CmaCh04G018390 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Phosphoribosylformylglycinamidine synthase 1
Location	Cma_Chr04 : 9269919 .. 9275075 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGGGCCGTGGAAAGAAAAATATCTCTGCTCCTGATTTCGCGTACTGCAAGCTATTCTGTAAGGTCAATTCAAAATAGACAACCAGAAATGGCCGCAAGCCGGACTGTGTTGCGTTCTGCGACAATATTCTTAACGGAGCCATCGCGGCCCGTTCTCGTTGGCCGTGCTTCTTCCTCCTTCTCGCTCGGAACCAGGCGAACGTTCACTCACAGATTGTATTGCATTTCGTGGAACACTAGGGCTCGAGGATTTCTCTTTCCGAAACGAACTGTTCTGACTTGCTCCTACGATGAAACTCAATCGACGTCGTCGTCTAATCAGGACGACCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGGTTTCTACCTGACCTTTATGCTACCAAGGCTTTGGAATTGTAAGCAATAAATCAATTAATTTCAGGCATCACCTCTTCTTATACACAAGTCTGTATAATTCCTTGTGTGAGCTTCTGCTTGTTCATGATTATATTTCACTACGACTTTTGTTTATCTACGCGACATAATTGATTGCGAGTTCGTTTGGTTTCTCGACGCAGAGGTATCCAAGACAGAAGGGAGGGTTGGCCATACTACAAATATGGTACTTGGAGGAACAGTGACTGATGATTCTTCCAATGAGTGGATCGCTTTGGATCAAAAGGTATGGAACAGTTGCTCCATTAGCTCCAATTTATGTACAGAATGGCTGCTTCAAATCTTTTGATGGTTGCGTGTGTAGGTAAACTAGTATTGGCTTTGCTGCAATTAGAAATAAGTAGAAGATAGCTCTATCTTTTCACCATCACCTTATAGTTTGCTTGATTATTGGAAAGGTGAACTCGTACCCGGGCGTTAGAGGTTTTACGGCAATTGGAACTGGGGGAGATGATTTTGTGCAGTCTATGGTTGTTGCTGTGGAGTCTGTCCTCCAAAAGCCAATTCCTGAGGTGATTATTTTCAGTTTCTTAGGTCAATTTAAATTACAAAATCTATCATTCACTCTATTCCGCAGATGTCTCATTATATGATGCCTTATATATGTGGAATTTCTAAGAAATTGAAATTCATGCCTAGCATTTTTGCTTAAGAAAAGCACTCGAACAGTCTTTTTCTTGCTAGTTTGGGGACAGCTGGTTTGGGAACAGTGCAGTTATTGACGAAATTAGGCAAGATAGTGGGAAACATAGTCTTTCTGATTAATTTCAGGTATAAAATCTTGCACAAAATGACCTGATAATCTAAATTGGAAGACGTAACCTAATCTAATTGGATTTTTAATTCTGCAATTGTTGAAAACTGCAACTAGTTTACACAAAGAAAGCTCTTGTACTTCAAATTATAAGAGCTTGGTTTGGCTCTGGCTTGAAAGAAACAGTAGGATCTTCGGACTTCAACAACAAAAAACCTCTAGGAGCTTTGTGGACCATTATATTTTTGTAGCTCTTTTTTTAGAATAAATGGTTTGATTCTTTGACATAAACGGTTTACATGACTTTCTGACAATTGGAAGGCGTGGGTCTTGTCTTTCCTCCCCATTCATCTTATCCATGAAACCGTTACTCACACACAACAAAGTGAAGTTTACACCAAGAAAGAGAGGGAGTCTAAGTGGTGATTTAATTTTTTTTAATCTTATTTTAGATTGGAAATTGTTGGTATTTATGGTAAGACCACGTCCCTATTGAAGTAGAGTACATAATTCCTCAAGTTTATGCCATATGAGGTTGTAGGCAGTTGTTTAAGAAACCAAAAAGAAGGGCCTAGAGCAAAGACTTGTTATTGAGAAGGCTTATGTCAAGGTATTGCATGGTGGCTTTGGCAAAAAATAGATATCTTGGATTCTTTTGGGTGCTAGTATTTACTGCCAATTTCTCAGCTGTGCTCATAGAAGATTAGATGTTTGGGTGCTTGTCTATCTTGTCGCATCATACCTTTCCTTTTCCCTTCTCTCTTATTGGCGATCGATTATTTTAGTTAGATTCTTTGTACAAGGGAATTAAGTTGGTATTCTTGGTGGCTTTGTGGTTAGGAGATTTTATTAGATTTTTCTCGAAGATTGGTTCGTTAAAACCTCCAATTTATTCAAGGGCATCAAATTCTTTCAACATCCATTCGGGCATACAATCAATTTATCGAGATGAGTCATCATAGGTGAACTGCTCTCTTCTTTGGAGTTAAGTACACTGGATCTAGGTGTAGCTTCATCATTGTAGGTTTAGTTTAGAAAATTCAAAACTGTTGTATCAGTTATTTTATGCTTCACAACCACACTGCTCAAGTACCAAATATTAATTAGGTGAAATTAAGGCCCAACAATTGCCATTTCTTTCAAATTTCAAATTTTGCAAGGATTCATGAGAGATCTGATGGCTGATACCTTCGTGTGAGCTTCTCCAATCCCCTTATAAAACTATTTCTGAGTGCGGGAATGACATTAAGTTTTGTTAGTTTAGAGATTCAGGAGTGGATTTCTCTTTTGTGTGGTTGGATGGTACTTTTTTTCATTGACTCGTTGGATTGTGAATGGGAAAGGGGAGAATTCGAGGATGTTTTTTACTGCTATTTGGAGAACTGACTTCTCCTAGAAAGTTAAAGGTTTTAAGACTATTCTTTTTTGGGATACATAATGAATCAGTGTGTGAATCCCTTTAATTTGAGCAGCCTCATGAATCCCTTTAATTTTATCTTATCATGTAGAAAAGATAAAGGAAATTGTTGATAACCTTTCCATATAGTTTAGAGAAGAAGAATAATAATATTATTGTATTTCTTCTTATTCATCTAAAACAAATACAAGGCCTTCTTATATAGAAAAAAAGACCATCAATCAAGAAGGAAAGAAATATTACAAATATACAGAAGGAATATATACATAATATACAATCAATATTATAAAAGATATAAATGAAATTAAACAGAATTAATTTCGCAATATATTTTTTGGAGTCTGTTTAATGTTTGTAGCAGGCTTCTTTTCTCTATGATTGCATGCCAGTCCTTTCAAAGATAAGGTTGAATATTACTGCGTAATGCTTTTAGAGGTTTCTTTTAGAAGACTTCGTTGCAAAAAGAATAGGAGAATCTTTCAGATGCTGATAGAAGTTGATAAATGTGTAATGGAAGAGTTTTAGGATGATTTGCTTTTTGTTTCTTCATCATCAAGCTCTTTACTCTCCTTCTCGCAACTACTCTTTTTTCTGCTCTTTGTACGACTTTCAAGATCTGTTTCTTTTCTTTTCTTTATTTTCCTCTTCGACGGCTGCCCTTTGTGCATTGCATTCACTTAATTATAGGAAAATTGACAGAATAGGAGGAACGAGGGAACGTATGTAAAAGCTAATCCAAGTAACTAGTGTGTGACAAAGAGACCCACTACTTCATTTGGTTGCAAAGGTTTAACATGATTAGATTTTTTTCATAAGTCTAAACTAGCACGAACTAGGAAGATTCTTGACGAAAGGAATAGAGCGCTGCTCAGAGGCAATCAATTTAATTTATTCTGATAAAAAATAACCTCCTATTGTTCTTTGGGTAATCAAGCGGCACGTGGGGTTGTTGCCACCAAGTCTCTTGCAGGCGGCAAGGGCCGACGAAGTAACAGATTATCTTTCGGTGATTTAACGTAATCTTCGTGAACACACCATTATGGTTTTTCATTGAAGAATTAGAAACACAGTGTCTATATATCTCAAATGGATCATTAGAAGGGGGGAGTGAGGAGGAATTATATGAAAGAAATTGAACATTTAGTTTTTTGCAAACACAATTTCTCTGGCGAGTGAACTGTGTCAGGGGGTTACTGCTAAATCAGACAGTAGAAGTATGTGCTTGATGTAGTAGGATAACAAAATGCTGACGGCAAAACTCCAAATTTCCATTAGGGGAACGAGGTAGATCCCTGCGAATATTGATGGTTGAAGCGTTAAAAAAGTGGACCTACTCTATTTTGTCCTTGAAATCAATGAAGTTCTATTAGCCCCCACCATCTTTACCCTGCAGGTTAATTTTTACGCGTAGGGGTTTATTTTGTTATTGTTAGTTCCTTTGTTTTCAGTAATTTCTGTACATTGCTTATATATAGGCATCAATATTCAATTCTTTCATGAAATCATATACAGAGAATTTTCCATCTCTGGTTTATTAATAGTCTCCAAAAATCTGCAACAAGTCGTTATTTGGGAATGAATTTTCAATCATAGATAAATGGATTGGCTCCGATTCAATGGGATGATAGTATGGAGATTTGTTCCTGTATTTGATTGGCTTGCTAAAAAAAAATAATGTCCATGTCCATGTACAGGGCAAGGTGAGGCATAAATTATCGGCAAAAGGGAAGTACGTCTCAGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTGCCTCTCTTTTCTCTCTTATTAATTTGTTCATCAATGATGCCTTACAGTTTGTTAGCATAGCATGTCCTCCACCCCCAACACAAACACGATTGGTTACAGTGCTTCTTGATTTGGTCGACCATACTCACAATTAATAAACTATCTCATTTGGTTAAGGTATATATCTTTGATTCAAAATGTAAGAAGTTCGAATCTCCCACCCATGTACCCTCTTTTTTAATCTTGTCCTAGATTCAACTGTTGCTATTAAAATCTAAGTTCGGATTCAACTGTGGCATGATTTAGAATAAAGAAGTTCGAAGATTGAAGAAAATTTTGTAAAAAAATCTAAAATGATTTTTTGTGCTTTCCCGTTCCAGGTTCAAGCCGTGTACAACGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAGAATTAGGGTTCACTACTTGTACAACTCCATGTAATGTAATCACTCTTATCCTTTAGAAACCTTGATTATTCCACTTAAAAGCTCTCTAATTTCACTTAATTTTTTCTTAATCTCTCTGACTTCCATCTTATACTTAAAAATATCCAAACCCAACTACCCTTTATCGTGTTTAATATATTACACCCTTAGTCGCTCCCCACTTTGCCTTGTTTGCTAGCCTGTTGTTGATAAGCCTTCGTTTCAAAATTTTGAATAAAGCATTTGGTTACCACAGCACCAGACAAACACACCATCTTGTCTTTTATGTGTACCCTTCTTTTTCTTCCAATTTGAACGTTTG

