Cp4.1LG17g03840 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g03840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
LocationCp4.1LG17 : 2930449 .. 2930844 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTCAGAATTCCAAAGGCTTTGGCTCTTGTAGCCTTGTTGAACATCATAGCTTTGGCTTGTGTTTCATCAGCCAAACCGGGTTGCTCTCCGAAGGTTCAGCCATCGCCTGCTACCACACCGATAGCGAAGGCTAAGTGCCCAAAAGATACACTCAAGTTAGGGGTTTGCGGTAGCTGGCTAGGGCTCATATCTGAGCAGATCGGAGCGAAACCTAGCAAGAAATGTTGTACTTTGTTGAAGGGGTTGGCCGATCTCGAGGCTGCATTGTGTTTGTGCACGGCGCTGAAGGCGAATGTGTTGGGTGTTGTTACCGTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAG

mRNA sequence

ATGGGGCTCAGAATTCCAAAGGCTTTGGCTCTTGTAGCCTTGTTGAACATCATAGCTTTGGCTTGTGTTTCATCAGCCAAACCGGGTTGCTCTCCGAAGGTTCAGCCATCGCCTGCTACCACACCGATAGCGAAGGCTAAGTGCCCAAAAGATACACTCAAGTTAGGGGTTTGCGGTAGCTGGCTAGGGCTCATATCTGAGCAGATCGGAGCGAAACCTAGCAAGAAATGTTGTACTTTGTTGAAGGGGTTGGCCGATCTCGAGGCTGCATTGTGTTTGTGCACGGCGCTGAAGGCGAATGTGTTGGGTGTTGTTACCGTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAG

Coding sequence (CDS)

ATGGGGCTCAGAATTCCAAAGGCTTTGGCTCTTGTAGCCTTGTTGAACATCATAGCTTTGGCTTGTGTTTCATCAGCCAAACCGGGTTGCTCTCCGAAGGTTCAGCCATCGCCTGCTACCACACCGATAGCGAAGGCTAAGTGCCCAAAAGATACACTCAAGTTAGGGGTTTGCGGTAGCTGGCTAGGGCTCATATCTGAGCAGATCGGAGCGAAACCTAGCAAGAAATGTTGTACTTTGTTGAAGGGGTTGGCCGATCTCGAGGCTGCATTGTGTTTGTGCACGGCGCTGAAGGCGAATGTGTTGGGTGTTGTTACCGTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAG

Protein sequence

MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGSWLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQGFVCP
Homology
[Close]
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match: LBP65_ARATH (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-32
Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 1 

Query: 7   KALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGSWLGLIS 66
           ++L ++ LLNI          PG + K  P P     A  KCP+DTLK GVCGSWLGL+S
Sbjct: 8   RSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQ-ATTKCPRDTLKFGVCGSWLGLVS 67

Query: 67  EQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQ 126
           E IG  PS++CC+L+KGLAD EAA+CLCTALK ++LGV  V +P+AL+L++NSCGK++PQ
Sbjct: 68  EVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQ 127

Query: 127 GFVC 131
           GFVC
Sbjct: 128 GFVC 128

[Close]
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-25
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSA-------KPGCSPKVQPSPATTPIAKA-KCPKDT 60
           MG +   ++AL   LNI+  A VSS        KP   PK  P P  TP   A KCP+D 
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKP--KPKPTPKPTPTPYPSAGKCPRDA 60

Query: 61  LKLGVCGSWLGLISEQ-IGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPI 120
           LKLGVC   L L+    IG+ P+  CC+LL+GL +LEAA+CLCTA+KAN+LG   +++PI
Sbjct: 61  LKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPI 120

Query: 121 ALSLVVNSCGKSIPQGFVC 131
           ALSLV+N+CGK +P GF C
Sbjct: 121 ALSLVLNNCGKQVPNGFEC 136

[Close]
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 1 

Query: 9   LALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKA----KCPKDTLKLGVCGSWLGL 68
           +AL   L+++  A     +P CS  V P+P   P   +    +CP D LKL VC   LGL
Sbjct: 5   VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVLGL 64

