CsaV3_5G025790 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCAATTTTCATAAATATATCAAATTTATCCGTAAAATGAATTCATATTAATAAAAAAAATTGAGAATTCAAGTCCTCCAAAGTTTTGTAATAATAATGGAAAGAAAGAAGCGAGGAATGGGGCGTGGGCCCAGAATGAGGGAAGAGAAAAGCATAAGAATGAGCGCTGTACAGAGTTGACCAAAGATTAGGTCGCCCGCCAACGCCATACAAAATTACAAATATCATAAACATACGTACGCCCCATTTACAAACTACAATTATTTTGATTTTGCATTCAGAAACTGGAAACCAACTAAAGGCGTGTGTCTTGCACGGTGTCGTTTCATCCCTCTTCTCTTCTCTTCTCTCCTCTTCTGCTTTCCTCTGTTTTCGTTTGTAAAATTAAAACTAAATCAAAGCATCTTCTCCTTCCTTCCTTCCTTCCTCCTTTTACTCTGTCTTTCCCTTCACCTACCCTCTTCTCCACAATTCCTTCTTCAATCATCTCCTCTTCCCCCCTTCTCTTTCTCTCTCTCCGATCTCAATCCTTCAGGTACGATCTTGCATTTTCTCTCCGATCTCACTTTTTCCCCTACATTTCTAATTTCTCCCTTTTATTTTCGTTTCTATGTTTCCTGTTGTAAATTTATTCTTTTTTCTCTGCGATCTGACTTTTTTGCTTCACGCGCACGCGTTTTTTTTTTTGGTGAGATTAATGCGTTTTAATTGTTCTGGATTTAATGTTTTGGTTTTTGGTATTTTCTCATCTCTTACCCAAGGATTTAGCTCTGAGTTGATTGTTTTTTTTTTTTTTTTGGAATTGTTTTAGATATATCATGGAATTTAATTGATGATCGTTTTTTCATTTCATCAGTATTGATCAGGTTGAAAGTTGACTTGTTAAACAACTGGGTTTTTTTCGTCTTTTCTTGTAAATTTGAGTTTTTTTCTGTTACTTGTGTCTATAATTACTTGCTGCTTCTCTTGATTGTAGGAGTGCTTACAGTAAGTTGGGCCTCTAGACGAAATAGGCTAAATTCTTTGGTTGACTTTTCTGGGTTTTAGAGCTTTTAATTAAAACCTTCATTCTATGGCTACTATTTCTTTGTGTACTACGTGTGTGTGTGTGTGTGTGTGTGGTTAAAACCTTTTCGGGACCGTTCCATTCTTGTGCAGGTTAGGTTATTGAAGGTACAAATGGATAATTTCCTAGGAGGTTTTACAGAGGACTCTACAACCTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCTTTCCCAGTACCTGTAAGTTTCTTCTTTCTATGAATTTATAATTTAATGCACTTGTTTTGTCAAAGATAAGAAACGAAAATATTAATCTACCCTCTAACAGTTTGTTTTACAAAATACAACATTGGTCAAGGTTCAACTATGGAAAACACATGGAAAATCAGATATGTATCAATGTTTCCATAATTATTGTTACCATATTCCAACGTAATAGGAATAATATTCTTCATGTTTATTTTTATAGTTATTTATAATACTACATAGATATAATTAGGTAGATATTAATTAGTTTTACAAAACTTGACACATGTAAATGTTAGTTTTACTTTTATACTAATTACCTCTTATCATTTAGCTTAGTTATTCTGGTGTACGTGATAGGCTACTTCAATTTCTGGCTAGTCTGACTTAATAGATGAATTATTGGGATGTTTTTGTTTAGTTATTCTCTTATTGCATACTTTACTTTTACCATTTAGCTCTAGAGTTCAGGTATTATATTTGCTTTTCATCTTACAATCTTCAATATAGGTGGTTGTTATGTCTTCCATGGAATTCTTGTAATTTAGTCTTCCATATAATTCTCATGTTTTTCTGAATTTTAGTTAATCTGATAGCTGTTCCTACTCTCTTGATTAGGTACGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTCCATGGACGAGATGGAGTTGTTCCACTCTCTGGAAGATCCATGCATCCAGGGAGCGTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCAGCGAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGTGGTCCCTTCAGTTTTGGTTCATTTTCAGAGAAGTGGAAAAATCAGAAGAAGAAATTCGAGTCATCAAAGAAAGAGTCTTCTTCGCAGGTGATCAATTGTTAATCATCTATGGGTTATTACCATTGAGTACTTTAGCTGTGAGATGAAGAATGATGAAATTTTTATGCTGAGATTCCCGTTATTTGAATTGTTGAAAATTTAGGATGAATGCAATCCGTCCTTATCGTTATGTTCATTTTCAGGGTGGAAATTCACAGCATGAAGCAGTGGGCAATGAGTGGCTGCAAATGGGTAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTTATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGTCCCCAACCGTTGCCAGCAAAAGTCCTTGCAATCGGTCTTCTTGGCATGGCAGCAAATGTACCTCTAGGAATATGGAGAGAACATACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCTAAATCAGCCATGGCATTTACCATTGCAGCGTCAGTTTTAGGGCAGGTTATCGGCTCAAGGGCAGAGCGACTTCGACTCAAGGCAGTGGCTTCGAAAAAACTAACCCTACAAGATTCTCTCACGGAAGCTACCCTTTTGCCGGTGGTTAACATGAAGAATGGTCATTGTGGCGACATAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGTCCAGCTTCACCAAATAAGGTGCCGTGCTGATCTCTTAATCATTTATTACGAGTGTTTTGCTCTGTATCCTAATGAGTGTAATTCTTCGATTATACACCAGTTTGTTCATTTGTTTGGAAGCGTTTTGACAATTCAAAATATAAAATGATGAAATAAAAAGTCTCTCCGTGTGTGTGAACTAAGTCTTGGTGGGGCATTTGTGATAAATTCAATTCAATATAGTCGGCTAAAGCACTCGTTGTTTTAGTTGACCCAAGAAAATTGGGAAGTGTTTTTCCTTCAACCTTCCAATAGTAGATGAAGAAAATGCATGGCAAATAGGCCATAATTACTGTGTTGTATCCCTAATCACTTCATCTTTATTTTATCATGCCAGACCTATGTCTTAGTAAATATTAGTAAGGTCTTTAGGAAGGGCTTAGACAGTAAGTTTGTTAAGGCTTTTAGTTATAAATAGTGGGTGGATTAAGTGGAAGGGAGTGGAGAATTTTGTGAGATTTCATTTAAGAATTAGGAAGATAGTAGCCTTTTTGAAAGGTTATGGTATATTATAGTTTCTTCATTGGTATTACAATATAAATCTATCTTTTAGTGTTCTCTATTTATTCATTGTGTTTATGAGTTCTCTTGCTAGCAGATATCCTAACATGTCTTTAATAGTATGTCAAATTCACAAGCTTATTAAGCTTAGATTATATCAATATCTTGAGATTTTGCAAATGTATCATTTACACAATGCATTATATCTTATTTGGAAGACTTACCTAAATAAATCAATTTAGACTCTTTTGGGAGGATTGTTCATGCCTTTACGCGAACTATTCATTTTGTAAAAACTAATATTTGAAGAAGTATATATACATTTAAGAATTAATATATGAAAGATTTTAAAAAATAACCCTAACTTTAGTTGGCTCAAATCATAAGCTTTAGGAGGTTGAATGAAATTTGATGGATGATGTAAATTGGTAAACTTATGAGAGTTTAGAAAAATTGACACCATCGTAAAGTTTTAAGGGTATAAATTGATAGTTGCCTCTGATTTTATTGTTGATAAATAAATTTATATACAAATTTAAGAATTGTACGCACCTGGATCACCTCAAGTGTTATAAGACTGAATAGAATAAAAACAATGACAATTAAATCAAATAAAGAACTAGAAATATTAAGCAAAATTCATAAAATCATAAATTCAAACATCCTGCTAGATTCTAATGGGTGAAAATTTTGAAACTCTAGGAAGATGACTGTTATGCTCCAATCATCTCAAATGGTAGAATCTTGAATAGAAATGTCTTCCATTGGACTACGTAGGTATCAATCATTTTGCAAGATACACGAGATGAGTTCTCGGAGAAGTTGAAAGTTTTGACGAGTGGCAACCCCCAAGAGAATTCTCATGTTGCTCAAAAATCCGGTGCTATCTTCTTTGCAATGAAAGGTGCCAGCGCAAGCACATTGTTCCCACAAATGAGCAGCTTTATATCGAAAAATGCCGCTTACACTCTCGGAATTATCAATTTAAACTCTAAAGGTTATTTCTACGAAGATTGACAATTATATTTTATTTGGATAAGCATTATGTGAAACTACTAATTTTATGTCACGAAAAGTTGTCCATACATCAAATCTAAAGGTATATTTTGTCAATACAACATTTGAAGAAGTTACCTATGGAATGTAGGATTGGTCAGGGTTGGTTTTCAAAGGTAATTTTAATAAAGAGTT ATGGATAATTTCCTAGGAGGTTTTACAGAGGACTCTACAACCTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCTTTCCCAGTACCTGTACGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTCCATGGACGAGATGGAGTTGTTCCACTCTCTGGAAGATCCATGCATCCAGGGAGCGTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCAGCGAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGTGGTCCCTTCAGTTTTGGTTCATTTTCAGAGAAGTGGAAAAATCAGAAGAAGAAATTCGAGTCATCAAAGAAAGAGTCTTCTTCGCAGGGTGGAAATTCACAGCATGAAGCAGTGGGCAATGAGTGGCTGCAAATGGGTAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTTATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGTCCCCAACCGTTGCCAGCAAAAGTCCTTGCAATCGGTCTTCTTGGCATGGCAGCAAATGTACCTCTAGGAATATGGAGAGAACATACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCTAAATCAGCCATGGCATTTACCATTGCAGCGTCAGTTTTAGGGCAGGTTATCGGCTCAAGGGCAGAGCGACTTCGACTCAAGGCAGTGGCTTCGAAAAAACTAACCCTACAAGATTCTCTCACGGAAGCTACCCTTTTGCCGGTGGTTAACATGAAGAATGGTCATTGTGGCGACATAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGTCCAGCTTCACCAAATAAGGAAGATGACTGTTATGCTCCAATCATCTCAAATGGTAGAATCTTGAATAGAAATGTCTTCCATTGGACTACGTAG ATGGATAATTTCCTAGGAGGTTTTACAGAGGACTCTACAACCTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCTTTCCCAGTACCTGTACGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTCCATGGACGAGATGGAGTTGTTCCACTCTCTGGAAGATCCATGCATCCAGGGAGCGTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCAGCGAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGTGGTCCCTTCAGTTTTGGTTCATTTTCAGAGAAGTGGAAAAATCAGAAGAAGAAATTCGAGTCATCAAAGAAAGAGTCTTCTTCGCAGGGTGGAAATTCACAGCATGAAGCAGTGGGCAATGAGTGGCTGCAAATGGGTAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTTATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGTCCCCAACCGTTGCCAGCAAAAGTCCTTGCAATCGGTCTTCTTGGCATGGCAGCAAATGTACCTCTAGGAATATGGAGAGAACATACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCTAAATCAGCCATGGCATTTACCATTGCAGCGTCAGTTTTAGGGCAGGTTATCGGCTCAAGGGCAGAGCGACTTCGACTCAAGGCAGTGGCTTCGAAAAAACTAACCCTACAAGATTCTCTCACGGAAGCTACCCTTTTGCCGGTGGTTAACATGAAGAATGGTCATTGTGGCGACATAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGTCCAGCTTCACCAAATAAGGAAGATGACTGTTATGCTCCAATCATCTCAAATGGTAGAATCTTGAATAGAAATGTCTTCCATTGGACTACGTAG MDNFLGGFTEDSTTFNQDIQRCPFLRNINEPTNFSFSSSMAFPVPVRGAKGPIFEDGPNFDMAFRLFHGRDGVVPLSGRSMHPGSVELKPAPSQFNPLAAKAATISLSSFGPGGPFSFGSFSEKWKNQKKKFESSKKESSSQGGNSQHEAVGNEWLQMGNCPIAKSYRAVSSVIPLVAKALQPPPGMKFRCPPAVVAARAALAKTAFAKNLRPQPLPAKVLAIGLLGMAANVPLGIWREHTEKFSPSWFAAVHAAVPFIAMLRKSILMPKSAMAFTIAASVLGQVIGSRAERLRLKAVASKKLTLQDSLTEATLLPVVNMKNGHCGDIESWNPVTTLQVAGPASPNKEDDCYAPIISNGRILNRNVFHWTT
BLAST of CsaV3_5G025790 vs. NCBI nr
Match: XP_004143803.1 (PREDICTED: uncharacterized protein LOC101212152 [Cucumis sativus] >KGN51213.1 hypothetical protein Csa_5G492350 [Cucumis sativus]) HSP 1 Score: 650.2 bits (1676), Expect = 4.2e-183 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. NCBI nr
Match: XP_008465667.1 (PREDICTED: uncharacterized protein LOC103503307 [Cucumis melo] >XP_008465668.1 PREDICTED: uncharacterized protein LOC103503307 [Cucumis melo]) HSP 1 Score: 644.8 bits (1662), Expect = 1.8e-181 Identity = 343/347 (98.85%), Postives = 346/347 (99.71%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. NCBI nr