mRNA sequence

ATTAGGGCCGTGGAAAGAAAAATATCTCTGCTCCTGATTTCGCGTACTGCAAGCTATTCTGTAAGGTCAATTCAAAATAGACAACCAGAAATGGCCGCAAGCCGGACTGTGTTGCGTTCTGCGACAATATTCTTAACGGAGCCATCGCGGCCCGTTCTCGTTGGCCGTGCTTCTTCCTCCTTCTCGCTCGGAACCAGGCGAACGTTCACTCACAGATTGTATTGCATTTCGTGGAACACTAGGGCTCGAGGATTTCTCTTTCCGAAACGAACTGTTCTGACTTGCTCCTACGATGAAACTCAATCGACGTCGTCGTCTAATCAGGACGACCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGAGGTATCCAAGACAGAAGGGAGGGTTGGCCATACTACAAATATGGTACTTGGAGGAACAGTGACTGATGATTCTTCCAATGAGTGGATCGCTTTGGATCAAAAGGTGAACTCGTACCCGGGCGTTAGAGGTTTTACGGCAATTGGAACTGGGGGAGATGATTTTGTGCAGTCTATGGTTGTTGCTGTGGAGTCTGTCCTCCAAAAGCCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCGGCAAAAGGGAAGTACGTCTCAGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTTCAAGCCGTGTACAACGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAGAATTAGGGTTCACTACTTGTACAACTCCATGTAATGTAATCACTCTTATCCTTTAGAAACCTTGATTATTCCACTTAAAAGCTCTCTAATTTCACTTAATTTTTTCTTAATCTCTCTGACTTCCATCTTATACTTAAAAATATCCAAACCCAACTACCCTTTATCGTGTTTAATATATTACACCCTTAGTCGCTCCCCACTTTGCCTTGTTTGCTAGCCTGTTGTTGATAAGCCTTCGTTTCAAAATTTTGAATAAAGCATTTGGTTACCACAGCACCAGACAAACACACCATCTTGTCTTTTATGTGTACCCTTCTTTTTCTTCCAATTTGAACGTTTG

Coding sequence (CDS)

ATGGCCGCAAGCCGGACTGTGTTGCGTTCTGCGACAATATTCTTAACGGAGCCATCGCGGCCCGTTCTCGTTGGCCGTGCTTCTTCCTCCTTCTCGCTCGGAACCAGGCGAACGTTCACTCACAGATTGTATTGCATTTCGTGGAACACTAGGGCTCGAGGATTTCTCTTTCCGAAACGAACTGTTCTGACTTGCTCCTACGATGAAACTCAATCGACGTCGTCGTCTAATCAGGACGACCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGAGGTATCCAAGACAGAAGGGAGGGTTGGCCATACTACAAATATGGTACTTGGAGGAACAGTGACTGATGATTCTTCCAATGAGTGGATCGCTTTGGATCAAAAGGTGAACTCGTACCCGGGCGTTAGAGGTTTTACGGCAATTGGAACTGGGGGAGATGATTTTGTGCAGTCTATGGTTGTTGCTGTGGAGTCTGTCCTCCAAAAGCCAATTCCTGAGGGCAAGGTGAGGCATAAATTATCGGCAAAAGGGAAGTACGTCTCAGTAAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTTCAAGCCGTGTACAACGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAG

Protein sequence

MAASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKRTVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL

Homology

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BLAST of CmaCh04G018390 vs. TrEMBL
Match: A0A0A0KPY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589360 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.6e-90
Identity = 175/213 (82.16%), Postives = 190/213 (89.20%), Query Frame = 1


Query: 1   MAASRTVLRSATIFLTEPSRPVLVG-RASSSFSLGTRRTFTHRLYCISWNTRARGFLFPK 60
           MA +RT+ RS +IFLTEPSRP+     +SSS S+ T R+F+HRLYC +    ARGF F K
Sbjct: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60

Query: 61  RTVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSS 120
            T+L CSYD+TQSTSSSNQD Q PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVT DSS
Sbjct: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKY 180
           NEW+ALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+Q+PIPEGKVRHKLSAKGKY
Sbjct: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           +SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

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BLAST of CmaCh04G018390 vs. TrEMBL
Match: M5XFF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011594mg PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-71
Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKRTV 62
           A RT LRSA   L E  RPV + R+S+S S  TR   + RL   +   R RGF F KRT 
Sbjct: 2   ACRTALRSA--LLIEACRPVHLTRSSASASFRTRGFPSPRL---NGQFRTRGFHFAKRTH 61

Query: 63  LTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNEW 122
           L CS++E  + SS ++D+QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTVTDDS+NEW
Sbjct: 62  LNCSHNE--NASSLSEDEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEW 121

