CsaV3_6G002420 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G002420
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	elongation factor 1-delta-like
Location	chr6 : 1666846 .. 1669449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACACTAGCCTATATGCGGCGCACCGGATCATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGGTCTGTCACTTTTTTGTTTCTTGTTTTTCTTTATTTACAATATGATGATGAATGATTAGACCGATGGTTATTTTCTTTAAATGCATTTACTCCTCTAACTACAGTGGTCTGTCACTCTGAATCAGAGGGTCCATTTCGAATCTTCAAGCGTTGTATTTCGCTTCAAAAGCTAAATTTATCCCAATTTTCTTCAACTTATTGGAATTTTAGTGCTAGCCCTTTTATTTTGGGCTCCATGAACAAGAAGTTTCCGATCTAATTCCCATGGGGTTGTCTAACGAGTTATTCTCGATTACGAACTGATAACTAGACATTTGAATTTTGGCACAGAGAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTTAGTGGAACATGTATTGGGCTTTGAATGTTATTGTGTGAATCTGGTTTTTGTTTGTTTGACAAATGATCTTCCTCAGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCGTAAGTCATCGCAATTCCAAATTCTCTCGGCTTGGTTTTATCGAATTTTTAATTATGAATTCATGCTATGGCATTGTTCACTATTTGTTCTGAAACCACTGGGCTTGATATTGGCTTTTAGCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGTGAAAAATTGCCTAATGTTTCTTTCTTTCTATATGTTATGTGTGGTGAGACGAGACATTGTCTATTAGTGGATGCTCTATTATATTGTTTGATTTCCTTTAATTTTTTCATCTTAATTATAGTTGGTGTACACTGAATTTTATCAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGAGTTTGATTTACAATCGATCTTGGACTTGTTTTATATTGTCAGTGATTTTAATGATGTCTTGTGCTTGTTCTCTTGGGTGTCTGTTTAGGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATGTAAGTTTTTATATCTCCGTGCTATCAATTTATAGGCATGATATTACTCTTGAGAAGGAATCTGCACTCCCTTTTTTGTTCTTGTGATCTCACTATAATTGAATGGGAATCTCTGTTTCTCTTCATTTCTCGAATTGGTTAACTGATTCAAGCTTGCATGATTTTATATGCTTATTTCTCCAGCACGCCAGTTTACATCCTATCTAAAGAAAGTAGAGTACTAAGCAGGCTCTACTTTACAAGGGTATGTTCTCATCCTTGTCATTGTTTTGCAGCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATGTAAGTGCAGTTTTAATTTTGTTGCACCTGCACACAAGCTAGATTGTGCTGTTCGATAAAAACACTCGTGAACCTGTTCTACTATCAATCTTCAATCCTTCATTTTCTTAATCAACTATGGTTTCTATTGGCAGAATTTTGAGCTTTTTCGTCAAACCCAAGAGCTGGTGGCTTCAAAGATGTTGAATTCGGGAAGATGTTTTATAGAAGCCTCTGTTTCTAATTTCTACTTCATACTTGTTTTGACAATGCTTGAAATACTTTTCTTTACAGCTTTAATTGCTGTCTAGTTCCTCTCAGTTTTGTTAAATTGATTTGAAATGAGCTTATAAAAAATAATATTAGGATAATTATCATGTTTCATTCCAGTATACTGAATTTTAAATTGATGACAGCTTTTGGTATATATCTTGATTTCGATTCATGGAGTTCTTGAAGATTGAAAGCTTAGAAGAAGGATACAATCAACATTTTAGTAATATGAGAAAGGATAGATGGTGTAACATTAATAGCGTAATACGCACATAAACACATTAAAACTGGAACTATATGTTTTGTGGAATATGGATGGAAGGTATAACAAAATATTGGAGTATGAGCACAGCATTTCTTGTCTGAGCTCATTAGCCAGTAGCATCATGGATACATGTGAAATGTAGAGGAAGCCATGTTCAATAACACTTGCCACCAGGAAGTGTCTATTCTGTCGACAAATATTTGATAATTGCAACG

mRNA sequence

ATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGAGAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATAA

Coding sequence (CDS)

ATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGAGAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATAA

Protein sequence

MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI

Homology

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BLAST of CsaV3_6G002420 vs. NCBI nr
Match: KGN45846.1 (hypothetical protein Csa_6G014660 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD 60
           MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD
Sbjct: 1   MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD 60

Query: 61  EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK 120
           EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK
Sbjct: 61  EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK 120

Query: 121 LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 180
           LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL
Sbjct: 121 LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 180

Query: 181 MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL 240
           MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL
Sbjct: 181 MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL 240

Query: 241 IEEYLTVEPINEHVQSCDIVAFNKI 266
           IEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 241 IEEYLTVEPINEHVQSCDIVAFNKI 265

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BLAST of CsaV3_6G002420 vs. NCBI nr
Match: XP_004138389.1 (PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 2.3e-82
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 222
           XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 223 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 223

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BLAST of CsaV3_6G002420 vs. NCBI nr
Match: XP_008456796.1 (PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo] >XP_008456797.1 PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 7.0e-79
Identity = 207/223 (92.83%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEALLRVSAVFGEGSGVKLDAVAT            XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVAT----PPAADAKVXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 222
           XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 223 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

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BLAST of CsaV3_6G002420 vs. NCBI nr
Match: XP_008456798.1 (PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 7.0e-79
Identity = 207/223 (92.83%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEALLRVSAVFGEGSGVKLDAVAT            XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVAT----PPAADAKVXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 222
           XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 223 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

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BLAST of CsaV3_6G002420 vs. NCBI nr
Match: XP_022954479.1 (elongation factor 1-delta-like isoform X1 [Cucurbita moschata] >XP_022954480.1 elongation factor 1-delta-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 209/234 (89.32%), Postives = 217/234 (92.74%), Query Frame = 0


Query: 33  PSREKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSE 92
           P+ EKSH+FEMAVA  DVKSA+GLKKLDEYLLSRSYISGYQPSKDDVTVYE+LSKPVSSE
Sbjct: 39  PAGEKSHYFEMAVALHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYESLSKPVSSE 98

Query: 93  YVNVSRWSNHIEALLRVSAVFGEGSGVKLD-AVATXXXXXXXXXXXXXXXXXXXXXXXXX 152
           Y+NV+RWSNHIEALLRVSAVFGEGSGVK + A A         XXXXXXXXXXXXXXXXX
Sbjct: 99  YLNVARWSNHIEALLRVSAVFGEGSGVKFESAEAIATPPGADAXXXXXXXXXXXXXXXXX 158

Query: 153 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGA 212
           XXXXXXXXXXXXXXXXXXXXXXXXXX VLMDIKPWDDETDMKKLEEAVRSV+MEGLLWGA
Sbjct: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXSVLMDIKPWDDETDMKKLEEAVRSVEMEGLLWGA 218

Query: 213 SKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           SKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEE LTVEPINEHVQSCDIVAFNKI
Sbjct: 219 SKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEERLTVEPINEHVQSCDIVAFNKI 272

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BLAST of CsaV3_6G002420 vs. TAIR10
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-63
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 46  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 105
           AFP++ S SGLKKLDE+LL+RSYI+GYQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 106 LLRVSAVFGEGSGVKLDA---------VATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165
           LLR+S V  EGSGV ++             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 166 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 225
           XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 226 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of CsaV3_6G002420 vs. TAIR10
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-62
Identity = 180/229 (78.60%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 46  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 105
           AFP++ S +GLKKLDE+LL+RSYI+GYQ SKDD+TV+ AL+KP +S+YVN SRW NHI+A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 106 LLRVSAVFGEGSGVKLDAVA---------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165
           LLR+S V  EGSGV ++  A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 166 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 225
           XXXXXXXXXXXXXXXXXXXXXXVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 226 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of CsaV3_6G002420 vs. TAIR10
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 144/228 (63.16%), Postives = 166/228 (72.81%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV F D+ +  GLK L+E+L  ++YISG Q S DDV VY A+ +     + N S+W + 
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 103 IEALLRVSAV-----FGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           + + L  S          G GV   + A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VASHLAKSFPGKADGVRVGGGVAPPSEAHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPV 222
           XXXXXXXXX            VL+++KPWDDETDMKKLEEAVRSVQM GL WGASKLVPV
Sbjct: 121 XXXXXXXXXDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPV 180