Query: 69  ISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSI 128
           +  ++G    ++CC LL+GL DL+AALCLCTA+KANVLG + ++VP++L+ ++N+CG+  
Sbjct: 65  V--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGRIC 124

Query: 129 PQGFVCP 132
           P+ F CP
Sbjct: 125 PEDFTCP 128

[Close]
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.0e-20
Identity = 49/102 (48.04%), Postives = 74/102 (72.55%), Query Frame = 1 

Query: 31  SPKVQP-SPATTPIAKAKCPKDTLKLGVCGSWLG-LISEQIGAKPSKKCCTLLKGLADLE 90
           SP  +P +P  TP +   CP D L+LGVC + L  L++ Q+G   ++ CC+L++GL DL+
Sbjct: 67  SPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLD 126

Query: 91  AALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQGFVC 131
           AA+CLCTAL+ANVLG + ++VPI+LS+++N C + +P GF C
Sbjct: 127 AAICLCTALRANVLG-INLNVPISLSVLLNVCNRKVPSGFQC 167

[Close]
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 49/103 (47.57%), Postives = 73/103 (70.87%), Query Frame = 1 

Query: 32  PKVQPSPAT---TPIAKAKCPKDTLKLGVCGSWL-GLISEQIGAKPSKKCCTLLKGLADL 91
           P   P+P T   TP +   CP D L+LGVC + L GL++ Q+G   ++ CC+L++GL DL
Sbjct: 75  PSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDL 134

Query: 92  EAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQGFVC 131
           +AA+CLCTAL+ANVLG + ++VPI+LS+++N C + +P  F C
Sbjct: 135 DAAICLCTALRANVLG-INLNVPISLSVLLNVCNRRLPSDFQC 176

[Close]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match: A0A0A0KCL7_CUCSA (Proline-rich protein DC2.15 OS=Cucumis sativus GN=Csa_6G109650 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-55
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match: M5X1J3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013286mg PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.5e-40
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60
           MG R  +A+ L  L NII L+ VSS K  C P    SPA+ P  + KCP+DTLK GVCGS
Sbjct: 1   MGFRGSQAVVLFILFNIICLSLVSSNKVPCPPTSPSSPASVPKKQDKCPRDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120
           WLGL++E IG KPSK+CCTL+KGLADLEAALCLCTA+KANVLG+V ++VP+ALSL+VN+C
Sbjct: 61  WLGLVTEVIGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGIVKLEVPVALSLLVNAC 120

Query: 121 GKSIPQGFVC 131
           G  +PQGFVC
Sbjct: 121 GGKVPQGFVC 130

[Close]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match: A0A059CIU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02487 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.0e-38
Identity = 82/123 (66.67%), Postives = 97/123 (78.86%), Query Frame = 1 

Query: 9   LALVALLNIIALACVSSAKPGCSPKVQ-PSPATTPIAKAKCPKDTLKLGVCGSWLGLISE 68
           L ++ LLNI+   CVS     C PKV  PSP + P    KCPKDTLK GVCGSWLGL++E
Sbjct: 2   LTILLLLNIMFFTCVSPHNLPCPPKVPVPSPPSAPEQPGKCPKDTLKFGVCGSWLGLVTE 61

Query: 69  QIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQG 128
            IGAKPSK+CCTL+ GLADLEAALCLCTA+KANVLG+V + VP+ALSL+VN CGK +P+G
Sbjct: 62  NIGAKPSKECCTLVAGLADLEAALCLCTAIKANVLGLVKIKVPLALSLLVNGCGKKVPEG 121

Query: 129 FVC 131
           FVC
Sbjct: 122 FVC 124

[Close]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match: W9QP38_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020879 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.8e-37
Identity = 79/123 (64.23%), Postives = 98/123 (79.67%), Query Frame = 1 

Query: 9   LALVALLNIIALACVSSAKPGCSPK-VQPSPATTPIAKAKCPKDTLKLGVCGSWLGLISE 68
           +A++ + N++   CVSS    C PK   P PA  P  + KCP DTLK GVCGSWLG+++E
Sbjct: 15  VAVLIVSNLVFFTCVSSNNVPCPPKGTTPPPANAPKKQGKCPIDTLKFGVCGSWLGVVTE 74