Match: XP_023551625.1 (uncharacterized protein LOC111809406 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 608.2 bits (1567), Expect = 1.8e-170 Identity = 325/345 (94.20%), Postives = 332/345 (96.23%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. NCBI nr
Match: XP_022939830.1 (uncharacterized protein LOC111445588 [Cucurbita moschata]) HSP 1 Score: 605.5 bits (1560), Expect = 1.2e-169 Identity = 324/345 (93.91%), Postives = 331/345 (95.94%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. NCBI nr
Match: XP_022134400.1 (uncharacterized protein LOC111006669 [Momordica charantia] >XP_022134401.1 uncharacterized protein LOC111006669 [Momordica charantia]) HSP 1 Score: 599.4 bits (1544), Expect = 8.6e-168 Identity = 305/345 (88.41%), Postives = 313/345 (90.72%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TAIR10
Match: AT4G25030.1 (unknown protein) HSP 1 Score: 417.9 bits (1073), Expect = 6.4e-117 Identity = 227/350 (64.86%), Postives = 257/350 (73.43%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TAIR10
Match: AT5G45410.1 (unknown protein) HSP 1 Score: 391.3 bits (1004), Expect = 6.4e-109 Identity = 201/309 (65.05%), Postives = 235/309 (76.05%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TrEMBL
Match: tr|A0A0A0KNM8|A0A0A0KNM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G492350 PE=4 SV=1) HSP 1 Score: 650.2 bits (1676), Expect = 2.8e-183 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TrEMBL
Match: tr|A0A1S3CPS7|A0A1S3CPS7_CUCME (uncharacterized protein LOC103503307 OS=Cucumis melo OX=3656 GN=LOC103503307 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 1.2e-181 Identity = 343/347 (98.85%), Postives = 346/347 (99.71%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TrEMBL
Match: tr|D7TMC2|D7TMC2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g03990 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 2.2e-135 Identity = 253/356 (71.07%), Postives = 283/356 (79.49%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TrEMBL
Match: tr|A0A2P4I7Y5|A0A2P4I7Y5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41039 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 2.8e-135 Identity = 265/328 (80.79%), Postives = 289/328 (88.11%), Query Frame = 0
BLAST of CsaV3_5G025790 vs. TrEMBL
Match: tr|A5BGJ2|A5BGJ2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_005903 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 2.8e-135 Identity = 250/346 (72.25%), Postives = 280/346 (80.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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