CsaV3_6G006590 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G006590
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Haloacid dehalogenase-like hydrolase family protein, putative, expressed
Location	chr6 : 5460106 .. 5462168 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAATCGTAATTTAAAGTGTGACTCTTTTCTATATTACATACAACTTTATTTACATTTTGTAGTTATAAGCAATCTAACATTATTTAGTTTTGTGATCCATTCCAAAGATTAATTAATTATATTTACACCATTTTTCATCGAGATTTAGTTAGTAACGAAGAACTATATGCATACTTAAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAAGGATTGAGTGAGTATGAAGTGAGGTTTGTGGTTCACACATTAATTCAAAACAAAAGCAATGCAATCTCTTCATCATCCCACTGTTATCCCTTTACCATTTGCTCCTCATCCCCAGTCCCACACTCTCCATTTTTTCAACAAACAACATATCTCCTCCTCCATTTTTAGTACTCGTTCATATCTCACCCGCACCCGCTGTTCTCCGCCATCTCCCGCCACCACCGTAGTCTCCACCAGCAGGTACTCAACTCTCTTCACCTGCTCTCCCTTTACTTCATTACATCCTTAGTGTGTGCTGTGTTTGTATAGGATGTAATAATTTATGAAGAAATTGAAAAGGGAAAGATGAACTATATGTCATTATTATTATTATTATTGTCACACAGCTTGTGGGAGAAGGGGCCTATTGAAGGTGTTCTGTTTGATATTGATGGAACATTATGCGATTCTGATCCTCTTCACTTCTATGCCTTCCGCCAAATGCTTCAACAGGTCTTATCCATCCCCCACCACTTTTCTTTTCTTTTACAAAAAGTAAACTATAAATGAATTAACATCCAATTAATTAACATATTCAGAATCAATTAATAAAAAGAGAAATGGGGTAGTGATATATGCAGGTTGGATTCAACAATGGAGTCCCAATTAGTGAGGAATTTTTCATAGAAAACATAAGTGGAAGGCACAATGAAGACCTTTGTGGCATTCTCCTCCCAGATTGGGACCTACCTAAAGCTAGAAATTTCTTTCAACATAAGGAAGCTTATTTTTGCAGGTATATATATATGTGTATATATATATATATATATATATCATCACTCAGCTCAACCAATAATTCAGTTCGGTTTGATAATCATATATGTAGCAGTTACCAAACGTGTATGTATAGACTTTTTTTTTAATTGTCAATTTTAATAAGAAAAAAGTATGAAGATTGCAAAAGAGAAAAAAAAAATCTCTATAACTAAACACACACATAATAATATAGATTGGCAGAAGAGCAGTTGGAAGCCATAGAAGGGCTGGACAAGGTCTGCAAATGGATAGAGGAGCGTGGGATTAAACGCGCTGCCGTGACCAATGCTCCAAGACCGAACGCCGAGCTGATTTTGTCGATGCTTAAACTTACGGATTTCTTTGAAGAAGTGATCATAGGGAACGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTGAAGGCTCTTCAAGCTCTTCAACTCTCTCCTCAACGTTCTTTTGTCTTTGAGGTTCACTTCTACCTTCTCATTACTGATTTGTTGAAGTGGATCATAAAAAAGTGGTTTGAGAACACAATTCATAAAGTTTTTACTACACCGTGAACTCAGAAACTTCTAAACTACAAAACCATGCAAACGAATGAAAAGTAAATAATGCAAAGTAAAAGATTAATACTATATTGAAATCTTTAGATTGGGATGAACACAGGATTCGGTATCAGGAATAAAAGCAGGAGTGGGAGCTGGAATGAGAGTGGTTGGTGTGGGAAGAAGAAACCCAAAAGAATTATTACAAGAAGCTGGAGCCACTTTTGTAATTCAAGATTTCAATGATCCAATTCTTTGGACCCAACTACTCTTTTAATTTTATATTAATTCATTGATCCTGATCTCATTTTCTTCCTTTTAATATACTGTTCTTATTTCATGCACTTCATCTGTTCTTATTCTCCATTTATATCATTATCTAAACATAATATAATCTGATAATCAAATTCATGATATCAACAGATTCAAATTTACCCTATATGGATATATATATAACTTAATTTCAATGTGTTTATTTAGAGTTGTTAGGAGATTAACATCCA