Query: 69  QIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQG 128
            IGAKPS++CC+L+KGLADLEAA CLCTA+KANVLGVV ++VPIALSL+VNSCGK +PQG
Sbjct: 75  VIGAKPSEECCSLIKGLADLEAAFCLCTAIKANVLGVVKLNVPIALSLLVNSCGKKVPQG 134

Query: 129 FVC 131
           FVC
Sbjct: 135 FVC 137

[Close]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match: A0A103XUE1_CYNCS (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_000802 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-36
Identity = 80/120 (66.67%), Postives = 91/120 (75.83%), Query Frame = 1 

Query: 11  LVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGSWLGLISEQIG 70
           L  LLN+IA  CVSS K  C PK       TP   AKCPKDTLK GVCG WLGL+ E IG
Sbjct: 10  LFILLNVIAFTCVSSNKVPCPPKTM-----TPSGSAKCPKDTLKFGVCGDWLGLVHEVIG 69

Query: 71  AKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQGFVC 130
           A+P  +CCTL+KGLADLEAALCLCTA+KANV G++ V VPIALSLV+NSCGK +P+GF C
Sbjct: 70  AQPDSECCTLIKGLADLEAALCLCTAIKANVFGLLKVKVPIALSLVLNSCGKKVPKGFKC 124

[Close]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match: AT4G00165.1 (AT4G00165.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-33
Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 1 

Query: 7   KALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGSWLGLIS 66
           ++L ++ LLNI          PG + K  P P     A  KCP+DTLK GVCGSWLGL+S
Sbjct: 8   RSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQ-ATTKCPRDTLKFGVCGSWLGLVS 67

Query: 67  EQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGKSIPQ 126
           E IG  PS++CC+L+KGLAD EAA+CLCTALK ++LGV  V +P+AL+L++NSCGK++PQ
Sbjct: 68  EVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQ 127

Query: 127 GFVC 131
           GFVC
Sbjct: 128 GFVC 128

[Close]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.4e-28
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1 

Query: 7   KALALVALL---NIIALACVSSAK-PGCSPK---VQPSPATTPIAKAKCPKDTLKLGVCG 66
           KALA+ ALL   N++    V+S K P  +PK      SP   P  K  CP DTLKLGVC 
Sbjct: 4   KALAVTALLITLNLLFFTFVTSTKCPPTTPKPPKTPKSPKKAPAVKPTCPTDTLKLGVCA 63

Query: 67  SWLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNS 126
             LGL++  +G+ P   CCTLL+GLA+LEAA+CLCTALKANVLG + ++VPI L+L++N 
Sbjct: 64  DLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLG-INLNVPIDLTLLLNY 123

Query: 127 CGKSIPQGFVC 131
           CGK +P GF C
Sbjct: 124 CGKKVPHGFQC 133

[Close]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 8.2e-27
Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSA------------KPGCSPKVQPSPATTPI----- 60
           M  R  K+LAL  +LN +    +S+             KP  SPK +P+P   P      
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSP 60

Query: 61  --AKAKCPKDTLKLGVCGSWL-GLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKAN 120
             A AKCP+D LKLGVC + L GL++  +G  P + CCTL++GLADLEAA CLCTALKAN
Sbjct: 61  SPAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

Query: 121 VLGVVTVDVPIALSLVVNSCGKSIPQGFVC 131
           +LG + +++P++LSL++N C K +P+GF C
Sbjct: 121 ILG-INLNIPLSLSLLLNVCSKKVPRGFQC 149

[Close]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCS--PKVQPSPATTPIAKAKCPKDTLKLGVC 60
           M  +I  +L +    NI+     ++   GCS  PK +P P +T      CPKDTLKLGVC
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKPKPKST----GSCPKDTLKLGVC 60

Query: 61  GSWL-GLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVV 120
            + L  L+  Q+G  P K CC+LL GL DLEAA CLCTALKA VLG + ++VP++LSL++
Sbjct: 61  ANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLL 120

