CsaV3_5G028220 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTAAATTAGCAACTTGCTAATTCAACTGAGTACCTTTATGTAAGAATGACTAATTTTGGAATTGTGGTGAAGGATTAGGGTTTGTGAGTTCAGGTGCGAAGCGAGGAAGGAAGAAGATGGAAAATTGTAAATGCAAATTTACTAAGAAAATGAGACGTAGGGTTTTAGAGATTTAGGAGAATGAAATTTAAAGGCCCATTCGGTCCTTTTGATGTAAAGAAACGAAATGGATTAATGAATTTAGATTTCTCATTGGCAAATGTCAAACTTTTCCAAAATTCCACCCAAATTTTCTCATTTGCACATATGCTTCTACTTCTTTTTAAATATGTTATAGATATACATTTTTAAGTTTACATGACAAAATGTGATAATTAAATTTGGTAAAAAAATTGTTACAAACCTAAAAATAAAGAGACTATATTGTTACATATTGAAAGATAAAATATTTTATTTTTGTAAGTTTAAAATCGTAAAAGCTAAATAGTTAGAAATAAATATTGAAGGTTAAAATTTTTAGATGATAATGTTTAACAAACAAATTTTGAAAAATTAATGATGATAATCTAATAAAGAGCCATATGTATTAAATTTAACTATAGTTCAAATTTGGTTGATGTAAATTTATGGAAACCATTAGAAGTTTAGATCATCCACTTGAGATAGTGGAAAATAGTAAAAGGTTTTAATCGTGTCACTTAAACTTAAATTATATATTGACAGACTACCAATAAACATAATTTGATGGTTTACTTAAATTTAGATTAAGCATGTAACTTGTTTCATAGGTAGAAGCTCAAACTACTTTTTTATTATTCTAAATTGTCCTGTAGTTCTAACTTCTAAGTTTAAATGTTGGTATTTTACTACAAGTAAAATAATCAAATGGCAGCTTGTATTTCAATATATTTAGTAGGATTATTATTTTAAGTAATAATATATTTTGATAATTAATTACTAATCATATGAATCGTGGATGTAAAAAATAATTAATTAAGGAATGAGTGGAACTTCAAGATATAAAAATAACATGGTAAAACAAACAATTAACTTTATTTAATATCGTGAAAGATCGACTTGATTATATCTATTAGAACTATAAATATATAGACTTCATCCATTATTAAACAATAAATGTTAAATAACACAAGAGTTTAATTAACTAATGAAAATATTGAAAATGTTTGGATTTAACTCAGTGAACTTGCCAAAGGAAAAGAAAAAAGCGTGAGCGGCAGGATTCGAACCTGCGCGGGCAGAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGCCCACTCATTGAGATCCAAGGCAGGCCACATAATAAAAACAAACAATTATTAATAATCAATTCCTAATTATTTATAAAATTATTAGGAAACTCCCCTTTATAACTATTTTGATATATTTTAAAATTTTTATTAATCAATTTTTATGGAGTTCTCTTGAATTTAAGATTTTTAAAAAAAATAAAAGGGTACTGTTATAAAAAAAACCTAATATCTAACCGTAATTCTTTTCAAGAATAATCGAAATATAGCAATTAGATTCAAAGTGATTAAGTATATATCAATATTTTCTAAAAAATTTAAATATAGCAAAAGCGATCCAAATCTATATAAAATTTGTTATATTTATAATTTTGTTTAGATGCCCCTATACACTTAATTATTATTTTTAAAATTGTTATTCCATGTAACATATGTTTAAATATAATTTATTATCTTTTCTTTTTTTTCTAGTATTTAGTTTGGTCTTTATAACAAGAAGAATGTATTATTACACCTATTATTAATCATGTTCGTCTGTATAACAGTGTTTTTTTTTTTTCAGACTTCTTGAAATATCTGATTTGCTCATCTCATTAATAATGAAATTTAATTAGAGATGAGCAAATAAAATGATATCAAATCAGAATAGATTTTATTATTATTATTATTTATATTTAGATTAAATAAGACTTAAACTTATGGCGACGTTCTAATTTCACACTAACATTAAACAATCAACCATACGAAGATTCTACGTTAAGCTTTACCTAGACTCTCTTTGATGCTCATTTTTAACAAGATCTACACACGATAGACAATTTGTGCATAGTTGTTTAAGAAGTATTATCGAGTTGAATATGGAACTAAAGGACTTTCACGCTCGTAAAAGTCCCTAGTCATGACTTTCAAAATTACTCTAATCTTATCTAATTAAACGCTACGTAACCTAAAGTTATCATTAACAACATAGCAAAAAAAAAAAAAGTAAAAAAATTCAAGATAATAAATCCATATCACTATACTTTTTAAATTACAAAAGTAGCAAATTAACAAATTTAAAAGGAGACAGACAATATGCAAAAAAAAAAAAAAAAAAGTTATAAGTTGTTTTTTTCAATCTAATACAATTTTCTTTCGTTTATTTCAAATTTATAACAATTATTTTTCTATGTTTTTATGGGAGAAATAAAAAATATATAATTTGTATTCTAAATTATAAAAATTTTAAACAATTAATTTTTTAAAATACAAATTATTAATTTTTTTTTAAGAAATATAAATATTTTCGTAAAAAAAAATTATCAATTAAACAAAACATACGTAGAAGATGGTTGACAACAGTAAACAAACTAAACAAAAATCTTCATTTAAATTTTCTAAAATTATTTAGTAATATTACTTCCATGGGATCTTATCATGTTTTAAAATATTCAAAAAACATATCATCTTTCAGTTATCCGATTTTTATAACTTCAATTCACTTTTCTGCTCATTTTAAAATTGTCAATGTGAAACCTACATCTCTCTCTTTCTTTTTCTTTTTCTTCTCGAAGAAATACTCAAAATTCTCAAAGAAAAGTTGCATATAAAAACTGAAAGTCGAAGAATGAAGATATTCTTAGTTAATTAATATTGAGGTAACTCTGTATTTTTAGCCTTAATTAAAAGGTAATTTGGACTTTTCATACTCATTTGACTCAAAACTCATTATTTTGAAAAAAAAATGTATCAAAATCCTTTTTCAAAGAAAATCATATTTTTCTCAATTAAAAAAAAACAAAACAAAATTTAAAAAATATTTATAAAGATAATATAATTTCAGATTTTATCTCTTCTCACTTCGAGTCCAACCATTTTTGTTTGTTTGATAAATTTTACTATATTTTATAAATATTTTTGTTATATTATTAGATTTGAAAATATTCTTATTACACAATATAAAAATAAAAACAAGAAAACAAAAACAAACCATTATCTAAAAAAAAAGAAAAAGAACAACGTGAGGAACCAAAGGCTAATTCCCTTCGGAAGGTGTAACTTATGTGACGCAACTAATCTAATAACAAATTTTTGTATGTAACCAAAATCTAATTTTGGAATTGGGTTAAGAATTTTTCACTTTTTTCTTCTTATTCTTTGCGGTATATTCATCGTCTCTTCATATTATTTACTTTTTCTTATTTATATTTTCACTTGTACTTGTTCGTGATTTATTCATTTCACATTGATTTCGTTTCATGGGTAACAACGATGAAAGTTTATGAAACTTTTTATTATACTTTCTATTTTAATTCTGATTATCTCTCAAACGTACAACTTGTATTGTACAGAATCAAATATTGGAACTCCAGTACCAGCCCATCTCAAAAGGTTCTCAACCACTCTCTGGAGACGAGATGTGGGAGACCATTTTGGATAGACGATCATGCTACTAAAAAGGTCTTGGTTGGAGCCTTAAGCTCAAGTCCAGGTTCTGCTTCCACTTATTCCTCCTCTTATGACCACCAAGCACACATGACGGAAGTTAGCAAACTAAAGGTCAGTCATGAAAATGCTAACCGCCTGATTGAAGAACAAAGACTAAGGGAGGAGGAGCGTGACCGTTTGATTGAAGAATAACGACTAAGGGAGGAGGAATGGGACCAACAAATAGCAAAACATGCACGAAAAATGGAAGAGATGAAGAAGATGATCGAGGAGATGAGTTAGGCACAAAGAGAATCATGAACACTTGAAATACGTACTTCTGAAGCATTAAAAGATAGAGGAGGTGGTGGATTAAGCAAAGGATAAAGCATTACCCTACCAGCTTGTTATACCAATATTTCACAGCTAGTTATACCAATTACCAATTACCATAAAACGATTGTAAGAAACATAATTACATTTAACGATAAGACTTGAAATAAAAAAGAGACAGCTGATTTGTTGATGATGGCTAGGAACTCACCCCCAAACTCTCAATGTTCTTCAAATTTAGAACCTGGGGTTCTTTTCTTTTCTTTTTTTTTCTCATTTTCTTCACATTCAGCTAGCTGTGAAATATTGTGGATCCTCTAGTGGCAATTTCTATTTAAACTCTATTTCATGGTACTACTTCTCAAGCTTTGTGGGTTCTCTAGTGAAAGATTTTCTTAATGGGTATTATTAAGTGGGAACACTAGTCAAATATTTTAATTTGGAGGCTTAGAGATTCATATTCCAAACTTTTTTTTAATAGAAAACTATGTTAAGGTTTAGGGTAAACAACTTTTGTGATGAGTGGAAACAAATTAGACTAATACAACATGGTGAAAACTCAATTTTACCTCTAATCTCTCTTGCCATAATTTTAACGATTTTTTGTGTAATTTATTATTTTATTTTCTACACAATTTTTTTTCCTCCTCTCTTAAATTTTAAATGTATACCCAACACTCTTTTTTAATTGTTCCAAATGTATAAACATTAGGTTGATTTAGGATTATTTCAAACTTGTTTGTAATTTTTTTGTTTTTTTTTATCACACCTCTTTTCTAAAGTTGAAATGTTTAATTTTAAATGAACTATATAATTTTGCTTGTATGATGTAGGATGCTTCTATACATGTTTAGAGAAATTTTTAGTTATTTTTCTTTTGTTCCTATATAACAGAAGAAGCAGAATTTGGGAGAAAAGATTTACTGACTGCAGTAAATTCTTTATTTCTGTATGTCAAGGATATTTACATCAACCAAGCTTGTATTTATAGATGCTTGGCAGCAACTGATAACTGTCTAACAGATTAACTAATACAACAGAAAATAACAGATTAACTAATACAACTAATACAACAGAAAATAACAGTCTAACTACTTTTATTGTTAATACTATATGCTCGAGTTATATTTAAATTTGAATATTGAATTTATCCTATTCAATCTAGTTTTCATAACAACAATTTACTTTGAAAGCAACTTAATTCTCTTACCTTGATCACAATGAAACGCCCACGGCTGTACATTTGGCCATGTTTATGAAATGAGTACGGACAAAAAAAATAGAAAAGTTTTCAAATTTAGCAACAAAAAGAAAAAATTAAAAGTATTTACAAAAGAGAGAATAAGTGTGGTACAATATAATCAATTAATAAAACTTAATAAATTTTAACAAAATTAAAATGCTTTGCCAAGGAATAAAAACAAAAACAATATGGCATAAGAATTTTTAGAATAAAGTTTACAACTTAAATAGAATAGAGTGAATAAGACACCCAACTCACGAAAACCCAACTTTTTAAAAATTCATTTTGAAAACTAATCTATGAATTAACACGTAACTTATCATGTATTATTTATGATAGAGACTGTGAGATGATCCATTGTTTTCCACTTTCTATTTTTGCCATAGGGAAAGATTGGTATCAGTTTATCTTTTTGTTTACTGATTTCTCTGTGAAGACTTAGGATCTCAATTTGATAGAAGTGTTTTTTCATTGTTTAACTTAATTTGTTCTCATTTTCAGCTCCGTCCACTAAATAAGACGCAAATCAGTTTTTAATTATTTTATACTTATGTTTTGTTAAGTAATTACTTTTATTAATTTACTCTTCTTTTTTGTCTTATATTTATATTTATAAGGAAACCATTAATATGACAAAAAGAATATGTAGAGAAGACAGTTGATAACATTAATCAACCTAAAAAAAATTATCATTACACTCATCCTTTTCTTTATCTTGTTTTTTTGTTTGGCTAAGCAACCCCCTTTGTTATGGTTCGATTGAATTTTGAAAGATCTTGAGCCGAGTAATGTTGTTAGGATATTTTTTTTTTAAATCTAAACAATTGGTCAACTAATGAGATTTGACTTATAAGCTTAATTTGATTTCACTGATTAAAAAAAAAAAAAAAAAGTCATTTATTCAAAATGTAAACAATTATAGGATGAGTGCAGGTGATCAAAAGGTTTATACTTTAAATCTTCCATTCCTATTACACTGAAAAAAAGGTTCTCATTACAAAAGGAACTGCGTAG ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTCTCATTACAAAAGGAACTGCGTAG ATGGCACTAGAGATGTGTGGGTATGAAATAAACCTAGTGATTCAAAAACAACTTACTGATACGGATTTAAACAAAAACCATGGTCGTTTGTCGATGAACACAAAACTACTATCGTTCGATTTTGCAACCGAGGAAGAGAGCGAGTTACTGAGCGAACAAGAAAATAAGAACAAGAGGGGGATAAACGTAATGGTATTGGACGATGTTCTAGAAGAAAGAATGGTTTGTTTGAAGAAGTGGAAAATTGGAAGTGGAGAAGTTTACTGTTTGATGACACATTGGAATTCGATGGTTGAAAAAAGGGGATTGAAGAGTGGAGAAGAGATTCAAGTTTGGAGCTTCAGAAAAGATGATGAAGATGAAGCTCATCGTCTTTGCTTGGCTTTGGTTCTCATTACAAAAGGAACTGCGTAG MALEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKLLSFDFATEEESELLSEQENKNKRGINVMVLDDVLEERMVCLKKWKIGSGEVYCLMTHWNSMVEKRGLKSGEEIQVWSFRKDDEDEAHRLCLALVLITKGTA
BLAST of CsaV3_5G028220 vs. NCBI nr
Match: XP_004142863.2 (PREDICTED: B3 domain-containing protein At2g31420-like, partial [Cucumis sativus]) HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. NCBI nr
Match: XP_011656245.1 (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN51463.1 hypothetical protein Csa_5G550750 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63 Identity = 122/130 (93.85%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. NCBI nr
Match: XP_011655441.1 (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN51435.1 hypothetical protein Csa_5G544060 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60 Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. NCBI nr
Match: KGN51496.1 (hypothetical protein Csa_5G570410 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 5.4e-59 Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. NCBI nr
