CmaCh08G009030 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G009030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Arid/bright DNA-binding domain-containing family protein
Location	Cma_Chr08 : 5592616 .. 5596487 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCAGATGAGCTCATGAATTGTGTTGGCTTTGACGAAAATTCAATTTCAGATTTTTCCAAGAGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGTTGTATTTCCTCAAAGAAGCAAGAAACTCCAGGATATTGATCATTGCACCATCAAAAATGAGGATATAAAAGTTATCGATCCACCTTCGGTCAAGGAAGCAAATTTTGTCCTGGAGAGAACGCAGAAACCGATGTTGGGATTGCTAAATTGGCTGAAAGATGTTGCAAGAAACCCTTGTGATCCATCAATATGTTCACTACCAGAAAAGTCAAAATGGAAATCACATGGAAATGAAGAGGTTTGGAAACAAGTTTTGCTAGTTCGAGAGGAATTTTTTGTAAAAAGACGAGTCGATGCAAGTAGCGAGCAATCTTTCTTGCAGGTACTTTTCATAAATTCTTAAGTTGTTTATAGTATATCTTTATCCCTATAAAGAATCAAATGCTATTTATATCTGTGCCTGTATTAAGTTCTGTGTGTTCTCGTTGTCCCATGATATATAAGTTGATTGTAGTATTTTTCGAACTGATTTCAGTATTTTATTGTTTTTCATATCATTGTTCTCTCCGTCTTGATATGATTTTCATACTATGCATTTTGATTGGTATCCCTTTACATCTTAAATAGTGTTCTGTTCCTTGTAAACTGCAAAGATTCTCATTGTGAAGGCCAATATGGAAGTAAGACATAATCTTAAAATGTATCATCGAGTTACTACAATAATTTGCTTTCATCTGATCTATAGTATCTATCTAGTTTAGTTGGTTATTTAGTATTATGAACCTTTGTATCTTTTAGGAATTTCTGTAGTGTCCTTTCTATATGTTTAATGGTTTAATGGTCTTGTGTGAATATAAAACTATAGAATCCTTCATATCAACTCAGAATATTATTTATCACCGTATGAAGGTACTATTGAGTGTTAGCTGTTATTTTGTAAAATTGATCTTGAGCTTAAATAAGTGATGAAATTGGTTCCTCCAAGTTTAATTAGAAATAATTTCACGAACCAACTAGTAAATTGTAGAAAACACCTGTAAAATACTATAAAAACTATTTATATCCAGCCATTAAAATATCAAAATCTAGCCTTAAACCTGAGCGTGGATATTAAGTCTAATATTCAACTAACATAATCAAGAAAACTACAATTCACCAAAATAGTCTCATTCAACCCTAAGGACTACGAAAGGCCAATTTGATAATTATTTAGGCCCTAGCGACTTGATTTTTTGTTTATGAAAAATAAGCGTATAAATTATATTTGTTTCTCTTTATAATCATTTGGTTCTTTGTTTTTCAAAATTGTATATTTTTTTTTCTCATCATTTCTCTACAATTGTTTTCATCTTTCTTAAAAAATGTTAGAATTTTTCAACCAAATTTTCAAACACAAACTTGTTTTTGAAAGTTAGTCTTCATGGTACTTATAGGTGTTGTAATTTTTTTAAAAAAATCTTTTAAAATTTTTTGCAATAGTATTTTGTTCTCTCCTTTTTTTTCTTTTTAATATGTTGAATGCTACTATTACAAGATTGGAAGTTTGAGGTCCTATTTGACATAAAATTTAATTTTATAACTAATGAATCAATTTATTTTCAAAAACTTTGAATATGTCATAAATATGTTAAACACAAAATTCAAAAACTTCTTTGACACAAAATTGTAGTTTCAAAGATGACATTTCTTAGACACTTTTTAAATTTTAAGAATCTTATAGGCATAAACTTGAAAATTCAAAAATTATGCTTCTAATCTTATAGACATGTACTTGTAATTTCGTAGACCTTTCGACATTGGGCAGGCGTTAGCCCCCATACCGACTTTGCGGAGACTTGTGTTTTTGGTAAACAGTCCCCGAGCTTGGTCACTGCAACCCCTTTTGTTAGGAGGCACCCTTTCTCCCAAAGTTAACGGGGCTATTTTGCCAATTTCCTTAGAGAGAATTGTCTTGCGCCCCTAGGTATTCTCTACCTTCCCACCTGTGACGGTTTCGGATACAGGTACCCTTTTGTTGAAAGTTGTTTGAGCTTTTCTTGGGAATATGACATGGGTTACTTCAGCTCCATAGCGCCTAGTAACAGTGGATTAGAGTAATGTGTTATAGTGATGTCTCGGTCGAGAATTGAGAAGAATTGAATAAGTATGGTATCTAATGATAATGATAAAGTGAGTGTGAGAACGAGTGATAATGGTTTTTTTAAAGGATAAGTTATACAAAGAAGAGGGAGGAGAGGCCTCCCTGTCTCTCAAGGACTTGTTAACCTCACAACAACATGATAAATAAACATATTACAGAAGAAAAAAGAAAGGATATATGATGAGAATTGAGAAGGGGGATGAAATTAGAGTGTAAGGGAAGCCAACTATTGGCAGGATTCGGAGTTGTAAGGCTGGGTAATTTACTATCACCGAACTTAACGTCTTTGACATAATTTATTATCAGGTTCATTTGATCTTCCCTATTTTGCAGAGAAATCAGAGGATGCATCCTTGTATGTATGATAACGATACGGTTCCAATTTACAATCTTAGGAAGAGATTAAGCATTGACAAGAAGGTTCAATCTCAAGAACCTGTCTCTAAATCAAGTGATTCTTCACCTTCAGATTCATCAGATGAGTACAAGCCCGTTCTCCTAGGGCCAGATTATCAAGCTCAGATACCAGAATGGAATGGTGTGATATCCAACAGCAATTTGAAGTGGTTGGGAACTCAAGAATGGCCTTTAAACTTAAAAAAAGGAAGTAACAGAAATCCCGTTGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGATGCTTGGACGCTGGTTCAGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCACAGACTAAAGCTAGAGTTGGGCGCTGCGTTTCTCCAATGGAGATTTGATCAGATGGGCGAAGATGTTACATTTGCTTGGAAAGTAGATGATGAGAAAAAGTTCGAGGATATAGTGACGTCGAACCCTCCATCTCTCGGCATATGTTTTTGGGATGAGATTGTTGAGTCATTCCCTTCTAGGAGCAGGGAAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTACGTCGTAGAGGACACCAAAATCGGGTTACACCGAACAAAATCGATAGTGATGATGAATCAGAATCCGGGATTACAACCAATGGATTCGGACACGAAGTGCATAACTCACCCGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAAGCTTGAGGTATCGCTTCAAAATGGATTTTGACAAGTACGTACCTATGTTGATAATGTGATTCTGATTTGGAAACAGGCATTTTTTATTTTTGATTTTTGTAAGGAAAATGTGAAAAGGAAAATTCTTGTGTGTTACATGGAAAGTTGTAATCTGTGAAAGATGGAAGGAAGTCAATGGGACGAATACGTCGTGATTTACCAACAAATTGTTATGAAAATGGGCTGTTTTCTGAGGCTCAGATGTTCGGTTTCAATTATTTGAGGGGTTGATTAATTGTTTTGGCTAGATGTTATCTCCAAGAAATGAGGAGGATCTTGGTCGTAAGGGCCTCTTAAACAAGGCAAATAGGTGTAGTTGGGAAGAGGATGCCATTCTGTTCATTACAAAGGTTTGATTCTTGTATATTTGCTCTCTCATGTTGGCTTATGAAAAACGTACAAGCATGATGCTTTAAATGATTAAAATCACCGTTTAAATTCTTTAGTGGTGGAATTTGTTTTTTTGTTTTTTTTTTGGTTATTAAGTTTGGCATAATCAACTCATTATAAACACTATTGTAATCCCTAGCTATTGTATTACGGTTTCCCTG

mRNA sequence

ATGTTGTCAGATGAGCTCATGAATTGTGTTGGCTTTGACGAAAATTCAATTTCAGATTTTTCCAAGAGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGTTGTATTTCCTCAAAGAAGCAAGAAACTCCAGGATATTGATCATTGCACCATCAAAAATGAGGATATAAAAGTTATCGATCCACCTTCGGTCAAGGAAGCAAATTTTGTCCTGGAGAGAACGCAGAAACCGATGTTGGGATTGCTAAATTGGCTGAAAGATGTTGCAAGAAACCCTTGTGATCCATCAATATGTTCACTACCAGAAAAGTCAAAATGGAAATCACATGGAAATGAAGAGGTTTGGAAACAAGTTTTGCTAGTTCGAGAGGAATTTTTTGTAAAAAGACGAGTCGATGCAAGTAGCGAGCAATCTTTCTTGCAGAGAAATCAGAGGATGCATCCTTGTATGTATGATAACGATACGGTTCCAATTTACAATCTTAGGAAGAGATTAAGCATTGACAAGAAGGTTCAATCTCAAGAACCTGTCTCTAAATCAAGTGATTCTTCACCTTCAGATTCATCAGATGAGTACAAGCCCGTTCTCCTAGGGCCAGATTATCAAGCTCAGATACCAGAATGGAATGGTGTGATATCCAACAGCAATTTGAAGTGGTTGGGAACTCAAGAATGGCCTTTAAACTTAAAAAAAGGAAGTAACAGAAATCCCGTTGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGATGCTTGGACGCTGGTTCAGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCACAGACTAAAGCTAGAGTTGGGCGCTGCGTTTCTCCAATGGAGATTTGATCAGATGGGCGAAGATGTTACATTTGCTTGGAAAGTAGATGATGAGAAAAAGTTCGAGGATATAGTGACGTCGAACCCTCCATCTCTCGGCATATGTTTTTGGGATGAGATTGTTGAGTCATTCCCTTCTAGGAGCAGGGAAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTACGTCGTAGAGGACACCAAAATCGGGTTACACCGAACAAAATCGATAGTGATGATGAATCAGAATCCGGGATTACAACCAATGGATTCGGACACGAAGTGCATAACTCACCCGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAAGCTTGAGGTATCGCTTCAAAATGGATTTTGACAAGTACGTACCTATGTTGATAATGTGATTCTGATTTGGAAACAGGCATTTTTTATTTTTGATTTTTGTAAGGAAAATGTGAAAAGGAAAATTCTTGTGTGTTACATGGAAAGTTGTAATCTGTGAAAGATGGAAGGAAGTCAATGGGACGAATACGTCGTGATTTACCAACAAATTGTTATGAAAATGGGCTGTTTTCTGAGGCTCAGATGTTCGGTTTCAATTATTTGAGGGGTTGATTAATTGTTTTGGCTAGATGTTATCTCCAAGAAATGAGGAGGATCTTGGTCGTAAGGGCCTCTTAAACAAGGCAAATAGGTGTAGTTGGGAAGAGGATGCCATTCTGTTCATTACAAAGGTTTGATTCTTGTATATTTGCTCTCTCATGTTGGCTTATGAAAAACGTACAAGCATGATGCTTTAAATGATTAAAATCACCGTTTAAATTCTTTAGTGGTGGAATTTGTTTTTTTGTTTTTTTTTTGGTTATTAAGTTTGGCATAATCAACTCATTATAAACACTATTGTAATCCCTAGCTATTGTATTACGGTTTCCCTG

Coding sequence (CDS)

ATGTTGTCAGATGAGCTCATGAATTGTGTTGGCTTTGACGAAAATTCAATTTCAGATTTTTCCAAGAGAATATTTGATATGAAGAGTGATAGGATGAAGAGTGGGGTTGTATTTCCTCAAAGAAGCAAGAAACTCCAGGATATTGATCATTGCACCATCAAAAATGAGGATATAAAAGTTATCGATCCACCTTCGGTCAAGGAAGCAAATTTTGTCCTGGAGAGAACGCAGAAACCGATGTTGGGATTGCTAAATTGGCTGAAAGATGTTGCAAGAAACCCTTGTGATCCATCAATATGTTCACTACCAGAAAAGTCAAAATGGAAATCACATGGAAATGAAGAGGTTTGGAAACAAGTTTTGCTAGTTCGAGAGGAATTTTTTGTAAAAAGACGAGTCGATGCAAGTAGCGAGCAATCTTTCTTGCAGAGAAATCAGAGGATGCATCCTTGTATGTATGATAACGATACGGTTCCAATTTACAATCTTAGGAAGAGATTAAGCATTGACAAGAAGGTTCAATCTCAAGAACCTGTCTCTAAATCAAGTGATTCTTCACCTTCAGATTCATCAGATGAGTACAAGCCCGTTCTCCTAGGGCCAGATTATCAAGCTCAGATACCAGAATGGAATGGTGTGATATCCAACAGCAATTTGAAGTGGTTGGGAACTCAAGAATGGCCTTTAAACTTAAAAAAAGGAAGTAACAGAAATCCCGTTGAAAGGGATCCCATTGGAAAAGGAAGGCGAGATCCTTGTGGATGCTTGGACGCTGGTTCAGTTGGTTGTGTCAAATTTCACGTTGCTGAGAAAAGGCACAGACTAAAGCTAGAGTTGGGCGCTGCGTTTCTCCAATGGAGATTTGATCAGATGGGCGAAGATGTTACATTTGCTTGGAAAGTAGATGATGAGAAAAAGTTCGAGGATATAGTGACGTCGAACCCTCCATCTCTCGGCATATGTTTTTGGGATGAGATTGTTGAGTCATTCCCTTCTAGGAGCAGGGAAGATCTTGTTAGCTACTACTATAATGTCTTTCTTTTACGTCGTAGAGGACACCAAAATCGGGTTACACCGAACAAAATCGATAGTGATGATGAATCAGAATCCGGGATTACAACCAATGGATTCGGACACGAAGTGCATAACTCACCCGGCTCCATTTTCTACTCTCCCAAGAAGCCACGGTAA