Query: 121 NSCGKSIPQGFVC 131
           N CGK +P GFVC
Sbjct: 121 NVCGKKVPSGFVC 128

[Close]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match: AT4G12520.1 (AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCS--PKVQPSPATTPIAKAKCPKDTLKLGVC 60
           M  +I  +L +    NI+     ++   GCS  PK +P P +T      CPKDTLKLGVC
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKPKPKST----GSCPKDTLKLGVC 60

Query: 61  GSWL-GLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVV 120
            + L  L+  Q+G  P K CC+LL GL DLEAA CLCTALKA VLG + ++VP++LSL++
Sbjct: 61  ANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLL 120

Query: 121 NSCGKSIPQGFVC 131
           N CGK +P GFVC
Sbjct: 121 NVCGKKVPSGFVC 128

[Close]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match: gi|449445453|ref|XP_004140487.1| (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 5.2e-55
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60
           M L+  K LALV LLNIIALACVSS KP C PKV+PSPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match: gi|659116557|ref|XP_008458132.1| (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-54
Identity = 112/129 (86.82%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 3   LRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGSWL 62
           L+  K LALV LLNIIALACVSSAKP C PKV+PSPATTP  +AKCPKDTLK GVCGSWL
Sbjct: 4   LKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWL 63

Query: 63  GLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSCGK 122
           GLISEQIG KPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSCGK
Sbjct: 64  GLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123

Query: 123 SIPQGFVCP 132
           SIPQGFVCP
Sbjct: 124 SIPQGFVCP 132

[Close]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match: gi|645253472|ref|XP_008232589.1| (PREDICTED: putative lipid-binding protein At4g00165 [Prunus mume])

HSP 1 Score: 172.2 bits (435), Expect = 6.1e-40
Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60
           MG R  KA+AL  L NII L+ VSS K  C P    SPA+ P  + KCP+DTLK GVCGS
Sbjct: 1   MGFRGSKAVALFILFNIICLSLVSSNKVPCPPTSPSSPASVPKKQDKCPRDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120
           WLGL++E IG KPSK+CCTL+KGLADLEAALCLCTA+KANVLG+V ++VP+ALSL+V++C
Sbjct: 61  WLGLVTEVIGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGIVKLEVPVALSLLVSAC 120

Query: 121 GKSIPQGFVC 131
           G  +PQGFVC
Sbjct: 121 GGKVPQGFVC 130

[Close]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match: gi|1009142950|ref|XP_015889000.1| (PREDICTED: putative lipid-binding protein At4g00165 [Ziziphus jujuba])

HSP 1 Score: 171.8 bits (434), Expect = 8.0e-40
Identity = 86/131 (65.65%), Postives = 103/131 (78.63%), Query Frame = 1 

Query: 1   MGLRI-PKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCG 60
           MG+R+   ALAL  + N++   CVSS    C PK  PSP + P   AKCPKDTLK GVCG
Sbjct: 4   MGIRLCNNALALFVVFNLLLFTCVSSHNLPCPPKSVPSPPSVPKKHAKCPKDTLKFGVCG 63

Query: 61  SWLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNS 120
           SWLGL++E IGAKPSK+CC+LLKGLADLEAA+CLCTA+ ANVLG+V + VP+ALSL+VN 
Sbjct: 64  SWLGLVTEVIGAKPSKECCSLLKGLADLEAAVCLCTAINANVLGLVKLQVPVALSLLVNG 123

Query: 121 CGKSIPQGFVC 131
           CGK IP+GFVC
Sbjct: 124 CGKKIPEGFVC 134

[Close]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match: gi|596010871|ref|XP_007218590.1| (hypothetical protein PRUPE_ppa013286mg [Prunus persica])

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39
Identity = 85/130 (65.38%), Postives = 103/130 (79.23%), Query Frame = 1 

Query: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60
           MG R  +A+ L  L NII L+ VSS K  C P    SPA+ P  + KCP+DTLK GVCGS
Sbjct: 1   MGFRGSQAVVLFILFNIICLSLVSSNKVPCPPTSPSSPASVPKKQDKCPRDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120
           WLGL++E IG KPSK+CCTL+KGLADLEAALCLCTA+KANVLG+V ++VP+ALSL+VN+C
Sbjct: 61  WLGLVTEVIGTKPSKECCTLIKGLADLEAALCLCTAIKANVLGIVKLEVPVALSLLVNAC 120

Query: 121 GKSIPQGFVC 131
           G  +PQGFVC
Sbjct: 121 GGKVPQGFVC 130

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g03840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBP65_ARATH3.6e-3256.45Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE... [more]
14KD_DAUCA5.6e-2550.3614 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1[more]
CCDP_MAIZE2.2e-2143.31Cortical cell-delineating protein OS=Zea mays PE=2 SV=1[more]
ERLI1_ARATH7.0e-2048.04Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1[more]
ERLL3_ARATH1.2e-1947.57pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ... [more]
BLAST of Cp4.1LG17g03840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCL7_CUCSA3.6e-5586.26Proline-rich protein DC2.15 OS=Cucumis sativus GN=Csa_6G109650 PE=4 SV=1[more]
M5X1J3_PRUPE9.5e-4065.38Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013286mg PE=4 SV=1[more]
A0A059CIU3_EUCGR4.0e-3866.67Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02487 PE=4 SV=1[more]
W9QP38_9ROSA9.8e-3764.23Uncharacterized protein OS=Morus notabilis GN=L484_020879 PE=4 SV=1[more]
A0A103XUE1_CYNCS2.2e-3666.67Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-... [more]
BLAST of Cp4.1LG17g03840 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00165.12.0e-3356.45 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G45180.14.4e-2853.44 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G62510.18.2e-2745.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT4G12510.11.1e-2649.62 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT4G12520.11.1e-2649.62 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cp4.1LG17g03840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445453|ref|XP_004140487.1|5.2e-5586.26PREDICTED: putative lipid-binding protein At4g00165 [Cucumis sativus][more]
gi|659116557|ref|XP_008458132.1|2.0e-5486.82PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo][more]
gi|645253472|ref|XP_008232589.1|6.1e-4066.15PREDICTED: putative lipid-binding protein At4g00165 [Prunus mume][more]
gi|1009142950|ref|XP_015889000.1|8.0e-4065.65PREDICTED: putative lipid-binding protein At4g00165 [Ziziphus jujuba][more]
gi|596010871|ref|XP_007218590.1|1.4e-3965.38hypothetical protein PRUPE_ppa013286mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027923Hydrophob_seed
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g03840.1Cp4.1LG17g03840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 48..130
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 51..131
score: 6.12
IPR027923Hydrophobic seed proteinPFAMPF14547Hydrophob_seedcoord: 47..131
score: 5.7
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 46..131
score: 1.5
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 1..130
score: 7.2
NoneNo IPR availablePANTHERPTHR31731:SF21SUBFAMILY NOT NAMEDcoord: 1..130
score: 7.2
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g03840CmaCh08G008620Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g03840CmoCh08G008310Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g03840Cla006664Watermelon (97103) v1cpewmB335
Cp4.1LG17g03840ClCG06G003080Watermelon (Charleston Gray)cpewcgB299
Cp4.1LG17g03840Lsi09G016270Bottle gourd (USVL1VR-Ls)cpelsiB248
Cp4.1LG17g03840CsaV3_6G009190Cucumber (Chinese Long) v3cpecucB0410
Cp4.1LG17g03840Bhi12G001904Wax gourdcpewgoB0381
Cp4.1LG17g03840CsGy6G008960Cucumber (Gy14) v2cgybcpeB790
Cp4.1LG17g03840Carg13870Silver-seed gourdcarcpeB0851
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g03840Cucurbita pepo (Zucchini)cpecpeB159
Cp4.1LG17g03840Cucumber (Gy14) v1cgycpeB0295
Cp4.1LG17g03840Cucurbita maxima (Rimu)cmacpeB378
Cp4.1LG17g03840Cucurbita moschata (Rifu)cmocpeB341
Cp4.1LG17g03840Wild cucumber (PI 183967)cpecpiB329
Cp4.1LG17g03840Cucumber (Chinese Long) v2cpecuB328
Cp4.1LG17g03840Melon (DHL92) v3.5.1cpemeB285
Cp4.1LG17g03840Melon (DHL92) v3.6.1cpemedB333