Carg11072 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCTCTTCATCATCCGACCATCGTCCCTCGACGTTCTACTCCTCATCCCCACACCCACCGCACCCGCCACCATTTTTGCAGCCATTTCCCCTCCAGTCTTCCACATCTTCGCCGCCCTCCGCCAGCTCCGGCCGCGGTTGTCTCCCCAAGCAGGTACTCACAGCTCCTTCCTCCCTCCTCCGACTGGTATTGTGGGATTCATGCAATTAGGAAGAATTTGAAGGGGCTCATGTGCAAATAAAATAAAGTTTGTTGAGGGATTGAATTGTTATTTTAATATTCTCAGCTCGTGGGAGAAGGGCCCTATTGAAGCTCTTCTGTTTGACATTGATGGAACACTTTGTGATTCTGATCCTCTCCACTTCTACGCCTTCCGCCAAATGCTTCAACAGGTCTCTCCCTTTTTATTAAATTAAAATTTTAATAATTGCATTAGCTTCATGTTTAATAAATTTTTTGAAGGTTCATTAAACACGATTAGAACTGGTTGACTTTATTGGTGTAACAGACGTAAACCCACCGCGATTAGATATGGTTTTTTTTGGGCTTCCACCGCGATTAGATATGGTTTTTTTTGGGCTTTCACTGGTTTAATTTATGGGTGTAACAGACTTAACCAACCCCTAGCAGATATTGTTGTTTTTAGGCTTTTCTTTCGAATGCTTCCCCTCAAAATTTTAAAATATCCTTATAATAAATATTTTGTTTTACTCCCCAACAGATGTGAGATCTCAAAATCGACCCTCTTTGGGGGCTCGGTTATCTTTACTGTAACAGTCATAACCCACCGTTAGCTCATATTGTTCTCTTTGAGTTTTTCCTTCATGGGCTTTTAGTTTATGAGATCTCGGTTGTAGAGGGAAACGAAACACTCTTGACTGTAGAAACTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGTTAGAGCCTTGATTAAGGGGAGATGTACGGTGTTGGATGAAAGTGTCCCACATTGCTTAATTTAGGGAATGGTCATGGGTTTATAATCTAAGAATACACTCAGTATGAAGCCTTTTAGGGAAGCACAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCCATGTTGGGCTATGGGTTAAAGACTAAAATATCATACCATTGTGGAGAGTCCCTGTTGGGCTATGGGTTAAGACTACAATTTTTTATCAACGTTACATTTATTTATTTACTTATTTTTTTTAAAAAAAATAAATTTGGTGCAGGTTGGATTCAACAATGGAGTCCCAATCAATGAGGAATTCTTCATAGAAAACATAAGTGGAAGGCACAATGAGGACCTTTGTGGCATCCTCCTCCCAAATTGGGACTTACCCAAAGCTAGAAAATTCCTTCAAGATAAAGAAACTTACTTTTGCAGGTTCGGGTTCGGTTTTATTGTACTTATGTTCGTGTGTTTTCTAGAACATTCATATAACTAAAAGTTGCGTAACCCTACTCGTAATTCCTACACTACGACCTGAAAATCATTTTGAAAAAATGACGTGCACACTTTCGTGTCAGAGTTAGATATGCATATTGAATAGATATCAAGATTAGTTAACCAAAATTGATCGGAATTTTTAACTCATCTCCACCAGACTAGCAGAAGAGCAGTTGGAAGCCATAGAAGGGTTGGACAAGGTTTGCAAATGGATTGAGGAGCGCGGGATTAAACGCGCCGCCGTGACAAACGCCCCGAGGCCGAACGCCGAGCTGATTCTTTCGATGCTTAAACTTACAAATTTTTTTGAGGTGGTGATCATAGGGAATGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTAAAGGCTCTTCAAGCTCTCCAAGTCTCTCCACAACGTGCTTTTGTCTTTGAGGTTCGTTTTTCGGTCTAAGAATTATGATCGGTACTTTACGAATGATTTGTGAAGTTTAACTAAATGAAACCGGAGTTCAAAATTGTTAACTATAAAAACGAGATTGAAACTAAGTTCAAATCATTTTTTGAAGCGATAACGATGCATCGTATTGAAACTAAACTCGAACCGTTACTAATGTTTCGATCGAAACCCTTTTTATGTGGGAACAGGATTCGGTATCTGGAGTGAAAGCAGGAGTGGGAGCTGGAATGGAAGTGATAGGAATTGGGAGAAGAAACCCAGAAGAGTTGCTCAAAGAAGCTGGAGCT ATGCAATCTCTTCATCATCCGACCATCGTCCCTCGACGTTCTACTCCTCATCCCCACACCCACCGCACCCGCCACCATTTTTGCAGCCATTTCCCCTCCAGTCTTCCACATCTTCGCCGCCCTCCGCCAGCTCCGGCCGCGGTTGTCTCCCCAAGCAGCTCGTGGGAGAAGGGCCCTATTGAAGCTCTTCTGTTTGACATTGATGGAACACTTTGTGATTCTGATCCTCTCCACTTCTACGCCTTCCGCCAAATGCTTCAACAGGTTGGATTCAACAATGGAGTCCCAATCAATGAGGAATTCTTCATAGAAAACATAAGTGGAAGGCACAATGAGGACCTTTGTGGCATCCTCCTCCCAAATTGGGACTTACCCAAAGCTAGAAAATTCCTTCAAGATAAAGAAACTTACTTTTGCAGACTAGCAGAAGAGCAGTTGGAAGCCATAGAAGGGTTGGACAAGGTTTGCAAATGGATTGAGGAGCGCGGGATTAAACGCGCCGCCGTGACAAACGCCCCGAGGCCGAACGCCGAGCTGATTCTTTCGATGCTTAAACTTACAAATTTTTTTGAGGTGGTGATCATAGGGAATGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTAAAGGCTCTTCAAGCTCTCCAAGTCTCTCCACAACGTGCTTTTGTCTTTGAGGATTCGGTATCTGGAGTGAAAGCAGGAGTGGGAGCTGGAATGGAAGTGATAGGAATTGGGAGAAGAAACCCAGAAGAGTTGCTCAAAGAAGCTGGAGCT