CsaV3_6G000670 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G000670
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	AT-rich interactive domain-containing protein
Location	chr6 : 438796 .. 443265 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGGTACTTTACATACATGCTCATGTTGTTTGCATTTAGATCTTTACTCATTTAAAATTGTTGATTTGCATGACGTGGTGATAAAAAAATGTCTATCTCTGTGCATGTATGAAGTTTGTCTCATGATAAAGCTGATTGTGGTAGTTTTTAGGCTGCTTTAGTCTTGTTTTGTTTTTCATATTATCAGTCCATCTTGAAATGATTTTCATACCATGCATTTTGATTAGTATATATTTACATCTTAAATAATGTTCTTGTCATTGTAAACTGAAGATCCTCATTGTGAAAGCCAAAATGGAGCTAAGACTTAATCTTTAGAATTTATCGCTGAATCACTGTAGTAATTTTTTTTTCTTTATCTGCCATAATATCTATCGTGCTAGTTTTTAATGTTATGATCCTCTTTAGTTTTTAGGAACTTCTGCAGTGGTCTTTCTTTATGTTGCTTATGGTTCCATGACCTTGTGTCTGTGTGTAAATAAAACTAAAGAATCCATCTTATCAATTCTGATAATTATGTCTTCTTAAGAAGATACGTGGAGGATTAGCTGTTTAAAATAGTGGTTCCCTTATTAAGAAGAAAATTAAACTATTTAAGACATCGATTTCATTTAGCCTTGTTCTGTTGTGGTCAATAGCTTGAAGCTTCAGCCGCTATTTTTTATTTTTGATCTGCTTGTAGTCACTAGTCAGAGTGTGCTTGAAAATGTTCTTAAGAGTATAAAAAATGCATTGAGAACATTTTCTAGGTTGGGTGATTGCAGATGCATGAATGATTTTAGTACTCTGAGAGGAAGTACTTTAGTAGAAACACTAAGCAGAAAAAAACATCATTAATTTGGAATTATTTTACCCTAAGAAATGTAGAATAGTAGCCTGTTTTTTAGAAACACGAAATAGAATAGTAGCTACAGTGTGATATTTACAAATTCTTAAGATTTTATCAGATATCCAAAATTGTCAAGTTAACCCGGAAGGACATGCATCATCTACATTAAATAAAATACCAAAGTATAACTATGATTAACATCATCTACGTTAAATAAAATACCAAAGTATAACTATGATTAACATTTAGGGATTATTTGATTCACTAGAAAAAAAAATGTTTTTCAAAACATTTTTATTTAAAACGCTTTTTATAAAACTTTTTTTAATATATGTGGGTGTACTAGTCAACTTAAGTACACCTCGACTAATCTCATGGGACAACCTGTCCGACTCTACAATATTTTGATGTCAAGAAAACTAGTAGAAAATTAATTTTTAGGTAAGTGGTCAATGTTCACTAGAAAAATTTGTTTAAAATAAACTTTAAAAATATTTTAAAATTTATTTTGAATGGTTGCTAAAATTAAAAAAGAAAAAACATTTTTATTTAAAACCGTTTTTTATATATATGAATTTTCTGGTCAACTTAAGTCCACCTCAACTAATCTCATGGTACTACATTTTGGTGCTTAGAAAACTTGATAGGAAATTAGTTTTTAGGTAAGTAGTCAATATCTACTATAAAAACTATTTAAAATAAACTTTGAAAGTGTTTCAAAATCTATTTTGCTAAATATTTCAATGTTTTCTATTTTTAAAATTAAATACTTGAAAAATTAAACGAAACACAGGACACCCTTAGATTCTCCCCATGTTAACAGAGTGAATTTGTAAAATTTAATTAGATTTTCTTTTTACAAAGCAACTGGTAATATATTGATTAAATTGGAAAATTGATCCCTATGATTTTGGAGAAAGCTTTGTGGTTTTAAAACTTAATCGTTCTTATGGTTTGAAGAATCTCATAACTAGCTCTTATTGTTTGATTTCTGCCTTAATTATGTGAAATTCAACTGGTAAACAAACTCTAATTCTATTTTTTTTTCTTTGGTGCCTTGAAGCACAAAATATTATTTTGTAATTATAGCCTAGGTCCAATTCTACAAAATTGGAAGCCGATGCTTTATTAGTTTTTGTTGGGAGAGGGGTTGCTCATCCCTCCCCTAGCTCTCTCTCTCTTCGTTTTTTTACCTTTTTTTTAAAAAATATATATTTTCAGTTACTTTAAAAAGGAGAACAAAAAAACTAGAAAACCTAATCTAGACTAAGAATTCATTTTGATACCCATCGGTGTTTTGGATCAATTTATATGCACCTCGACAGAGATAACCAACCTAACCCTACATCATTTAGATGTCATGGAATCTTACAAGATATTATACTTTGGTAGTGGTCATCATGGATCGAGCTCATGATCTCTTAGTCATTTATTTTATTTTTACCACTATATCCACAATGGTTTGTAATCTAGACTAAAAATATTTCTATCCAACCATTAAAATATCTAAATGTAGCCTCAAAATTGAGGAGATTTAAAAGCACCCAAAGTTTAGTTAAATAGCAATCTATCGCTATCACAAAAGCTAATACCAACTAAAAATAATCTTTCATTCATAGTAGCTACTAGCTACAAAGGTCGTTAAAGAAAAGTTGACCATTTTATCTCTTTAAGTTTTATCCTTGCCTTATTTTGATTCCAACCATTGAAGAACTCGAGATTTCATAATTTGGAGAATGCCCTTCATGAACTGTGCAATTGAGAATGTATACTAACTTTACCATAAACCATAAATTGATAATTAAATCGTTATTCTTCACCCTACTCTATTTTTGGTTTTTTAACTAAGATTTTTTTCCTTGTTAATTTTCTAATCTTAGGCTCTATTTCTAGTACTAACACTAAATTTTATAAGTGTACTACATATGAGAGGTGTTTTACATCATAGAAATTAAACAACGATAAAGAAAAGATAGTATGCAAAGTCTAGGGACCAAAAAATATTGACAGCAAGACAATGAAAGCAGATGAAAGAATTGACTACAAGAAAATGAAAGCAAATGATTGTGGAAGTTAGGGATCAAAATAAGATTAAAATCATTTTTGTGCCCTAAAATTTAGAACTTATATTAGTTCCTTTATTGATGTTGAGTTTAAATAATTTCTTATTGCATCAATATGTTTGAAATTTTATTATACTGTGTATAGAAACGAATTAAATTCGAAGGAAAGGAAGAATAAATGAAACAAAAAGTTAATATTTCTATATAGGTAAAATTGATTAATGTACATATATGTTCTTTTTAAAAAAAGGATTTAACAGATGTAAACAACATAATGATCAGATTACTATTTCTCATCTATTTATTCTCCTTCCTAGTTGACCACATCATTTCTATTACTTTAGCTTGAAAGTCTTTATTATTATTTGGTTCAATTTATCTTCTCTATTGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

