CsGy5G028610 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G028610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable prefoldin subunit 2
Location	Chr5 : 32238529 .. 32238975 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

mRNA sequence

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

Coding sequence (CDS)

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGCGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGCCAGTGAACACTCTCTGGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACCATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCGAGACTCAATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCCTAGTAGGCCCTGCAGGTGAAAGCTAA

Protein sequence

MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGAAQGVLVGPAGES

Homology

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BLAST of CsGy5G028610 vs. NCBI nr
Match: XP_004141456.1 (PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetical protein Csa_5G638310 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 4.3e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of CsGy5G028610 vs. NCBI nr
Match: XP_022956082.1 (probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefoldin subunit 2 [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 6.2e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]

BLAST of CsGy5G028610 vs. NCBI nr
Match: XP_022979430.1 (probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefoldin subunit 2 [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 6.2e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

[Close]

BLAST of CsGy5G028610 vs. NCBI nr
Match: XP_022934448.1 (probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_023540953.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023540954.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 1.8e-68
Identity = 143/148 (96.62%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of CsGy5G028610 vs. NCBI nr
Match: XP_023528202.1 (probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 1.8e-68
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

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BLAST of CsGy5G028610 vs. TAIR10
Match: AT3G22480.2 (prefoldin 2)

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-44
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

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BLAST of CsGy5G028610 vs. Swiss-Prot
Match: sp|Q9LJ98|PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-43
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

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BLAST of CsGy5G028610 vs. Swiss-Prot
Match: sp|A1A4P5|PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]

BLAST of CsGy5G028610 vs. Swiss-Prot
Match: sp|Q9UHV9|PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]

BLAST of CsGy5G028610 vs. Swiss-Prot
Match: sp|B0BN18|PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L++ L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]

BLAST of CsGy5G028610 vs. Swiss-Prot
Match: sp|Q55GN3|PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 51/112 (45.54%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 7   SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMI 66
           S++K+ + E  +   Y  L+S+  QI S+I+E E +  E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 67  GGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI 119
           GGVLVERT+ EVLP +++N++G++EV+ +L+E L  K KE++D  A YKI+I
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]

BLAST of CsGy5G028610 vs. TrEMBL
Match: tr|A0A0A0KVR4|A0A0A0KVR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.8e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of CsGy5G028610 vs. TrEMBL
Match: tr|A0A1S3C9H2|A0A1S3C9H2_CUCME (probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.5e-68
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of CsGy5G028610 vs. TrEMBL
Match: tr|A0A2P5FWI4|A0A2P5FWI4_9ROSA (Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.6e-59
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEME SEHSLVI+A++PLDPSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAVQPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DG   +++SGRKEG AQGVLVGPAG S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

[Close]

BLAST of CsGy5G028610 vs. TrEMBL
Match: tr|A0A2P5E3G8|A0A2P5E3G8_PARAD (Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEME SEHSLVI+AI+PL+PSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAIQPLEPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DG   +++SGRKEG AQGVLVGPAG S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

[Close]

BLAST of CsGy5G028610 vs. TrEMBL
Match: tr|A0A2P4MN98|A0A2P4MN98_QUESU (Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.1e-57
Identity = 121/148 (81.76%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS +E E++EP+NEQ VAN Y ++R+ELNQIYSKITELEME  EHSLVI+AI+PLDP+R
Sbjct: 35  MASRAEDEQREPINEQAVANKYASMRTELNQIYSKITELEMEVGEHSLVINAIQPLDPTR 94

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RC+RMIGGVLVERTI+EVLPAVQRNKEGLEEVI+RLNEALEKKKKEISD EAKYKIRIRK
Sbjct: 95  RCFRMIGGVLVERTIQEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDFEAKYKIRIRK 154

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           PDGE K +D GRKEG+AQGVLVGPAG S
Sbjct: 155 PDGETK-DDGGRKEGSAQGVLVGPAGGS 181

The following BLAST results are available for this feature:

BLAST of CsGy5G028610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141456.1	4.3e-70	100.00	PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetic...	[more]
XP_022956082.1	6.2e-69	98.65	probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefo...	[more]
XP_022979430.1	6.2e-69	98.65	probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefold...	[more]
XP_022934448.1	1.8e-68	96.62	probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 pro...	[more]
XP_023528202.1	1.8e-68	97.97	probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probab...	[more]

BLAST of CsGy5G028610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22480.2	2.2e-44	67.79	prefoldin 2	[more]

BLAST of CsGy5G028610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LJ98\|PFD2_ARATH	4.0e-43	67.79	Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 S...	[more]
sp\|A1A4P5\|PFD2_BOVIN	1.0e-22	43.75	Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1	[more]
sp\|Q9UHV9\|PFD2_HUMAN	1.0e-22	43.75	Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1	[more]
sp\|B0BN18\|PFD2_RAT	3.0e-22	43.06	Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1	[more]
sp\|Q55GN3\|PFD2_DICDI	3.9e-22	45.54	Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 ...	[more]

BLAST of CsGy5G028610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVR4\|A0A0A0KVR4_CUCSA	2.8e-70	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1	[more]
tr\|A0A1S3C9H2\|A0A1S3C9H2_CUCME	3.5e-68	97.97	probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1	[more]
tr\|A0A2P5FWI4\|A0A2P5FWI4_9ROSA	6.6e-59	84.46	Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1	[more]
tr\|A0A2P5E3G8\|A0A2P5E3G8_PARAD	1.5e-58	84.46	Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=...	[more]
tr\|A0A2P4MN98\|A0A2P4MN98_QUESU	6.1e-57	81.76	Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR027235	PFD2
IPR002777	PFD_beta-like
IPR009053	Prefoldin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G028610.1	CsGy5G028610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	COILS	Coil	Coil	coord: 79..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..148
None	No IPR available	SUPERFAMILY	SSF46579	Prefoldin	coord: 19..117
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 12..122 e-value: 1.4E-25 score: 91.3
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 16..118 e-value: 9.9E-26 score: 89.7
IPR027235	Prefoldin subunit 2	PANTHER	PTHR13303	PREFOLDIN SUBUNIT 2	coord: 8..143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G028610	Csa5G638310	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G028610	MELO3C022016	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G028610	CSPI05G29210	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G028610	MELO3C022017.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G028610	CsaV3_5G038350	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G028610	Bhi06G000296	Wax gourd	cgybwgoB447

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G028610	Cucumber (Gy14) v2	cgybcgybB030
CsGy5G028610	Cucumber (Gy14) v2	cgybcgybB094
CsGy5G028610	Cucurbita maxima (Rimu)	cgybcmaB609
CsGy5G028610	Cucurbita maxima (Rimu)	cgybcmaB647
CsGy5G028610	Cucurbita moschata (Rifu)	cgybcmoB584
CsGy5G028610	Cucurbita moschata (Rifu)	cgybcmoB625
CsGy5G028610	Cucurbita pepo (Zucchini)	cgybcpeB598
CsGy5G028610	Cucurbita pepo (Zucchini)	cgybcpeB625
CsGy5G028610	Cucurbita pepo (Zucchini)	cgybcpeB674
CsGy5G028610	Cucumber (Chinese Long) v2	cgybcuB201
CsGy5G028610	Cucumber (Chinese Long) v2	cgybcuB215
CsGy5G028610	Bottle gourd (USVL1VR-Ls)	cgyblsiB317
CsGy5G028610	Bottle gourd (USVL1VR-Ls)	cgyblsiB325
CsGy5G028610	Melon (DHL92) v3.5.1	cgybmeB322
CsGy5G028610	Melon (DHL92) v3.5.1	cgybmeB333
CsGy5G028610	Melon (DHL92) v3.5.1	cgybmeB345
CsGy5G028610	Watermelon (Charleston Gray)	cgybwcgB323
CsGy5G028610	Melon (DHL92) v3.6.1	cgybmedB335
CsGy5G028610	Melon (DHL92) v3.6.1	cgybmedB343
CsGy5G028610	Watermelon (Charleston Gray)	cgybwcgB328
CsGy5G028610	Watermelon (Charleston Gray)	cgybwcgB353
CsGy5G028610	Watermelon (97103) v1	cgybwmB347
CsGy5G028610	Watermelon (97103) v1	cgybwmB399
CsGy5G028610	Watermelon (97103) v1	cgybwmB409
CsGy5G028610	Wild cucumber (PI 183967)	cgybcpiB203
CsGy5G028610	Wild cucumber (PI 183967)	cgybcpiB216
CsGy5G028610	Silver-seed gourd	carcgybB0055
CsGy5G028610	Silver-seed gourd	carcgybB0280
CsGy5G028610	Silver-seed gourd	carcgybB0686
CsGy5G028610	Cucumber (Chinese Long) v3	cgybcucB203
CsGy5G028610	Cucumber (Chinese Long) v3	cgybcucB218
CsGy5G028610	Watermelon (97103) v2	cgybwmbB331
CsGy5G028610	Watermelon (97103) v2	cgybwmbB341
CsGy5G028610	Watermelon (97103) v2	cgybwmbB357
CsGy5G028610	Wax gourd	cgybwgoB410
CsGy5G028610	Wax gourd	cgybwgoB474