CsaV3_5G030800 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G030800
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5 : 25238934 .. 25239191 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAAAGGCCTCGGCGAAGCCAATCGAAATCGTACCCACGATGGAATTCAGATATGTGGGTCAAAAACCCTACGACGAGTAACTGGGACCGCCGGAGAAAAAGTTCGGCGTCAATCTATGTAGGTGGCTACTCGCGTCGGTTGCCGGAGGAACTTGGTCGTCGACGTGGGTTCGCAGAGCCGCCGAGAAGGAGAAACAGTGAGCAAATGCCAATATTTATATGGCGTCTGATGCTCGCCGGAGAAGAAGAGTGA

mRNA sequence

ATGTTGCAAAGGCCTCGGCGAAGCCAATCGAAATCGTACCCACGATGGAATTCAGATATGTGGGTCAAAAACCCTACGACGAGTAACTGGGACCGCCGGAGAAAAAGTTCGGCGTCAATCTATGTAGGTGGCTACTCGCGTCGGTTGCCGGAGGAACTTGGTCGTCGACGTGGGTTCGCAGAGCCGCCGAGAAGGAGAAACAGTGAGCAAATGCCAATATTTATATGGCGTCTGATGCTCGCCGGAGAAGAAGAGTGA

Coding sequence (CDS)

ATGTTGCAAAGGCCTCGGCGAAGCCAATCGAAATCGTACCCACGATGGAATTCAGATATGTGGGTCAAAAACCCTACGACGAGTAACTGGGACCGCCGGAGAAAAAGTTCGGCGTCAATCTATGTAGGTGGCTACTCGCGTCGGTTGCCGGAGGAACTTGGTCGTCGACGTGGGTTCGCAGAGCCGCCGAGAAGGAGAAACAGTGAGCAAATGCCAATATTTATATGGCGTCTGATGCTCGCCGGAGAAGAAGAGTGA

Protein sequence

MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFAEPPRRRNSEQMPIFIWRLMLAGEEE
BLAST of CsaV3_5G030800 vs. NCBI nr
Match: KGN51728.1 (hypothetical protein Csa_5G593420 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.4e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 1  MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA 60
          MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA
Sbjct: 1  MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA 60

Query: 61 EPPRRRNSEQMPIFIWRLMLAGEEE 86
          EPPRRRNSEQMPIFIWRLMLAGEEE
Sbjct: 61 EPPRRRNSEQMPIFIWRLMLAGEEE 85

BLAST of CsaV3_5G030800 vs. TrEMBL
Match: tr|A0A0A0KQ33|A0A0A0KQ33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G593420 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 1  MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA 60
          MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA
Sbjct: 1  MLQRPRRSQSKSYPRWNSDMWVKNPTTSNWDRRRKSSASIYVGGYSRRLPEELGRRRGFA 60

Query: 61 EPPRRRNSEQMPIFIWRLMLAGEEE 86
          EPPRRRNSEQMPIFIWRLMLAGEEE
Sbjct: 61 EPPRRRNSEQMPIFIWRLMLAGEEE 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN51728.16.4e-42100.00hypothetical protein Csa_5G593420 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KQ33|A0A0A0KQ33_CUCSA4.2e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G593420 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G030800.1CsaV3_5G030800.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G030800MELO3C011923Melon (DHL92) v3.5.1cucmeB381
CsaV3_5G030800MELO3C011923.2Melon (DHL92) v3.6.1cucmedB375
The following gene(s) are paralogous to this gene:

None