Match: XP_016903400.1 (PREDICTED: putative B3 domain-containing protein At3g24850 [Cucumis melo]) HSP 1 Score: 234.2 bits (596), Expect = 2.7e-58 Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TAIR10
Match: AT2G31420.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 82.8 bits (203), Expect = 1.8e-16 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TAIR10
Match: AT3G24850.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 73.9 bits (180), Expect = 8.4e-14 Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TAIR10
Match: AT1G05930.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12 Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TAIR10
Match: AT5G24050.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 68.2 bits (165), Expect = 4.6e-12 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TAIR10
Match: AT1G05920.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. Swiss-Prot
Match: sp|Q9SIC7|Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana OX=3702 GN=At2g31420 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.3e-15 Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. Swiss-Prot
Match: sp|Q9LRX6|Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. Swiss-Prot
Match: sp|Q9MA32|Y1593_ARATH (B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN=At1g05930 PE=2 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11 Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. Swiss-Prot
Match: sp|Q9LSF7|Y3518_ARATH (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 6.4e-11 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. Swiss-Prot
Match: sp|Q9FLV7|Y5405_ARATH (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.3e-11 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TrEMBL
Match: tr|A0A0A0KPD7|A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G550750 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63 Identity = 122/130 (93.85%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TrEMBL
Match: tr|A0A0A0KP87|A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60 Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TrEMBL
Match: tr|A0A0A0KUX9|A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570410 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59 Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TrEMBL
Match: tr|A0A1S4E600|A0A1S4E600_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.8e-58 Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of CsaV3_5G028220 vs. TrEMBL
Match: tr|A0A0A0KSY8|A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570420 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 5.2e-58 Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |