CsaV3_6G000720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G000720
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGrowth-regulating factor like
Locationchr6 : 468453 .. 470354 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGTTAAACCCTGACTATCGAGTTGTGTGTGAGATCTGCAAGAAAACAAGAGAGAGAGAATAAGAGAGAGGGAGAGAGGGAGAGAGATTTTTCCATCTTCAAGTTTTTCTTCTTTTTTTTTTCTCACCCGAGAAAATAAGAGAAAATTCGTCAGAAAATTTTCGAGCGGATTATGTACAAATTTATATAATCTTTTGTGGCCGTTTTCGCTTTTGTGTTCTGGAATCTGCTTCTGGTTTTTTTCTTTTTTGTTCTCTCTTCGTTTTTTCTTCTCCGTCATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGGTTTATATTTAATATATATATAGAGAGAGAGAGATATGAAGAAATGGAGAAATTTCTTATTCTTTATTCTTTTAAATCTTCAGTCTCTTCTTCTTCTTCTAGATCTGCTATTAATTTACCTGTTCTCTTTTCTCTTTATTTCCCTCTCTTTTTAGGGTTCTTCGTTTCCCCTTCCACTTTAGGGTTCATTCCAAAACCCTAAAAATTATCCTCATTCTTCTCGCGATTAGGGTAATGAATCTTACTTACTTTCATTTCTATTTCTCTTTGTTTCATTTTTGCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGGTGAGTTTACTTGTTACTTTTCTTGCTGATATTTATTTTTGCATTGTTTCTGGTCTTTTGTTTTGCTTTGTTTCGTTTTTTGTGTGTGTGATTCTTTCCCTTGCGTAATGGGTGACGAACTAAACACTCATACGATAATCTGAAATCGTTTCTGTGGAGAGAGATATTCTGGATGTTTGATTGTTATTGTCTGCCTGTGTGGATTTTGAAGATGGTGTTTGAAATTTTATTTATATATATGAATCACAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAAAAGAAGAAGTTGGATTTGAATTTGGAATTAGGACTTTGGGTTTTGGTTTTCGTGGTGGGAAATTATTTGTGATGGTTTTTCTTCTTCGTGTTTGAAACAATTGTTTGTTAGGGTTGTGAAGGATTTCTCGTTTTTCTTTTTTATTTTTTCTTTTTCTTCTTTCTTCTTTCTTCTTTCTTTTTTCTTTTTTCTTTTTGGTGTAACATATTATTATTATTAATATTA

mRNA sequence

ATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAA

Coding sequence (CDS)

ATGAGGATCCGGAAGAACGCGAAGTTATCGCCACTGTTGTTTTCGGCTATGGAGTCGTCCTCCGTTCCTGAAGCTCTTCAGACGCACATTTGTCAGTTGAATCAGTCGCCATGGGATGTGATTCCTCTTCACCAACACGACACGAACCAGCTCGAGGAGGCTGAAGATAGCTTCAATGAAAATGCTAGCTTCGGCGATTCTGTCGGAGCTGTTGAGAGCGTCTCGTCGATGATGGAGGAGTCGGGGAAATTATCGAATAATAATATTGTTATTACCAACGGGAATGAAGTAATGGCGGATAAGGATGGGGATTATTGTGAAGATTTTGATGAAAATGGAAACGGATTCGAGAAATTAGTCGATAGCAGTTTGAAATGTAAGAAACAATTTAAAGAGGAAGATTATTCTTCGTTTAGCTCCGACATCCACCACCGCCGTTCATTTCTTAGGTCTAGCGAGAATAATTATTACTCTACTCTCGATAATTGCTCGATTTCGAAAAAATCCGCCACCGGAGGTACGGTATCGCGGCGGATACGACCGGCAAGGTGTTCGAAGAAGGCGGTTAATGCAGCGGCGGGTGGATCAAATCCGTACGAATTTTATTATTATTCTGGATTCGGGCCGCTGTGGGGGAAGAAACGACGGGATAGGGGAGGAGAGGAAGACGGTGGGAAATCGAGCGAAAATACGACGGGAATTCGGAGCAATGCGACGACGCCGTCACCGTCTGACATGGAGGAGTTGGATTATGTGGAATACGATGAGGACGATGAGGAGGAGGACGGCGACGGTGAGGGCGAGGGCGGGAAAAAACGGATGAGGAAGCCGGTGAAAGCGCGGTCATTGAAATCGCTGATGTAA

Protein sequence

MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSPSDMEELDYVEYDEDDEEEDGDGEGEGGKKRMRKPVKARSLKSLM
Homology
[Close]
BLAST of CsaV3_6G000720 vs. NCBI nr
Match: XP_011656350.1 (PREDICTED: uncharacterized protein LOC105435722 [Cucumis sativus])

HSP 1 Score: 484.6 bits (1246), Expect = 2.4e-133
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180
           DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR
Sbjct: 121 DSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIR 180

Query: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240
           PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT
Sbjct: 181 PARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATT 240

Query: 241 PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM
Sbjct: 241 PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 287

[Close]
BLAST of CsaV3_6G000720 vs. NCBI nr
Match: KGN45675.1 (hypothetical protein Csa_6G005150 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 

Query: 17  MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 76
           MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS
Sbjct: 1   MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 60

Query: 77  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 136
           MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS
Sbjct: 61  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 120

Query: 137 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 196
           SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS
Sbjct: 121 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 180

Query: 197 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX 256
           NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX
Sbjct: 181 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX 240

Query: 257 XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 271

[Close]
BLAST of CsaV3_6G000720 vs. NCBI nr
Match: XP_022964376.1 (uncharacterized protein LOC111464410 [Cucurbita moschata])

HSP 1 Score: 325.5 bits (833), Expect = 1.9e-85
Identity = 217/290 (74.83%), Postives = 231/290 (79.66%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPE-ALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 60
           MRIRKNAKLSPLLF A+E  SVPE  LQTH+CQLNQSPWDVIPLHQH TNQLEEAEDSF 
Sbjct: 1   MRIRKNAKLSPLLFLAVE--SVPEFHLQTHVCQLNQSPWDVIPLHQHATNQLEEAEDSFV 60

Query: 61  ENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKL 120
           ENAS GDS+GAV+SV+S ME S K SNNNI+IT+ +EVMADKDGD  ED DENG+GFEKL
Sbjct: 61  ENASLGDSIGAVDSVAS-MEGSAKFSNNNIIITDESEVMADKDGDNREDLDENGDGFEKL 120

Query: 121 VDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRI 180
           VDSS KCKKQ +EEDYSSFS D H  R+  RSSENNYY T +NCS +KKSATG T  R  
Sbjct: 121 VDSSWKCKKQIREEDYSSFSPDHHRHRTLPRSSENNYYPTPNNCSRTKKSATGDTAWRLT 180

Query: 181 RPARCSKKAVNAAA-GGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           RP R SKKAV+AAA GGSNPYEFYYYSGFGP WGKKR           SSENT GIRSNA
Sbjct: 181 RPTRVSKKAVSAAAVGGSNPYEFYYYSGFGPQWGKKR-----XXXXXXSSENTMGIRSNA 240

Query: 241 TTPS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           TTPS          XXXXXXXXXXXXXXXXXXXXXXX KPVKARSLKSLM
Sbjct: 241 TTPSEINSADLDYVXXXXXXXXXXXXXXXXXXXXXXXRKPVKARSLKSLM 282

[Close]
BLAST of CsaV3_6G000720 vs. NCBI nr
Match: XP_023514816.1 (uncharacterized protein LOC111779019 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.6 bits (828), Expect = 7.0e-85
Identity = 216/290 (74.48%), Postives = 230/290 (79.31%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEA-LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 60
           MRIRKNAKLSPLLF A+E  SVPE  LQTH+CQLNQSPWDVIPLHQH TNQLEEAEDSF 
Sbjct: 1   MRIRKNAKLSPLLFLAVE--SVPEVHLQTHVCQLNQSPWDVIPLHQHATNQLEEAEDSFV 60

Query: 61  ENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKL 120
           ENAS GDS+GAV+SV+S ME S K SNNNI+IT+ +EVMADKDGD  ED DENG+GFEKL
Sbjct: 61  ENASLGDSIGAVDSVAS-MEGSAKFSNNNIIITDESEVMADKDGDNREDLDENGDGFEKL 120

Query: 121 VDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRI 180
           VDSS KCKKQ +EEDYSSFS D H  R+  RSSENNYY T +NCS +KKSATG T  R  
Sbjct: 121 VDSSWKCKKQIREEDYSSFSPDHHRHRTLPRSSENNYYPTPNNCSRTKKSATGDTAWRLT 180

Query: 181 RPARCSKKAVNAA-AGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           RPAR SKKAV+AA  GGSNPYEFYYYSGFGP WGKK            SSENT GIRSNA
Sbjct: 181 RPARVSKKAVSAAVVGGSNPYEFYYYSGFGPQWGKK-----XXXXXXXSSENTMGIRSNA 240

Query: 241 TTPS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           TTPS          XXXXXXXXXXXXXXXXXXXXXXX KPVKARSLKSLM
Sbjct: 241 TTPSEINSADLDYVXXXXXXXXXXXXXXXXXXXXXXXRKPVKARSLKSLM 282

[Close]
BLAST of CsaV3_6G000720 vs. NCBI nr
Match: XP_022999919.1 (uncharacterized protein LOC111494252 [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 9.5e-74
Identity = 201/291 (69.07%), Postives = 214/291 (73.54%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEA-LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 60
           MRIRKNAKLSPLLF A+E  SVPE  LQTH+CQLNQSPWDVIPLHQH TNQLEEAEDSF 
Sbjct: 1   MRIRKNAKLSPLLFLAVE--SVPEVRLQTHVCQLNQSPWDVIPLHQHATNQLEEAEDSFV 60

Query: 61  ENASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKL 120
           ENAS GDS+GAV+SV+S ME S K SNNNI+IT+ +EVMADKDGD  ED DENG+GFEKL
Sbjct: 61  ENASLGDSIGAVDSVAS-MEGSAKFSNNNIIITDESEVMADKDGDNREDLDENGDGFEKL 120

Query: 121 VDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRI 180
           VDSS KCKKQ +EEDYSSFS D                    NCS +KKS+TG T  R  
Sbjct: 121 VDSSWKCKKQIREEDYSSFSPDHXXXXXXXXXXXXXXXXXXXNCSRTKKSSTGDTAWRLT 180

Query: 181 RPARCSKKAVNAA-AGGSNPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNA 240
           RPAR SKK V+AA  GGSNPYEFYYYSGFGP WGK              SENT GIRSNA
Sbjct: 181 RPARVSKKTVSAAVVGGSNPYEFYYYSGFGPQWGK-----XXXXXXXXXSENTMGIRSNA 240

Query: 241 TTPS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           TTPS           XXXXXXXXXXXXXXXXXXXXXXX KPVKARSLKSLM
Sbjct: 241 TTPSEINRADLDYVEXXXXXXXXXXXXXXXXXXXXXXXRKPVKARSLKSLM 283

[Close]
BLAST of CsaV3_6G000720 vs. TAIR10
Match: AT4G00310.1 (Putative membrane lipoprotein)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11
Identity = 72/240 (30.00%), Postives = 96/240 (40.00%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHD----TNQLEEA-- 60
           MRIRKN KLS +L S        E   T++C LNQSPWDVIP+        TN ++ +  
Sbjct: 1   MRIRKNTKLSSVLLSTAGCGG--ERPDTYVCHLNQSPWDVIPVSSSGDCELTNLVDSSWF 60

Query: 61  ---------------------EDSFNENASFGDSVGAVESVSSMMEESGKLSNNNIVITN 120
                                EDSFN N S GD     +  +S +      SN ++V   
Sbjct: 61  LPLSXXXXXXXXXLIHKFIGEEDSFNGNVSLGDCNDTAQRFNSSVS-----SNQSLVSVE 120

Query: 121 GNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSE 180
              + A ++  Y    +      E  +D S         +DY   S  +        S +
Sbjct: 121 KLNLNAAEEDKYAISPE-----VEDPMDQS---------DDYDKKSEALEPNSPVKTSGD 180

Query: 181 NNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGK 214
           +            K   T  T  +R RP    KK   +A    NPYEFYYYSGFGP WG+
Sbjct: 181 D-----------EKVVVTIPTAPKRGRPRGSGKKV--SAPALKNPYEFYYYSGFGPRWGR 206

[Close]
BLAST of CsaV3_6G000720 vs. TrEMBL
Match: tr|A0A0A0K7G9|A0A0A0K7G9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005150 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 6.0e-125
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 

Query: 17  MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 76
           MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS
Sbjct: 1   MESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNENASFGDSVGAVESVSS 60

Query: 77  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 136
           MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS
Sbjct: 61  MMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLVDSSLKCKKQFKEEDYS 120

Query: 137 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 196
           SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS
Sbjct: 121 SFSSDIHHRRSFLRSSENNYYSTLDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGS 180

Query: 197 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX 256
           NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX
Sbjct: 181 NPYEFYYYSGFGPLWGKKRRDRGGEEDGGKSSENTTGIRSNATTPSXXXXXXXXXXXXXX 240

Query: 257 XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 288
           XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXKPVKARSLKSLM 271

[Close]
BLAST of CsaV3_6G000720 vs. TrEMBL
Match: tr|A0A1S3C7F3|A0A1S3C7F3_CUCME (uncharacterized protein LOC103497701 OS=Cucumis melo OX=3656 GN=LOC103497701 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.8e-68
Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNE 60
           MRIRKNAKLSPLLFSAMESSSVPE LQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFN 
Sbjct: 1   MRIRKNAKLSPLLFSAMESSSVPEVLQTHICQLNQSPWDVIPLHQHDTNQLEEAEDSFNG 60

Query: 61  NASFGDSVGAVESVSSMMEESGKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120
           NASFGDSVGAVESVSSMMEES KLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV
Sbjct: 61  NASFGDSVGAVESVSSMMEESAKLSNNNIVITNGNEVMADKDGDYCEDFDENGNGFEKLV 120

Query: 121 DSSLKCKKQFKEEDYSSFSSDI 143
           DS+LK KKQFKEEDYSSFSSDI
Sbjct: 121 DSNLKFKKQFKEEDYSSFSSDI 142

[Close]
BLAST of CsaV3_6G000720 vs. TrEMBL
Match: tr|B9GQB5|B9GQB5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G161700v3 PE=4 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 148/311 (47.59%), Postives = 181/311 (58.20%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQ---HDTNQLE--EAE 60
           MRIRKNAKLS L+FS     S  + LQTH+CQLNQSPWDVI   Q   + ++ L   E E
Sbjct: 1   MRIRKNAKLSSLVFS---HGSGAQPLQTHVCQLNQSPWDVISFSQETYYPSSSLSQFEGE 60

Query: 61  DSFNENASFGDSVGAVESVSSMMEESG------KLSNNNIVITNGNEVMADKDGDYCEDF 120
           DS N N S GDS+GAVESV+SMM E        K+  +N+VI + N    D +G+   + 
Sbjct: 61  DSLNGNGSLGDSIGAVESVASMMMEDSEQKGMIKMKVDNMVIIDDNH---DNEGNRRSEM 120

Query: 121 DENGNGFEKLVDSSLK-CKK------QFKEEDYSSF-SSDIHHRRSFLRSSENNYYSTLD 180
            ++  G +   +  LK C K        K E  +     D HH  + L+SS  N    ++
Sbjct: 121 LDDYEGMKIDSEFELKNCNKTDGKGWHCKNETRNGLPMCDHHHHLTSLKSSSCN-NGNIN 180

Query: 181 NCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRGG- 240
             +I+ K    GT     R  R +K A   ++  SNPYEFYYYSGFGPLWGK+R DR   
Sbjct: 181 GSAIATKKPDKGTCITGARRGR-AKSAKKGSSSNSNPYEFYYYSGFGPLWGKRRGDRDAV 240

Query: 241 EEDGGKSSENTTGIRS--NATTP--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 288
            ++  K  +N T I S    TTP  S     XXXXXXXXXXXXXXXXXXXXXXXXXXX K
Sbjct: 241 NKNEDKDVDNGTIIDSMTQNTTPFSSSSPIEXXXXXXXXXXXXXXXXXXXXXXXXXXXRK 300

[Close]
BLAST of CsaV3_6G000720 vs. TrEMBL
Match: tr|B9RDV2|B9RDV2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1616170 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-27
Identity = 139/324 (42.90%), Postives = 174/324 (53.70%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQ--HDTNQLE--EAED 60
           MRIRKNA LS L+FS    +S  E LQTH+CQLNQSPWDVIP  Q  + ++ L   E ED
Sbjct: 1   MRIRKNANLSSLMFS---HASGTEVLQTHVCQLNQSPWDVIPFSQEAYQSSHLHQYEGED 60