ATGCAATCTCTTCATCATCCGACCATCGTCCCTCGACGTTCTACTCCTCATCCCCACACCCACCGCACCCGCCACCATTTTTGCAGCCATTTCCCCTCCAGTCTTCCACATCTTCGCCGCCCTCCGCCAGCTCCGGCCGCGGTTGTCTCCCCAAGCAGCTCGTGGGAGAAGGGCCCTATTGAAGCTCTTCTGTTTGACATTGATGGAACACTTTGTGATTCTGATCCTCTCCACTTCTACGCCTTCCGCCAAATGCTTCAACAGGTTGGATTCAACAATGGAGTCCCAATCAATGAGGAATTCTTCATAGAAAACATAAGTGGAAGGCACAATGAGGACCTTTGTGGCATCCTCCTCCCAAATTGGGACTTACCCAAAGCTAGAAAATTCCTTCAAGATAAAGAAACTTACTTTTGCAGACTAGCAGAAGAGCAGTTGGAAGCCATAGAAGGGTTGGACAAGGTTTGCAAATGGATTGAGGAGCGCGGGATTAAACGCGCCGCCGTGACAAACGCCCCGAGGCCGAACGCCGAGCTGATTCTTTCGATGCTTAAACTTACAAATTTTTTTGAGGTGGTGATCATAGGGAATGAATGTGAACGTGCAAAGCCATTCCCTGATCCTTACTTAAAGGCTCTTCAAGCTCTCCAAGTCTCTCCACAACGTGCTTTTGTCTTTGAGGATTCGGTATCTGGAGTGAAAGCAGGAGTGGGAGCTGGAATGGAAGTGATAGGAATTGGGAGAAGAAACCCAGAAGAGTTGCTCAAAGAAGCTGGAGCT MQSLHHPTIVPRRSTPHPHTHRTRHHFCSHFPSSLPHLRRPPPAPAAVVSPSSSWEKGPIEALLFDIDGTLCDSDPLHFYAFRQMLQQVGFNNGVPINEEFFIENISGRHNEDLCGILLPNWDLPKARKFLQDKETYFCRLAEEQLEAIEGLDKVCKWIEERGIKRAAVTNAPRPNAELILSMLKLTNFFEVVIIGNECERAKPFPDPYLKALQALQVSPQRAFVFEDSVSGVKAGVGAGMEVIGIGRRNPEELLKEAGA
BLAST of Carg11072 vs. NCBI nr
Match: XP_022964402.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita moschata]) HSP 1 Score: 516.9 bits (1330), Expect = 3.9e-143 Identity = 251/260 (96.54%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of Carg11072 vs. NCBI nr
Match: XP_023514863.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita pepo subsp. pepo]) HSP 1 Score: 514.6 bits (1324), Expect = 1.9e-142 Identity = 250/263 (95.06%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of Carg11072 vs. NCBI nr
Match: XP_023000617.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita maxima]) HSP 1 Score: 488.4 bits (1256), Expect = 1.5e-134 Identity = 239/263 (90.87%), Postives = 243/263 (92.40%), Query Frame = 0
BLAST of Carg11072 vs. NCBI nr
Match: XP_008460065.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 5.9e-123 Identity = 224/268 (83.58%), Postives = 238/268 (88.81%), Query Frame = 0
BLAST of Carg11072 vs. NCBI nr
Match: XP_011656719.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 3.3e-118 Identity = 215/268 (80.22%), Postives = 230/268 (85.82%), Query Frame = 0
BLAST of Carg11072 vs. TAIR10
Match: AT2G38740.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 254.6 bits (649), Expect = 6.6e-68 Identity = 115/209 (55.02%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of Carg11072 vs. TAIR10
Match: AT1G56500.1 (haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 76.3 bits (186), Expect = 3.2e-14 Identity = 62/225 (27.56%), Postives = 108/225 (48.00%), Query Frame = 0
BLAST of Carg11072 vs. TAIR10
Match: AT4G21470.1 (riboflavin kinase/FMN hydrolase) HSP 1 Score: 68.6 bits (166), Expect = 6.7e-12 Identity = 53/188 (28.19%), Postives = 98/188 (52.13%), Query Frame = 0