mRNA sequence

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

Coding sequence (CDS)

ATGTTGTCAGATGAGTTCATGAATTGTATTGCCTTTGACGACAATTCCATTTCAGATTTTTCCAAGCGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGATGTATTTCCTCGCAGAAGCAAGAAATTCAAGGATATTGAACATTGCAATACTGAAAATGGGGATGTACAAATTATTGATCCACCTTTCGTCAAGGAAACAAATGTTGTCCAGGAGAAGAGTAAGCAGGAACCAATGTTGGGATTGCTTGATTGGCTTAAAGGTATTGCAAGAAACCCTTGCGATCCCTCAATATCCTCATTACCAGAAAAGTCAAAATGGAAATCATATGGAAATGAAGAGATTTGGAAACAGGTTTTGGTGGTTCGAGAGGAAATGTTCTTGAAAAGACAAGTTGATTCAAGTAGCGAACAATCTTTCATGCAGAAAAACCAGAAGATGCATCCTTGTATGTACGATGATGATACAGCTCCGATTTACAATCTTAGGAAGAGATTAAGCTTGGATAAAAAGGATCTTTCTCAAGAACCTGTTTCTAAAGCAAGTGATTCGTCTCCTACAGATTCATTAGATGATTACAAGCCCGTTCCTCTGGGGTCAGATTATCAAGCTCGAGTCCCGGAATGGAATGGTGTGATATCCAAGAGTGATTTAAAGTGGTTGGGAACCCAAGACTGGCCCTTGAAGAAAGGAAGGAACAGATATCTAGTTGAAAGGGATCCCATTGGAAGAGGAAGGCGAGATCCTTGTGGGTGCATGGACCCCAATTCGGTTGGCTGTGTCCAATTTCACGTTTCTGAGAAAAGGCACAAATTGAAGCTTGAGTTGGGCGACGCGTTTCTTCAATGGAGATTTGATAAGATGGGGGAAGAAGTTACATTTGCTTGGACGGTGGACGATGAGAAAAAATTCGAGGACATAGTGTCATCAAACCCTCCGTCCCTTGGGATATCTTATTGGGAAGATATCATTGAGTCATTTCCTTCTAGGAGCAAGGCAGATCTTGTTGGCTACTACTATAATGTCTTTCTTTTGCGTCGTAGAGGACACCAAAATCGAGTTACGCCAAATGAAATCAATAGTGATGAGGAATCAGAATCCGGAACTGCAACCAATGGATTTGGAAACGAAGTGCATAATTCATCTGGCTCCATTTTCTACTCTCCTAAGAAGCCACGATAA

Protein sequence

MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQIIDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR

Homology

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BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_004138586.1 (PREDICTED: AT-rich interactive domain-containing protein 1-like [Cucumis sativus] >XP_011656344.1 PREDICTED: AT-rich interactive domain-containing protein 1-like [Cucumis sativus] >KGN45671.1 hypothetical protein Csa_6G004620 [Cucumis sativus])

HSP 1 Score: 817.4 bits (2110), Expect = 2.1e-233
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_008458204.1 (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008458205.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_016902234.1 PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 738.0 bits (1904), Expect = 1.6e-209
Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNC+AFD+NSISDFSKRI DMKSDRMK+GD FPRRSKK KDI H N EN DVQI
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPP +KETNVVQEKSKQEPMLGLLDWLK IARNPCD SISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLSLDKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKA+DSSPTDSLDDYKPV LGSDYQARVPEWNGVIS+SDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIG+GRRDPCGCMD NSVGCVQFHVSEKR +LKLELGDAFL+WRFD+MGE+VT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           +DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESGTAT  FGNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_023547658.1 (AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP_023547659.1 AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 699.5 bits (1804), Expect = 6.5e-198
Identity = 333/395 (84.30%), Postives = 364/395 (92.15%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLS+EFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E  D++I
Sbjct: 1   MLSEEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNETEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+EPMLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEEPMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDTVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WP+KKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPMKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELG+AFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGNAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_022958968.1 (AT-rich interactive domain-containing protein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 698.4 bits (1801), Expect = 1.4e-197
Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E+ D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+E MLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDD  PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELGDAFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670 vs. NCBI nr
Match: XP_022958966.1 (AT-rich interactive domain-containing protein 1 isoform X1 [Cucurbita moschata] >XP_022958967.1 AT-rich interactive domain-containing protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 698.4 bits (1801), Expect = 1.4e-197
Identity = 334/395 (84.56%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMN +AFD+NSISDFSKRI  MKSD+MKSGDVFPRRSKK KDI HCN E+ D++I
Sbjct: 1   MLSDEFMNYVAFDENSISDFSKRILAMKSDKMKSGDVFPRRSKKLKDINHCNNESEDIKI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           ID   VKE N   E+ K+E MLGLL+WLKGIARNPCDPS+ SLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDLRLVKEPNFTPER-KEERMLGLLNWLKGIARNPCDPSVCSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VL+VREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDD  PIYNLRKRLS +KKDLSQEPV
Sbjct: 121 VLLVREEMFVKRQVDSSSEQSLVQRNQRMHPCMYDDDMVPIYNLRKRLSFEKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SK SDSSPTDS DDYKPVPLGSDYQA+VPEWNGVIS+SDLKWLGTQ+WPLKKGRNRYLVE
Sbjct: 181 SKTSDSSPTDSSDDYKPVPLGSDYQAQVPEWNGVISESDLKWLGTQEWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGC D NSVGCV+FHV+EKRHK+KLELGDAFLQWRFDKMGE+VTF+WT 
Sbjct: 241 RDPIGRGRRDPCGCFDANSVGCVKFHVTEKRHKVKLELGDAFLQWRFDKMGEDVTFSWTA 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIV+SNPPSLGIS+W++IIESFPSRSKADLV YYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVTSNPPSLGISFWDEIIESFPSRSKADLVCYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESG  TNG  NEVHNSS SIFYSPKKPR
Sbjct: 361 IDSDEESESGIVTNGLRNEVHNSSDSIFYSPKKPR 394

[Close]

BLAST of CsaV3_6G000670 vs. TAIR10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 265.4 bits (677), Expect = 5.7e-71
Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0


Query: 75  KSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQV 134
           K K+E  L  L WL  +A++PCDPS+  +P++S+W SYG+EE WKQ+L+ R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 135 DSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDD 194
           DS+ E+++ QK QKMHPC+YDD     YNLR+RLS +  D  +      SD   +D  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYKRGKTGNGSDIGSSDEED- 363