Query: 61  SFNENASFGDSVGAVE--SVSSMME------ESGKLSNNNIVITNGN-----------EV 120
           SF+ N S  DS+GAVE  SV+S+ME       + K+  NN+VI + +           + 
Sbjct: 61  SFSGNGSLADSIGAVESSSVASLMEYDPEDKAAIKIKVNNMVIVDDDNYEIRRINQEKKT 120

Query: 121 MADKDGDYCEDFDENGNGF--EKLVDSSLKCKKQFKEEDYSSFSSDIHHRRSFLRSSENN 180
           M+++D ++     +    +   K+      CK + KE      S   HH  S L+SS NN
Sbjct: 121 MSEEDCEFNHKLKKGEKIYCCNKIDGKEWHCKNELKE----GHSMCDHHILSSLKSSYNN 180

Query: 181 ------YYSTLDNCSISK-KSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFG 240
                   S  ++ SI K + A  GT  RR R     K A    +  SNPYEFYYYSGFG
Sbjct: 181 NVTSACIASPTNSPSIKKPEKAVAGT--RRGR----GKGAKKGQSSSSNPYEFYYYSGFG 240

Query: 241 PLWGKKRRDRG-GEEDGGKSSENTTGIR-SNATTP---SXXXXXXXXXXXXXXXXXXXXX 288
           PLWGK+R DRG G ++  K SE +  I   + TTP                XXXXXXXXX
Sbjct: 241 PLWGKRRGDRGEGNKNESKESEISGAIAIHHNTTPFSAPLPIEDHQELDFVXXXXXXXXX 300

[Close]
BLAST of CsaV3_6G000720 vs. TrEMBL
Match: tr|A0A2C9WNY9|A0A2C9WNY9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G254700 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 144/314 (45.86%), Postives = 176/314 (56.05%), Query Frame = 0 

Query: 1   MRIRKNAKLSPLLFSAMESSSVPEALQTHICQLNQSPWDVIPLHQH---DTNQLEEAEDS 60
           MRIRKNA +S L+FS    +S PEALQTH+CQLNQSPWDVIP  Q     +    E EDS
Sbjct: 1   MRIRKNANISSLMFS---HASGPEALQTHVCQLNQSPWDVIPFAQETYPSSLHQFEGEDS 60

Query: 61  FNENASFGDSVGAVE-SVSSMMEESG-----KLSNNNIVITNGNEV--MADKDGDYCEDF 120
           FN N S GDS+GAVE SV+S+ME++      K+  +N+VI +  E+  + +K   +  D+
Sbjct: 61  FNGNGSLGDSIGAVESSVASLMEDAEDKAAIKMRVDNMVIDDNYEMERIPEKKRVF-NDY 120

Query: 121 DEN--GNGFEKLVDSSLKCKKQ-------FKEEDYSSFSSDIHHRRSFLRSSEN-NYYST 180
            E   GN F+      + C  +        K E     S   HH      S++N      
Sbjct: 121 GEMKIGNEFKFKKGEKIHCCNKSDGKGWHCKNEPRDGHSMCDHHLLKSYASNDNVTCCLG 180

Query: 181 LDNCSISKKSATGGTVSRRIRPARCSKKAVNAAAGGSNPYEFYYYSGFGPLWGKKRRDRG 240
           L     SKK     T  RR R  + SKK  +++   SNPYEFYYYSGFGPLWGK+R +  
Sbjct: 181 LPTSPSSKKQEKAMTGGRRGR-TKASKKGPSSS---SNPYEFYYYSGFGPLWGKRRGE-- 240

Query: 241 GEEDGGKSSE------NTTGIRSNATTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 288
           G + G + SE       T     N T  S          XXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GNKSGVRESEIDGINIATMSSPQNTTPSSTPRIENREEFXXXXXXXXXXXXXXXXXXXXX 300

