CSPI06G02260 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G02260
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionElongation factor 1-beta, putative
LocationChr6 : 1678097 .. 1680010 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCGCACCGGATCATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGGTCTGTCACTTTTTTGTTTCTTGTTTTTCTTTATTTACAATATGATGACGAATGATTAGACCGATTGTTATTTTCTTTAAATGCATTTACTCCTCTAACTACAGTGGTCTGTCACTCTGAATCAGAGGGTCCATTTCGAATCTTCAACCGTTGTATTTCGCTTCAAAAGCTAAATTTATCCCAATTTTCTTCAACTTATTGGAATTTTAGTGCTAGCCCTTTTATTTTGGGCTCCATGAACAAGAAGTTTCCGATCTAATTCCCATGGGGTTGTCTAACGAGTTATTCTCGATTACGAACTGATAACTAGACATTTGAATTTTGGCACAGAGAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTTAGTGGAACATGTATTGGGCTTTGAATGTTATTGTGTGAATCTGGTTTTTGTTTGTTTGACAAATGATCTTCCTCAGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAATGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCGTAAGTCATCGCAATTCCAAATTCTCGGCTTGGTTTTATCGAATTTTTAATTATGAATTCATGCTATGGCATTGTTCACTATTTGTTCTGAAACCACTGGGCTTGATATTGGCTTTTAGCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGTGAAAAATTGCCTAATGTTTCTTTCTTTCTATATGTTATGTGTGGTGAGACGAGACATTGTCTATTGGTGGATGCTCTATTATATTGTTTGATTTCCTTTAATTTTTTCATCTTAATTATAGTTGGTGTACACTGAATTTTATCAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGAGTTTGATTTACAATCGATCTTGGACTTGTTTTATATTGTCAGTGATTTTAATGATGTCTTGTGCTTGTTCTCTTGGGTGTCTGTTTAGGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATGTATGTTTTTATATCTCCGTGCTATCAATTTATAGGCATGATATTACTCTTGAGAAGGAATCTGCACTCCCTTTTTTGTTCTTGTGATCTCACTATAATTGAATGGGAATCTCTGTTTCTCTTCATTTCTCGAATTGGTTAACTGATTCAAGCTTGCATGATTTTATATGCTTATTTCTCCAGCACGCCAGTTTACATCCTATCTAAAGAAAGTAGAGTACTAAGCAGGCTCTACTTTACAAGGGTATGTTCTCATCCTTGTCATTGTTTTGCAGCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATGTAAGTGCAGTTTTAATTTTGTTGCACCTGCACACAAGCTAGATTATGCTGTTCGATAA

mRNA sequence

ATGCGGCGCACCGGATCATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGTGGTCTGTCACTCTGAATCAGAGGGTCCATTTCGAATCTTCAACCGTTAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAATGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATGTAAGTGCAGTTTTAATTTTGTTGCACCTGCACACAAGCTAGATTATGCTGTTCGATAA

Coding sequence (CDS)

ATGCGGCGCACCGGATCATGCCCTTCTCCCTCTTTATATGTCAAAGCAGAGCCCAAAACCCTAACAAATATCAAACCTCCCCTCTTACTGCACGCTCCGGCACCTCCAAAACTCCATCTCGAGTGGTCTGTCACTCTGAATCAGAGGGTCCATTTCGAATCTTCAACCGTTAAGTCGCATCACTTTGAAATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAATGTGTCTAGGTGGTCCAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGCTGCCGATGATGATGATGATGATGACGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAATATTTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATGTAAGTGCAGTTTTAATTTTGTTGCACCTGCACACAAGCTAGATTATGCTGTTCGATAA
Homology
[Close]
BLAST of CSPI06G02260 vs. Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.0e-90
Identity = 179/229 (78.17%), Postives = 202/229 (88.21%), Query Frame = 1 

Query: 67  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 126
           AFP++ S SGLKKLDE+LL+RSYI+GYQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 127 LLRVSAVFGEGSGVKLD--------AVATPPAADAK-AADDDDDDDDMDLFGEETEEEKK 186
           LLR+S V  EGSGV ++        AVATPPAAD+K  A +++DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122

Query: 187 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 246
           AAEERAA+VKAS KKKESGKSSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 247 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI06G02260 vs. Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3)

HSP 1 Score: 330.9 bits (847), Expect = 1.5e-89
Identity = 176/226 (77.88%), Postives = 201/226 (88.94%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV F D+ S +GL+KLDEYLLSRSYISGYQ SKDD+ V+ AL+KP SS+YVNVSRW NH
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 124 IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 183
           +EALLR+S V  EG GV ++  +VATPP AD KA A +DDDDDD+DLFGEETEEEKKA+E
Sbjct: 61  VEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASE 120

Query: 184 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 243
           ERAAAVKAS KKKESGKSSVL+D+KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGY
Sbjct: 121 ERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGY 180

Query: 244 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           GIKKLQIMLTIVDDLVSVD+L+E+YLT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226

[Close]
BLAST of CSPI06G02260 vs. Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 3.4e-89
Identity = 176/229 (76.86%), Postives = 203/229 (88.65%), Query Frame = 1 

Query: 67  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 126
           AFP++ S +GLKKLDE+LL+RSYI+GYQ SKDD+TV+ AL+KP +S+YVN SRW NHI+A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 127 LLRVSAVFGEGSGVKLD--------AVATPPAADAK-AADDDDDDDDMDLFGEETEEEKK 186
           LLR+S V  EGSGV ++        AVATPPAAD+K AA D++DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKK 122

Query: 187 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 246
           AAEERAA+VKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 247 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI06G02260 vs. Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 318.2 bits (814), Expect = 1.0e-85
Identity = 172/229 (75.11%), Postives = 194/229 (84.72%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV+F +V S +GLKKLDEYLL+RSYISGYQ S DD+ VY A S   SS Y NV+RW  H
Sbjct: 1   MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH 60

Query: 124 IEALLRVSAVFGEGSGVKLDAVA-----TPPAADAKA-ADDDDDDDDMDLFGEETEEEKK 183
           I+ALLR+S V  +G GVK+++ A     TP  ADAKA A DDDDDDD+DLFGEETEEEKK
Sbjct: 61  IDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKK 120

Query: 184 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 243
           AAEERAAAVKAS KKKESGKSSVL+D+KPWDDETDM KLEEAVR+V+MEGLLWGASKLVP
Sbjct: 121 AAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 244 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VGYGIKKLQIM+TIVDDLVSVD+LIE+Y   EP NE++QSCDIVAFNKI
Sbjct: 181 VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229

[Close]
BLAST of CSPI06G02260 vs. Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3)

HSP 1 Score: 317.4 bits (812), Expect = 1.7e-85
Identity = 177/231 (76.62%), Postives = 195/231 (84.42%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV F D+ S +GL  LD YLLSRSYI+GYQ SKDD+TV+ A+ K   + YVNVSRW  H
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 124 IEALLRVSAVFGEGSGVKLDA------VATPPAADAKA-ADDDDDDDDMDLFGEETEEEK 183
           I+ALLR+S V GEGSGV ++       VATPPAAD+KA A DDDDDDD+DLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 184 KAAEERAAAVKAS-AKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 243
           KAAEERAAA  A  AKKKESGKSSVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 244 VPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VPVGYGIKKL IM+TIVDDLVSVDNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI06G02260 vs. TrEMBL
Match: A0A0A0KDI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 6.7e-129
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 1 

Query: 55  STVKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY 114
           S  KSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY
Sbjct: 34  SREKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY 93

Query: 115 VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE 174
           VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE
Sbjct: 94  VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE 153

Query: 175 EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK 234
           EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK
Sbjct: 154 EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK 213

Query: 235 LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV 294
           LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV
Sbjct: 214 LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV 273

Query: 295 APAHKLDYA 304
           APAHKLD A
Sbjct: 274 APAHKLDCA 282

[Close]
BLAST of CSPI06G02260 vs. TrEMBL
Match: A0A0A0LRI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050420 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.2e-103
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV+F DVKSA+GL+KLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 124 IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 183
           I AL+R SA FGEGSGVK D  A+ATPPAADAKA ADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120

Query: 184 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 243
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 244 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CSPI06G02260 vs. TrEMBL
Match: A0A0D2RIZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 7.8e-93
Identity = 191/236 (80.93%), Postives = 207/236 (87.71%), Query Frame = 1 

Query: 63  EMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSN 122
           EMAV F D+ SA+GLKKLDEYLL+RSYISGYQ SKDD+TVY ALS   SS YVNVSRW  
Sbjct: 48  EMAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYK 107

Query: 123 HIEALLRVSAVFGEGSGVKLD------AVATPPAADAKAAD-DDDDDDDMDLFGEETEEE 182
           HI+ALLR+S V  EG GV ++      AVATPP AD+KAA  +DDDDDD+DLFGEETEEE
Sbjct: 108 HIDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKAAAAEDDDDDDVDLFGEETEEE 167

Query: 183 KKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 242
           KKAAEERAAAVKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL
Sbjct: 168 KKAAEERAAAVKASGKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 227

Query: 243 VPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSF 292
           VPVGYGIKKLQIM+TIVDDLVSVD LIEE+LTVEPINE+VQSCDIVAFNKICK  +
Sbjct: 228 VPVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKICKICY 283

[Close]
BLAST of CSPI06G02260 vs. TrEMBL
Match: V4TIY6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021530mg PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 187/226 (82.74%), Postives = 203/226 (89.82%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAVAF +V SA+GLKKLDEYLL+RSYI+GYQ SKDD+TVY ALSK  SSEYVNVSRW  H
Sbjct: 57  MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKH 116

Query: 124 IEALLRVSAVFGEGSGVKLDA---VATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAE 183
           I+ALLR+S V GEGSGV ++    VATPP AD+KAA  DDDDDD+DLFGEETEEEKKAAE
Sbjct: 117 IDALLRISGVTGEGSGVTVEGSAPVATPPVADSKAAAPDDDDDDVDLFGEETEEEKKAAE 176

Query: 184 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 243
            RAA+VKASAKKKESGKSSVL+D+KPWDDETDMKKLEEAVRSVQMEGLLWGASKL PVGY
Sbjct: 177 ARAASVKASAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGY 236

Query: 244 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           GIKKLQIMLTIVDDLVSVD LIEE+L  EPINE+VQSCDIVAFNKI
Sbjct: 237 GIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 282

[Close]
BLAST of CSPI06G02260 vs. TrEMBL
Match: V4SZQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021530mg PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 196/263 (74.52%), Postives = 213/263 (80.99%), Query Frame = 1 

Query: 27  PLLLHAPAPPKLHLEWSVTLNQRVHFESSTVKSHHFEMAVAFPDVKSASGLKKLDEYLLS 86
           PL L A  P  L L  +VT                  MAVAF +V SA+GLKKLDEYLL+
Sbjct: 39  PLSLRANLPIALSLSVTVTA-----------------MAVAFDNVNSATGLKKLDEYLLT 98

Query: 87  RSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDA-- 146
           RSYI+GYQ SKDD+TVY ALSK  SSEYVNVSRW  HI+ALLR+S V GEGSGV ++   
Sbjct: 99  RSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRISGVTGEGSGVTVEGSA 158

Query: 147 -VATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMD 206
            VATPP AD+KAA  DDDDDD+DLFGEETEEEKKAAE RAA+VKASAKKKESGKSSVL+D
Sbjct: 159 PVATPPVADSKAAAPDDDDDDVDLFGEETEEEKKAAEARAASVKASAKKKESGKSSVLLD 218

Query: 207 IKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIE 266
           +KPWDDETDMKKLEEAVRSVQMEGLLWGASKL PVGYGIKKLQIMLTIVDDLVSVD LIE
Sbjct: 219 VKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIE 278

Query: 267 EYLTVEPINEHVQSCDIVAFNKI 287
           E+L  EPINE+VQSCDIVAFNKI
Sbjct: 279 EHLLEEPINEYVQSCDIVAFNKI 284

[Close]
BLAST of CSPI06G02260 vs. TAIR10
Match: AT1G30230.2 (AT1G30230.2 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 335.1 bits (858), Expect = 4.5e-92
Identity = 178/231 (77.06%), Postives = 205/231 (88.74%), Query Frame = 1 

Query: 67  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 126
           AFP++ S +GLKKLDE+LL+RSYI+GYQ SKDD+TV+ AL+KP +S+YVN SRW NHI+A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 127 LLRVSAVFGEGSGVKLD--------AVATPPAADAK-AADDDDDDDDMDLFGEETEEEKK 186
           LLR+S V  EGSGV ++        AVATPPAAD+K AA D++DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKK 122

Query: 187 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 246
           AAEERAA+VKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 247 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICK 289
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKICK
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKICK 233