BLAST of Carg11072 vs. TAIR10
Match: AT4G39970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08 Identity = 56/225 (24.89%), Postives = 94/225 (41.78%), Query Frame = 0
BLAST of Carg11072 vs. TAIR10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Carg11072 vs. Swiss-Prot
Match: sp|Q9ZVJ5|SGGP_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2) HSP 1 Score: 254.6 bits (649), Expect = 1.2e-66 Identity = 115/209 (55.02%), Postives = 161/209 (77.03%), Query Frame = 0
BLAST of Carg11072 vs. Swiss-Prot
Match: sp|Q9X0Y1|P1254_THEMA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) OX=243274 GN=TM_1254 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.5e-21 Identity = 65/208 (31.25%), Postives = 113/208 (54.33%), Query Frame = 0
BLAST of Carg11072 vs. Swiss-Prot
Match: sp|P44004|Y488_HAEIN (Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0488 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.3e-16 Identity = 50/193 (25.91%), Postives = 96/193 (49.74%), Query Frame = 0
BLAST of Carg11072 vs. Swiss-Prot
Match: sp|P95649|CBBY_RHOSH (Protein CbbY OS=Rhodobacter sphaeroides OX=1063 GN=cbbY PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.7e-15 Identity = 58/197 (29.44%), Postives = 91/197 (46.19%), Query Frame = 0
BLAST of Carg11072 vs. Swiss-Prot
Match: sp|Q3J8A0|GPH_NITOC (Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_2493 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.2e-15 Identity = 52/189 (27.51%), Postives = 89/189 (47.09%), Query Frame = 0
BLAST of Carg11072 vs. TrEMBL
Match: tr|A0A1S3CB79|A0A1S3CB79_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498987 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 3.9e-123 Identity = 224/268 (83.58%), Postives = 238/268 (88.81%), Query Frame = 0
BLAST of Carg11072 vs. TrEMBL
Match: tr|A0A1S3CBS4|A0A1S3CBS4_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498987 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-105 Identity = 196/235 (83.40%), Postives = 206/235 (87.66%), Query Frame = 0
BLAST of Carg11072 vs. TrEMBL
Match: tr|W9RTW5|W9RTW5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023895 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 6.5e-86 Identity = 146/201 (72.64%), Postives = 178/201 (88.56%), Query Frame = 0
BLAST of Carg11072 vs. TrEMBL
Match: tr|A0A1U8B1M7|A0A1U8B1M7_NELNU (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104609888 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 7.2e-85 Identity = 148/224 (66.07%), Postives = 185/224 (82.59%), Query Frame = 0
BLAST of Carg11072 vs. TrEMBL
Match: tr|A0A1U8B5B7|A0A1U8B5B7_NELNU (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104609888 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 9.4e-85 Identity = 148/225 (65.78%), Postives = 185/225 (82.22%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |