CsaV3_5G038350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G038350
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPrefoldin subunit 2
Locationchr5 : 30412087 .. 30412533 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

mRNA sequence

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

Coding sequence (CDS)

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

Protein sequence

MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGAAQGVLVGPAGES
Homology
[Close]
BLAST of CsaV3_5G038350 vs. NCBI nr
Match: XP_004141456.1 (PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetical protein Csa_5G638310 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 2.5e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of CsaV3_5G038350 vs. NCBI nr
Match: XP_022956082.1 (probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefoldin subunit 2 [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 3.7e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]
BLAST of CsaV3_5G038350 vs. NCBI nr
Match: XP_022979430.1 (probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefoldin subunit 2 [Cucurbita maxima])

HSP 1 Score: 270.4 bits (690), Expect = 3.7e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

[Close]
BLAST of CsaV3_5G038350 vs. NCBI nr
Match: XP_022934448.1 (probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_023540953.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023540954.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 143/148 (96.62%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]
BLAST of CsaV3_5G038350 vs. NCBI nr
Match: XP_023528202.1 (probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]
BLAST of CsaV3_5G038350 vs. TAIR10
Match: AT3G22480.2 (prefoldin 2)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-44
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0 

Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match: sp|Q9LJ98|PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.3e-43
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0 

Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match: sp|A1A4P5|PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.9e-23
Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 0 

Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match: sp|Q9UHV9|PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.9e-23
Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 0 

Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match: sp|B0BN18|PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0 

Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L++ L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match: sp|O70591|PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pfdn2 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0 

Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L++ L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match: tr|A0A0A0KVR4|A0A0A0KVR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.7e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match: tr|A0A1S3C9H2|A0A1S3C9H2_CUCME (probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-68
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match: tr|A0A2P5FWI4|A0A2P5FWI4_9ROSA (Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.9e-59
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEME SEHSLVI+A++PLDPSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAVQPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DG   +++SGRKEG AQGVLVGPAG S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

[Close]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match: tr|A0A2P5E3G8|A0A2P5E3G8_PARAD (Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.6e-59
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEME SEHSLVI+AI+PL+PSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAIQPLEPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DG   +++SGRKEG AQGVLVGPAG S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

[Close]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match: tr|A0A2P4MN98|A0A2P4MN98_QUESU (Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.6e-57
Identity = 121/148 (81.76%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS +E E++EP+NEQ VAN Y ++R+ELNQIYSKITELEME  EHSLVI+AI+PLDP+R
Sbjct: 35  MASRAEDEQREPINEQAVANKYASMRTELNQIYSKITELEMEVGEHSLVINAIQPLDPTR 94

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RC+RMIGGVLVERTI+EVLPAVQRNKEGLEEVI+RLNEALEKKKKEISD EAKYKIRIRK
Sbjct: 95  RCFRMIGGVLVERTIQEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDFEAKYKIRIRK 154

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGE K +D GRKEG+AQGVLVGPAG S
Sbjct: 155 PDGETK-DDGGRKEGSAQGVLVGPAGGS 181

The following BLAST results are available for this feature:
BLAST of CsaV3_5G038350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141456.12.5e-70100.00PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetic... [more]
XP_022956082.13.7e-6998.65probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefo... [more]
XP_022979430.13.7e-6998.65probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefold... [more]
XP_022934448.11.1e-6896.62probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 pro... [more]
XP_023528202.11.1e-6897.97probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probab... [more]
BLAST of CsaV3_5G038350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22480.21.3e-4467.79prefoldin 2[more]
BLAST of CsaV3_5G038350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LJ98|PFD2_ARATH2.3e-4367.79Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 S... [more]
sp|A1A4P5|PFD2_BOVIN7.9e-2343.75Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1[more]
sp|Q9UHV9|PFD2_HUMAN7.9e-2343.75Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1[more]
sp|B0BN18|PFD2_RAT2.3e-2243.06Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1[more]
sp|O70591|PFD2_MOUSE3.0e-2243.06Prefoldin subunit 2 OS=Mus musculus OX=10090 GN=Pfdn2 PE=1 SV=2[more]
BLAST of CsaV3_5G038350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KVR4|A0A0A0KVR4_CUCSA1.7e-70100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1[more]
tr|A0A1S3C9H2|A0A1S3C9H2_CUCME2.0e-6897.97probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1[more]
tr|A0A2P5FWI4|A0A2P5FWI4_9ROSA3.9e-5984.46Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1[more]
tr|A0A2P5E3G8|A0A2P5E3G8_PARAD8.6e-5984.46Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=... [more]
tr|A0A2P4MN98|A0A2P4MN98_QUESU3.6e-5781.76Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: INTERPRO
TermDefinition
IPR027235PFD2
IPR009053Prefoldin
IPR002777PFD_beta-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G038350.1CsaV3_5G038350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableCOILSCoilCoilcoord: 79..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..134
NoneNo IPR availableSUPERFAMILYSSF46579Prefoldincoord: 19..117
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 16..118
e-value: 9.9E-26
score: 89.7
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 12..122
e-value: 1.4E-25
score: 91.3
IPR027235Prefoldin subunit 2PANTHERPTHR13303PREFOLDIN SUBUNIT 2coord: 8..143

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G038350CSPI05G29210Wild cucumber (PI 183967)cpicucB284
CsaV3_5G038350CsGy5G028610Cucumber (Gy14) v2cgybcucB232
CsaV3_5G038350MELO3C022016Melon (DHL92) v3.5.1cucmeB358
CsaV3_5G038350MELO3C022017.2Melon (DHL92) v3.6.1cucmedB350
CsaV3_5G038350Bhi06G000296Wax gourdcucwgoB482
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G038350Wax gourdcucwgoB445
CsaV3_5G038350Wax gourdcucwgoB511
CsaV3_5G038350Cucumber (Chinese Long) v3cuccucB037
CsaV3_5G038350Cucumber (Chinese Long) v3cuccucB126
CsaV3_5G038350Silver-seed gourdcarcucB0296
CsaV3_5G038350Silver-seed gourdcarcucB0725
CsaV3_5G038350Cucumber (Gy14) v2cgybcucB041
CsaV3_5G038350Cucumber (Gy14) v1cgycucB149
CsaV3_5G038350Cucumber (Gy14) v1cgycucB244
CsaV3_5G038350Cucumber (Gy14) v1cgycucB525
CsaV3_5G038350Cucurbita maxima (Rimu)cmacucB0353
CsaV3_5G038350Cucurbita maxima (Rimu)cmacucB0574
CsaV3_5G038350Cucurbita maxima (Rimu)cmacucB0860
CsaV3_5G038350Cucurbita moschata (Rifu)cmocucB0348
CsaV3_5G038350Cucurbita moschata (Rifu)cmocucB0562
CsaV3_5G038350Cucurbita moschata (Rifu)cmocucB0846
CsaV3_5G038350Cucurbita moschata (Rifu)cmocucB0864
CsaV3_5G038350Cucurbita pepo (Zucchini)cpecucB0047
CsaV3_5G038350Cucurbita pepo (Zucchini)cpecucB0210
CsaV3_5G038350Cucurbita pepo (Zucchini)cpecucB0517
CsaV3_5G038350Cucurbita pepo (Zucchini)cpecucB0720
CsaV3_5G038350Wild cucumber (PI 183967)cpicucB045
CsaV3_5G038350Wild cucumber (PI 183967)cpicucB171
CsaV3_5G038350Wild cucumber (PI 183967)cpicucB291
CsaV3_5G038350Bottle gourd (USVL1VR-Ls)cuclsiB369
CsaV3_5G038350Bottle gourd (USVL1VR-Ls)cuclsiB378
CsaV3_5G038350Bottle gourd (USVL1VR-Ls)cuclsiB381
CsaV3_5G038350Melon (DHL92) v3.5.1cucmeB385
CsaV3_5G038350Melon (DHL92) v3.5.1cucmeB397
CsaV3_5G038350Melon (DHL92) v3.6.1cucmedB379
CsaV3_5G038350Melon (DHL92) v3.6.1cucmedB391
CsaV3_5G038350Melon (DHL92) v3.6.1cucmedB401
CsaV3_5G038350Watermelon (Charleston Gray)cucwcgB369
CsaV3_5G038350Watermelon (Charleston Gray)cucwcgB376
CsaV3_5G038350Watermelon (Charleston Gray)cucwcgB410
CsaV3_5G038350Watermelon (Charleston Gray)cucwcgB418
CsaV3_5G038350Watermelon (97103) v1cucwmB393
CsaV3_5G038350Watermelon (97103) v1cucwmB451
CsaV3_5G038350Watermelon (97103) v1cucwmB462
CsaV3_5G038350Watermelon (97103) v2cucwmbB365
CsaV3_5G038350Watermelon (97103) v2cucwmbB374
CsaV3_5G038350Watermelon (97103) v2cucwmbB391