[Close]
BLAST of CSPI06G02260 vs. TAIR10
Match: AT2G18110.1 (AT2G18110.1 Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 332.8 bits (852), Expect = 2.2e-91
Identity = 179/229 (78.17%), Postives = 202/229 (88.21%), Query Frame = 1 

Query: 67  AFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEA 126
           AFP++ S SGLKKLDE+LL+RSYI+GYQ SKDD+TV+ ALSKP +SE+VNVSRW NHI+A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 127 LLRVSAVFGEGSGVKLD--------AVATPPAADAK-AADDDDDDDDMDLFGEETEEEKK 186
           LLR+S V  EGSGV ++        AVATPPAAD+K  A +++DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122

Query: 187 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 246
           AAEERAA+VKAS KKKESGKSSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 247 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI06G02260 vs. TAIR10
Match: AT5G19510.1 (AT5G19510.1 Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-65
Identity = 142/225 (63.11%), Postives = 168/225 (74.67%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV F D+ +  G+K ++E+L  ++YISG Q S DDV VY A+    S  + N S+W   
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 124 IEALLRVSAVFGEGSGVKLD-AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAEE 183
           + + L  S   G+  GV+   + A  PA +A+A A   DDDDDMDLFG+ETEEEKKAAEE
Sbjct: 61  VASQLAKSFP-GKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEE 120

Query: 184 RAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYG 243
           R AA K + K KESGKSSVLMD+KPWDDETDMKKLEEAVR V+M GL WGASKLVPVGYG
Sbjct: 121 REAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYG 180

Query: 244 IKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           IKKL IM TIVDDLVS DNLIE++LT EP NE++QSCDIVAFNKI
Sbjct: 181 IKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224

[Close]
BLAST of CSPI06G02260 vs. TAIR10
Match: AT5G12110.1 (AT5G12110.1 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 242.3 bits (617), Expect = 4.0e-64
Identity = 140/229 (61.14%), Postives = 170/229 (74.24%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV F D+ +  GLK L+E+L  ++YISG Q S DDV VY A+ +     + N S+W + 
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 124 IEALLRVSAVFGEGSGVKLDAVATPPA-----ADAKAADDD-DDDDDMDLFGEETEEEKK 183
           + + L  S   G+  GV++     PP+      +  AAD D DDDDD+DLF +ETE+EKK
Sbjct: 61  VASHLAKSFP-GKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKK 120

Query: 184 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 243
           AAEER AA K + K KESGKSSVL+++KPWDDETDMKKLEEAVRSVQM GL WGASKLVP
Sbjct: 121 AAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVP 180

Query: 244 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           VGYGIKKL IM+TIVDDLVSVDNLIE++LT EP NE++QS DIVAFNKI
Sbjct: 181 VGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228

[Close]
BLAST of CSPI06G02260 vs. NCBI nr
Match: gi|700190642|gb|KGN45846.1| (hypothetical protein Csa_6G014660 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 9.7e-129
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 1 

Query: 55  STVKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY 114
           S  KSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY
Sbjct: 34  SREKSHHFEMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEY 93

Query: 115 VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE 174
           VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE
Sbjct: 94  VNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEE 153

Query: 175 EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK 234
           EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK
Sbjct: 154 EKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASK 213

Query: 235 LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV 294
           LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV
Sbjct: 214 LVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKICKCSFNFV 273

Query: 295 APAHKLDYA 304
           APAHKLD A
Sbjct: 274 APAHKLDCA 282

[Close]
BLAST of CSPI06G02260 vs. NCBI nr
Match: gi|449441238|ref|XP_004138389.1| (PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 8.8e-114
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 60

Query: 124 IEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERA 183
           IEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERA
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERA 120

Query: 184 AAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 243
           AAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 AAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 244 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 223

[Close]
BLAST of CSPI06G02260 vs. NCBI nr
Match: gi|659113881|ref|XP_008456796.1| (PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 398.3 bits (1022), Expect = 1.2e-107
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 124 IEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERA 183
           IEALLRVSAVFGEGSGVKLDAVATPPAADAK ADDDD    MDLFGEETEEEKKAAEERA
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVATPPAADAKVADDDD----MDLFGEETEEEKKAAEERA 120

Query: 184 AAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 243
           A++KAS+KKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 ASIKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 244 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKIC 288
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKIC
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKIC 220