Query: 223 GYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           GYGIKKL IM+TIVDDLVSVDNLIE++LT EP NE++QS DIVAFNKI
Sbjct: 181 GYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228

[Close]

BLAST of CsaV3_6G002420 vs. TAIR10
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-43
Identity = 150/225 (66.67%), Postives = 171/225 (76.00%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV F D+ +  G+K ++E+L  ++YISG Q S DDV VY A+    S  + N S+W   
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 103 IEALLRVSAVFGEGSGVKL--DAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           + + L  S   G+  GV+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VASQLAKSFP-GKAVGVQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYG 222
           XXXXXXXXXXXXX     VLMD+KPWDDETDMKKLEEAVR V+M GL WGASKLVPVGYG
Sbjct: 121 XXXXXXXXXXXXXSGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYG 180

Query: 223 IKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           IKKL IM TIVDDLVS DNLIE++LT EP NE++QSCDIVAFNKI
Sbjct: 181 IKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224

[Close]

BLAST of CsaV3_6G002420 vs. Swiss-Prot
Match: sp|Q9SI20|EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.4e-62
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 46  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 105
           AFP++ S SGLKKLDE+LL+RSYI+GYQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 106 LLRVSAVFGEGSGVKLDA---------VATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165
           LLR+S V  EGSGV ++             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 166 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 225
           XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 226 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of CsaV3_6G002420 vs. Swiss-Prot
Match: sp|P93447|EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3)

HSP 1 Score: 239.2 bits (609), Expect = 5.3e-62
Identity = 180/226 (79.65%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV F D+ S +GL+KLDEYLLSRSYISGYQ SKDD+ V+ AL+KP SS+YVNVSRW NH
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 103 IEALLRVSAVFGEGSGVKLD--AVAT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           +EALLR+S V  EG GV ++  +VAT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VEALLRISGVSAEGCGVTVEGSSVATPPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222
           XXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGY 180

Query: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           GIKKLQIMLTIVDDLVSVD+L+E+YLT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226

[Close]

BLAST of CsaV3_6G002420 vs. Swiss-Prot
Match: sp|P48006|EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 5.8e-61
Identity = 180/229 (78.60%), Postives = 202/229 (88.21%), Query Frame = 0


Query: 46  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 105
           AFP++ S +GLKKLDE+LL+RSYI+GYQ SKDD+TV+ AL+KP +S+YVN SRW NHI+A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 106 LLRVSAVFGEGSGVKLDAVA---------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 165
           LLR+S V  EGSGV ++  A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 166 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 225
           XXXXXXXXXXXXXXXXXXXXXXVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 226 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of CsaV3_6G002420 vs. Swiss-Prot
Match: sp|O81918|EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3)

