CsaV3_5G030240 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G030240
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Phosphoribosylformylglycinamidine synthase
Location	chr5 : 24853619 .. 24861453 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCGGTGGGAAAGAACAAAATATCTCTCTACTTCCCAATTCCAATACTGCAAGCAATTCCCATTCCCACGACTCAATCAAACCTCCACAACCAGAAATGGCCGTAGCCAGAACCATGTCCCGTTCTTTATCCATCTTCTTAACGGAGCCATCGCGACCCCTTCACTTCTCTCCTTCTTCCTCCTCCTCCTCCTCCATCCGAACCAACCGATCCTTCTCTCACAGATTGTATTGCAATGCCCGGAGAATCAACGCTCGAGGTTTTCATTTCTCTAAACCAACTCTTCTGAACTGTTCCTACGATGACACCCAGTCGACGTCTTCCTCTAATCAGGACGGTCAGGACCCCCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGGTTTCTACCTGACCCTTATGTTATCAAGGCTTCCGAATTGTAAGCCTTAAATCGATTAATTATGTGTAATTTTTTGTGTGAGTTTGGGCTTGTTCGTGTTCGTGTTTGTGTTTGTGTTTCGTGATGGCTTCTGATAGTTAATTCGTTTTGTTGCGTTGTACAGAGGTATCTAAGACAGAAGGGAGGGTTGGGCATACCACGAATATGGTACTTGGAGGAACAGTGACTAGTGATTCTTCCAATGAGTGGCTCGCTCTGGATCAAAAGGTACGAAATAGTTGCTCCCTTACCTGATTTATGCATGGAATGGCAGCTTTGTATGTTGGGTGTTTAGGTCAATTAGACTTGGGTATTTTAAGCTATTTATTTCTCTGTCTTTGCCGCAGTTAGAAGCTAGAGAAAACTCAGGGAGGATTTTACTGTGAAAATCATATTATCTAGGGATTTTTGTAGGGATGAACCAGTCCAAGAGCTTTAATGTTGAATGACACAGTTCTAAAAAATCAATGAAGACTAACATTCTTCTCATGTCATAGAGCACCCCACCACCCATTATCGAGTTAGAGATGTCTCACTGTGAAACGGCGAGAGCCCCAACACAAATTTCACTGAAACGGCCGGAGCCTTAACACGAATTTCATTTTTAATCACCAGTTGGCTGATTGTTGAATTTTTTTTAAATATCACGATTGAAATGTGCTTTAGGGCTCTGATTATTTCAAGATAGTGCTATGTGATATCAACAAAAGGATAGTTTTTATTCGCCTTCTAGGATTGGGTTATTCCGCGTTAGCACCTATGGGATTGGGTCATCAGTATAAAAACCTCCACTGTCTAGCTAATGGCTATATTTTTACCACCACCTTTGATTTTGCATGATTATTGGACAGGTGAACTCGTACCCTGGTGTTAGAGGCTTTACAGCGATTGGAACTGGAGGAGATGATTTCGTGCAATCTATGGTCGTTGCTGTGGAATCTGTCATCCAACAACCAATTCCTGAGGTGATTGTTTTCAGTTTCCACAGGGTCTATCTTTCACTTCATCCATCAGTTATATGCGGTGCTTTACGTGTGTAGAATTTCTTAGAAATTGAAATTAATGCTTGCCGTTAGTGATGAAATTAGGCCAGATAATATTGTTTTCTGTGTTTTCTTTTTAAGTGGGAAACATAGTTTTTCTGGTTAATATCAGTTAGACAATATTATACCGAATGACTTAATAGTAAAAATTGGAAAAAGTAGTCTAAATCAAATAGGTGTTATCGATTAAGAAGATAGTTTGACATAAACGGCAAAGATAGGTACAAAATAGTTTGAGATTGTCTTGTAACAATTTCCATCAAAGTTGAACTCCGGCAAATGTCCAAACCTAAACATGCTGGAAGCGTTCTTTGAACTCTTTTCAACTTTCGTGGACTGGCAAAGTCTGTCATTTTCCCCATCCCTTGCGCATGATAGCCGACAAAAAACAATGTAGAAGTTCTTGTATATGTGGACCCGGATGGTCACTGCATCAAACTTCAAATCTCCTAAACGACAAGGTGGATGCTATTATTTGAACTTCAAAAAATCACAAAAATTCTAAGTTCTCAAAGCTTAATGTGTTGCATGGTTTAGAGGAACAGTTGGTATTTTGTAAGAATCCTAGTTAGGAAAATAGTAGACTTGTTAGGAGAATATTAATGTGGTTGTTAGTTGGGGCGTGTTAGTAAATAGTTTGTAAGAAGGTCAGTTTATTTTGCTATAAATAGAAGGAGAGGGGTCGGAGTAAGGGGTTTAAAATTTTGTGGGATTTCCTCCTGGGAATCTGGGAGAGTGGAGCCCTCTCGAAAGGCTCAGGGTTACATTGTTACTTGTTCTTTCGATATTATAACATATTTCAATATATTTTCCACATTTGGTTGTTCTTGAGTTGTTTGTGTGTTCTTGAGAATCTTTTGTTAGGTTGGGTACCTAACATATTTCTTATGAATAAAATGGGCTAGAAAAGCAATTCCTAGCGAATTACAGGACATTTCTGGACAGTCCAAAGGAACATATATTTTGGAGACAAATATGCTAAAATGACTTGAATGAAGTGGATCAACATTCTACTCTTATCTATCTTTCAGTTGGGTGAAAGAAATGTACTCATTTCCTAGATGCTCTCTTTTGAAGTGAGTTTGTTTAATGGCTTAAAGGTGATCAGTCATGGGTTAATTTCTCCCCCCGAGACATTTGTTTGGATTTGGAGCTGGGAGTTCCTTCCCAGAAAGGAAGAATATTGAGTGAAGAATTTGGAACGTCATCAAAGTTACACTGAATAGTGCAACCTACATCCCTGGAGTCTTCTAGAAATTTAACCTTGTTTGCAACCTTAGATTGTTGACTTACTAGCCTCTCTGCCCCAGGGTCCATTTTTTATGGCTCATGAACAATTGTATATCTTCTTTATTTTTCTTCTCTCGAATTTCCTTAAGAAACGATCTTATGGGTCTATAAGTATAACTTTACAAGAAATACAGGAAAGCCAAGCCCCATGCCGAGGGAACAGAAAAAGCTCTATAATAGGAGTATTCGTGCTACAATCCTTGTAAGGGGCAACAAGTTTACACCAAGAAAGCTTTTGTCTTCAATTTATGATAGCTTGATTTGGCTCCTGGCTCTTGAAAGGAACAGTAGGATCTTCAGAACCCTCGAGGAGCTTTATGGACCATTGTATTTTTTGGCTCTTTTTTAGTGTATATTGTAATGATCCTTCAACATAAACGGTTTTACTTCTTTTTCTAACAACTTGAACGTATGGAGCCTGGCTTTCCTCCTCATTCACCTTTTCCATGATGAAGTTTACACCAAGAAAGGGCTTCAAAATAGAGGGATTTGAACTAATTGATTGAGATTTTTGTTCTTTGTTGATGAAAACCCTACTGTTCCTTTCAAGCCAAAGATCTCGGGATTAGTCGCCCAATATGGAAATAAGATTTTTTTTTTATACTTGTGGTAAGTGGCATGTCCCTATTGAAGTAACCCATAATTCTAGAACTTACAGCATAGGAGGTTGGCAATTATTAGAAGGGCCTAGGAAAAGAACTTGTTATTGAGAAAGTTAGATTTTTTGGGTCCCTGTTTACCTTACCTTATCTTTTTTGTTTTCCCCTTCTTTCTCTTATTGGTGCCTGGTGGTCAACTATTTTAGTTGGATTCTTTGTAAAAGGGCCTGAAGTGTGTGTTCTTGGTGGCTTTGTAGTTAGGAGATCTTGTTAGCTTTTTCTCTATGATAGATTATTTATAACTTCCAATTCATTCAAGCTATCAAATTCTTCAACATCTGCTCGGGAATATAATCAATTTAGCAAGATGGGTCATCATAGCGGTGAACTGCTCACCTTTGAATATAAGTACACTGGGTTCAATTGTGCACATACCAATTATACCTTGGGTAAAGATTGTAGGTTCTTCAATAAGCCAGAAGAATTACGTTCTTTGATTGAATGAGCTTGCACTGGTGACACATTTAGCACTATGTACTATTCTTTTAATTAAATCTAGATCGTTAGATATGGTAGCCTCATGTCTTGTCATATGTTGCACAATATTCATTGATTATCAAACCCTACTTTCTACGTGACTCCATCATCTAGTTTTGGTTTAGACATCTTATAACTGTTGTATCCGTTATTTTAAGCTTTACAACCCCGCTACTTAAGTCCCAAGTATTAACTGAAATTAAAACCCAACAAATTGCCATTTTGTTCAAATTTCAAATTTTCGAAGATTCACGAGAGACCTATACCTTCATGTGAGCTTATCCCCCAATCCCATTATAAAACCACTTCTAAGTGTGGGAACAACTATCTGGTGATTGGAATTTAAGTTTGGAAGGAAGAAGCCTGCCGAACTAATTTAGAGGTGCAGTCTCGTGCAATTGAATGGTATATCTTTCAACGACTCTTTGGATTGTGAACGGGAAAAGGGAGAACTTGAGGATAGTTCTGCCTAAATGTCTGTCTCATGATATTGTTCCAAGGAAACTGTTCATCGTGAGATTTTAACTGCTAAATCTCTGTCTCATGATATTGTTCCAATGGAGGAAGCTGTTCATCGTGAGATTTTAACTGCTATTTTGAAACTGCTTTATCCAAGAAAGTCTAAACCTTTTCTTGTAGACTATTCTTTGGTGGGATGGATACACATGATAAAATCCATGTGTGGATCCGTTTAATTTTAGCAGCCTCATGATGATGTGCTTCACGTAGAAAAGAATAAAATTGTTGATGGCCTTTCAGTATGGTGCCTTCTATTGGAAATAATTCGGCAATAAATTTGGAGACTGTTTGATGTTTGCGTGGCAGGCTTCTTTTCACTGTGATTGCGTGCCAACCTTTTCAAAGATAAGGTTTAAGGGTTGCTGAGTAATGCTTTTAGAGATTTCTATTGGAAGATTTCAGCAAAGGGGATAGAAGAATCTGATCGTCGGTAGAAGTAAATTGTAATTGAAGAATTTTGGGATGCTTTTGCTTTTTTTTTCTTCTTCTTCTGCAAGCTCCTTACTTTTCTTTTTCATAACTTACTCTTTTTCTACACTTTGTACAATTTTCAAGGTCTTTTTCTTTTCTTTATTTTACTTTTTGAGGCCTTTCCGTATTTCATTTAATTATAGGACAAAACGACAAGATAGCAGGAACTGGGTAAAGTATGTAAAAGCTAATCCAAGTAGTAAGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGACCCACTACTAAACAGTTTTTGGTGATTTAACGTAATCTTGGTGAGCACAGCCTTATGGTTTTTCATTGAAGAACTGTGCTGGAAGGATAGAAACAATGTCAAACAGATCGTTGGTAAAAAAGAGAGGAAAAACATCAAAGACATTGAACGTTTAGTTGGTCTTTTTTAAGCAAACACAATTTCTCTTACTAGTAAATTGTTTTGATGTCTCTGTAAAATTCAGAAAATAGAAGGATATGCTTGATGTAGTAAATTGCCGACGGCAAAGTCCAAATTTCCGTAAAGGAATGAGGTAGAACCTTGCTTGGTTAATGCATTAATAAAGTGGACCTCCATTTTGTTCTTGATAACAATGTTCTGTTTAGTCCCCACATCTTACGCATTGAGGTTAGTTTAACTAATTTGGCTGTACATATCGTTTGTTTTGTTATAGTTTGTTCTTCTGTTTCTAGTAATTTCTATTTCTGTACATTGCTTATAAATAGGCATCGATATTCATTTCTTTTATGAAATGATTTCAATTAATAATCTCAAAATATCTGCAACAAATCTAACAATTAAGTCATTGTGAAAGTGGTTCGACATGAATTATCAATAGATAAATGAACGGGCTATGCCTCAATAGGATGATAGTTTCCAGATTTGTTCTTGCATTTATTTGGTTTGCTAAAAAATATATCTCCGTGTTACAGGGCAAGGTGAGGCATAAATTATCAGCGAAAGGGAAGTACATTTCGGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTCCCTCTCTTTCTCTTCTATTTATTTGTTCATTAATTATGCCGTACAGTTTGTTTAGTATGTCCTCCACCCGCCAACAAACAATGTTTGGTCATGATGCATGATGCTTCTTGATTTGGTCGACCCCATCCCCAAAATAAATAAACAATAGGTTAACTGTATATAGTTTTTCTATCTAACATTTGCCAACCTTATCAAATCTCATCCCTGAGGTCCAAAGCCCTAACTCTAGAAAATGGTAAAAAAGAATGCTTTTGTTACTACAACTTTTAATCGTGTCCTGAAGATTCAAAGTTTATTTGATTGCCAATTAGATTATAATACAAACTTTTTTATATCATCAACATACATGGAAATCGAGAAATTAATAGGTTAAATCATGGTCAATTGTTAGAGTAGAATAATAGGAGATAGATAGAAGGTTTAAGAAAAGTTTGTTAAAAGAATTGCAGATCACTTTATCACTAGTTCACTTTTTCACTAAAGATTTTTCTGACATTCATTGGAATTTTAACAAATGAACTTTTGATGAATTAAAATAGTTTTTTAAGGAAAAAATTAGGAAATAAATAAAGAACTTTAGTAAAGTAATCCGAACTTAAATATTATCATCGGCTGTATTAAACAGAAGAAATTATTATTATTTTTATTATTTTTGGCCAATTATTTTGAAATGGTTAAATTATATAAACACTCTTAAATTTTGCTATTTGTTTAAAAAAACAAAAGTTGCAATCTTACTTCTAACTTTTACAAACGTTTCAAAACTGCCTTGGAGTATATATTCTTTTGAATTTTGGACAAAAACTTAGATACAAAATGATGTATAATGATCTAGAACAACATTTAGACCATCACATCATTTTGGACTATCGTCACCCAATTCGAAATCTCAATTGTTTGAAAAATTGAAAGAGATTATTGTTTCAAGGGCACTTTTGAAACGTTTGTAAAAATTGAACGGTAATATTGTGTAACTTTTGATTGTTTATGTGTAATTTTTAAACAAACGACAAAATCCAAGGGGAATGGTGTTTAATAGTTTAGCATTTTGAAAATAATGGCAAGTGAATCTTTTTGTAGACTGAGCTTGTAACGTGTAATGTTTTGTGGTTTCCCTTTCCAGGTTCAAGCTGTATACAATGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAATTCTCTTTTTTGAATTAGGGTTTACTTGTACGAGTCCTTGTAATGTAATCACTCTTATCCTTCTAGATATGTTGATTATTCCACCCAAAAAGCTCTCTAATTTTACGTCATTTTTTCTCCCTCTCTCTGACTTCCATCTTTTGCACTATAATTTCCAAACCTACCACCCCCACTAGTTTTAGGTTAAATTGCTAATTTGGTCTCGGAAGAGAATTTTATTAAACTATAGAGACTATTTACTAAGTTGTATCAAACCTGAAGGATCAAATTCAAACTTTCTCCAACCACAGGGGCTATATTCACAATCGAACCGTCTTAAGCTGCCCATGTTGCTGCATTGTTTGCTTGTGTGTTGTTGATAAGCCTTTCATTTGAAATTTTGGATAAAGCATTTGGTTACTACAGGGCAAGACAAATGAACCATCTTTGTCTTTTTATATAAATAGATTCTTTTTCTTTCTTTTGTCTCCTCCTCCAATTTGAAAGTTTGATTGAAAATTTTAAACTAACTTGATGCAGATTTCAAATCAATTCAACTTTAGGAACAATGTTGCCACAATTATCGATCATCAATTCAACTTTATGAACTATGTTGCCACAAATATCTACCATTATTTTGCTATCACTTTATTGTACAGTTAGTTGAATGATGATATATAATATTGCTTGAATTCTTCTCTTCCCATAAAGAGAATGTTGATAATGACTATTCTTATTCAACTCTTTTTTCCCACAGCATTCAATCCCCTCTTCAGTTGAT

mRNA sequence

ATGGCCGTAGCCAGAACCATGTCCCGTTCTTTATCCATCTTCTTAACGGAGCCATCGCGACCCCTTCACTTCTCTCCTTCTTCCTCCTCCTCCTCCTCCATCCGAACCAACCGATCCTTCTCTCACAGATTGTATTGCAATGCCCGGAGAATCAACGCTCGAGGTTTTCATTTCTCTAAACCAACTCTTCTGAACTGTTCCTACGATGACACCCAGTCGACGTCTTCCTCTAATCAGGACGGTCAGGACCCCCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGAGGTATCTAAGACAGAAGGGAGGGTTGGGCATACCACGAATATGGTACTTGGAGGAACAGTGACTAGTGATTCTTCCAATGAGTGGCTCGCTCTGGATCAAAAGGTGAACTCGTACCCTGGTGTTAGAGGCTTTACAGCGATTGGAACTGGAGGAGATGATTTCGTGCAATCTATGGTCGTTGCTGTGGAATCTGTCATCCAACAACCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCAGCGAAAGGGAAGTACATTTCGGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTTCAAGCTGTATACAATGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAA

Coding sequence (CDS)

ATGGCCGTAGCCAGAACCATGTCCCGTTCTTTATCCATCTTCTTAACGGAGCCATCGCGACCCCTTCACTTCTCTCCTTCTTCCTCCTCCTCCTCCTCCATCCGAACCAACCGATCCTTCTCTCACAGATTGTATTGCAATGCCCGGAGAATCAACGCTCGAGGTTTTCATTTCTCTAAACCAACTCTTCTGAACTGTTCCTACGATGACACCCAGTCGACGTCTTCCTCTAATCAGGACGGTCAGGACCCCCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGAGGTATCTAAGACAGAAGGGAGGGTTGGGCATACCACGAATATGGTACTTGGAGGAACAGTGACTAGTGATTCTTCCAATGAGTGGCTCGCTCTGGATCAAAAGGTGAACTCGTACCCTGGTGTTAGAGGCTTTACAGCGATTGGAACTGGAGGAGATGATTTCGTGCAATCTATGGTCGTTGCTGTGGAATCTGTCATCCAACAACCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCAGCGAAAGGGAAGTACATTTCGGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTTCAAGCTGTATACAATGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAA

Protein sequence

MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL

Homology

[Close]

BLAST of CsaV3_5G030240 vs. NCBI nr
Match: XP_011655558.1 (PREDICTED: uncharacterized protein LOC101214536 [Cucumis sativus] >KGN51668.1 hypothetical protein Csa_5G589360 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 5.0e-112
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60
           MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK
Sbjct: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60

Query: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120
           PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS
Sbjct: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120

Query: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180
           NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY
Sbjct: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

[Close]

BLAST of CsaV3_5G030240 vs. NCBI nr
Match: XP_008446030.1 (PREDICTED: uncharacterized protein LOC103488883 [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 5.9e-105
Identity = 203/216 (93.98%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSP---SSSSSSSIRTNRSFSHRLYCNARRINARGFH 60
           MA ARTMSRSLSIFLTEPSRPLHFSP           RTNRSF+HRLYCNARRINARGFH
Sbjct: 1   MAAARTMSRSLSIFLTEPSRPLHFSPXXXXXXXXXXXRTNRSFTHRLYCNARRINARGFH 60

Query: 61  FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS 120
           FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS
Sbjct: 61  FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS 120

Query: 121 DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK 180
           DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK
Sbjct: 121 DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK 180

Query: 181 GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 216

[Close]

BLAST of CsaV3_5G030240 vs. NCBI nr
Match: XP_022151740.1 (uncharacterized protein LOC111019651 isoform X1 [Momordica charantia])

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 177/213 (83.10%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60
           MA +RT+ RS SIFL EP RP+HFS  +SSS ++ T+RSF+HRL CN     ARGFHF K
Sbjct: 1   MAASRTVLRSASIFLMEPYRPVHFS-RASSSIALGTSRSFTHRLNCNVTTARARGFHFRK 60

Query: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120
            T+LNCS+D+TQSTSSSNQDGQ PPQEAVLKAISEVSKTEGRVGHTTNMV+GGTVT DS+
Sbjct: 61  RTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTDDST 120

