CsaV3_6G009190 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G009190
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	14 kDa proline-rich protein DC2.15
Location	chr6 : 7407881 .. 7408689 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTGCACAATTCACATGCACACTGAAATTATCCTCAGCCACAGATTTGAAATTTCTGTCTGCCTATGGAGAAAAATAACCAATGCCATTCACTCACTTCAAAGAACTAAACTTCAATTCTAAGCCACAAACATCACATGGGGCAATCCCAAAATATCTCTTTCATAAATATACACTGTAACCACATTGGCTCTTAGGAAAAGAGTTATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTCTGTCCTTAAATTAGAGAGATTAAGTTCATGTTGTTTGTCTCATGTTAACTTGTTGTTTGATTGTAATCTTTGATTAAGTAAAAATCTTGAGCGTTTTGTATTTATATTTTACTTTGGTTTTTTTTTTTTTTTTTTGTATGGTATAAATTTATTTTTGACAACCTATGGAGTGAGAAACTAAACCTAGCTCTAAACCTTAATGACACAATTGAAC

mRNA sequence

ATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTCTGTCCTTAA

Coding sequence (CDS)

ATGGAGCTCAAATTTGTGAAGGTATTGGCTCTTGTAGTCTTGTTGAATATCATAGCTTTGGCTTGTGTTTCATCTGTCAAACCGAGTTGCCCTCCGAAGGTTCGACCATCACCTGCTACCACTCCGGCAACGCAGGCGAAGTGCCCGAAAGATACACTAAAGTTTGGGGTTTGTGGGAGCTGGCTTGGGCTGATATCCGAGCAGATTGGAGCAAAACCAAGCAAGAAATGTTGTAGTTTGTTGACGGGATTGGCCGATCTCGAAGCTGCATTGTGCTTGTGCACTGCGTTGAAAGCGAATGTGCTGGGTGTTGTTAGCCTCGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTCTGTCCTTAA

Protein sequence

MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

Homology

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BLAST of CsaV3_6G009190 vs. NCBI nr
Match: XP_004140487.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 proline-rich protein DC2.15 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 5.3e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of CsaV3_6G009190 vs. NCBI nr
Match: XP_008458132.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 8.5e-62
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 2   ELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSW 61
           ELKFVK+LALVVLLNIIALACVSS KPSCPPKVRPSPATTP TQAKCPKDTLKFGVCGSW
Sbjct: 3   ELKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSW 62

Query: 62  LGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 121
           LGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG
Sbjct: 63  LGLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 122

Query: 122 KSIPQGFVCP 132
           KSIPQGFVCP
Sbjct: 123 KSIPQGFVCP 132

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BLAST of CsaV3_6G009190 vs. NCBI nr
Match: XP_023000073.1 (putative lipid-binding protein At4g00165 [Cucurbita maxima])

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-54
Identity = 112/131 (85.50%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLN+IALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of CsaV3_6G009190 vs. NCBI nr
Match: XP_023514898.1 (putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-54
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

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BLAST of CsaV3_6G009190 vs. NCBI nr
Match: XP_022964428.1 (putative lipid-binding protein At4g00165 [Cucurbita moschata])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 112/131 (85.50%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGF CP
Sbjct: 121 GKSIPQGFACP 131

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BLAST of CsaV3_6G009190 vs. TAIR10
Match: AT4G00165.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 4   KFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLG 63
           K ++ L +++LLNI        V P    K  P P    AT  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGK+
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 124

Query: 124 IPQGFVC 131
           +PQGFVC
Sbjct: 125 VPQGFVC 128

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BLAST of CsaV3_6G009190 vs. TAIR10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVS 107
           CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++
Sbjct: 46  CPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-IN 105

Query: 108 LDVPIALSLVVNSCGKSIPQGFVC 131
           L+VP++LSL++N CGK +P GFVC
Sbjct: 106 LNVPVSLSLLLNVCGKKVPSGFVC 128

[Close]