[Close]
BLAST of CSPI06G02260 vs. NCBI nr
Match: gi|659113885|ref|XP_008456798.1| (PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 395.2 bits (1014), Expect = 1.0e-106
Identity = 211/223 (94.62%), Postives = 216/223 (96.86%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAVAFPDVKSASGLK+LDEYLLSRSYISGYQPSKDDVTVYEALSKPV SEYVNVSRWSNH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 124 IEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDMDLFGEETEEEKKAAEERA 183
           IEALLRVSAVFGEGSGVKLDAVATPPAADAK ADDDD    MDLFGEETEEEKKAAEERA
Sbjct: 61  IEALLRVSAVFGEGSGVKLDAVATPPAADAKVADDDD----MDLFGEETEEEKKAAEERA 120

Query: 184 AAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 243
           A++KAS+KKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK
Sbjct: 121 ASIKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIK 180

Query: 244 KLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           KLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 KLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of CSPI06G02260 vs. NCBI nr
Match: gi|778658084|ref|XP_011652056.1| (PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 3.1e-103
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 64  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 123
           MAV+F DVKSA+GL+KLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 124 IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 183
           I AL+R SA FGEGSGVK D  A+ATPPAADAKA ADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120

Query: 184 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 243
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 244 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 287
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

The following BLAST results are available for this feature:
BLAST of CSPI06G02260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF1D2_ARATH4.0e-9078.17Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1[more]
EF1D_PIMBR1.5e-8977.88Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3[more]
EF1D1_ARATH3.4e-8976.86Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2[more]
EF1D1_ORYSJ1.0e-8575.11Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2... [more]
EF1D_BETVU1.7e-8576.62Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3[more]
BLAST of CSPI06G02260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDI4_CUCSA6.7e-12998.80Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014660 PE=3 SV=1[more]
A0A0A0LRI8_CUCSA2.2e-10392.04Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050420 PE=3 SV=1[more]
A0A0D2RIZ3_GOSRA7.8e-9380.93Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1[more]
V4TIY6_9ROSI2.3e-9282.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021530mg PE=3 SV=1[more]
V4SZQ0_9ROSI2.3e-9274.52Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021530mg PE=3 SV=1[more]
BLAST of CSPI06G02260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30230.24.5e-9277.06 Glutathione S-transferase, C-terminal-like;Translation elongation f... [more]
AT2G18110.12.2e-9178.17 Translation elongation factor EF1B/ribosomal protein S6 family prot... [more]
AT5G19510.12.7e-6563.11 Translation elongation factor EF1B/ribosomal protein S6 family prot... [more]
AT5G12110.14.0e-6461.14 Glutathione S-transferase, C-terminal-like;Translation elongation f... [more]
BLAST of CSPI06G02260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190642|gb|KGN45846.1|9.7e-12998.80hypothetical protein Csa_6G014660 [Cucumis sativus][more]
gi|449441238|ref|XP_004138389.1|8.8e-114100.00PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus][more]
gi|659113881|ref|XP_008456796.1|1.2e-10794.64PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo][more]
gi|659113885|ref|XP_008456798.1|1.0e-10694.62PREDICTED: elongation factor 1-delta 2-like isoform X2 [Cucumis melo][more]
gi|778658084|ref|XP_011652056.1|3.1e-10392.04PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001326Transl_elong_EF1B_B/D_CS
IPR010987Glutathione-S-Trfase_C-like
IPR014038EF1B_bsu/dsu_GNE
IPR014717Transl_elong_EF1B/ribosomal_S6
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006414 translational elongation
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0005840 ribosome
molecular_function GO:0003746 translation elongation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G02260.1CSPI06G02260.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00824EF1BD_1coord: 161..169
scor
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00825EF1BD_2coord: 275..286
scor
IPR010987Glutathione S-transferase, C-terminal-likeunknownSSF47616GST C-terminal domain-likecoord: 71..132
score: 2.21
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 199..286
score: 2.0
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 197..286
score: 7.4
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainunknownSSF54984eEF-1beta-likecoord: 194..286
score: 1.96
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3DG3DSA:3.30.70.60coord: 191..286
score: 3.2
NoneNo IPR availableunknownCoilCoilcoord: 169..189
scor
NoneNo IPR availablePANTHERPTHR11595ELONGATION FACTOR 1-BETAcoord: 43..286
score: 7.3E
NoneNo IPR availablePANTHERPTHR11595:SF27SUBFAMILY NOT NAMEDcoord: 43..286
score: 7.3E