Query: 123 IALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVSV 182
           +ALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+Q+P+PEG VR K+S++GKYVSV
Sbjct: 122 LALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPVPEGHVRQKVSSRGKYVSV 181

Query: 183 NIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           NIGPVQVISSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 NIGPVQVISSEQVQAVYNAMRRDDRMKYFL 204

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BLAST of CmaCh04G018390 vs. TrEMBL
Match: D7TAY6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03660 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.4e-69
Identity = 152/211 (72.04%), Postives = 170/211 (80.57%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTR-RTFTHRLYCISWNTRARGFLFPKRT 62
           A RT+LRS  +FLTEP RPV   R S    L TR  + + RL C     RAR      RT
Sbjct: 2   ACRTMLRS--VFLTEPWRPVHSNRVSVFPPLCTRGSSSSRRLNCECRIARAR------RT 61

Query: 63  VLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNE 122
           +++CS  ET S+    QDDQGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTVTDDS+NE
Sbjct: 62  LVSCSNGETPSS----QDDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNE 121

Query: 123 WIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVS 182
           W+ALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESVLQ PIPEG V+ KLS++GKYVS
Sbjct: 122 WLALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVLQHPIPEGHVKQKLSSRGKYVS 181

Query: 183 VNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           VNIGPV+VISSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 VNIGPVRVISSEQVQAVYNAMRRDDRMKYFL 200

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BLAST of CmaCh04G018390 vs. TrEMBL
Match: A0A0D2R8M7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G183300 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-68
Identity = 150/216 (69.44%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTF---THRLYCISWNTRARGFLFPK 62
           A  TVLRS  +  TEP RP+   R  +S S+ T R+F   T +  C     R R   F K
Sbjct: 2   ACMTVLRSVPV--TEPWRPLQ--RNGNSHSVKTLRSFEISTAKRGCRGAVVRVRNLHFWK 61

Query: 63  RTV-LTCSYDETQSTSSSNQDD--QGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTD 122
           RT  L CS +ET  +S+S +DD  QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTV D
Sbjct: 62  RTQKLNCSDNETSPSSTSEEDDLEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVAD 121

Query: 123 DSSNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAK 182
           DS+NEW+ALDQKVNSYP VRGFTAIGTGGDDFVQ+M+VAVESV+Q+PIPEG+VR KLS++
Sbjct: 122 DSTNEWLALDQKVNSYPTVRGFTAIGTGGDDFVQAMIVAVESVIQQPIPEGRVRQKLSSR 181

Query: 183 GKYVSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           GKYVSVNIGPVQV+SSEQVQAVYNAMKRDDRMKYFL
Sbjct: 182 GKYVSVNIGPVQVVSSEQVQAVYNAMKRDDRMKYFL 213

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BLAST of CmaCh04G018390 vs. TrEMBL
Match: A0A061EC32_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008816 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.0e-67
Identity = 152/219 (69.41%), Postives = 174/219 (79.45%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTF----THRLYCISWN--TRARGFL 62
           A RTVLRS  IF+TEP RP+   R  +  SL T R+F      R  C       RAR   
Sbjct: 2   ACRTVLRS--IFVTEPWRPL--HRNGNFRSLKTLRSFGISAAKRRSCGGHGMVVRARDIH 61

Query: 63  FPKRTV-LTCSYDETQSTSSSNQDD--QGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGT 122
           F KRT  L CS++ET S+S+S + D  QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGT
Sbjct: 62  FWKRTQKLNCSHNETPSSSTSEEGDLDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGT 121

Query: 123 VTDDSSNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKL 182
           V DDS+NEW+ LDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+Q+PIPEG+VR KL
Sbjct: 122 VADDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPIPEGRVRQKL 181

Query: 183 SAKGKYVSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           S++GKYVSVNIGPV+V+SSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 SSRGKYVSVNIGPVRVVSSEQVQAVYNAMRRDDRMKYFL 216

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BLAST of CmaCh04G018390 vs. TAIR10
Match: AT1G27385.4 (AT1G27385.4 unknown protein)

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-55
Identity = 125/222 (56.31%), Postives = 154/222 (69.37%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTF----------THRLYCISWNTRA 62
           A +T+LRS  +F++E  R           + G RR F           H L+    +   
Sbjct: 2   ACKTILRS--VFVSESRR-----------TSGARRCFFLPPSPASVPVHGLFPAPKSLCF 61

Query: 63  RGFL-FPKR-TVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVL 122
            GF   P+R T L CS+++        Q DQGPPQEAVLKAIS VSKT+GRVG TTNM++
Sbjct: 62  NGFASVPERATRLNCSHND--------QSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMII 121

Query: 123 GGTVTDDSSNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVR 182
           GGTV DDS+ +W+ LDQKVN+YP  RGFTAIGTGG+DFV +MVVAVESV+ + IPE  V+
Sbjct: 122 GGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVK 181

Query: 183 HKLSAKGKYVSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
             LS+KGKYVSVNIGP+QV+SSEQVQAVYNAM+RD+RMKYFL
Sbjct: 182 QTLSSKGKYVSVNIGPIQVVSSEQVQAVYNAMRRDERMKYFL 201

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BLAST of CmaCh04G018390 vs. NCBI nr
Match: gi|659090464|ref|XP_008446030.1| (PREDICTED: uncharacterized protein LOC103488883 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 178/216 (82.41%), Postives = 191/216 (88.43%), Query Frame = 1


Query: 1   MAASRTVLRSATIFLTEPSRPVLVG----RASSSFSLGTRRTFTHRLYCISWNTRARGFL 60
           MAA+RT+ RS +IFLTEPSRP+        +SSS SL T R+FTHRLYC +    ARGF 
Sbjct: 1   MAAARTMSRSLSIFLTEPSRPLHFSPPSSSSSSSSSLRTNRSFTHRLYCNARRINARGFH 60

Query: 61  FPKRTVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTD 120
           F K T+L CSYD+TQSTSSSNQD Q PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVT 
Sbjct: 61  FSKPTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTS 120

Query: 121 DSSNEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAK 180
           DSSNEW+ALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+Q+PIPEGKVRHKLSAK
Sbjct: 121 DSSNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAK 180

Query: 181 GKYVSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           GKY+SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 GKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 216

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BLAST of CmaCh04G018390 vs. NCBI nr
Match: gi|778704582|ref|XP_011655558.1| (PREDICTED: uncharacterized protein LOC101214536 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 8.0e-90
Identity = 175/213 (82.16%), Postives = 190/213 (89.20%), Query Frame = 1


Query: 1   MAASRTVLRSATIFLTEPSRPVLVG-RASSSFSLGTRRTFTHRLYCISWNTRARGFLFPK 60
           MA +RT+ RS +IFLTEPSRP+     +SSS S+ T R+F+HRLYC +    ARGF F K
Sbjct: 1   MAVARTMSRSLSIFLTEPSRPLHFSPSSSSSSSIRTNRSFSHRLYCNARRINARGFHFSK 60

Query: 61  RTVLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSS 120
            T+L CSYD+TQSTSSSNQD Q PPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVT DSS
Sbjct: 61  PTLLNCSYDDTQSTSSSNQDGQDPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTSDSS 120

Query: 121 NEWIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKY 180
           NEW+ALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESV+Q+PIPEGKVRHKLSAKGKY
Sbjct: 121 NEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVIQQPIPEGKVRHKLSAKGKY 180

Query: 181 VSVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           +SVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL
Sbjct: 181 ISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213

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BLAST of CmaCh04G018390 vs. NCBI nr
Match: gi|645230939|ref|XP_008222163.1| (PREDICTED: uncharacterized protein LOC103322074 [Prunus mume])

HSP 1 Score: 278.9 bits (712), Expect = 7.5e-72
Identity = 152/210 (72.38%), Postives = 174/210 (82.86%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKRTV 62
           A RT LRSA   L E  RPV + R+S+S S  TR   + RL   S   R RGF F KRT 
Sbjct: 2   ACRTALRSA--LLIEACRPVHLTRSSASASFRTRGFSSPRL---SGQFRTRGFHFAKRTH 61