BLAST of CsaV3_6G009190 vs. TAIR10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVS 107
           CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++
Sbjct: 46  CPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-IN 105

Query: 108 LDVPIALSLVVNSCGKSIPQGFVC 131
           L+VP++LSL++N CGK +P GFVC
Sbjct: 106 LNVPVSLSLLLNVCGKKVPSGFVC 128

[Close]

BLAST of CsaV3_6G009190 vs. TAIR10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 48  CPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSL 107
           CP DTLK GVC   LGL++  +G+ P   CC+LL GLA+LEAA+CLCTALKANVLG ++L
Sbjct: 52  CPTDTLKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLG-INL 111

Query: 108 DVPIALSLVVNSCGKSIPQGFVC 131
           +VPI L+L++N CGK +P GF C
Sbjct: 112 NVPIDLTLLLNYCGKKVPHGFQC 133

[Close]

BLAST of CsaV3_6G009190 vs. TAIR10
Match: AT1G12090.1 (extensin-like protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 47  KCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVV 106
           KCPKDTLK GVC + L GL+   +G  P + CCSL+ GLAD+EAA+CLCTALKAN+LG +
Sbjct: 54  KCPKDTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILG-I 113

Query: 107 SLDVPIALSLVVNSCGKSIPQGFVC 131
           +L++PI+LSL++N C K +P GF C
Sbjct: 114 NLNLPISLSLLLNVCSKQLPPGFQC 137

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BLAST of CsaV3_6G009190 vs. Swiss-Prot
Match: sp|Q8RW93|LBP65_ARATH (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-32
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 4   KFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLG 63
           K ++ L +++LLNI        V P    K  P P    AT  KCP+DTLKFGVCGSWLG
Sbjct: 5   KALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCGSWLG 64

Query: 64  LISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKS 123
           L+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NSCGK+
Sbjct: 65  LVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKN 124

Query: 124 IPQGFVC 131
           +PQGFVC
Sbjct: 125 VPQGFVC 128

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BLAST of CsaV3_6G009190 vs. Swiss-Prot
Match: sp|Q01595|CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 9   LALVVLLNIIALACVSSVKPSCPPKVRPSPATTPA----TQAKCPKDTLKFGVCGSWLGL 68
           +AL + L+++  A     +P+C   V P+P   P     +  +CP D LK  VC   LGL
Sbjct: 5   VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVLGL 64

Query: 69  ISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSI 128
           +  ++G    ++CC LL GL DL+AALCLCTA+KANVLG + L+VP++L+ ++N+CG+  
Sbjct: 65  V--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGRIC 124

Query: 129 PQGFVCP 132
           P+ F CP
Sbjct: 125 PEDFTCP 128

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BLAST of CsaV3_6G009190 vs. Swiss-Prot
Match: sp|P14009|14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 9   LALVVLLNIIALACVSSVKPSCP-------PKVRPSPATTPATQAKCPKDTLKFGVCGSW 68
           +AL   LNI+  A VSS +  CP                      KCP+D LK GVC   
Sbjct: 9   VALFFTLNILFFALVSSTE-KCPDPYXXXXXXXXXXXXXXXXXAGKCPRDALKLGVCADV 68

Query: 69  LGLI-SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 128
           L L+ +  IG+ P+  CCSLL GL +LEAA+CLCTA+KAN+LG  +L++PIALSLV+N+C
Sbjct: 69  LNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPIALSLVLNNC 128

Query: 129 GKSIPQGFVC 131
           GK +P GF C
Sbjct: 129 GKQVPNGFEC 136

[Close]

BLAST of CsaV3_6G009190 vs. Swiss-Prot
Match: sp|Q9S7I2|AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 44/90 (48.89%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 41  TPATQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN 100
           T AT   CPK++++ G C + L L+   +G  P K CCSL+ GLADLEAA+CLCTA+KA+
Sbjct: 21  TSATTGTCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKAS 80

Query: 101 VLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           +LG+V++++PI LS+++N C ++ P+ F C
Sbjct: 81  ILGIVNINLPINLSVLLNVCSRNAPKSFQC 110

[Close]

BLAST of CsaV3_6G009190 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 38  PATTPATQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTA 97
           P  TP +   CP D L+ GVC + L GL++ Q+G    + CCSL+ GL DL+AA+CLCTA
Sbjct: 89  PPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTA 148

Query: 98  LKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           L+ANVLG ++L+VPI+LS+++N C + +P  F C
Sbjct: 149 LRANVLG-INLNVPISLSVLLNVCNRRLPSNFQC 181

[Close]

BLAST of CsaV3_6G009190 vs. TrEMBL
Match: tr|A0A0A0KCL7|A0A0A0KCL7_CUCSA (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.5e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60
           MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of CsaV3_6G009190 vs. TrEMBL
Match: tr|A0A1S3C8D8|A0A1S3C8D8_CUCME (putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.6e-62
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 2   ELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSW 61
           ELKFVK+LALVVLLNIIALACVSS KPSCPPKVRPSPATTP TQAKCPKDTLKFGVCGSW
Sbjct: 3   ELKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSW 62

Query: 62  LGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 121
           LGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG
Sbjct: 63  LGLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCG 122

Query: 122 KSIPQGFVCP 132
           KSIPQGFVCP
Sbjct: 123 KSIPQGFVCP 132

[Close]

BLAST of CsaV3_6G009190 vs. TrEMBL
Match: tr|A0A2P5CLG1|A0A2P5CLG1_9ROSA (HMW glutenin OS=Trema orientalis OX=63057 GN=TorRG33x02_280640 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.8e-42
Identity = 83/124 (66.94%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 7   KVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLIS 66
           K +AL ++ N++   CV+S K  CPPK+ PSPA  P TQ KCPKDTLKFGVCGSWLGL++
Sbjct: 7   KSIALFIVFNLMLFNCVTSNKVPCPPKITPSPAPVPKTQGKCPKDTLKFGVCGSWLGLVT 66

Query: 67  EQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQ 126
           E +G KPSK+CC+L+ GLADLEAALCLCTA+KANVLGV+ + VPIA+SL+VN+CGK +P+
Sbjct: 67  EVVGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGVIKVKVPIAVSLLVNACGKKVPE 126

Query: 127 GFVC 131
           GFVC
Sbjct: 127 GFVC 130

[Close]

BLAST of CsaV3_6G009190 vs. TrEMBL
Match: tr|A0A2P5BES0|A0A2P5BES0_PARAD (HMW glutenin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245410 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.2e-41
Identity = 83/125 (66.40%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 6   VKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLI 65
           +K +AL ++ N++   CV+S    CPPK  PSPA  P TQ KCPKDTLKFGVCGSWLGL+
Sbjct: 6   LKSIALFIVFNLMLFNCVTSNNVPCPPKGAPSPAPVPKTQGKCPKDTLKFGVCGSWLGLV 65

Query: 66  SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIP 125
           +E +G KPSK+CC+L+ GLADLEAALCLCTA+KANVLGVV + VPIA+SL+VN+CGK +P
Sbjct: 66  TEVVGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGVVKVKVPIAVSLLVNACGKKVP 125

Query: 126 QGFVC 131
           +GFVC
Sbjct: 126 EGFVC 130

[Close]

BLAST of CsaV3_6G009190 vs. TrEMBL
Match: tr|M5X1J3|M5X1J3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G139600 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 83/124 (66.94%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 7   KVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGSWLGLIS 66
           + + L +L NII L+ VSS K  CPP    SPA+ P  Q KCP+DTLKFGVCGSWLGL++
Sbjct: 7   QAVVLFILFNIICLSLVSSNKVPCPPTSPSSPASVPKKQDKCPRDTLKFGVCGSWLGLVT 66

Query: 67  EQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQ 126
           E IG KPSK+CC+L+ GLADLEAALCLCTA+KANVLG+V L+VP+ALSL+VN+CG  +PQ
Sbjct: 67  EVIGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGIVKLEVPVALSLLVNACGGKVPQ 126

Query: 127 GFVC 131
           GFVC
Sbjct: 127 GFVC 130

The following BLAST results are available for this feature:

BLAST of CsaV3_6G009190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140487.1	5.3e-64	100.00	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569....	[more]
XP_008458132.1	8.5e-62	96.92	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo]	[more]
XP_023000073.1	3.8e-54	85.50	putative lipid-binding protein At4g00165 [Cucurbita maxima]	[more]
XP_023514898.1	3.8e-54	86.26	putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo]	[more]
XP_022964428.1	1.1e-53	85.50	putative lipid-binding protein At4g00165 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G009190 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00165.1	1.6e-33	56.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	1.7e-24	64.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	1.7e-24	64.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G45180.1	2.3e-24	61.45	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G12090.1	3.3e-23	60.00	extensin-like protein	[more]

BLAST of CsaV3_6G009190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RW93\|LBP65_ARATH	2.8e-32	56.69	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
sp\|Q01595\|CCDP_MAIZE	1.1e-20	42.52	Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P14009\|14KD_DAUCA	1.5e-20	47.69	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|Q9S7I2\|AIR1_ARATH	2.5e-20	48.89	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]
sp\|Q9SU34\|ERLL2_ARATH	1.2e-19	50.00	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]

BLAST of CsaV3_6G009190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCL7\|A0A0A0KCL7_CUCSA	3.5e-64	100.00	Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=4 SV=1	[more]
tr\|A0A1S3C8D8\|A0A1S3C8D8_CUCME	5.6e-62	96.92	putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659...	[more]
tr\|A0A2P5CLG1\|A0A2P5CLG1_9ROSA	3.8e-42	66.94	HMW glutenin OS=Trema orientalis OX=63057 GN=TorRG33x02_280640 PE=4 SV=1	[more]
tr\|A0A2P5BES0\|A0A2P5BES0_PARAD	7.2e-41	66.40	HMW glutenin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_245410 PE=4 SV=1	[more]
tr\|M5X1J3\|M5X1J3_PRUPE	1.4e-39	66.94	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G139600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G009190.1	CsaV3_6G009190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..130 e-value: 1.9E-5 score: 34.1
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 42..131 e-value: 6.2E-25 score: 88.7
None	No IPR available	PANTHER	PTHR31731:SF28	SUBFAMILY NOT NAMED	coord: 2..130
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 2..130
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 6.0
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 47..131 e-value: 1.7E-26 score: 92.0
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 46..130 e-value: 2.76506E-27 score: 97.3992
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 51..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G009190	CSPI06G08830	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G009190	Cp4.1LG17g03840	Cucurbita pepo (Zucchini)	cpecucB0410
CsaV3_6G009190	CsGy6G008960	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G009190	Cla006664	Watermelon (97103) v1	cucwmB570
CsaV3_6G009190	MELO3C021147	Melon (DHL92) v3.5.1	cucmeB446
CsaV3_6G009190	ClCG06G003080	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G009190	Lsi09G016270	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G009190	MELO3C021147.2	Melon (DHL92) v3.6.1	cucmedB438
CsaV3_6G009190	Cla97C06G112460	Watermelon (97103) v2	cucwmbB487
CsaV3_6G009190	Bhi12G001904	Wax gourd	cucwgoB562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G009190	Silver-seed gourd	carcucB0595
CsaV3_6G009190	Silver-seed gourd	carcucB0638
CsaV3_6G009190	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G009190	Cucurbita maxima (Rimu)	cmacucB0451
CsaV3_6G009190	Cucurbita maxima (Rimu)	cmacucB1069
CsaV3_6G009190	Cucurbita moschata (Rifu)	cmocucB0444
CsaV3_6G009190	Cucurbita moschata (Rifu)	cmocucB1052
CsaV3_6G009190	Cucurbita pepo (Zucchini)	cpecucB0176