HSP 1 Score: 229.2 bits (583), Expect = 5.5e-59
Identity = 181/231 (78.35%), Postives = 197/231 (85.28%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV F D+ S +GL  LD YLLSRSYI+GYQ SKDD+TV+ A+ K   + YVNVSRW  H
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 103 IEALLRVSAVFGEGSGVKLD--------AVATXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           I+ALLR+S V GEGSGV ++        A   XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 222
           XXXXXXXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 223 VPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VPVGYGIKKL IM+TIVDDLVSVDNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of CsaV3_6G002420 vs. Swiss-Prot
Match: sp|Q40680|EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58
Identity = 168/229 (73.36%), Postives = 189/229 (82.53%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV+F +V S +GLKKLDEYLL+RSYISGYQ S DD+ VY A S   SS Y NV+RW  H
Sbjct: 1   MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVAT------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           I+ALLR+S V  +G GVK+++ A               XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 222
           XXXXXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDM KLEEAVR+V+MEGLLWGASKLVP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 223 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           VGYGIKKLQIM+TIVDDLVSVD+LIE+Y   EP NE++QSCDIVAFNKI
Sbjct: 181 VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229

[Close]

BLAST of CsaV3_6G002420 vs. TrEMBL
Match: tr|A0A0A0KDI4|A0A0A0KDI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 8.0e-108
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD 60
           MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD
Sbjct: 1   MPFSLFICQSRAQNPNKYQTSPLTARSGTSKTPSREKSHHFEMAVAFPDVKSASGLKKLD 60

Query: 61  EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK 120
           EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK
Sbjct: 61  EYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVK 120

Query: 121 LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 180
           LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL
Sbjct: 121 LDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 180

Query: 181 MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL 240
           MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL
Sbjct: 181 MDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNL 240

Query: 241 IEEYLTVEPINEHVQSCDIVAFNKI 266
           IEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 241 IEEYLTVEPINEHVQSCDIVAFNKI 265

[Close]

BLAST of CsaV3_6G002420 vs. TrEMBL
Match: tr|A0A1S3C5C6|A0A1S3C5C6_CUCME (elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.6e-79
Identity = 207/223 (92.83%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEALLRVSAVFGEGSGVKLDAVAT            XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVAT----PPAADAKVXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 222
           XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 223 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of CsaV3_6G002420 vs. TrEMBL
Match: tr|A0A1S3C464|A0A1S3C464_CUCME (elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.6e-79
Identity = 207/223 (92.83%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 103 IEALLRVSAVFGEGSGVKLDAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEALLRVSAVFGEGSGVKLDAVAT            XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVAT----PPAADAKVXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 222
           XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 XXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 223 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

[Close]

BLAST of CsaV3_6G002420 vs. TrEMBL
Match: tr|A0A0A0LRI8|A0A0A0LRI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050420 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 209/226 (92.48%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV+F DVKSA+GL+KLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 103 IEALLRVSAVFGEGSGVKL--DAVAT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           I AL+R SA FGEGSGVK   DA+AT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]

BLAST of CsaV3_6G002420 vs. TrEMBL
Match: tr|A0A1S3AZ96|A0A1S3AZ96_CUCME (elongation factor 1-delta-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484370 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 207/226 (91.59%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102
           MAV+  DVKSA+GLKKLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWFNH 60

Query: 103 IEALLRVSAVFGEGSGVKLD--AVAT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           IEAL+R SA FGEGSGVK D  A+AT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALVRASASFGEGSGVKFDSEAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 163 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVR V MEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRGVHMEGLLWGASKLVPVGY 180

Query: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 266
           GIKKLQIMLTIVDDLVSVDNLIEE+LTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 226

The following BLAST results are available for this feature:

BLAST of CsaV3_6G002420 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45846.1	1.2e-107	100.00	hypothetical protein Csa_6G014660 [Cucumis sativus]	[more]
XP_004138389.1	2.3e-82	100.00	PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus]	[more]
XP_008456796.1	7.0e-79	92.83	PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo] >XP_008456...	[more]
XP_008456798.1	7.0e-79	92.83	PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo]	[more]
XP_022954479.1	1.2e-78	89.32	elongation factor 1-delta-like isoform X1 [Cucurbita moschata] >XP_022954480.1 e...	[more]

BLAST of CsaV3_6G002420 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18110.1	1.3e-63	80.35	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]
AT1G30230.2	3.2e-62	78.60	Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r...	[more]
AT5G12110.1	1.5e-43	63.16	Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r...	[more]
AT5G19510.1	2.0e-43	66.67	Translation elongation factor EF1B/ribosomal protein S6 family protein	[more]