The following BLAST results are available for this feature:
BLAST of CsaV3_6G000720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656350.12.4e-133100.00PREDICTED: uncharacterized protein LOC105435722 [Cucumis sativus][more]
KGN45675.19.1e-125100.00hypothetical protein Csa_6G005150 [Cucumis sativus][more]
XP_022964376.11.9e-8574.83uncharacterized protein LOC111464410 [Cucurbita moschata][more]
XP_023514816.17.0e-8574.48uncharacterized protein LOC111779019 [Cucurbita pepo subsp. pepo][more]
XP_022999919.19.5e-7469.07uncharacterized protein LOC111494252 [Cucurbita maxima][more]
BLAST of CsaV3_6G000720 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00310.12.8e-1130.00Putative membrane lipoprotein[more]
BLAST of CsaV3_6G000720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K7G9|A0A0A0K7G9_CUCSA6.0e-125100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G005150 PE=4 SV=1[more]
tr|A0A1S3C7F3|A0A1S3C7F3_CUCME8.8e-6896.48uncharacterized protein LOC103497701 OS=Cucumis melo OX=3656 GN=LOC103497701 PE=... [more]
tr|B9GQB5|B9GQB5_POPTR1.5e-2747.59Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G161700v3 PE=... [more]
tr|B9RDV2|B9RDV2_RICCO7.5e-2742.90Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1616170 PE=4 SV=1[more]
tr|A0A2C9WNY9|A0A2C9WNY9_MANES1.7e-2645.86Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G254700 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009791 post-embryonic development
biological_process GO:0048731 system development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G000720.1CsaV3_6G000720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..287
NoneNo IPR availablePANTHERPTHR34680FAMILY NOT NAMEDcoord: 1..287

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G000720CSPI06G00650Wild cucumber (PI 183967)cpicucB364
CsaV3_6G000720Cucsa.135670Cucumber (Gy14) v1cgycucB203
CsaV3_6G000720CmaCh17G004450Cucurbita maxima (Rimu)cmacucB0440
CsaV3_6G000720CmaCh08G009000Cucurbita maxima (Rimu)cmacucB1073
CsaV3_6G000720CmoCh17G004240Cucurbita moschata (Rifu)cmocucB0432
CsaV3_6G000720CmoCh08G008710Cucurbita moschata (Rifu)cmocucB1055
CsaV3_6G000720Cp4.1LG12g03840Cucurbita pepo (Zucchini)cpecucB0165
CsaV3_6G000720Cp4.1LG17g03660Cucurbita pepo (Zucchini)cpecucB0395
CsaV3_6G000720CsGy6G000700Cucumber (Gy14) v2cgybcucB298
CsaV3_6G000720Carg05618Silver-seed gourdcarcucB0081
CsaV3_6G000720Carg13835Silver-seed gourdcarcucB0637
CsaV3_6G000720Cla001243Watermelon (97103) v1cucwmB564
CsaV3_6G000720MELO3C021196Melon (DHL92) v3.5.1cucmeB430
CsaV3_6G000720ClCG06G003540Watermelon (Charleston Gray)cucwcgB502
CsaV3_6G000720Lsi09G015820Bottle gourd (USVL1VR-Ls)cuclsiB418
CsaV3_6G000720MELO3C021196.2Melon (DHL92) v3.6.1cucmedB420
CsaV3_6G000720Cla97C06G112970Watermelon (97103) v2cucwmbB492
CsaV3_6G000720Bhi12G001677Wax gourdcucwgoB550
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G000720Cucumber (Gy14) v2cgybcucB152
CsaV3_6G000720Cucumber (Gy14) v2cgybcucB243
CsaV3_6G000720Cucumber (Gy14) v1cgycucB471
CsaV3_6G000720Cucurbita moschata (Rifu)cmocucB0363
CsaV3_6G000720Cucurbita pepo (Zucchini)cpecucB0242
CsaV3_6G000720Wild cucumber (PI 183967)cpicucB189
CsaV3_6G000720Wild cucumber (PI 183967)cpicucB307
CsaV3_6G000720Bottle gourd (USVL1VR-Ls)cuclsiB429
CsaV3_6G000720Melon (DHL92) v3.5.1cucmeB426
CsaV3_6G000720Melon (DHL92) v3.5.1cucmeB511
CsaV3_6G000720Melon (DHL92) v3.6.1cucmedB417
CsaV3_6G000720Melon (DHL92) v3.6.1cucmedB499
CsaV3_6G000720Watermelon (Charleston Gray)cucwcgB456
CsaV3_6G000720Watermelon (97103) v1cucwmB529
CsaV3_6G000720Watermelon (97103) v2cucwmbB431
CsaV3_6G000720Wax gourdcucwgoB560
CsaV3_6G000720Cucumber (Chinese Long) v3cuccucB151
CsaV3_6G000720Cucumber (Chinese Long) v3cuccucB204