mRNA sequence

ATGCAGGTTGGATTCAACAATGGAGTCCCAATTAGTGAGGAATTTTTCATAGAAAACATAAGTGGAAGGCACAATGAAGACCTTTGTGGCATTCTCCTCCCAGATTGGGACCTACCTAAAGCTAGAAATTTCTTTCAACATAAGGAAGCTTATTTTTGCAGATTGGCAGAAGAGCAGTTGGAAGCCATAGAAGGGCTGGACAAGGTCTGCAAATGGATAGAGGAGCGTGGGATTAAACGCGCTGCCGTGACCAATGCTCCAAGACCGAACGCCGAGCTGATTTTGTCGATGCTTAAACTTACGGATTTCTTTGAAGAAGTGATCATAGGGAACGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTGAAGGCTCTTCAAGCTCTTCAACTCTCTCCTCAACGTTCTTTTGTCTTTGAGGATTCGGTATCAGGAATAAAAGCAGGAGTGGGAGCTGGAATGAGAGTGGTTGGTGTGGGAAGAAGAAACCCAAAAGAATTATTACAAGAAGCTGGAGCCACTTTTGTAATTCAAGATTTCAATGATCCAATTCTTTGGACCCAACTACTCTTTTAA

Coding sequence (CDS)

ATGCAGGTTGGATTCAACAATGGAGTCCCAATTAGTGAGGAATTTTTCATAGAAAACATAAGTGGAAGGCACAATGAAGACCTTTGTGGCATTCTCCTCCCAGATTGGGACCTACCTAAAGCTAGAAATTTCTTTCAACATAAGGAAGCTTATTTTTGCAGATTGGCAGAAGAGCAGTTGGAAGCCATAGAAGGGCTGGACAAGGTCTGCAAATGGATAGAGGAGCGTGGGATTAAACGCGCTGCCGTGACCAATGCTCCAAGACCGAACGCCGAGCTGATTTTGTCGATGCTTAAACTTACGGATTTCTTTGAAGAAGTGATCATAGGGAACGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTGAAGGCTCTTCAAGCTCTTCAACTCTCTCCTCAACGTTCTTTTGTCTTTGAGGATTCGGTATCAGGAATAAAAGCAGGAGTGGGAGCTGGAATGAGAGTGGTTGGTGTGGGAAGAAGAAACCCAAAAGAATTATTACAAGAAGCTGGAGCCACTTTTGTAATTCAAGATTTCAATGATCCAATTCTTTGGACCCAACTACTCTTTTAA

Protein sequence

MQVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLEAIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPDPYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDFNDPILWTQLLF

Homology

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BLAST of CsaV3_6G006590 vs. NCBI nr
Match: XP_011656719.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 3.4e-107
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE
Sbjct: 96  QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 155

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD
Sbjct: 156 AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 215

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF
Sbjct: 216 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 275

Query: 182 NDPILWTQLLF 193
           NDPILWTQLLF
Sbjct: 276 NDPILWTQLLF 286

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BLAST of CsaV3_6G006590 vs. NCBI nr
Match: XP_008460065.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 2.7e-101
Identity = 182/191 (95.29%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFNNGVPISE+FFIENISGRHNEDLCGILLPDWDLPKAR F QHKEAYFCRLA EQLE
Sbjct: 93  QVGFNNGVPISEDFFIENISGRHNEDLCGILLPDWDLPKARKFLQHKEAYFCRLAAEQLE 152

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFE VIIGNECERAKPFPD
Sbjct: 153 AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEVVIIGNECERAKPFPD 212

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNP+ELL+EAGATFVIQDF
Sbjct: 213 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPQELLKEAGATFVIQDF 272

Query: 182 NDPILWTQLLF 193
           ND  LWTQLLF
Sbjct: 273 NDQNLWTQLLF 283

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BLAST of CsaV3_6G006590 vs. NCBI nr
Match: XP_023000617.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 5.0e-95
Identity = 168/190 (88.42%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFN+GVPI+EEFFIENISGRHNEDLCGILLP+WDLPKAR F Q KE YFCRLAEEQLE
Sbjct: 91  QVGFNHGVPINEEFFIENISGRHNEDLCGILLPNWDLPKARKFLQDKETYFCRLAEEQLE 150

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLT+FFE VIIGNECERAKPFPD
Sbjct: 151 AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTNFFEVVIIGNECERAKPFPD 210

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQ+SPQ +FVFEDSVSG+KAGVGAGM V+G+GRRNP+ELL+EAGA+FVI+DF
Sbjct: 211 PYLKALQALQVSPQHAFVFEDSVSGVKAGVGAGMEVIGIGRRNPEELLKEAGASFVIRDF 270

Query: 182 NDPILWTQLL 192
           ND  LWTQLL
Sbjct: 271 NDQNLWTQLL 280

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BLAST of CsaV3_6G006590 vs. NCBI nr
Match: XP_023514863.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 2.1e-93
Identity = 167/190 (87.89%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFNNGVPI+EEFFIENISGRHNEDLCGILLP+WDLPKAR F Q KE YFCRLAEEQLE
Sbjct: 91  QVGFNNGVPINEEFFIENISGRHNEDLCGILLPNWDLPKARKFLQDKETYFCRLAEEQLE 150

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKV KWIEERGIKRAAVTNAPRPNAELILSML+LT+FFE VIIGNECERAKPFPD
Sbjct: 151 AIEGLDKVRKWIEERGIKRAAVTNAPRPNAELILSMLELTNFFEAVIIGNECERAKPFPD 210

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQ+SPQ +FVFEDSVSG+KAGVGAGM V+G+GRRNP ELL+EAGA FVI+DF
Sbjct: 211 PYLKALQALQVSPQHAFVFEDSVSGVKAGVGAGMEVIGIGRRNPDELLKEAGARFVIRDF 270

Query: 182 NDPILWTQLL 192
           ND  LWTQLL
Sbjct: 271 NDQNLWTQLL 280

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BLAST of CsaV3_6G006590 vs. NCBI nr
Match: XP_022964402.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita moschata])

HSP 1 Score: 350.1 bits (897), Expect = 4.7e-93
Identity = 166/190 (87.37%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFNNGVPI+EEFFIENISGRHNEDLC ILLP+WDLPKAR F Q KE YFCRLAEEQLE
Sbjct: 88  QVGFNNGVPINEEFFIENISGRHNEDLCAILLPNWDLPKARKFLQDKETYFCRLAEEQLE 147

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKVCKWIEE  IKRAAVTNAPRPNAELILSMLKLT+FFE VIIGNECERAKPFPD
Sbjct: 148 AIEGLDKVCKWIEECRIKRAAVTNAPRPNAELILSMLKLTNFFEVVIIGNECERAKPFPD 207

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQ+SPQ +FVFEDSVSG+KAGVGAGM V+G+GRRNP+ELL+EAGA+FVI+DF
Sbjct: 208 PYLKALQALQVSPQHAFVFEDSVSGVKAGVGAGMEVIGIGRRNPEELLKEAGASFVIRDF 267

Query: 182 NDPILWTQLL 192
           ND  LWTQLL
Sbjct: 268 NDQNLWTQLL 277

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BLAST of CsaV3_6G006590 vs. TAIR10
Match: AT2G38740.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-58
Identity = 101/189 (53.44%), Postives = 141/189 (74.60%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           ++GFNNGVPI E+FF+ENI+G+HN ++  +L PD D+ +   F   KEA + ++  E+++
Sbjct: 50  EIGFNNGVPIDEKFFVENIAGKHNSEIALLLFPD-DVSRGLKFCDEKEALYRKIVAEKIK 109

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            ++GL K+ KWIE+RG+KRAAVTNAP+ NAEL++S L LTDFF+ VI+G+ECE  KP P 
Sbjct: 110 PLDGLIKLTKWIEDRGLKRAAVTNAPKENAELMISKLGLTDFFQAVILGSECEFPKPHPG 169

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKAL+ L +S + + VFEDS+SGIKAGV AGM V+G+   NP  LL +A   F+I+++
Sbjct: 170 PYLKALEVLNVSKEHTLVFEDSISGIKAGVAAGMPVIGLTTGNPASLLMQAKPAFLIENY 229

Query: 182 NDPILWTQL 191
            DP LW  L
Sbjct: 230 ADPKLWAVL 237

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BLAST of CsaV3_6G006590 vs. TAIR10
Match: AT4G21470.1 (riboflavin kinase/FMN hydrolase)

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-11
Identity = 36/142 (25.35%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 20  ISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLEAIEGLDKVCKWIEERGIK 79
           I G+   +    ++ D++LP   + F  +         ++++++ G +++ + ++  G+ 
Sbjct: 52  IVGKTPVEAATTIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVP 111

Query: 80  RAAVTNAPRPNAELILSMLK-LTDFFEEVIIGNECERAKPFPDPYLKALQALQLSPQRSF 139
            A  +N+ R N E  +S  +   + F  ++  +E  + KP PD +L+A + L+  P    
Sbjct: 112 VALASNSSRANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCL 171

Query: 140 VFEDSVSGIKAGVGAGMRVVGV 161
           V EDSV G+ AG  AG +V+ V
Sbjct: 172 VIEDSVPGVMAGKAAGTKVIAV 193

[Close]

BLAST of CsaV3_6G006590 vs. TAIR10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 68  KVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPDPYLKAL 127
           KV K I+E G+K A V+N        +L  L+  D+F+ V +  E E  KP P  +LKA 
Sbjct: 180 KVFKAIKEAGVKVAIVSNFD-TRLRPLLRALRCEDWFDAVAVSAEVEAEKPNPTIFLKAC 239

Query: 128 QALQLSPQ 136
           + L+++P+
Sbjct: 240 ELLEVNPE 246

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BLAST of CsaV3_6G006590 vs. Swiss-Prot
Match: sp|Q9ZVJ5|SGGP_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 3.7e-57
Identity = 101/189 (53.44%), Postives = 141/189 (74.60%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           ++GFNNGVPI E+FF+ENI+G+HN ++  +L PD D+ +   F   KEA + ++  E+++
Sbjct: 50  EIGFNNGVPIDEKFFVENIAGKHNSEIALLLFPD-DVSRGLKFCDEKEALYRKIVAEKIK 109

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            ++GL K+ KWIE+RG+KRAAVTNAP+ NAEL++S L LTDFF+ VI+G+ECE  KP P 
Sbjct: 110 PLDGLIKLTKWIEDRGLKRAAVTNAPKENAELMISKLGLTDFFQAVILGSECEFPKPHPG 169

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKAL+ L +S + + VFEDS+SGIKAGV AGM V+G+   NP  LL +A   F+I+++
Sbjct: 170 PYLKALEVLNVSKEHTLVFEDSISGIKAGVAAGMPVIGLTTGNPASLLMQAKPAFLIENY 229

Query: 182 NDPILWTQL 191
            DP LW  L
Sbjct: 230 ADPKLWAVL 237

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BLAST of CsaV3_6G006590 vs. Swiss-Prot
Match: sp|Q9X0Y1|P1254_THEMA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) OX=243274 GN=TM_1254 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-12
Identity = 42/128 (32.81%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 54  RLAEEQLEAIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNEC 113
           R+  E L+   G+ +  ++++ + IK A  T+ P+  A   L  L L  +F+ ++ G++ 
Sbjct: 77  RVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQV 136

Query: 114 ERAKPFPDPYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGM-RVVGVGRR-NPKELLQE 173
           +  KP P+ YL  L+ L + P++  VFEDS SG++A   AG+ R+ GV    N  + L E
Sbjct: 137 KNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLE 196

Query: 174 AGATFVIQ 180
           AGA  +++
Sbjct: 197 AGAVALVK 204

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BLAST of CsaV3_6G006590 vs. Swiss-Prot
Match: sp|O33513|CBBY_RHOCA (Protein CbbY OS=Rhodobacter capsulatus OX=1061 GN=cbbY PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-10
Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 37  DLPKARNFFQHKEAYFCRLAEEQLEAIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILS 96
           DL KA+      + Y   +A  Q+  + G+ ++    +  G++ A  T   R N + +++
Sbjct: 74  DLHKAKT-----QRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIATTTTRANVDALIA 133

Query: 97  ML---KLTDFFEEVIIGNECERAKPFPDPYLKALQALQLSPQRSFVFEDSVSGIKAGVGA 156
                   D FE +  G+E  + KP PD YL+ALQ L L P     FEDS +G+ +   A
Sbjct: 134 ATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFEDSRAGLASARAA 193

Query: 157 GMRVV 159
           G+RVV
Sbjct: 194 GLRVV 193

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BLAST of CsaV3_6G006590 vs. Swiss-Prot
Match: sp|Q84MD8|FHYRK_ARATH (Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana OX=3702 GN=FHY PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 36/142 (25.35%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 20  ISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLEAIEGLDKVCKWIEERGIK 79
           I G+   +    ++ D++LP   + F  +         ++++++ G +++ + ++  G+ 
Sbjct: 52  IVGKTPVEAATTIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVP 111

Query: 80  RAAVTNAPRPNAELILSMLK-LTDFFEEVIIGNECERAKPFPDPYLKALQALQLSPQRSF 139
            A  +N+ R N E  +S  +   + F  ++  +E  + KP PD +L+A + L+  P    
Sbjct: 112 VALASNSSRANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCL 171

Query: 140 VFEDSVSGIKAGVGAGMRVVGV 161
           V EDSV G+ AG  AG +V+ V
Sbjct: 172 VIEDSVPGVMAGKAAGTKVIAV 193

[Close]

BLAST of CsaV3_6G006590 vs. Swiss-Prot
Match: sp|Q3J8A0|GPH_NITOC (Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_2493 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 40/153 (26.14%), Postives = 70/153 (45.75%), Query Frame = 0


Query: 7   NGVP-ISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLEAIEG 66
           NGV  + +   ++N+ G   EDL           KA   F    A +     ++     G
Sbjct: 50  NGVERLIKRALVDNMEGEPEEDL---------YQKAETIFL---ALYADNTSKRSHLYPG 109

Query: 67  LDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPDPYLK 126
           +++   W++ +G +   VTN        +L+ L + D+FE VI G+     KP P P L 
Sbjct: 110 VNEGLAWLKSQGYRVGCVTNKAAQFTYPLLTELGIIDYFEIVISGDTLPEKKPHPAPLLH 169

Query: 127 ALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVV 159
           A     ++P+++ +  DS+S +KA   A  ++V
Sbjct: 170 AASHFGIAPEKALMIGDSISDVKAARAANFQIV 190

[Close]

BLAST of CsaV3_6G006590 vs. TrEMBL
Match: tr|A0A1S3CB79|A0A1S3CB79_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498987 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.8e-101
Identity = 182/191 (95.29%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           QVGFNNGVPISE+FFIENISGRHNEDLCGILLPDWDLPKAR F QHKEAYFCRLA EQLE
Sbjct: 93  QVGFNNGVPISEDFFIENISGRHNEDLCGILLPDWDLPKARKFLQHKEAYFCRLAAEQLE 152

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
           AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFE VIIGNECERAKPFPD
Sbjct: 153 AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEVVIIGNECERAKPFPD 212

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNP+ELL+EAGATFVIQDF
Sbjct: 213 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPQELLKEAGATFVIQDF 272

Query: 182 NDPILWTQLLF 193
           ND  LWTQLLF
Sbjct: 273 NDQNLWTQLLF 283

[Close]

BLAST of CsaV3_6G006590 vs. TrEMBL
Match: tr|A0A2P4JPH9|A0A2P4JPH9_QUESU (Haloacid dehalogenase-like hydrolase domain-containing protein sgpp OS=Quercus suber OX=58331 GN=CFP56_69771 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.9e-75
Identity = 130/189 (68.78%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           ++GFN GVPI+EEFFI+NISG+HNE+LCG+LLP+WDL +AR F   KEA+F RLA E LE
Sbjct: 61  EIGFNGGVPITEEFFIKNISGKHNEELCGVLLPNWDLQRARKFMDDKEAFFRRLASEHLE 120

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            ++GL+K+CKWIEERG+KRAAVTNA R NAEL++S L L+DFFE V++ N+CER KPFPD
Sbjct: 121 PVKGLNKLCKWIEERGLKRAAVTNAERSNAELLISALGLSDFFEVVVLANDCERQKPFPD 180

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYL+ALQ L++SP+ +FVFEDSVSG+KAGV AGM VVG+G RNP++ L +AGA+FVI DF
Sbjct: 181 PYLRALQVLEVSPKHTFVFEDSVSGVKAGVAAGMPVVGMGLRNPEKSLADAGASFVINDF 240

Query: 182 NDPILWTQL 191
           NDP LWT L
Sbjct: 241 NDPKLWTAL 249

[Close]

BLAST of CsaV3_6G006590 vs. TrEMBL
Match: tr|A0A1U8B2P5|A0A1U8B2P5_NELNU (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104606428 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.0e-75
Identity = 133/189 (70.37%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           +VGFN+GVPISEEFFIENISG+HNED+C IL PDWDL K+  F   KEA F RLA EQL+
Sbjct: 49  EVGFNDGVPISEEFFIENISGKHNEDICHILFPDWDLKKSLKFMDDKEAMFRRLASEQLK 108

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            + GL+K+CKWI++RG+KRAAVTNAPRPNAEL++S+L L+DFFE +++G+ECERAKPFPD
Sbjct: 109 PVSGLNKLCKWIKDRGLKRAAVTNAPRPNAELMISILGLSDFFETLVVGSECERAKPFPD 168

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYL+AL+AL+ SP  SFVFEDSVSGIKAGV AGM VVG+  RNP+ELL +A ATF+I+DF
Sbjct: 169 PYLEALKALKASPNHSFVFEDSVSGIKAGVAAGMPVVGLTTRNPEELLSKAWATFLIKDF 228

Query: 182 NDPILWTQL 191
            DP LW+ L
Sbjct: 229 EDPKLWSAL 237

[Close]

BLAST of CsaV3_6G006590 vs. TrEMBL
Match: tr|A0A1U8AQI5|A0A1U8AQI5_NELNU (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104606428 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.0e-75
Identity = 133/189 (70.37%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           +VGFN+GVPISEEFFIENISG+HNED+C IL PDWDL K+  F   KEA F RLA EQL+
Sbjct: 4   EVGFNDGVPISEEFFIENISGKHNEDICHILFPDWDLKKSLKFMDDKEAMFRRLASEQLK 63

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            + GL+K+CKWI++RG+KRAAVTNAPRPNAEL++S+L L+DFFE +++G+ECERAKPFPD
Sbjct: 64  PVSGLNKLCKWIKDRGLKRAAVTNAPRPNAELMISILGLSDFFETLVVGSECERAKPFPD 123

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYL+AL+AL+ SP  SFVFEDSVSGIKAGV AGM VVG+  RNP+ELL +A ATF+I+DF
Sbjct: 124 PYLEALKALKASPNHSFVFEDSVSGIKAGVAAGMPVVGLTTRNPEELLSKAWATFLIKDF 183

Query: 182 NDPILWTQL 191
            DP LW+ L
Sbjct: 184 EDPKLWSAL 192

[Close]

BLAST of CsaV3_6G006590 vs. TrEMBL
Match: tr|W9RTW5|W9RTW5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023895 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.5e-74
Identity = 131/189 (69.31%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 2   QVGFNNGVPISEEFFIENISGRHNEDLCGILLPDWDLPKARNFFQHKEAYFCRLAEEQLE 61
           +VGFN G+ I+EEFF+ NISG HNE+LC +LLPDWDL +AR F + KE  F RLA EQL+
Sbjct: 47  EVGFNGGITITEEFFVNNISGMHNEELCRVLLPDWDLQRARKFMEDKEDLFRRLAAEQLK 106

Query: 62  AIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTDFFEEVIIGNECERAKPFPD 121
            ++GL+ +CKWIEERG+KRAAVTNAPRPNAELI+S+L LT+FFE ++IGNEC+RAKPFPD
Sbjct: 107 PVQGLENLCKWIEERGLKRAAVTNAPRPNAELIISILDLTNFFEILVIGNECDRAKPFPD 166

Query: 122 PYLKALQALQLSPQRSFVFEDSVSGIKAGVGAGMRVVGVGRRNPKELLQEAGATFVIQDF 181
           PYLKALQAL++S +  FV EDSVSG+KAGV AGM VVG+G RNP+ LL +AGA+FVI+DF
Sbjct: 167 PYLKALQALEVSQEHVFVLEDSVSGVKAGVAAGMPVVGLGTRNPENLLLDAGASFVIKDF 226

Query: 182 NDPILWTQL 191
           +DP LWT L
Sbjct: 227 DDPKLWTAL 235

The following BLAST results are available for this feature:

BLAST of CsaV3_6G006590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656719.1	3.4e-107	100.00	PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [...	[more]
XP_008460065.1	2.7e-101	95.29	PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp i...	[more]
XP_023000617.1	5.0e-95	88.42	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita m...	[more]
XP_023514863.1	2.1e-93	87.89	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita p...	[more]
XP_022964402.1	4.7e-93	87.37	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita m...	[more]

BLAST of CsaV3_6G006590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38740.1	2.1e-58	53.44	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT4G21470.1	9.3e-11	25.35	riboflavin kinase/FMN hydrolase	[more]
AT2G41250.1	4.5e-05	36.76	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

BLAST of CsaV3_6G006590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVJ5\|SGGP_ARATH	3.7e-57	53.44	Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidops...	[more]
sp\|Q9X0Y1\|P1254_THEMA	3.6e-12	32.81	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ...	[more]
sp\|O33513\|CBBY_RHOCA	4.4e-10	32.00	Protein CbbY OS=Rhodobacter capsulatus OX=1061 GN=cbbY PE=3 SV=1	[more]
sp\|Q84MD8\|FHYRK_ARATH	1.7e-09	25.35	Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q3J8A0\|GPH_NITOC	2.9e-09	26.14	Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 1...	[more]

