LF+NGEGCGACYKVKCLD +ICSRRAVTIIVTDECPGGYCSNG THFDLSGAAFGRMAI
Sbjct: 72  ILFKNGEGCGACYKVKCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAI 131

Query: 143 AGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQI 202
            GE GQLRNRGE+PV YRRTPCKYPGKNIAFHVNEGST+YWLSLLVEFEDGDGD+G+M I
Sbjct: 132 TGESGQLRNRGELPVTYRRTPCKYPGKNIAFHVNEGSTNYWLSLLVEFEDGDGDVGSMHI 191

Query: 203 KETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYT 262
           +E    EWL+MNHLWGANWCIIGGPLKGPFSV+LTTLSTGR LSARD+IPRNWSPKATYT
Sbjct: 192 REAGGSEWLEMNHLWGANWCIIGGPLKGPFSVKLTTLSTGRGLSARDVIPRNWSPKATYT 251

Query: 263 SRLKFF 269
           SRLKF+
Sbjct: 252 SRLKFY 257

[Close]

BLAST of CSPI06G10570 vs. NCBI nr
Match: gi|566243669|ref|XP_006371575.1| (hypothetical protein POPTR_0019s13300g [Populus trichocarpa])

HSP 1 Score: 462.6 bits (1189), Expect = 4.7e-127
Identity = 206/243 (84.77%), Postives = 224/243 (92.18%), Query Frame = 1


Query: 26  FAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85
           F    H QH V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKP +ARVGAVSPVLF
Sbjct: 19  FGQQVHPQHNVADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAVSPVLF 78

Query: 86  RNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGE 145
           +NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI+GE
Sbjct: 79  KNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGE 138

Query: 146 GGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET 205
            GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLS+LVEFEDGDGD+G+M I+E 
Sbjct: 139 NGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDGDVGSMHIREA 198

Query: 206 NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRL 265
              EWL+MNH+WGA WCII GPLKGPFSV+LTTL+TGRTLSAR++IPRNW+PKATYTSRL
Sbjct: 199 GGTEWLEMNHVWGATWCIIRGPLKGPFSVKLTTLTTGRTLSAREVIPRNWAPKATYTSRL 258

Query: 266 KFF 269
            FF
Sbjct: 259 NFF 261

[Close]

BLAST of CSPI06G10570 vs. NCBI nr
Match: gi|743892744|ref|XP_011039743.1| (PREDICTED: expansin-B3 [Populus euphratica])

HSP 1 Score: 462.2 bits (1188), Expect = 6.1e-127
Identity = 207/243 (85.19%), Postives = 224/243 (92.18%), Query Frame = 1


Query: 26  FAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85
           F    H +H V DLHW PATATWYGSP+GDGSDGGACGYG+LVDVKP +ARVGAVSPVLF
Sbjct: 19  FGQQVHPRHNVADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRARVGAVSPVLF 78

Query: 86  RNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGE 145
           +NGEGCGACYKV+CLD +ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAI+GE
Sbjct: 79  KNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAISGE 138

Query: 146 GGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKET 205
            GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGD+G+M I+E 
Sbjct: 139 NGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREA 198

Query: 206 NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRL 265
              EWL+MNH+WGANWCII GPLKGPFSV+LTTLSTGRTLSAR++IPRNW+ KATYTSRL
Sbjct: 199 GGTEWLEMNHVWGANWCIIRGPLKGPFSVKLTTLSTGRTLSAREVIPRNWAAKATYTSRL 258

Query: 266 KFF 269
            FF
Sbjct: 259 NFF 261

The following BLAST results are available for this feature:

BLAST of CSPI06G10570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EXPB3_ARATH	7.7e-114	75.61	Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2	[more]
EXB17_ORYSJ	2.3e-110	76.96	Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2	[more]
EXB16_ORYSJ	3.0e-110	72.27	Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=3 SV=1	[more]
EXPB1_ARATH	2.8e-103	71.01	Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1	[more]
EXPB2_ARATH	1.7e-65	47.84	Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=3 SV=2	[more]

BLAST of CSPI06G10570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB42_CUCSA	2.0e-161	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128580 PE=3 SV=1	[more]
B9RW20_RICCO	5.0e-128	84.96	Beta-expansin 3, putative OS=Ricinus communis GN=RCOM_1175460 PE=3 SV=1	[more]
U5FIY0_POPTR	3.3e-127	84.77	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s13300g PE=3 SV=1	[more]
A0A067JMV8_JATCU	7.3e-127	82.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25805 PE=3 SV=1	[more]
B9I5J2_POPTR	2.8e-126	84.36	Beta-expansin 1 family protein OS=Populus trichocarpa GN=POPTR_0013s13780g PE=3 ...	[more]

BLAST of CSPI06G10570 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28250.1	4.4e-115	75.61	expansin B3	[more]
AT2G20750.1	1.6e-104	71.01	expansin B1	[more]
AT1G65680.1	9.9e-67	47.84	expansin B2	[more]
AT2G45110.1	3.2e-57	44.89	expansin B4	[more]
AT3G60570.1	1.9e-54	42.36	expansin B5	[more]