Protein sequence

MLSDELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVIDPPSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTNGFGHEVHNSPGSIFYSPKKPR

Homology

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BLAST of CmaCh08G009030 vs. Swiss-Prot
Match: ARID1_ARATH (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana GN=ARID1 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.2e-66
Identity = 131/294 (44.56%), Postives = 187/294 (63.61%), Query Frame = 1


Query: 74  ERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFFVKRRV 133
           +R ++  L  L WL DVA++PCDPS+  +P++S+W S+G+EE WKQ+LL R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 134 DASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDE 193
           D++ E+++ Q+ Q+MHPC+YD+     YNLR+RLS +   + +      SD   SD  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYEDYKRGK--TGNGSDIGSSDEEDR 363

Query: 194 YKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPC 253
               L+G  +QA++PEW G+   S+ KWLGT+ WPL  ++      +ERD IGKGR+DPC
Sbjct: 364 -PCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPC 423

Query: 254 GCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTS 313
           GC + GS+ CVKFH+  KR +LKLELG AF  W FD MGE     W   + KK + ++ S
Sbjct: 424 GCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLM-S 483

Query: 314 NPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDE 368
           +PPSL   F  +     PS+SR  +VSY+YNV LL+ R  Q+R+TP+ IDSD +
Sbjct: 484 SPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

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BLAST of CmaCh08G009030 vs. Swiss-Prot
Match: ARID2_ARATH (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-52
Identity = 121/354 (34.18%), Postives = 181/354 (51.13%), Query Frame = 1


Query: 69  ANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFF 128
           ++F LE+ +  + G+L WL  VA +P DP+I  +P  SKWK +   + W QV   +    
Sbjct: 212 SDFSLEK-RDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLL 271

Query: 129 VKR-RVDASSEQSFLQRNQRMH-PCMYDNDTVPIYNLR---------------------- 188
           V+R   +        + +Q +H P MY++D   I  LR                      
Sbjct: 272 VQRDNAELRYRYHPFRGHQNIHHPSMYEDDRKSIGRLRYSIRPPNLSKHCSSSCCNGSSL 331

Query: 189 -----------KRLSIDKKVQSQEPVSKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGV 248
                      ++L+I    ++      S     + +    + + +G  +QAQ+ EW   
Sbjct: 332 VSLSKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTES 391

Query: 249 ISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRH 308
             +S+ KWLGT+ WP    +  ++  +  D +GKGR D C C  +G V C + H+AEKR 
Sbjct: 392 GVDSDSKWLGTRIWPPENSEALDQT-LGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRM 451

Query: 309 RLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSR 368
            LK ELG  F  WRF+QMGE+V   W  ++EK+F+D++ ++P S    FW    ++FP +
Sbjct: 452 ELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQS----FWTNAAKNFPKK 511

Query: 369 SREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTNGFGHEVHNSPGS 388
            RE+LVSYY+NVFL+ RR +QNRVTP  IDSDDE   G     FG +   S GS
Sbjct: 512 KREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

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BLAST of CmaCh08G009030 vs. TrEMBL
Match: A0A0A0KD11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004620 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 4.9e-188
Identity = 311/397 (78.34%), Postives = 360/397 (90.68%), Query Frame = 1


Query: 1   MLSDELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKV 60
           MLSDE MNC+ FD+NSISDFSKRIFDMKSDRMKSG VFP+RSKK +DI+HC  +N D+++
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPSVKEANFVLERT-QKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQ 120
           IDPP VKE N V E++ Q+PMLGLL+WLK +ARNPCDPSI SLPEKSKWKS+GNEE+WKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPV 180
           VL+VREE F+KR+VD+SSEQSF+Q+NQ+MHPCMYD+DT PIYNLRKRLS+DKK  SQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNP 240
           SK+SDSSP+DS D+YKPV LG DYQA++PEWNGVIS S+LKWLGTQ+WPL  KKG NR  
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPL--KKGRNRYL 240

Query: 241 VERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAW 300
           VERDPIG+GRRDPCGC+D  SVGCV+FHV+EKRH+LKLELG AFLQWRFD+MGE+VTFAW
Sbjct: 241 VERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAW 300

Query: 301 KVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTP 360
            VDDEKKFEDIV+SNPPSLGI +W++I+ESFPSRS+ DLV YYYNVFLLRRRGHQNRVTP
Sbjct: 301 TVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTP 360

Query: 361 NKIDSDDESESGITTNGFGHEVHNSPGSIFYSPKKPR 397
           N+I+SD+ESESG  TNGFG+EVHNS GSIFYSPKKPR
Sbjct: 361 NEINSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

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BLAST of CmaCh08G009030 vs. TrEMBL
Match: M5X794_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002218mg PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-102
Identity = 205/418 (49.04%), Postives = 266/418 (63.64%), Query Frame = 1


Query: 4   DELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVIDP 63
           DE +  +      +S F KR    +     S     +R KK  DI      NED  ++DP
Sbjct: 287 DEAVMILDPSPGEVSSFRKR---KRGPSCGSEAGESRRGKKYNDIS-----NEDAAILDP 346

Query: 64  PSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLV 123
            + +EA    +R Q+ + G+LNW++ +A++PCDP++ SLPE+SKWKS GNEE W QVL  
Sbjct: 347 STDEEAISFWKRKQESLCGMLNWVRMIAKDPCDPAVGSLPERSKWKSFGNEENWMQVLWA 406

Query: 124 REEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQS--QEPVSK 183
           RE  FVK+  D+ +EQS  Q+NQRMHP +YD+     YNLR+RL ++KK+ S    P S+
Sbjct: 407 REAIFVKKHADSGAEQSNWQKNQRMHPSLYDDHFSSSYNLRERLRLEKKLLSGGTMPQSR 466

Query: 184 --SSDSSPSDSSD-------------------EYKP--VLLGPDYQAQIPEWNGVISNSN 243
             S  SSPS S D                    Y P  + LG +YQA +PEW G  S S 
Sbjct: 467 TGSESSSPSYSPDMAGMEDQLLGTSDFTSVLDRYPPSHIPLGSNYQAHLPEWTGEASESE 526

Query: 244 LKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLE 303
           LKWLG++ WPL  +K  +R  +ERDPIGKGR++ CGC  +GS+ CV+FH++EKR R+K E
Sbjct: 527 LKWLGSKFWPL--EKPEHRYLIERDPIGKGRQESCGCQVSGSIECVRFHISEKRLRVKRE 586

Query: 304 LGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDL 363
           LG AF  W F+QMG++V  +W  ++EKKF+DIV SNPPSLGI FWD+I +SFP +SR +L
Sbjct: 587 LGPAFYHWEFNQMGDEVGLSWTAEEEKKFKDIVKSNPPSLGITFWDQIFKSFPKKSRREL 646

Query: 364 VSYYYNVFLLRRRGHQNRVTPNKIDSDDES-ESGITTNGFGHEVHNSPGSIFYSPKKP 396
           VSYY+NVFLL RRG+QNR TPN IDSDDE  ESG  TNGFG E      SI  SP KP
Sbjct: 647 VSYYFNVFLLHRRGYQNRFTPNNIDSDDEGLESGSVTNGFGDEERKPSKSILKSPHKP 694

[Close]

BLAST of CmaCh08G009030 vs. TrEMBL
Match: A0A061DU38_THECC (ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005304 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 202/437 (46.22%), Postives = 268/437 (61.33%), Query Frame = 1


Query: 3   SDELMNCVGFDE--NSISDFSKRIFDMKS-------DRMKSGVVFPQRSKKLQDIDHCTI 62
           SD    C+  DE   S SD +K   +          D +KS ++     +   D   CT 
Sbjct: 226 SDGDKKCMDGDECEESPSDLAKSAVNSSDVEKICNEDEVKSAIM-----EDFVDCKKCTD 285

Query: 63  KNED--IKVIDPPSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSH 122
            ++D  + ++D    KE     +R ++ M G+LNW+ ++A++PCDP I SLPE+SKWKS+
Sbjct: 286 SDDDDNVVILDSNDTKEKFSSHKRKRESMWGMLNWITEIAKDPCDPVIGSLPERSKWKSY 345

Query: 123 GNEEVWKQVLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDK 182
           GNEE+WKQVLL RE  F K+   +  +QS  Q+NQ+MHPC+YD+ T   YNLR+RLS  K
Sbjct: 346 GNEELWKQVLLFREAAFHKKDDHSGVDQSSWQKNQKMHPCLYDDPTRFGYNLRERLSCPK 405

Query: 183 KVQSQEPVSKSSDSSPSDSS--------------------------------DEYKPVLL 242
           K+   + VSK  + S S SS                                D    V +
Sbjct: 406 KLLLGKMVSKGKNYSQSSSSGNHSDLDNSMVGIDKQSHGTYDSATPGSVFDYDNDMQVPI 465

Query: 243 GPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAG 302
           GP +Q ++P+W G+ S S+ KWLGT+ WP  L+K   R  +ERD IGKGR+D CGC   G
Sbjct: 466 GPYFQVEVPDWTGLASESDPKWLGTRVWP--LEKKEKRFLIERDHIGKGRQDSCGCHIQG 525

Query: 303 SVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLG 362
           S+ CVKFHVAEKR ++KLELG+AF QW+FD+MGE+V F+WK ++++KF  IV SNPP L 
Sbjct: 526 SIQCVKFHVAEKRLKVKLELGSAFNQWKFDKMGEEVAFSWKEEEQRKFSSIVKSNPPLLD 585

Query: 363 ICFWDEIVESFPS-RSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDD-ESESGITTNGF 395
            CFWDEI + F S +SRE+LV YYYNVFLL+RR +QNR+TPN I+SDD ESE+    NGF
Sbjct: 586 KCFWDEIYKYFRSKKSREELVCYYYNVFLLQRRAYQNRITPNNINSDDEESEAESGANGF 645

[Close]

BLAST of CmaCh08G009030 vs. TrEMBL
Match: A0A061DSZ0_THECC (ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 3 OS=Theobroma cacao GN=TCM_005304 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 202/437 (46.22%), Postives = 268/437 (61.33%), Query Frame = 1


Query: 3   SDELMNCVGFDE--NSISDFSKRIFDMKS-------DRMKSGVVFPQRSKKLQDIDHCTI 62
           SD    C+  DE   S SD +K   +          D +KS ++     +   D   CT 
Sbjct: 231 SDGDKKCMDGDECEESPSDLAKSAVNSSDVEKICNEDEVKSAIM-----EDFVDCKKCTD 290

Query: 63  KNED--IKVIDPPSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSH 122
            ++D  + ++D    KE     +R ++ M G+LNW+ ++A++PCDP I SLPE+SKWKS+
Sbjct: 291 SDDDDNVVILDSNDTKEKFSSHKRKRESMWGMLNWITEIAKDPCDPVIGSLPERSKWKSY 350

Query: 123 GNEEVWKQVLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDK 182
           GNEE+WKQVLL RE  F K+   +  +QS  Q+NQ+MHPC+YD+ T   YNLR+RLS  K
Sbjct: 351 GNEELWKQVLLFREAAFHKKDDHSGVDQSSWQKNQKMHPCLYDDPTRFGYNLRERLSCPK 410

Query: 183 KVQSQEPVSKSSDSSPSDSS--------------------------------DEYKPVLL 242
           K+   + VSK  + S S SS                                D    V +
Sbjct: 411 KLLLGKMVSKGKNYSQSSSSGNHSDLDNSMVGIDKQSHGTYDSATPGSVFDYDNDMQVPI 470

Query: 243 GPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAG 302
           GP +Q ++P+W G+ S S+ KWLGT+ WP  L+K   R  +ERD IGKGR+D CGC   G
Sbjct: 471 GPYFQVEVPDWTGLASESDPKWLGTRVWP--LEKKEKRFLIERDHIGKGRQDSCGCHIQG 530

Query: 303 SVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLG 362
           S+ CVKFHVAEKR ++KLELG+AF QW+FD+MGE+V F+WK ++++KF  IV SNPP L 
Sbjct: 531 SIQCVKFHVAEKRLKVKLELGSAFNQWKFDKMGEEVAFSWKEEEQRKFSSIVKSNPPLLD 590

Query: 363 ICFWDEIVESFPS-RSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDD-ESESGITTNGF 395
            CFWDEI + F S +SRE+LV YYYNVFLL+RR +QNR+TPN I+SDD ESE+    NGF
Sbjct: 591 KCFWDEIYKYFRSKKSREELVCYYYNVFLLQRRAYQNRITPNNINSDDEESEAESGANGF 650

[Close]

BLAST of CmaCh08G009030 vs. TrEMBL
Match: A0A067K8K6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14376 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.3e-94
Identity = 198/423 (46.81%), Postives = 257/423 (60.76%), Query Frame = 1


Query: 3   SDELMNCVGFDENSISDF-SKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVI 62
           SD    C    EN  S+  S   FD   D +KS VV  +  KK ++ D       D+ V+
Sbjct: 236 SDGDKKCKDDQENLRSNLTSLNAFD--EDEVKSMVVEIEDDKKCENGDE-----NDVIVL 295

Query: 63  DPPSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVL 122
           D  +VK++   L+R +K +  +LNW+  VARNPCDP + SLPE SKW S+GNEE+WKQVL
Sbjct: 296 DSDAVKDSFSCLKRKRKSVCRVLNWITGVARNPCDPLVDSLPESSKWGSYGNEELWKQVL 355

Query: 123 LVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKV-------- 182
           L RE  F+K  VD+ +E    Q+N++MHPCMYD+     YN R+RL   KK+        
Sbjct: 356 LAREALFLKGNVDSGAE----QKNRKMHPCMYDDPVGSAYNFRERLKCTKKLLHGKTASQ 415

Query: 183 -QSQEPVSKSSDSSPSD----------SSDEY--------KPVLLGPDYQAQIPEWNGVI 242
            ++   +S S+  + SD          SS +Y        KP+ LGPD+QA++PEW G++
Sbjct: 416 GEACSQLSSSTAETESDSCTKKICDGHSSTKYSVIDIPVEKPIPLGPDFQAEVPEWTGMV 475

Query: 243 SNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHR 302
           S S+ KW+GT+ WP   +K  NR  +ER+PIGKGR+D CGC    S  CV+FH  EKR R
Sbjct: 476 SQSDSKWVGTRVWP--PEKIDNRLVIEREPIGKGRQDSCGCEVPKSTECVRFHSTEKRMR 535

Query: 303 LKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRS 362
            + ELG AFL W+FD+MGEDV  +W  ++EKKF+ IV  NPPSL  CFWDE+ + FP+R 
Sbjct: 536 TRRELGIAFLHWKFDKMGEDVKLSWTEEEEKKFKAIVRLNPPSLDKCFWDEMFKFFPTRR 595

Query: 363 REDLVSYYYNVFLLRRRGHQNRVTPNKIDS-DDESESGITTNGFGHEVHNSPGSIFYSPK 397
           REDL           RR HQNR TPN IDS DDESE G+  N  GHE   SPGS+ YS K
Sbjct: 596 REDL-----------RRAHQNRFTPNNIDSDDDESECGLIANSSGHEAPKSPGSLLYSAK 634

[Close]

BLAST of CmaCh08G009030 vs. TAIR10
Match: AT2G46040.1 (AT2G46040.1 ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.9e-67
Identity = 131/294 (44.56%), Postives = 187/294 (63.61%), Query Frame = 1


Query: 74  ERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFFVKRRV 133
           +R ++  L  L WL DVA++PCDPS+  +P++S+W S+G+EE WKQ+LL R     +   
Sbjct: 244 KRKRECPLETLKWLSDVAKDPCDPSLGIVPDRSEWVSYGSEEPWKQLLLFRAS---RTNN 303

Query: 134 DASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDE 193
           D++ E+++ Q+ Q+MHPC+YD+     YNLR+RLS +   + +      SD   SD  D 
Sbjct: 304 DSACEKTW-QKVQKMHPCLYDDSAGASYNLRERLSYEDYKRGK--TGNGSDIGSSDEEDR 363

Query: 194 YKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPC 253
               L+G  +QA++PEW G+   S+ KWLGT+ WPL  ++      +ERD IGKGR+DPC
Sbjct: 364 -PCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGRQDPC 423

Query: 254 GCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTS 313
           GC + GS+ CVKFH+  KR +LKLELG AF  W FD MGE     W   + KK + ++ S
Sbjct: 424 GCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTLQYWTDLELKKIKSLM-S 483

Query: 314 NPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDE 368
           +PPSL   F  +     PS+SR  +VSY+YNV LL+ R  Q+R+TP+ IDSD +
Sbjct: 484 SPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSRITPHDIDSDTD 529

[Close]

BLAST of CmaCh08G009030 vs. TAIR10
Match: AT4G11400.1 (AT4G11400.1 ARID/BRIGHT DNA-binding domain;ELM2 domain protein)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-53
Identity = 121/354 (34.18%), Postives = 181/354 (51.13%), Query Frame = 1


Query: 69  ANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFF 128
           ++F LE+ +  + G+L WL  VA +P DP+I  +P  SKWK +   + W QV   +    
Sbjct: 212 SDFSLEK-RDDLPGMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKCWLQVARAKNSLL 271

Query: 129 VKR-RVDASSEQSFLQRNQRMH-PCMYDNDTVPIYNLR---------------------- 188
           V+R   +        + +Q +H P MY++D   I  LR                      
Sbjct: 272 VQRDNAELRYRYHPFRGHQNIHHPSMYEDDRKSIGRLRYSIRPPNLSKHCSSSCCNGSSL 331

Query: 189 -----------KRLSIDKKVQSQEPVSKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGV 248
                      ++L+I    ++      S     + +    + + +G  +QAQ+ EW   
Sbjct: 332 VSLSKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWTES 391

Query: 249 ISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRH 308
             +S+ KWLGT+ WP    +  ++  +  D +GKGR D C C  +G V C + H+AEKR 
Sbjct: 392 GVDSDSKWLGTRIWPPENSEALDQT-LGNDLVGKGRPDSCSCELSGFVECTRLHIAEKRM 451

Query: 309 RLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSR 368
            LK ELG  F  WRF+QMGE+V   W  ++EK+F+D++ ++P S    FW    ++FP +
Sbjct: 452 ELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIADPQS----FWTNAAKNFPKK 511

Query: 369 SREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTNGFGHEVHNSPGS 388
            RE+LVSYY+NVFL+ RR +QNRVTP  IDSDDE   G     FG +   S GS
Sbjct: 512 KREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEGAFGSVGGSFGRDAVTSSGS 559

[Close]

BLAST of CmaCh08G009030 vs. TAIR10
Match: AT5G04110.1 (AT5G04110.1 DNA GYRASE B3)

HSP 1 Score: 139.0 bits (349), Expect = 6.1e-33
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 1


Query: 180 SKSSDSSPSDSSDEYKPVL-LGPDYQAQIPEW---------NGVISNSN-LKWLGTQEWP 239
           +K+S    +  S++ +P + +GP +QA+IP W          G   +SN L+WLGT  WP
Sbjct: 343 NKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLGTGVWP 402

Query: 240 L-NLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWR 299
             +LKK      V    +G+GR D C C    S  C+K H  E +  L+ E+  AF  W 
Sbjct: 403 TYSLKK-----TVHSKKVGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFSTWE 462

Query: 300 FDQMGEDVTF-AWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVF 359
           FDQMGE++   +W   +E++FE +V  NP S    FW+    +FP +S++DL+SYYYNVF
Sbjct: 463 FDQMGEEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYNVF 522

Query: 360 LLRRRGHQNRVTPNKIDSDDE 368
           L++R         N IDSDD+
Sbjct: 523 LIKRMRLLKSSAANNIDSDDD 538

[Close]

BLAST of CmaCh08G009030 vs. TAIR10
Match: AT2G03470.1 (AT2G03470.1 ELM2 domain-containing protein)

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-27
Identity = 76/214 (35.51%), Postives = 112/214 (52.34%), Query Frame = 1


Query: 175 SQEPVSKSSDSSPSDSSDEY------------------KPVLLGPDYQAQIPEW--NGVI 234
           SQ  V+  SD S   S  ++                  K VL+G ++QA IPE+    ++
Sbjct: 83  SQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEIL 142

Query: 235 SNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHR 294
             S  +     E  L  K     +  +    G+GR++ C CLD GS+ CV+ H+ E R  
Sbjct: 143 DQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKE-CLCLDKGSIRCVRRHIIEARES 202

Query: 295 LKLELG-AAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSR 354
           L   +G   F++    +MGE+V   W  ++E  F  +V SNP S G  FW ++  +FPSR
Sbjct: 203 LVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSR 262

Query: 355 SREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDE 368
           + ++LVSYY+NVF+LRRRG QNR     +DSDD+
Sbjct: 263 TMKELVSYYFNVFILRRRGIQNRFKALDVDSDDD 295

[Close]

BLAST of CmaCh08G009030 vs. TAIR10
Match: AT1G13880.1 (AT1G13880.1 ELM2 domain-containing protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.8e-25
Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = 1


Query: 195 KPVLLGPDYQAQIPEWNGVISNSNL-KWLGTQEWPLNLKKGSNRNPVERD--PIGKGRRD 254
           K V +G DYQA IPE     +N    + +G  E  +  K        E +   IGKGR++
Sbjct: 126 KTVPIGSDYQADIPECVKEEANDQSGQGVGYDEEQVTGKCVIPMPDCETEVCKIGKGRKE 185

Query: 255 PCGCLDAGSVGCVKFHVAEKRHRLKLELGA-AFLQWRFDQMGEDVTFAWKVDDEKKFEDI 314
            C CLD GS+ CV+ H+ E R  L   +G    L     +MGE+V      D+E  F +I
Sbjct: 186 -CICLDKGSIRCVQQHIMENREDLFATIGYDRCLDIGLCEMGEEVAARLTEDEEDLFHEI 245

Query: 315 VTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDE 368
           V SNP S+   FW  +  +FPSR+ +++VSYY+NVF+LRRR  QNR     +DSDD+
Sbjct: 246 VYSNPVSMDRDFWKHLKSAFPSRTMKEIVSYYFNVFILRRRAIQNRSKSLDVDSDDD 301

[Close]

BLAST of CmaCh08G009030 vs. NCBI nr
Match: gi|449441632|ref|XP_004138586.1| (PREDICTED: AT-rich interactive domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 665.2 bits (1715), Expect = 7.0e-188
Identity = 311/397 (78.34%), Postives = 360/397 (90.68%), Query Frame = 1


Query: 1   MLSDELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKV 60
           MLSDE MNC+ FD+NSISDFSKRIFDMKSDRMKSG VFP+RSKK +DI+HC  +N D+++
Sbjct: 1   MLSDEFMNCIAFDDNSISDFSKRIFDMKSDRMKSGDVFPRRSKKFKDIEHCNTENGDVQI 60

Query: 61  IDPPSVKEANFVLERT-QKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQ 120
           IDPP VKE N V E++ Q+PMLGLL+WLK +ARNPCDPSI SLPEKSKWKS+GNEE+WKQ
Sbjct: 61  IDPPFVKETNVVQEKSKQEPMLGLLDWLKGIARNPCDPSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPV 180
           VL+VREE F+KR+VD+SSEQSF+Q+NQ+MHPCMYD+DT PIYNLRKRLS+DKK  SQEPV
Sbjct: 121 VLVVREEMFLKRQVDSSSEQSFMQKNQKMHPCMYDDDTAPIYNLRKRLSLDKKDLSQEPV 180

Query: 181 SKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNP 240
           SK+SDSSP+DS D+YKPV LG DYQA++PEWNGVIS S+LKWLGTQ+WPL  KKG NR  
Sbjct: 181 SKASDSSPTDSLDDYKPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPL--KKGRNRYL 240

Query: 241 VERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAW 300
           VERDPIG+GRRDPCGC+D  SVGCV+FHV+EKRH+LKLELG AFLQWRFD+MGE+VTFAW
Sbjct: 241 VERDPIGRGRRDPCGCMDPNSVGCVQFHVSEKRHKLKLELGDAFLQWRFDKMGEEVTFAW 300

Query: 301 KVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTP 360
            VDDEKKFEDIV+SNPPSLGI +W++I+ESFPSRS+ DLV YYYNVFLLRRRGHQNRVTP
Sbjct: 301 TVDDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVGYYYNVFLLRRRGHQNRVTP 360

Query: 361 NKIDSDDESESGITTNGFGHEVHNSPGSIFYSPKKPR 397
           N+I+SD+ESESG  TNGFG+EVHNS GSIFYSPKKPR
Sbjct: 361 NEINSDEESESGTATNGFGNEVHNSSGSIFYSPKKPR 395

[Close]

BLAST of CmaCh08G009030 vs. NCBI nr
Match: gi|659116683|ref|XP_008458203.1| (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 656.4 bits (1692), Expect = 3.2e-185
Identity = 313/397 (78.84%), Postives = 358/397 (90.18%), Query Frame = 1


Query: 1   MLSDELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKV 60
           MLSDE MNCV FDENSISDFSKRI DMKSDRMK+G  FP+RSKKL+DI H  I+NED+++
Sbjct: 1   MLSDEFMNCVAFDENSISDFSKRILDMKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQI 60

Query: 61  IDPPSVKEANFVLERT-QKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQ 120
           IDPP +KE N V E++ Q+PMLGLL+WLK +ARNPCD SI SLPEKSKWKS+GNEE+WKQ
Sbjct: 61  IDPPLIKETNVVQEKSKQEPMLGLLDWLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQ 120

Query: 121 VLLVREEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPV 180
           VL+VREE FVKR+VD+SSEQS +QRNQRMHPCMYD+DTVPIYNLRKRLS+DKK  SQEPV
Sbjct: 121 VLVVREEMFVKRQVDSSSEQSSVQRNQRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPV 180

Query: 181 SKSSDSSPSDSSDEYKPVLLGPDYQAQIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNP 240
           SK++DSSP+DS D+YKPVLLG DYQA++PEWNGVIS S+LKWLGTQ+WPL  KKG NR  
Sbjct: 181 SKANDSSPTDSLDDYKPVLLGSDYQARVPEWNGVISESDLKWLGTQDWPL--KKGRNRYL 240

Query: 241 VERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAW 300
           VERDPIGKGRRDPCGC+DA SVGCV+FHV+EKR RLKLELG AFL+WRFD+MGEDVT AW
Sbjct: 241 VERDPIGKGRRDPCGCMDANSVGCVQFHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAW 300

Query: 301 KVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTP 360
            V+DEKKFEDIV+SNPPSLGI +W++I+ESFPSRS+ DLVSYYYNVFLLRRRGHQNRVTP
Sbjct: 301 TVEDEKKFEDIVSSNPPSLGISYWEDIIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTP 360

Query: 361 NKIDSDDESESGITTNGFGHEVHNSPGSIFYSPKKPR 397
           ++IDSD+ESESG  T  FG+EVHNSPGSIFYSPKKPR
Sbjct: 361 DEIDSDEESESGTATIRFGNEVHNSPGSIFYSPKKPR 395

[Close]

BLAST of CmaCh08G009030 vs. NCBI nr
Match: gi|659116689|ref|XP_008458206.1| (PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 610.9 bits (1574), Expect = 1.6e-171
Identity = 290/371 (78.17%), Postives = 335/371 (90.30%), Query Frame = 1


Query: 27  MKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVIDPPSVKEANFVLERT-QKPMLGLLN 86
           MKSDRMK+G  FP+RSKKL+DI H  I+NED+++IDPP +KE N V E++ Q+PMLGLL+
Sbjct: 1   MKSDRMKTGDAFPRRSKKLKDIAHRNIENEDVQIIDPPLIKETNVVQEKSKQEPMLGLLD 60

Query: 87  WLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLVREEFFVKRRVDASSEQSFLQRN 146
           WLK +ARNPCD SI SLPEKSKWKS+GNEE+WKQVL+VREE FVKR+VD+SSEQS +QRN
Sbjct: 61  WLKVIARNPCDSSISSLPEKSKWKSYGNEEIWKQVLVVREEMFVKRQVDSSSEQSSVQRN 120

Query: 147 QRMHPCMYDNDTVPIYNLRKRLSIDKKVQSQEPVSKSSDSSPSDSSDEYKPVLLGPDYQA 206
           QRMHPCMYD+DTVPIYNLRKRLS+DKK  SQEPVSK++DSSP+DS D+YKPVLLG DYQA
Sbjct: 121 QRMHPCMYDDDTVPIYNLRKRLSLDKKDVSQEPVSKANDSSPTDSLDDYKPVLLGSDYQA 180

Query: 207 QIPEWNGVISNSNLKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVK 266
           ++PEWNGVIS S+LKWLGTQ+WPL  KKG NR  VERDPIGKGRRDPCGC+DA SVGCV+
Sbjct: 181 RVPEWNGVISESDLKWLGTQDWPL--KKGRNRYLVERDPIGKGRRDPCGCMDANSVGCVQ 240

Query: 267 FHVAEKRHRLKLELGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDE 326
           FHV+EKR RLKLELG AFL+WRFD+MGEDVT AW V+DEKKFEDIV+SNPPSLGI +W++
Sbjct: 241 FHVSEKRQRLKLELGDAFLRWRFDEMGEDVTLAWTVEDEKKFEDIVSSNPPSLGISYWED 300

Query: 327 IVESFPSRSREDLVSYYYNVFLLRRRGHQNRVTPNKIDSDDESESGITTNGFGHEVHNSP 386
           I+ESFPSRS+ DLVSYYYNVFLLRRRGHQNRVTP++IDSD+ESESG  T  FG+EVHNSP
Sbjct: 301 IIESFPSRSKADLVSYYYNVFLLRRRGHQNRVTPDEIDSDEESESGTATIRFGNEVHNSP 360

Query: 387 GSIFYSPKKPR 397
           GSIFYSPKKPR
Sbjct: 361 GSIFYSPKKPR 369

[Close]

BLAST of CmaCh08G009030 vs. NCBI nr
Match: gi|645254404|ref|XP_008233024.1| (PREDICTED: AT-rich interactive domain-containing protein 1 isoform X1 [Prunus mume])

HSP 1 Score: 389.4 bits (999), Expect = 7.4e-105
Identity = 209/418 (50.00%), Postives = 269/418 (64.35%), Query Frame = 1


Query: 4   DELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVIDP 63
           DE +  +      +S F KR    +     S V   +R KK  DI      NED  ++DP
Sbjct: 306 DEAVIFLDPSPGEVSSFRKR---KRGPSCGSEVGESRRGKKYNDIS-----NEDAVILDP 365

Query: 64  PSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLV 123
            + +EAN   +R Q+ + G+LNW++ +A++PCDP++ SLPE+SKWKS GNEE W QVL  
Sbjct: 366 STDEEANSFWKRKQESLCGMLNWVRVIAKDPCDPAVGSLPERSKWKSFGNEENWMQVLCA 425

Query: 124 REEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQS--QEPVSK 183
           RE  FVK+  D+ +EQS  Q+NQRMHP +YD+     YNLR+RL ++KK+ S    P S+
Sbjct: 426 REAIFVKKHADSGAEQSNWQKNQRMHPSLYDDHFSSSYNLRERLRLEKKLLSGGTMPQSR 485

Query: 184 --SSDSSPSDSSD-------------------EYKP--VLLGPDYQAQIPEWNGVISNSN 243
             S  SSPS S D                    Y P  + LG +YQA +PEW G  S S 
Sbjct: 486 TGSESSSPSYSPDMAGMEDQLLGTSDFTGVLDRYPPSHIPLGSNYQAHLPEWTGEASESE 545

Query: 244 LKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLE 303
           LKWLG++ WPL  +K  +R  +ERDPIGKGR++ CGC  +GS+ CV+FH++EKR R+KLE
Sbjct: 546 LKWLGSRFWPL--EKPEHRYLIERDPIGKGRQESCGCQVSGSIECVRFHISEKRLRVKLE 605

Query: 304 LGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDL 363
           LG AF  W F+QMGE+V  +W  ++EKKF+DIV SNPPSLGI FWD+I +SFP +SR +L
Sbjct: 606 LGPAFYHWEFNQMGEEVGLSWTAEEEKKFKDIVKSNPPSLGITFWDQIFKSFPKKSRREL 665

Query: 364 VSYYYNVFLLRRRGHQNRVTPNKIDSDDES-ESGITTNGFGHEVHNSPGSIFYSPKKP 396
           VSYY+NVFLL RRG+QNR TPN IDSDDE  ESG  TNGFG E      SI  SP KP
Sbjct: 666 VSYYFNVFLLHRRGYQNRFTPNNIDSDDEGLESGSVTNGFGDEERKPSKSILKSPHKP 713

[Close]

BLAST of CmaCh08G009030 vs. NCBI nr
Match: gi|645254407|ref|XP_008233025.1| (PREDICTED: AT-rich interactive domain-containing protein 1 isoform X2 [Prunus mume])

HSP 1 Score: 389.4 bits (999), Expect = 7.4e-105
Identity = 209/418 (50.00%), Postives = 269/418 (64.35%), Query Frame = 1


Query: 4   DELMNCVGFDENSISDFSKRIFDMKSDRMKSGVVFPQRSKKLQDIDHCTIKNEDIKVIDP 63
           DE +  +      +S F KR    +     S V   +R KK  DI      NED  ++DP
Sbjct: 282 DEAVIFLDPSPGEVSSFRKR---KRGPSCGSEVGESRRGKKYNDIS-----NEDAVILDP 341

Query: 64  PSVKEANFVLERTQKPMLGLLNWLKDVARNPCDPSICSLPEKSKWKSHGNEEVWKQVLLV 123
            + +EAN   +R Q+ + G+LNW++ +A++PCDP++ SLPE+SKWKS GNEE W QVL  
Sbjct: 342 STDEEANSFWKRKQESLCGMLNWVRVIAKDPCDPAVGSLPERSKWKSFGNEENWMQVLCA 401

Query: 124 REEFFVKRRVDASSEQSFLQRNQRMHPCMYDNDTVPIYNLRKRLSIDKKVQS--QEPVSK 183
           RE  FVK+  D+ +EQS  Q+NQRMHP +YD+     YNLR+RL ++KK+ S    P S+
Sbjct: 402 REAIFVKKHADSGAEQSNWQKNQRMHPSLYDDHFSSSYNLRERLRLEKKLLSGGTMPQSR 461

Query: 184 --SSDSSPSDSSD-------------------EYKP--VLLGPDYQAQIPEWNGVISNSN 243
             S  SSPS S D                    Y P  + LG +YQA +PEW G  S S 
Sbjct: 462 TGSESSSPSYSPDMAGMEDQLLGTSDFTGVLDRYPPSHIPLGSNYQAHLPEWTGEASESE 521

Query: 244 LKWLGTQEWPLNLKKGSNRNPVERDPIGKGRRDPCGCLDAGSVGCVKFHVAEKRHRLKLE 303
           LKWLG++ WPL  +K  +R  +ERDPIGKGR++ CGC  +GS+ CV+FH++EKR R+KLE
Sbjct: 522 LKWLGSRFWPL--EKPEHRYLIERDPIGKGRQESCGCQVSGSIECVRFHISEKRLRVKLE 581

Query: 304 LGAAFLQWRFDQMGEDVTFAWKVDDEKKFEDIVTSNPPSLGICFWDEIVESFPSRSREDL 363
           LG AF  W F+QMGE+V  +W  ++EKKF+DIV SNPPSLGI FWD+I +SFP +SR +L
Sbjct: 582 LGPAFYHWEFNQMGEEVGLSWTAEEEKKFKDIVKSNPPSLGITFWDQIFKSFPKKSRREL 641

Query: 364 VSYYYNVFLLRRRGHQNRVTPNKIDSDDES-ESGITTNGFGHEVHNSPGSIFYSPKKP 396
           VSYY+NVFLL RRG+QNR TPN IDSDDE  ESG  TNGFG E      SI  SP KP
Sbjct: 642 VSYYFNVFLLHRRGYQNRFTPNNIDSDDEGLESGSVTNGFGDEERKPSKSILKSPHKP 689

The following BLAST results are available for this feature:

BLAST of CmaCh08G009030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARID1_ARATH	5.2e-66	44.56	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana GN=ARID1...	[more]
ARID2_ARATH	4.2e-52	34.18	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2...	[more]

BLAST of CmaCh08G009030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD11_CUCSA	4.9e-188	78.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G004620 PE=4 SV=1	[more]
M5X794_PRUPE	1.1e-102	49.04	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002218mg PE=4 SV=1	[more]
A0A061DU38_THECC	1.5e-96	46.22	ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 1 OS=Theobr...	[more]
A0A061DSZ0_THECC	1.5e-96	46.22	ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 3 OS=Theobr...	[more]
A0A067K8K6_JATCU	5.3e-94	46.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14376 PE=4 SV=1	[more]

BLAST of CmaCh08G009030 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46040.1	2.9e-67	44.56	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT4G11400.1	2.4e-53	34.18	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	[more]
AT5G04110.1	6.1e-33	38.31	DNA GYRASE B3	[more]
AT2G03470.1	3.8e-27	35.51	ELM2 domain-containing protein	[more]
AT1G13880.1	2.8e-25	40.11	ELM2 domain-containing protein	[more]

BLAST of CmaCh08G009030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441632\|ref\|XP_004138586.1\|	7.0e-188	78.34	PREDICTED: AT-rich interactive domain-containing protein 1-like [Cucumis sativus...	[more]
gi\|659116683\|ref\|XP_008458203.1\|	3.2e-185	78.84	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cucu...	[more]
gi\|659116689\|ref\|XP_008458206.1\|	1.6e-171	78.17	PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X2 [Cucu...	[more]
gi\|645254404\|ref\|XP_008233024.1\|	7.4e-105	50.00	PREDICTED: AT-rich interactive domain-containing protein 1 isoform X1 [Prunus mu...	[more]
gi\|645254407\|ref\|XP_008233025.1\|	7.4e-105	50.00	PREDICTED: AT-rich interactive domain-containing protein 1 isoform X2 [Prunus mu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G009030.1	CmaCh08G009030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22970	FAMILY NOT NAMED	coord: 55..396 score: 9.3E
None	No IPR available	PANTHER	PTHR22970:SF23	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1	coord: 55..396 score: 9.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G009030	Cucsa.135630	Cucumber (Gy14) v1	cgycmaB0380
CmaCh08G009030	Cla001239	Watermelon (97103) v1	cmawmB882
CmaCh08G009030	Csa6G004620	Cucumber (Chinese Long) v2	cmacuB905
CmaCh08G009030	MELO3C021200	Melon (DHL92) v3.5.1	cmameB821
CmaCh08G009030	ClCG06G003580	Watermelon (Charleston Gray)	cmawcgB800
CmaCh08G009030	CSPI06G00610	Wild cucumber (PI 183967)	cmacpiB925
CmaCh08G009030	CmoCh17G004190	Cucurbita moschata (Rifu)	cmacmoB898
CmaCh08G009030	CmoCh08G008740	Cucurbita moschata (Rifu)	cmacmoB912
CmaCh08G009030	Lsi05G020490	Bottle gourd (USVL1VR-Ls)	cmalsiB842
CmaCh08G009030	Lsi09G015780	Bottle gourd (USVL1VR-Ls)	cmalsiB817
CmaCh08G009030	Cp4.1LG17g03690	Cucurbita pepo (Zucchini)	cmacpeB916
CmaCh08G009030	Cp4.1LG12g03830	Cucurbita pepo (Zucchini)	cmacpeB904
CmaCh08G009030	MELO3C021200.2	Melon (DHL92) v3.6.1	cmamedB919
CmaCh08G009030	MELO3C006099.2	Melon (DHL92) v3.6.1	cmamedB952
CmaCh08G009030	CsaV3_3G008820	Cucumber (Chinese Long) v3	cmacucB1055
CmaCh08G009030	CsaV3_6G000670	Cucumber (Chinese Long) v3	cmacucB1073
CmaCh08G009030	Cla97C06G113020	Watermelon (97103) v2	cmawmbB917
CmaCh08G009030	Bhi12G001673	Wax gourd	cmawgoB1100
CmaCh08G009030	CsGy6G000660	Cucumber (Gy14) v2	cgybcmaB873
CmaCh08G009030	CsGy3G008760	Cucumber (Gy14) v2	cgybcmaB458
CmaCh08G009030	Carg13833	Silver-seed gourd	carcmaB0842
CmaCh08G009030	Carg05614	Silver-seed gourd	carcmaB0097

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G009030	CmaCh17G004410	Cucurbita maxima (Rimu)	cmacmaB385

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G009030	Cucumber (Chinese Long) v3	cmacucB1064
CmaCh08G009030	Cucurbita maxima (Rimu)	cmacmaB359
CmaCh08G009030	Cucurbita moschata (Rifu)	cmacmoB886
CmaCh08G009030	Bottle gourd (USVL1VR-Ls)	cmalsiB836
CmaCh08G009030	Cucumber (Gy14) v2	cgybcmaB463