Query: 195 YKPVPL-GSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNR--YLVERDPIGRGRRDP 254
            +P  L GS +QA+VPEW G+  +SD KWLGT+ WPL K + +   L+ERD IG+GR+DP
Sbjct: 364 -RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDP 423

Query: 255 CGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 314
           CGC +P S+ CV+FH++ KR KLKLELG AF  W FD MGE     WT  + KK + ++S
Sbjct: 424 CGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLMS 483

Query: 315 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           S PPSL  ++        PS+S+  +V Y+YNV LL+ R  Q+R+TP++I+SD +
Sbjct: 484 S-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

[Close]

BLAST of CsaV3_6G000670 vs. TAIR10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 205.7 bits (522), Expect = 5.3e-53
Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0


Query: 77  KQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDS 136
           K++ + G+L WL  +A +P DP+I  +P  SKWK Y   + W QV   +  + ++R  D+
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQR--DN 277

Query: 137 SS----EQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSL 196
           +        F       HP MY+DD   I  L  R S+   +LS+   S   + S   SL
Sbjct: 278 AELRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSL 337

Query: 197 DDYKP-----------------------------------VPLGSDYQARVPEWNGVISK 256
              +                                    + +G  +QA+V EW      
Sbjct: 338 SKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVD 397

Query: 257 SDLKWLGTQDWPLKKGRN-RYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKL 316
           SD KWLGT+ WP +        +  D +G+GR D C C     V C + H++EKR +LK 
Sbjct: 398 SDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKR 457

Query: 317 ELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKAD 376
           ELGD F  WRF++MGEEV   WT ++EK+F+D++ ++P     S+W +  ++FP + + +
Sbjct: 458 ELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREE 517

Query: 377 LVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGS 387
           LV YY+NVFL+ RR +QNRVTP  I+SD+E   G+    FG +   SSGS
Sbjct: 518 LVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of CsaV3_6G000670 vs. TAIR10
Match: AT5G04110.1 (DNA GYRASE B3)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-32
Identity = 69/183 (37.70%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 198 VPLGSDYQARVPEWNGVISK----------SDLKWLGTQDWP---LKKGRNRYLVERDPI 257
           +P+G  +QA +P W     K          + L+WLGT  WP   LKK      V    +
Sbjct: 361 IPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWPTYSLKK-----TVHSKKV 420

Query: 258 GRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTF-AWTVDDE 317
           G GR D C C  P S  C++ H  E +  L+ E+  AF  W FD+MGEE+   +WT  +E
Sbjct: 421 GEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWEFDQMGEEIVLKSWTAKEE 480

Query: 318 KKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINS 367
           ++FE +V  NP S    +WE    +FP +SK DL+ YYYNVFL++R         N I+S
Sbjct: 481 RRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVFLIKRMRLLKSSAANNIDS 538

[Close]

BLAST of CsaV3_6G000670 vs. TAIR10
Match: AT2G03470.1 (ELM2 domain-containing protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26
Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 196 KPVPLGSDYQARVPEW--NGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGR-RDPC 255
           K V +GS++QA +PE+    ++ +S+ +     +  L +     + + D  G G+ R  C
Sbjct: 121 KQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKEC 180

Query: 256 GCMDPNSVGCVQFHVSEKRHKLKLELG-DAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 315
            C+D  S+ CV+ H+ E R  L   +G + F++    +MGEEV   WT ++E  F  +V 
Sbjct: 181 LCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVY 240

Query: 316 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           SNP S G  +W+ +  +FPSR+  +LV YY+NVF+LRRRG QNR    +++SD++
Sbjct: 241 SNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 295

[Close]

BLAST of CsaV3_6G000670 vs. TAIR10
Match: AT1G13880.1 (ELM2 domain-containing protein)

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-25
Identity = 70/205 (34.15%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 172 KKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQARVPEW---------NGVISKSDLKW 231
           + D+   PV    +      +   K VP+GSDYQA +PE             +   + + 
Sbjct: 102 ESDIPWRPVCSGEEDGYWCPISPRKTVPIGSDYQADIPECVKEEANDQSGQGVGYDEEQV 161

Query: 232 LGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELG-DA 291
            G    P+         E   IG+GR++ C C+D  S+ CVQ H+ E R  L   +G D 
Sbjct: 162 TGKCVIPMPDCE----TEVCKIGKGRKE-CICLDKGSIRCVQQHIMENREDLFATIGYDR 221

Query: 292 FLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYY 351
            L     +MGEEV    T D+E  F +IV SNP S+   +W+ +  +FPSR+  ++V YY
Sbjct: 222 CLDIGLCEMGEEVAARLTEDEEDLFHEIVYSNPVSMDRDFWKHLKSAFPSRTMKEIVSYY 281

Query: 352 YNVFLLRRRGHQNRVTPNEINSDEE 367
           +NVF+LRRR  QNR    +++SD++
Sbjct: 282 FNVFILRRRAIQNRSKSLDVDSDDD 301

[Close]

BLAST of CsaV3_6G000670 vs. Swiss-Prot
Match: sp|Q84JT7|ARID1_ARATH (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.0e-69
Identity = 138/295 (46.78%), Postives = 193/295 (65.42%), Query Frame = 0


Query: 75  KSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQV 134
           K K+E  L  L WL  +A++PCDPS+  +P++S+W SYG+EE WKQ+L+ R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 135 DSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDD 194
           DS+ E+++ QK QKMHPC+YDD     YNLR+RLS +  D  +      SD   +D  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYE--DYKRGKTGNGSDIGSSDEED- 363

Query: 195 YKPVPL-GSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNR--YLVERDPIGRGRRDP 254
            +P  L GS +QA+VPEW G+  +SD KWLGT+ WPL K + +   L+ERD IG+GR+DP
Sbjct: 364 -RPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDP 423

Query: 255 CGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVS 314
           CGC +P S+ CV+FH++ KR KLKLELG AF  W FD MGE     WT  + KK + ++S
Sbjct: 424 CGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLMS 483

Query: 315 SNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEE 367
           S PPSL  ++        PS+S+  +V Y+YNV LL+ R  Q+R+TP++I+SD +
Sbjct: 484 S-PPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

[Close]

BLAST of CsaV3_6G000670 vs. Swiss-Prot
Match: sp|Q9LDD4|ARID2_ARATH (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.6e-52
Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 0


Query: 77  KQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDS 136
           K++ + G+L WL  +A +P DP+I  +P  SKWK Y   + W QV   +  + ++R  D+
Sbjct: 218 KRDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLLVQR--DN 277

Query: 137 SS----EQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSL 196
           +        F       HP MY+DD   I  L  R S+   +LS+   S   + S   SL
Sbjct: 278 AELRYRYHPFRGHQNIHHPSMYEDDRKSIGRL--RYSIRPPNLSKHCSSSCCNGSSLVSL 337

Query: 197 DDYKP-----------------------------------VPLGSDYQARVPEWNGVISK 256
              +                                    + +G  +QA+V EW      
Sbjct: 338 SKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTESGVD 397

Query: 257 SDLKWLGTQDWPLKKGRN-RYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKL 316
           SD KWLGT+ WP +        +  D +G+GR D C C     V C + H++EKR +LK 
Sbjct: 398 SDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRMELKR 457

Query: 317 ELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKAD 376
           ELGD F  WRF++MGEEV   WT ++EK+F+D++ ++P     S+W +  ++FP + + +
Sbjct: 458 ELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQ----SFWTNAAKNFPKKKREE 517

Query: 377 LVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGS 387
           LV YY+NVFL+ RR +QNRVTP  I+SD+E   G+    FG +   SSGS
Sbjct: 518 LVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of CsaV3_6G000670 vs. TrEMBL
Match: tr|A0A0A0KD11|A0A0A0KD11_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 1.4e-233
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV
Sbjct: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE
Sbjct: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR
Sbjct: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670 vs. TrEMBL
Match: tr|A0A1S3C8K0|A0A1S3C8K0_CUCME (AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497705 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 1.1e-209
Identity = 356/395 (90.13%), Postives = 375/395 (94.94%), Query Frame = 0


Query: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60
           MLSDEFMNC+AFD+NSISDFSKRI DMKSDRMK+GD FPRRSKK KDI H N EN DVQI
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120
           IDPP +KETNVVQEKSKQEPMLGLLDWLK IARNPCD SISSLPEKSKWKSYGNEEIWKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180
           VLVVREEMF+KRQVDSSSEQS +Q+NQ+MHPCMYDDDT PIYNLRKRLSLDKKD+SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVE 240
           SKA+DSSPTDSLDDYKPV LGSDYQARVPEWNGVIS+SDLKWLGTQDWPLKKGRNRYLVE
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVE 240

Query: 241 RDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTV 300
           RDPIG+GRRDPCGCMD NSVGCVQFHVSEKR +LKLELGDAFL+WRFD+MGE+VT AWTV
Sbjct: 241 RDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTV 300

Query: 301 DDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNE 360
           +DEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+E
Sbjct: 301 EDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDE 360

Query: 361 INSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 396
           I+SDEESESGTAT  FGNEVHNS GSIFYSPKKPR
Sbjct: 361 IDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of CsaV3_6G000670 vs. TrEMBL
Match: tr|A0A1S3C7F8|A0A1S3C7F8_CUCME (AT-rich interactive domain-containing protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497705 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.2e-195
Identity = 333/369 (90.24%), Postives = 350/369 (94.85%), Query Frame = 0


Query: 27  MKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQIIDPPFVKETNVVQEKSKQEPMLGLLD 86
           MKSDRMK+GD FPRRSKK KDI H N EN DVQIIDPP +KETNVVQEKSKQEPMLGLLD
Sbjct: 1   MKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQIIDPPLIKETNVVQEKSKQEPMLGLLD 60

Query: 87  WLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQVLVVREEMFLKRQVDSSSEQSFMQKN 146
           WLK IARNPCD SISSLPEKSKWKSYGNEEIWKQVLVVREEMF+KRQVDSSSEQS +Q+N
Sbjct: 61  WLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQVLVVREEMFVKRQVDSSSEQSSVQRN 120

Query: 147 QKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPVSKASDSSPTDSLDDYKPVPLGSDYQA 206
           Q+MHPCMYDDDT PIYNLRKRLSLDKKD+SQEPVSKA+DSSPTDSLDDYKPV LGSDYQA
Sbjct: 121 QRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPVSKANDSSPTDSLDDYKPVLLGSDYQA 180

Query: 207 RVPEWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFH 266
           RVPEWNGVIS+SDLKWLGTQDWPLKKGRNRYLVERDPIG+GRRDPCGCMD NSVGCVQFH
Sbjct: 181 RVPEWNGVISESDLKWLGTQDWPLKKGRNRYLVERDPIGKGRRDPCGCMDANSVGCVQFH 240

Query: 267 VSEKRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDII 326
           VSEKR +LKLELGDAFL+WRFD+MGE+VT AWTV+DEKKFEDIVSSNPPSLGISYWEDII
Sbjct: 241 VSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTVEDEKKFEDIVSSNPPSLGISYWEDII 300

Query: 327 ESFPSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEESESGTATNGFGNEVHNSSGS 386
           ESFPSRSKADLV YYYNVFLLRRRGHQNRVTP+EI+SDEESESGTAT  FGNEVHNS GS
Sbjct: 301 ESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEESESGTATIRFGNEVHNSPGS 360

Query: 387 IFYSPKKPR 396
           IFYSPKKPR
Sbjct: 361 IFYSPKKPR 369

[Close]

BLAST of CsaV3_6G000670 vs. TrEMBL
Match: tr|A0A251QHF6|A0A251QHF6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173100 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 194/366 (53.01%), Postives = 256/366 (69.95%), Query Frame = 0


Query: 55  NGDVQIIDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGN 114
           N D  I+DP    E  +   K KQE + G+L+W++ IA++PCDP++ SLPE+SKWKS+GN
Sbjct: 349 NEDAAILDPS-TDEEAISFWKRKQESLCGMLNWVRMIAKDPCDPAVGSLPERSKWKSFGN 408

Query: 115 EEIWKQVLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKD 174
           EE W QVL  RE +F+K+  DS +EQS  QKNQ+MHP +YDD  +  YNLR+RL L+KK 
Sbjct: 409 EENWMQVLWAREAIFVKKHADSGAEQSNWQKNQRMHPSLYDDHFSSSYNLRERLRLEKKL 468

Query: 175 LS--QEPVSK--ASDSSP-------------------TDSLDDYKP--VPLGSDYQARVP 234
           LS    P S+  +  SSP                   T  LD Y P  +PLGS+YQA +P
Sbjct: 469 LSGGTMPQSRTGSESSSPSYSPDMAGMEDQLLGTSDFTSVLDRYPPSHIPLGSNYQAHLP 528

Query: 235 EWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSE 294
           EW G  S+S+LKWLG++ WPL+K  +RYL+ERDPIG+GR++ CGC    S+ CV+FH+SE
Sbjct: 529 EWTGEASESELKWLGSKFWPLEKPEHRYLIERDPIGKGRQESCGCQVSGSIECVRFHISE 588

Query: 295 KRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESF 354
           KR ++K ELG AF  W F++MG+EV  +WT ++EKKF+DIV SNPPSLGI++W+ I +SF
Sbjct: 589 KRLRVKRELGPAFYHWEFNQMGDEVGLSWTAEEEKKFKDIVKSNPPSLGITFWDQIFKSF 648

Query: 355 PSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEES-ESGTATNGFGNEVHNSSGSIF 395
           P +S+ +LV YY+NVFLL RRG+QNR TPN I+SD+E  ESG+ TNGFG+E    S SI 
Sbjct: 649 PKKSRRELVSYYFNVFLLHRRGYQNRFTPNNIDSDDEGLESGSVTNGFGDEERKPSKSIL 708

[Close]

BLAST of CsaV3_6G000670 vs. TrEMBL
Match: tr|M5X794|M5X794_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002218mg PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104
Identity = 194/366 (53.01%), Postives = 256/366 (69.95%), Query Frame = 0


Query: 55  NGDVQIIDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGN 114
           N D  I+DP    E  +   K KQE + G+L+W++ IA++PCDP++ SLPE+SKWKS+GN
Sbjct: 330 NEDAAILDPS-TDEEAISFWKRKQESLCGMLNWVRMIAKDPCDPAVGSLPERSKWKSFGN 389

Query: 115 EEIWKQVLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKD 174
           EE W QVL  RE +F+K+  DS +EQS  QKNQ+MHP +YDD  +  YNLR+RL L+KK 
Sbjct: 390 EENWMQVLWAREAIFVKKHADSGAEQSNWQKNQRMHPSLYDDHFSSSYNLRERLRLEKKL 449

Query: 175 LS--QEPVSK--ASDSSP-------------------TDSLDDYKP--VPLGSDYQARVP 234
           LS    P S+  +  SSP                   T  LD Y P  +PLGS+YQA +P
Sbjct: 450 LSGGTMPQSRTGSESSSPSYSPDMAGMEDQLLGTSDFTSVLDRYPPSHIPLGSNYQAHLP 509

Query: 235 EWNGVISKSDLKWLGTQDWPLKKGRNRYLVERDPIGRGRRDPCGCMDPNSVGCVQFHVSE 294
           EW G  S+S+LKWLG++ WPL+K  +RYL+ERDPIG+GR++ CGC    S+ CV+FH+SE
Sbjct: 510 EWTGEASESELKWLGSKFWPLEKPEHRYLIERDPIGKGRQESCGCQVSGSIECVRFHISE 569

Query: 295 KRHKLKLELGDAFLQWRFDKMGEEVTFAWTVDDEKKFEDIVSSNPPSLGISYWEDIIESF 354
           KR ++K ELG AF  W F++MG+EV  +WT ++EKKF+DIV SNPPSLGI++W+ I +SF
Sbjct: 570 KRLRVKRELGPAFYHWEFNQMGDEVGLSWTAEEEKKFKDIVKSNPPSLGITFWDQIFKSF 629

Query: 355 PSRSKADLVGYYYNVFLLRRRGHQNRVTPNEINSDEES-ESGTATNGFGNEVHNSSGSIF 395
           P +S+ +LV YY+NVFLL RRG+QNR TPN I+SD+E  ESG+ TNGFG+E    S SI 
Sbjct: 630 PKKSRRELVSYYFNVFLLHRRGYQNRFTPNNIDSDDEGLESGSVTNGFGDEERKPSKSIL 689

The following BLAST results are available for this feature:

BLAST of CsaV3_6G000670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138586.1	2.1e-233	100.00	PREDICTED: AT-rich interactive domain-containing protein 1-like [Cucumis sativus...	[more]
XP_008458204.1	1.6e-209	90.13	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucu...	[more]
XP_023547658.1	6.5e-198	84.30	AT-rich interactive domain-containing protein 1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022958968.1	1.4e-197	84.56	AT-rich interactive domain-containing protein 1 isoform X2 [Cucurbita moschata]	[more]
XP_022958966.1	1.4e-197	84.56	AT-rich interactive domain-containing protein 1 isoform X1 [Cucurbita moschata] ...	[more]

BLAST of CsaV3_6G000670 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46040.1	5.7e-71	46.78	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT4G11400.1	5.3e-53	34.00	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT5G04110.1	1.0e-32	37.70	DNA GYRASE B3	[more]
AT2G03470.1	2.5e-26	36.00	ELM2 domain-containing protein	[more]
AT1G13880.1	6.1e-25	34.15	ELM2 domain-containing protein	[more]

BLAST of CsaV3_6G000670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84JT7\|ARID1_ARATH	1.0e-69	46.78	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LDD4\|ARID2_ARATH	9.6e-52	34.00	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_6G000670 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KD11\|A0A0A0KD11_CUCSA	1.4e-233	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G004620 PE=4 SV=1	[more]
tr\|A0A1S3C8K0\|A0A1S3C8K0_CUCME	1.1e-209	90.13	AT-rich interactive domain-containing protein 1-like isoform X1 OS=Cucumis melo ...	[more]
tr\|A0A1S3C7F8\|A0A1S3C7F8_CUCME	1.2e-195	90.24	AT-rich interactive domain-containing protein 1-like isoform X2 OS=Cucumis melo ...	[more]
tr\|A0A251QHF6\|A0A251QHF6_PRUPE	2.1e-104	53.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G173100 PE=4 SV=1	[more]
tr\|M5X794\|M5X794_PRUPE	2.1e-104	53.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002218mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G000670.1	CsaV3_6G000670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..389
None	No IPR available	PANTHER	PTHR22970:SF23	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1	coord: 38..392
None	No IPR available	PANTHER	PTHR22970	FAMILY NOT NAMED	coord: 38..392

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G000670	CSPI06G00610	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G000670	CSPI03G08680	Wild cucumber (PI 183967)	cpicucB189
CsaV3_6G000670	Cucsa.135630	Cucumber (Gy14) v1	cgycucB203
CsaV3_6G000670	CmaCh17G004410	Cucurbita maxima (Rimu)	cmacucB0440
CsaV3_6G000670	CmaCh08G009030	Cucurbita maxima (Rimu)	cmacucB1073
CsaV3_6G000670	CmoCh17G004190	Cucurbita moschata (Rifu)	cmocucB0432
CsaV3_6G000670	CmoCh08G008740	Cucurbita moschata (Rifu)	cmocucB1055
CsaV3_6G000670	Cp4.1LG17g03690	Cucurbita pepo (Zucchini)	cpecucB0395
CsaV3_6G000670	Cp4.1LG12g03830	Cucurbita pepo (Zucchini)	cpecucB0165
CsaV3_6G000670	CsGy3G008760	Cucumber (Gy14) v2	cgybcucB152
CsaV3_6G000670	CsGy6G000660	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G000670	Carg05614	Silver-seed gourd	carcucB0081
CsaV3_6G000670	Carg13833	Silver-seed gourd	carcucB0637
CsaV3_6G000670	Cla001239	Watermelon (97103) v1	cucwmB564
CsaV3_6G000670	MELO3C006099	Melon (DHL92) v3.5.1	cucmeB511
CsaV3_6G000670	MELO3C021200	Melon (DHL92) v3.5.1	cucmeB430
CsaV3_6G000670	ClCG06G003580	Watermelon (Charleston Gray)	cucwcgB502
CsaV3_6G000670	Lsi09G015780	Bottle gourd (USVL1VR-Ls)	cuclsiB418
CsaV3_6G000670	MELO3C006099.2	Melon (DHL92) v3.6.1	cucmedB499
CsaV3_6G000670	MELO3C021200.2	Melon (DHL92) v3.6.1	cucmedB420
CsaV3_6G000670	Cla97C06G113020	Watermelon (97103) v2	cucwmbB492
CsaV3_6G000670	Bhi12G001673	Wax gourd	cucwgoB550

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_6G000670	CsaV3_3G008820	Cucumber (Chinese Long) v3	cuccucB151

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G000670	Cucurbita pepo (Zucchini)	cpecucB0242
CsaV3_6G000670	Wild cucumber (PI 183967)	cpicucB307
CsaV3_6G000670	Bottle gourd (USVL1VR-Ls)	cuclsiB429
CsaV3_6G000670	Melon (DHL92) v3.5.1	cucmeB426
CsaV3_6G000670	Melon (DHL92) v3.6.1	cucmedB417
CsaV3_6G000670	Watermelon (Charleston Gray)	cucwcgB456
CsaV3_6G000670	Watermelon (97103) v1	cucwmB529
CsaV3_6G000670	Watermelon (97103) v2	cucwmbB431
CsaV3_6G000670	Wax gourd	cucwgoB560
CsaV3_6G000670	Cucumber (Chinese Long) v3	cuccucB204
CsaV3_6G000670	Cucumber (Gy14) v2	cgybcucB243
CsaV3_6G000670	Cucumber (Gy14) v1	cgycucB471
CsaV3_6G000670	Cucurbita moschata (Rifu)	cmocucB0363