BLAST of CsaV3_6G002420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SI20\|EF1D2_ARATH	2.4e-62	80.35	Elongation factor 1-delta 2 OS=Arabidopsis thaliana OX=3702 GN=At2g18110 PE=1 SV...	[more]
sp\|P93447\|EF1D_PIMBR	5.3e-62	79.65	Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3	[more]
sp\|P48006\|EF1D1_ARATH	5.8e-61	78.60	Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV...	[more]
sp\|O81918\|EF1D_BETVU	5.5e-59	78.35	Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3	[more]
sp\|Q40680\|EF1D1_ORYSJ	1.6e-58	73.36	Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g061...	[more]

BLAST of CsaV3_6G002420 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDI4\|A0A0A0KDI4_CUCSA	8.0e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1	[more]
tr\|A0A1S3C5C6\|A0A1S3C5C6_CUCME	4.6e-79	92.83	elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A1S3C464\|A0A1S3C464_CUCME	4.6e-79	92.83	elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A0A0LRI8\|A0A0A0LRI8_CUCSA	1.9e-72	92.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050420 PE=3 SV=1	[more]
tr\|A0A1S3AZ96\|A0A1S3AZ96_CUCME	2.7e-71	91.59	elongation factor 1-delta-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348437...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005853	eukaryotic translation elongation factor 1 complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006414	translational elongation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003746	translation elongation factor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036219	eEF-1beta-like_sf
IPR036282	Glutathione-S-Trfase_C_sf
IPR001326	Transl_elong_EF1B_B/D_CS
IPR014717	Transl_elong_EF1B/ribosomal_S6
IPR014038	EF1B_bsu/dsu_GNE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003746	translation elongation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G002420.1	CsaV3_6G002420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 148..168
None	No IPR available	GENE3D	G3DSA:1.20.1050.130		coord: 32..118 e-value: 1.3E-8 score: 36.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..155
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 43..265
None	No IPR available	PANTHER	PTHR11595:SF27	SUBFAMILY NOT NAMED	coord: 43..265
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 176..265 e-value: 7.4E-37 score: 138.4
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 178..265 e-value: 1.4E-33 score: 114.8
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	CDD	cd00292	EF1B	coord: 174..265 e-value: 1.27081E-39 score: 133.491
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	G3DSA:3.30.70.60		coord: 169..265 e-value: 1.2E-43 score: 149.0
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00824	EF1BD_1	coord: 140..148
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00825	EF1BD_2	coord: 254..265
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	SSF47616	GST C-terminal domain-like	coord: 50..111
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	SSF54984	eEF-1beta-like	coord: 173..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G002420	CSPI06G02260	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G002420	Cucsa.325890	Cucumber (Gy14) v1	cgycucB506
CsaV3_6G002420	CsGy6G002300	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G002420	MELO3C020023	Melon (DHL92) v3.5.1	cucmeB487
CsaV3_6G002420	ClCG11G005580	Watermelon (Charleston Gray)	cucwcgB452
CsaV3_6G002420	Lsi03G002540	Bottle gourd (USVL1VR-Ls)	cuclsiB473
CsaV3_6G002420	MELO3C020023.2	Melon (DHL92) v3.6.1	cucmedB473
CsaV3_6G002420	Cla97C11G212520	Watermelon (97103) v2	cucwmbB441
CsaV3_6G002420	Bhi04G001822	Wax gourd	cucwgoB597

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G002420	Silver-seed gourd	carcucB0300
CsaV3_6G002420	Cucurbita maxima (Rimu)	cmacucB0363
CsaV3_6G002420	Cucurbita moschata (Rifu)	cmocucB0358
CsaV3_6G002420	Cucurbita pepo (Zucchini)	cpecucB0238
CsaV3_6G002420	Watermelon (97103) v1	cucwmB559