Query: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180
           NEW+ALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+QQPIPEGKVRHKLS+KGKY
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQQPIPEGKVRHKLSSKGKY 180

Query: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           +SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 VSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 212

[Close]

BLAST of CsaV3_5G030240 vs. NCBI nr
Match: XP_022966813.1 (uncharacterized protein LOC111466408 [Cucurbita maxima])

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-91
Identity = 178/213 (83.57%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60
           MA +R + RS SIFLTEPSRP HFS +SSSS ++ T RSF HRL CN     ARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFPHRLNCNVWSSRARGFHFPE 60

Query: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120
            T+LNCS D TQ TSSS+QDGQ PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVT DS+
Sbjct: 61  RTVLNCSLDKTQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180
           NEW+ LDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY
Sbjct: 121 NEWIILDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           +SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 VSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

[Close]

BLAST of CsaV3_5G030240 vs. NCBI nr
Match: XP_022945039.1 (uncharacterized protein LOC111449401 [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 178/213 (83.57%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60
           MA +R + RS SIFLTEPSRP HFS +SSSS ++ T RSF+HRL CN     ARGFHF +
Sbjct: 1   MAASRAVLRSASIFLTEPSRPFHFSRASSSSFTLGTRRSFTHRLNCNVWSSRARGFHFPE 60

Query: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120
            T LNCS D+TQ TSSS+QDGQ PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVT DS+
Sbjct: 61  RTGLNCSLDETQLTSSSDQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDST 120

Query: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180
           NEW+ALDQKVNSYPGVRGFTAIGTGG DFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY
Sbjct: 121 NEWIALDQKVNSYPGVRGFTAIGTGGHDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           +SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 VSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

[Close]

BLAST of CsaV3_5G030240 vs. TAIR10
Match: AT1G27385.4 (unknown protein)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-53
Identity = 117/200 (58.50%), Postives = 142/200 (71.00%), Query Frame = 0


Query: 16  TEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHF--SKPTLLNCSYDDTQS 75
           T  +R   F P S +S  +       H L+   + +   GF     + T LNCS++D   
Sbjct: 18  TSGARRCFFLPPSPASVPV-------HGLFPAPKSLCFNGFASVPERATRLNCSHND--- 77

Query: 76  TSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSSNEWLALDQKVNSY 135
                Q  Q PPQEAVLKAIS VSKT+GRVG TTNM++GGTV  DS+ +WL LDQKVN+Y
Sbjct: 78  -----QSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDSAKDWLELDQKVNTY 137

Query: 136 PGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKYISVNIGPVQVISS 195
           P  RGFTAIGTGG+DFV +MVVAVESVI + IPE  V+  LS+KGKY+SVNIGP+QV+SS
Sbjct: 138 PTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIGPIQVVSS 197

Query: 196 EQVQAVYNAMKRDDRMKYFL 214
           EQVQAVYNAM+RD+RMKYFL
Sbjct: 198 EQVQAVYNAMRRDERMKYFL 201

[Close]

BLAST of CsaV3_5G030240 vs. TrEMBL
Match: tr|A0A0A0KPY6|A0A0A0KPY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589360 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.3e-112
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60
           MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK
Sbjct: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60

Query: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120
           PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS
Sbjct: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120

Query: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180
           NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY
Sbjct: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

[Close]

BLAST of CsaV3_5G030240 vs. TrEMBL
Match: tr|A0A1S3BDM1|A0A1S3BDM1_CUCME (uncharacterized protein LOC103488883 OS=Cucumis melo OX=3656 GN=LOC103488883 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.9e-105
Identity = 203/216 (93.98%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MAVARTMSRSLSIFLTEPSRPLHFSP---SSSSSSSIRTNRSFSHRLYCNARRINARGFH 60
           MA ARTMSRSLSIFLTEPSRPLHFSP           RTNRSF+HRLYCNARRINARGFH
Sbjct: 1   MAAARTMSRSLSIFLTEPSRPLHFSPXXXXXXXXXXXRTNRSFTHRLYCNARRINARGFH 60

Query: 61  FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS 120
           FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS
Sbjct: 61  FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS 120

Query: 121 DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK 180
           DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK
Sbjct: 121 DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK 180

Query: 181 GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 216

[Close]

BLAST of CsaV3_5G030240 vs. TrEMBL
Match: tr|A0A2C9USL8|A0A2C9USL8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G011000 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.8e-70
Identity = 151/215 (70.23%), Postives = 172/215 (80.00%), Query Frame = 0


Query: 5   RTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSF--SHRLYCN--ARRINARGFHFSK 64
           RT+ R  S+F+TEP RPLH    +  S   RT  S   S +  C    RRI AR FH ++
Sbjct: 4   RTLMR-CSVFITEPWRPLHHQNRALYSLPSRTPASGFPSRKSSCGFCRRRIRARDFHLAR 63

Query: 65  PTLLNCSYDDTQSTSSSNQDGQD--PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSD 124
           P LLNCS     +TS +++D QD  PPQEAVLKAISEVSKTEGRVG TTNMV+GGTVT D
Sbjct: 64  PGLLNCSASSGDNTSQASEDEQDQGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDD 123

Query: 125 SSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKG 184
           S+NEWLALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESVIQQPIPEG V+ K+S++G
Sbjct: 124 SANEWLALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPIPEGHVKQKVSSRG 183

Query: 185 KYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           KY+SVNIGPVQV+SSEQVQAVYNAM+RDDRMKYFL
Sbjct: 184 KYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 217

[Close]

BLAST of CsaV3_5G030240 vs. TrEMBL
Match: tr|A0A2R6QRD7|A0A2R6QRD7_ACTCH (Fibrous sheath-interacting protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14289 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.3e-68
Identity = 145/210 (69.05%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 5   RTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSKPT-L 64
           RTM R  ++FLTEP RPL  + SS S+S      S     +   R    R FHF++ T L
Sbjct: 4   RTMFR--TVFLTEPWRPLPCNRSSFSTSFATLKSSIPTSSFA-CRIDRPRNFHFARRTHL 63

Query: 65  LNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSSNEW 124
           +NC +++T S+SS  +  Q PPQEAVLKAISEVSKTEGRVG TTN+V+GGTVT DS+NEW
Sbjct: 64  VNCFHNETPSSSSEEELDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEW 123

Query: 125 LALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKYISV 184
           +ALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+QQPIPEG+V+HKLS++GKY+SV
Sbjct: 124 VALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQQPIPEGRVKHKLSSRGKYVSV 183

Query: 185 NIGPVQVISSEQVQAVYNAMKRDDRMKYFL 214
           NIGPVQV+SSEQVQAVYNAM+RDDRMKYFL
Sbjct: 184 NIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 210

[Close]

BLAST of CsaV3_5G030240 vs. TrEMBL
Match: tr|M5XFF5|M5XFF5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G225400 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.9e-68
Identity = 146/202 (72.28%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 12  SIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSKPTLLNCSYDDT 71
           S  L E  RP+H +  SS+S+S RT    S RL    R    RGFHF+K T LNCS++  
Sbjct: 9   SALLIEACRPVHLT-RSSASASFRTRGFPSPRLNGQFR---TRGFHFAKRTHLNCSHN-- 68

Query: 72  QSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSSNEWLALDQKVN 131
           ++ SS ++D Q PPQEAVLKAISEVSKTEGRVG TTN+V+GGTVT DS+NEWLALDQKVN
Sbjct: 69  ENASSLSEDEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEWLALDQKVN 128

Query: 132 SYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKYISVNIGPVQVI 191
           SYP VRGFTAIGTGGDDFVQ+MVVAVESVIQQP+PEG VR K+S++GKY+SVNIGPVQVI
Sbjct: 129 SYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPVPEGHVRQKVSSRGKYVSVNIGPVQVI 188

Query: 192 SSEQVQAVYNAMKRDDRMKYFL 214
           SSEQVQAVYNAM+RDDRMKYFL
Sbjct: 189 SSEQVQAVYNAMRRDDRMKYFL 204

The following BLAST results are available for this feature:

BLAST of CsaV3_5G030240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655558.1	5.0e-112	100.00	PREDICTED: uncharacterized protein LOC101214536 [Cucumis sativus] >KGN51668.1 hy...	[more]
XP_008446030.1	5.9e-105	93.98	PREDICTED: uncharacterized protein LOC103488883 [Cucumis melo]	[more]
XP_022151740.1	1.3e-91	83.10	uncharacterized protein LOC111019651 isoform X1 [Momordica charantia]	[more]
XP_022966813.1	3.7e-91	83.57	uncharacterized protein LOC111466408 [Cucurbita maxima]	[more]
XP_022945039.1	6.4e-91	83.57	uncharacterized protein LOC111449401 [Cucurbita moschata]	[more]

BLAST of CsaV3_5G030240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27385.4	1.3e-53	58.50	unknown protein	[more]

BLAST of CsaV3_5G030240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G030240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPY6\|A0A0A0KPY6_CUCSA	3.3e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589360 PE=4 SV=1	[more]
tr\|A0A1S3BDM1\|A0A1S3BDM1_CUCME	3.9e-105	93.98	uncharacterized protein LOC103488883 OS=Cucumis melo OX=3656 GN=LOC103488883 PE=...	[more]
tr\|A0A2C9USL8\|A0A2C9USL8_MANES	1.8e-70	70.23	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G011000 PE=4 SV=...	[more]
tr\|A0A2R6QRD7\|A0A2R6QRD7_ACTCH	2.3e-68	69.05	Fibrous sheath-interacting protein OS=Actinidia chinensis var. chinensis OX=1590...	[more]
tr\|M5XFF5\|M5XFF5_PRUPE	2.9e-68	72.28	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G225400 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027471	YbeD-like_sf
IPR007454	UPF0250

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G030240.1	CsaV3_5G030240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007454	Uncharacterised protein family UPF0250	PFAM	PF04359	DUF493	coord: 131..213 e-value: 3.0E-18 score: 66.2
None	No IPR available	GENE3D	G3DSA:3.30.70.260		coord: 126..213 e-value: 6.6E-8 score: 34.9
None	No IPR available	PANTHER	PTHR34782:SF1	SUBFAMILY NOT NAMED	coord: 31..213
None	No IPR available	PANTHER	PTHR34782	FAMILY NOT NAMED	coord: 31..213
IPR027471	YbeD-like domain superfamily	SUPERFAMILY	SSF117991	YbeD/HP0495-like	coord: 127..213

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G030240	CSPI05G21380	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G030240	Cucsa.075740	Cucumber (Gy14) v1	cgycucB076
CsaV3_5G030240	CmaCh18G006920	Cucurbita maxima (Rimu)	cmacucB0495
CsaV3_5G030240	CmaCh04G018390	Cucurbita maxima (Rimu)	cmacucB0886
CsaV3_5G030240	CmoCh18G006300	Cucurbita moschata (Rifu)	cmocucB0488
CsaV3_5G030240	CmoCh04G019360	Cucurbita moschata (Rifu)	cmocucB0875
CsaV3_5G030240	Cp4.1LG09g05890	Cucurbita pepo (Zucchini)	cpecucB0051
CsaV3_5G030240	Cp4.1LG01g16120	Cucurbita pepo (Zucchini)	cpecucB0544
CsaV3_5G030240	Carg19254	Silver-seed gourd	carcucB0331
CsaV3_5G030240	Cla022960	Watermelon (97103) v1	cucwmB458
CsaV3_5G030240	MELO3C011862	Melon (DHL92) v3.5.1	cucmeB381
CsaV3_5G030240	ClCG11G013620	Watermelon (Charleston Gray)	cucwcgB375
CsaV3_5G030240	MELO3C011862.2	Melon (DHL92) v3.6.1	cucmedB375
CsaV3_5G030240	Cla97C11G219540	Watermelon (97103) v2	cucwmbB373
CsaV3_5G030240	Bhi07G001535	Wax gourd	cucwgoB523

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G030240	Silver-seed gourd	carcucB0730
CsaV3_5G030240	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G030240	Cucurbita maxima (Rimu)	cmacucB0218
CsaV3_5G030240	Cucurbita moschata (Rifu)	cmocucB0206
CsaV3_5G030240	Cucurbita pepo (Zucchini)	cpecucB1030
CsaV3_5G030240	Bottle gourd (USVL1VR-Ls)	cuclsiB393