Query: 63  LTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNEW 122
           L CS++E  + SS ++D+QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTVTDDS+NEW
Sbjct: 62  LNCSHNE--NASSLSEDEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEW 121

Query: 123 IALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVSV 182
           +ALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+Q+P+PEG VR K+S++GKYVSV
Sbjct: 122 LALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPVPEGHVRQKVSSRGKYVSV 181

Query: 183 NIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           NIGPVQVISSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 NIGPVQVISSEQVQAVYNAMRRDDRMKYFL 204

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BLAST of CmaCh04G018390 vs. NCBI nr
Match: gi|596188921|ref|XP_007223460.1| (hypothetical protein PRUPE_ppa011594mg [Prunus persica])

HSP 1 Score: 276.9 bits (707), Expect = 2.9e-71
Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNTRARGFLFPKRTV 62
           A RT LRSA   L E  RPV + R+S+S S  TR   + RL   +   R RGF F KRT 
Sbjct: 2   ACRTALRSA--LLIEACRPVHLTRSSASASFRTRGFPSPRL---NGQFRTRGFHFAKRTH 61

Query: 63  LTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNEW 122
           L CS++E  + SS ++D+QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTVTDDS+NEW
Sbjct: 62  LNCSHNE--NASSLSEDEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVTDDSTNEW 121

Query: 123 IALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVSV 182
           +ALDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+Q+P+PEG VR K+S++GKYVSV
Sbjct: 122 LALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPVPEGHVRQKVSSRGKYVSV 181

Query: 183 NIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           NIGPVQVISSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 NIGPVQVISSEQVQAVYNAMRRDDRMKYFL 204

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BLAST of CmaCh04G018390 vs. NCBI nr
Match: gi|1009152796|ref|XP_015894290.1| (PREDICTED: uncharacterized protein LOC107428290 [Ziziphus jujuba])

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-69
Identity = 148/211 (70.14%), Postives = 172/211 (81.52%), Query Frame = 1


Query: 3   ASRTVLRSATIFLTEPSRPVLVGRASSSFSLGTRRTFTHRLYCISWNT-RARGFLFPKRT 62
           A RT LRS  + LTEP RP+ + R S   S     + + RL    + T + R F   +RT
Sbjct: 2   ACRTALRS--VLLTEPWRPIHLNRISVCASFRIHGSPSLRLSGGKFRTIKGRDFHHARRT 61

Query: 63  VLTCSYDETQSTSSSNQDDQGPPQEAVLKAISEVSKTEGRVGHTTNMVLGGTVTDDSSNE 122
             +CS++E  S SSS+QD+QGPPQEAVLKAISEVSKTEGRVG TTN+V+GGTV+DDSSNE
Sbjct: 62  RTSCSHNENPS-SSSSQDEQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVSDDSSNE 121

Query: 123 WIALDQKVNSYPGVRGFTAIGTGGDDFVQSMVVAVESVLQKPIPEGKVRHKLSAKGKYVS 182
           W+ LDQKVNSYP VRGFTAIGTGGDDFVQ+MVVAVESV+Q+PIPEG+VR KLS++GKYVS
Sbjct: 122 WLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMVVAVESVIQQPIPEGRVRQKLSSRGKYVS 181

Query: 183 VNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 213
           VNIGPVQVISSEQVQAVYNAM+RDDRMKYFL
Sbjct: 182 VNIGPVQVISSEQVQAVYNAMRRDDRMKYFL 209

The following BLAST results are available for this feature:

BLAST of CmaCh04G018390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G018390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPY6_CUCSA	5.6e-90	82.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589360 PE=4 SV=1	[more]
M5XFF5_PRUPE	2.0e-71	71.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011594mg PE=4 SV=1	[more]
D7TAY6_VITVI	5.4e-69	72.04	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03660 PE=4 SV=...	[more]
A0A0D2R8M7_GOSRA	2.7e-68	69.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G183300 PE=4 SV=1	[more]
A0A061EC32_THECC	1.0e-67	69.41	Uncharacterized protein OS=Theobroma cacao GN=TCM_008816 PE=4 SV=1	[more]

BLAST of CmaCh04G018390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27385.4	3.0e-55	56.31	unknown protein	[more]

BLAST of CmaCh04G018390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090464\|ref\|XP_008446030.1\|	1.2e-90	82.41	PREDICTED: uncharacterized protein LOC103488883 [Cucumis melo]	[more]
gi\|778704582\|ref\|XP_011655558.1\|	8.0e-90	82.16	PREDICTED: uncharacterized protein LOC101214536 [Cucumis sativus]	[more]
gi\|645230939\|ref\|XP_008222163.1\|	7.5e-72	72.38	PREDICTED: uncharacterized protein LOC103322074 [Prunus mume]	[more]
gi\|596188921\|ref\|XP_007223460.1\|	2.9e-71	71.90	hypothetical protein PRUPE_ppa011594mg [Prunus persica]	[more]
gi\|1009152796\|ref\|XP_015894290.1\|	2.0e-69	70.14	PREDICTED: uncharacterized protein LOC107428290 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007454	UPF0250
IPR027471	YbeD-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018390.1	CmaCh04G018390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007454	Uncharacterised protein family UPF0250	PFAM	PF04359	DUF493	coord: 130..212 score: 2.4
IPR027471	YbeD-like domain	GENE3D	G3DSA:3.30.70.1460		coord: 126..212 score: 2.0
IPR027471	YbeD-like domain	unknown	SSF117991	YbeD/HP0495-like	coord: 127..212 score: 3.27
None	No IPR available	PANTHER	PTHR34782	FAMILY NOT NAMED	coord: 3..212 score: 8.4E
None	No IPR available	PANTHER	PTHR34782:SF1	SUBFAMILY NOT NAMED	coord: 3..212 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018390	Cucsa.075740	Cucumber (Gy14) v1	cgycmaB0126
CmaCh04G018390	Cla022960	Watermelon (97103) v1	cmawmB738
CmaCh04G018390	Csa5G589360	Cucumber (Chinese Long) v2	cmacuB749
CmaCh04G018390	MELO3C011862	Melon (DHL92) v3.5.1	cmameB641
CmaCh04G018390	ClCG11G013620	Watermelon (Charleston Gray)	cmawcgB629
CmaCh04G018390	CSPI05G21380	Wild cucumber (PI 183967)	cmacpiB758
CmaCh04G018390	CmoCh04G019360	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018390	CmoCh18G006300	Cucurbita moschata (Rifu)	cmacmoB707
CmaCh04G018390	Cp4.1LG01g16120	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018390	Cp4.1LG09g05890	Cucurbita pepo (Zucchini)	cmacpeB694
CmaCh04G018390	MELO3C011862.2	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G018390	CsaV3_5G030240	Cucumber (Chinese Long) v3	cmacucB0886
CmaCh04G018390	Cla97C11G219540	Watermelon (97103) v2	cmawmbB735
CmaCh04G018390	Bhi07G001535	Wax gourd	cmawgoB0891
CmaCh04G018390	CsGy5G020900	Cucumber (Gy14) v2	cgybcmaB675
CmaCh04G018390	Carg21224	Silver-seed gourd	carcmaB0971
CmaCh04G018390	Carg19254	Silver-seed gourd	carcmaB0414

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G018390	CmaCh18G006920	Cucurbita maxima (Rimu)	cmacmaB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018390	Cucurbita maxima (Rimu)	cmacmaB189
CmaCh04G018390	Cucurbita moschata (Rifu)	cmacmoB680
CmaCh04G018390	Cucurbita pepo (Zucchini)	cmacpeB756
CmaCh04G018390	Bottle gourd (USVL1VR-Ls)	cmalsiB670