BLAST of CSPI06G10570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444350\|ref\|XP_004139938.1\|	2.9e-161	100.00	PREDICTED: expansin-B3 [Cucumis sativus]	[more]
gi\|659094870\|ref\|XP_008448283.1\|	1.6e-151	94.42	PREDICTED: expansin-B3 [Cucumis melo]	[more]
gi\|255553797\|ref\|XP_002517939.1\|	7.2e-128	84.96	PREDICTED: expansin-B3 [Ricinus communis]	[more]
gi\|566243669\|ref\|XP_006371575.1\|	4.7e-127	84.77	hypothetical protein POPTR_0019s13300g [Populus trichocarpa]	[more]
gi\|743892744\|ref\|XP_011039743.1\|	6.1e-127	85.19	PREDICTED: expansin-B3 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005795	LolPI
IPR007112	Expansin/allergen_DPBB_dom
IPR007117	Expansin_CBD
IPR007118	Expan_Lol_pI
IPR009009	RlpA-like_DPBB

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **Biological Process**
Term	Definition
GO:0019953	sexual reproduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G10570.1	CSPI06G10570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 141..156 score: 1.4E-15coord: 119..134 score: 1.4E-15coord: 79..90 score: 1.4E-15coord: 189..204 score: 1.4E-15coord: 173..188 score: 1.4E-15coord: 239..256 score: 1.4
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 77..159 score: 3.1
IPR007112	Expansin/pollen allergen, DPBB domain	PROFILE	PS50842	EXPANSIN_EG45	coord: 59..169 score:
IPR007117	Expansin, cellulose-binding-like domain	GENE3D	G3DSA:2.60.40.760		coord: 165..267 score: 3.0
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 171..252 score: 4.0
IPR007117	Expansin, cellulose-binding-like domain	PROFILE	PS50843	EXPANSIN_CBD	coord: 182..263 score: 22
IPR007117	Expansin, cellulose-binding-like domain	unknown	SSF49590	PHL pollen allergen	coord: 169..263 score: 3.66
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 40..55 score: 3.6E-26coord: 152..168 score: 3.6E-26coord: 210..224 score: 3.6E-26coord: 81..99 score: 3.6E-26coord: 249..263 score: 3.6E-26coord: 58..76 score: 3.6
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	G3DSA:2.40.40.10		coord: 28..164 score: 2.2
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 79..158 score: 6.7
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 39..168 score: 9.07
None	No IPR available	PANTHER	PTHR31692	FAMILY NOT NAMED	coord: 1..269 score: 3.1E
None	No IPR available	PANTHER	PTHR31692:SF5	EXPANSIN-B1-RELATED	coord: 1..269 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G10570	Cla013569	Watermelon (97103) v1	cpiwmB545
CSPI06G10570	Csa6G128580	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G10570	Csa7G047420	Cucumber (Chinese Long) v2	cpicuB322
CSPI06G10570	MELO3C018743	Melon (DHL92) v3.5.1	cpimeB458
CSPI06G10570	MELO3C013606	Melon (DHL92) v3.5.1	cpimeB438
CSPI06G10570	ClCG02G017560	Watermelon (Charleston Gray)	cpiwcgB474
CSPI06G10570	Lsi10G008890	Bottle gourd (USVL1VR-Ls)	cpilsiB421
CSPI06G10570	Lsi11G015430	Bottle gourd (USVL1VR-Ls)	cpilsiB434
CSPI06G10570	MELO3C013606.2	Melon (DHL92) v3.6.1	cpimedB436
CSPI06G10570	MELO3C018743.2	Melon (DHL92) v3.6.1	cpimedB451
CSPI06G10570	CsaV3_6G013020	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G10570	CsaV3_7G004360	Cucumber (Chinese Long) v3	cpicucB379
CSPI06G10570	Cla97C02G043310	Watermelon (97103) v2	cpiwmbB467
CSPI06G10570	Bhi10G000873	Wax gourd	cpiwgoB604
CSPI06G10570	Bhi05G001601	Wax gourd	cpiwgoB574
CSPI06G10570	Cucsa.119000	Cucumber (Gy14) v1	cgycpiB156
CSPI06G10570	Cucsa.147750	Cucumber (Gy14) v1	cgycpiB218
CSPI06G10570	CmaCh20G001930	Cucurbita maxima (Rimu)	cmacpiB574
CSPI06G10570	CmaCh02G001040	Cucurbita maxima (Rimu)	cmacpiB626
CSPI06G10570	CmoCh02G001050	Cucurbita moschata (Rifu)	cmocpiB619
CSPI06G10570	CmoCh20G002120	Cucurbita moschata (Rifu)	cmocpiB563
CSPI06G10570	Cp4.1LG16g07820	Cucurbita pepo (Zucchini)	cpecpiB290
CSPI06G10570	Cp4.1LG05g15010	Cucurbita pepo (Zucchini)	cpecpiB760
CSPI06G10570	CsGy7G004140	Cucumber (Gy14) v2	cgybcpiB330
CSPI06G10570	CsGy6G010650	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G10570	Carg18448	Silver-seed gourd	carcpiB0452
CSPI06G10570	Carg13581	Silver-seed gourd	carcpiB0032

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI06G10570	CSPI07G04550	Wild cucumber (PI 183967)	cpicpiB191

The following block(s) are covering this gene:

None