BLAST of CsaV3_6G006590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CB79\|A0A1S3CB79_CUCME	1.8e-101	95.29	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 O...	[more]
tr\|A0A2P4JPH9\|A0A2P4JPH9_QUESU	2.9e-75	68.78	Haloacid dehalogenase-like hydrolase domain-containing protein sgpp OS=Quercus s...	[more]
tr\|A0A1U8B2P5\|A0A1U8B2P5_NELNU	5.0e-75	70.37	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 O...	[more]
tr\|A0A1U8AQI5\|A0A1U8AQI5_NELNU	5.0e-75	70.37	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 O...	[more]
tr\|W9RTW5\|W9RTW5_9ROSA	1.5e-74	69.31	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023895 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036412	HAD-like_sf
IPR023198	PGP-like_dom2
IPR006439	HAD-SF_hydro_IA
IPR023214	HAD_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G006590.1	CsaV3_6G006590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD superfamily	GENE3D	G3DSA:3.40.50.1000		coord: 59..183 e-value: 2.2E-42 score: 146.9
None	No IPR available	PFAM	PF13419	HAD_2	coord: 49..160 e-value: 2.3E-21 score: 76.6
None	No IPR available	PANTHER	PTHR18901:SF48	SUBFAMILY NOT NAMED	coord: 2..189
None	No IPR available	PANTHER	PTHR18901	2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2	coord: 2..189
None	No IPR available	CDD	cd07505	HAD_BPGM-like	coord: 27..160 e-value: 2.65884E-35 score: 121.954
IPR006439	HAD hydrolase, subfamily IA	TIGRFAM	TIGR01509	TIGR01509	coord: 46..160 e-value: 1.3E-13 score: 49.4
IPR023198	Phosphoglycolate phosphatase-like, domain 2	GENE3D	G3DSA:1.10.150.240		coord: 10..58 e-value: 2.2E-42 score: 146.9
IPR036412	HAD-like superfamily	SUPERFAMILY	SSF56784	HAD-like	coord: 8..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G006590	CSPI06G06250	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G006590	Cucsa.362390	Cucumber (Gy14) v1	cgycucB556
CsaV3_6G006590	CmaCh08G009710	Cucurbita maxima (Rimu)	cmacucB1075
CsaV3_6G006590	CmoCh08G009400	Cucurbita moschata (Rifu)	cmocucB1057
CsaV3_6G006590	Cp4.1LG17g02700	Cucurbita pepo (Zucchini)	cpecucB0396
CsaV3_6G006590	CsGy6G006260	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G006590	Carg11072	Silver-seed gourd	carcucB1128
CsaV3_6G006590	Cla006998	Watermelon (97103) v1	cucwmB562
CsaV3_6G006590	MELO3C022462	Melon (DHL92) v3.5.1	cucmeB444
CsaV3_6G006590	ClCG06G000790	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G006590	Lsi09G018620	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G006590	MELO3C022462.2	Melon (DHL92) v3.6.1	cucmedB435
CsaV3_6G006590	Cla97C06G110050	Watermelon (97103) v2	cucwmbB487
CsaV3_6G006590	Bhi12G002235	Wax gourd	cucwgoB561

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G006590	Melon (DHL92) v3.5.1	cucmeB506
CsaV3_6G006590	Melon (DHL92) v3.6.1	cucmedB493
CsaV3_6G006590	Watermelon (Charleston Gray)	cucwcgB490
CsaV3_6G006590	Watermelon (97103) v1	cucwmB517
CsaV3_6G006590	Watermelon (97103) v2	cucwmbB478
CsaV3_6G006590	Wax gourd	cucwgoB572
CsaV3_6G006590	Cucumber (Chinese Long) v3	cuccucB137
CsaV3_6G006590	Silver-seed gourd	carcucB0263
CsaV3_6G006590	Silver-seed gourd	carcucB0654
CsaV3_6G006590	Silver-seed gourd	carcucB1004
CsaV3_6G006590	Cucumber (Gy14) v2	cgybcucB142
CsaV3_6G006590	Cucumber (Gy14) v1	cgycucB398
CsaV3_6G006590	Cucurbita maxima (Rimu)	cmacucB0313
CsaV3_6G006590	Cucurbita maxima (Rimu)	cmacucB0441
CsaV3_6G006590	Cucurbita maxima (Rimu)	cmacucB0996
CsaV3_6G006590	Cucurbita moschata (Rifu)	cmocucB0308
CsaV3_6G006590	Cucurbita moschata (Rifu)	cmocucB0434
CsaV3_6G006590	Cucurbita moschata (Rifu)	cmocucB0980
CsaV3_6G006590	Cucurbita pepo (Zucchini)	cpecucB0167
CsaV3_6G006590	Cucurbita pepo (Zucchini)	cpecucB0785
CsaV3_6G006590	Cucurbita pepo (Zucchini)	cpecucB1077
CsaV3_6G006590	Wild cucumber (PI 183967)	cpicucB178
CsaV3_6G006590	Bottle gourd (USVL1VR-Ls)	cuclsiB491