CmoCh04G027120 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCCAACCAAGGCGTGTGTCTTGCACGGCGTCGTTTCATCTCTCTCTCTCTCTCTCTCTCCGCTCTGTTCTGCAACAAAAACGAAAAACAAAAATCGAAAGCATTTCTCTTTTCTACTCCATCTCTGCCTTCACCTACCTATTATCCCTTCTCCGATCCTCTCCTCTTCCTCTCTCTCTCTCTGATCTCCAGGTACGATTCTGCATTCCTTTTTCTTCTGTTGTTTCCGATCTGGCTTTGCATCGTGTTTTTAATTTCTGTTTTTAATTGCGTTCTCAATTTTCGTTCGTTTCTTTTTTGTTGTAATTGTTGGAGTTTTTGTGCGATCTGACTTGCTAGACGTACATCTGCTTCTTACGAGCTCAATACATTCGAATTGTTTCGGATTTGTGTTTTAGTTTTGTATTTTCAGGATCCGTTAGCTATGGATTCAGTTCAGAGTTGGTTGTTGTGGAATTTTTTCGCATATAGCCTTAATTGAATGACAATTTTGCTCAAAGTGTTGATCGAGTTGATTGAAAAAACAACCGGTTTTGTTAGTTGTGTCTAGAATTGCTTGCATATCCTTGTTTTCAACTACTGCGTGTTGTTGCATCTCCTGCATATTGAAGTGGTTTTAGTGATTAGGGCCTCTAGATGAATTGGGAAGATTCTTTTAGGAGAAAAGCTAATTCCTAGTTCATTTTACTTTGGTTGACTTTTCTTCGTGAAAATTGGCTTTAAGCAGTCGTATGGTTTTGGGGCTCTTATGCTTGAATTGAAAAGAAAAACCTTCATGCTATGGATATTGTTTCTTTGTGTACTCTTCTTCTATATAAATATATACCGATTCTGTTGTAAAAAACTTATGGTGACCATTCCATCTTTGAGTATGTTAGGTTATTGAAGGTAGAAATGGATAATTTCCTTGGAGGCTTTACAGAGGATATCCAAAGATGCCCATTCTTGAGGAATATTAATGAGCCGACTCATTTCTCATTTTCCTCGTCCATGGCATTCCCCATGCCTGTAAGTTTTTTCTTTCTATAATTTTGTGTTTGAATTTGTACAAATGAATTAATTCAACTCGTTTTGTCCTATAAATTACAACATTGGTCAATGTTCAACTATGGAAAACACTTTAATATCAGATATGCATCTGTATTTCCCTAAAATTATACTAAGGGTTCAACGTAATAGGAATGTAATAATAGTTTTCCTGTCAAAGTTATTCAGTGTTCCATTATTTTTATAACTATTTACAATACTCTACATATATAAATATATAAATATTTGTTTTACAACACTTGACACATGTAAATATTAATTCTAGTTATATATAAATCATTTCTTATAGTTTAGTGTTGCCAGCCCAAGCACTACTTATTCTAGTGTAGATGGTATACGTATACCTGTTTTAGTTTCTGGCTTGTATGACTTAATAGATGAATAAGTGGATACTTTCTTATCACTAGTGACATGGCTGAGGTGAATTAAATGCACTTTTTGTACCTCTGTTAGTTATCCTCTTAGTGTGTTGTTATAACTATTAGCGGTTCGCTCCAGGATTCGAGTGTTATATTTAGTTATTCGACAAAACTTATGATCTTCAATGTAGGTTGTTGTTAGGTCTCCCTCGATGTTCTTGTAACTCAGTTTTGCATATAATTCTGACATTTTTCTGATTTCTAGTTAATCTAATAACTGCTTCTACACTTGTTATAGGTGCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCTAATTTTGATATGGCATTTAGGCTTTTCCATGGTCGAGATGGAGTGGTTCCACTCTCTGGAAGATCTATGCATCCAGAGAGTGTAGAACTCAAACCAGCCCCATCGCAGTTCAATCCTTTAGCTGCAAAAGCTGCCACCATTAGTCTCTCTTCCTTCGGACCTGGAGGTCCCTTCAGCTTTGATTCATTTTCAGACAAGTGGAAAAATCAGAAAAAGAAATTTGAGTCATCCAAGAAAGAGTCTTCTTCAAAGGTGATCAATTGTTAATCTTTGATGGGTTATATCCATTGAGTACTTTGGCTGTTAGGTGAAAAATGATGGAATTCATATGCTAAAGAATATTGTGATCGGAATGGATGAAAATCTGTAGGATGTATGTGATCTTTTCTCTTGACTTATCATTATGTTCATTTTCAGGGTGGAAATTCACATGAAGCTGTGGGTAATGAGTGGCTGCAAATGGGGAACTGCCCAATTGCGAAGTCGTACCGTGCTGTTAGCAATGTCATACCGCTTGTTGCGAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGTCCACCAGCCGTAGTTGCAGCAAGAGCAGCATTAGCAAAGACTGCATTTGCAAAGAATCTCCGACCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAATGTACCTTTAGGAATATGGAGAGAACACACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTGAGGAAATCCATCTTAATGCCGAAGTCAGCAATGGCATTTACAATTGCAGCATCAGTCTTAGGCCAGGTTATCGGCTCAAGGGCAGAGCGATTCCGACTCAAGGCAGTAGCTTCGGAAAAACTAACCCTCCAAGATTCAATCAGCAAATCGACCCCTTTTCCCGTAGTTACTGTGAAAAACGGTCATTGTGGCGACATCGAGAGCTGGAATCCAGTTACCACTCTTCAGGTAGCAGGTCCTCCATCACCAACCAACATACCCTGCTGATCTCTCCTTCACCATTTATTGTGAGTGTTCTTCTCTGTATCCTATTGTGTTTAATTCTCCATTATACACCAGTTTGTTCAAAGTATTTGGCAGTATTTGACAGTTCAAAGTATAAATTGATGAAATAAAAAGTGTCTTTGTGTGTGTATTAAATCCCGGTGGGAATGTTGTTCAATTTTGCTTTGTCATATTTTGGCTCAGAAGGAAGGTGATGAGAAACACAACGTATTATAGAGGAAAGATGGTGAAATGTGAGGAGATGGGAGACTTTGTCATGAATTGAATTCAATATTGTCGGCTAAATCAATCACTATTTTAGTTGACCCAGGAAGGTTGATTTCTTTTGTACTTTTCCTTCAACCTTCCAAAAGTGTTTATGGAAAACTCATGGCAAATGGAGCACAATTTCTGTTTTGCATGTCTGATCTTGAATTGGCGTTTACGACGTTTATGACGTTTTCTCCCTTGTAAAGGCCGAGTCAAGTTGACTTTGTGTTCTCGATGTTTCCTTCTCATCATTTTTCCACTTACTTTTTAGTTAGTTAGCTAACCAAAAGATGATTATCGGTTCAAGGACGCATGGTACCTCTATTTTGAAAACCTCGAACCTATGTTCGAGTTGCAAGTACTACGATACTGAAGTAACTCACGGC ACTCCAACCAAGGCGTGTGTCTTGCACGGCGTCGTTTCATCTCTCTCTCTCTCTCTCTCTCCGCTCTGTTCTGCAACAAAAACGAAAAACAAAAATCGAAAGCATTTCTCTTTTCTACTCCATCTCTGCCTTCACCTACCTATTATCCCTTCTCCGATCCTCTCCTCTTCCTCTCTCTCTCTCTGATCTCCAGGTTATTGAAGGTAGAAATGGATAATTTCCTTGGAGGCTTTACAGAGGATATCCAAAGATGCCCATTCTTGAGGAATATTAATGAGCCGACTCATTTCTCATTTTCCTCGTCCATGGCATTCCCCATGCCTGTGCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCTAATTTTGATATGGCATTTAGGCTTTTCCATGGTCGAGATGGAGTGGTTCCACTCTCTGGAAGATCTATGCATCCAGAGAGTGTAGAACTCAAACCAGCCCCATCGCAGTTCAATCCTTTAGCTGCAAAAGCTGCCACCATTAGTCTCTCTTCCTTCGGACCTGGAGGTCCCTTCAGCTTTGATTCATTTTCAGACAAGTGGAAAAATCAGAAAAAGAAATTTGAGTCATCCAAGAAAGAGTCTTCTTCAAAGGGTGGAAATTCACATGAAGCTGTGGGTAATGAGTGGCTGCAAATGGGGAACTGCCCAATTGCGAAGTCGTACCGTGCTGTTAGCAATGTCATACCGCTTGTTGCGAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGTCCACCAGCCGTAGTTGCAGCAAGAGCAGCATTAGCAAAGACTGCATTTGCAAAGAATCTCCGACCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAATGTACCTTTAGGAATATGGAGAGAACACACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTGAGGAAATCCATCTTAATGCCGAAGTCAGCAATGGCATTTACAATTGCAGCATCAGTCTTAGGCCAGGTTATCGGCTCAAGGGCAGAGCGATTCCGACTCAAGGCAGTAGCTTCGGAAAAACTAACCCTCCAAGATTCAATCAGCAAATCGACCCCTTTTCCCGTAGTTACTGTGAAAAACGGTCATTGTGGCGACATCGAGAGCTGGAATCCAGTTACCACTCTTCAGGTAGCAGGTCCTCCATCACCAACCAACATACCCTGCTGATCTCTCCTTCACCATTTATTAAGGAAGGTGATGAGAAACACAACGTATTATAGAGGAAAGATGGTGAAATGTGAGGAGATGGGAGACTTTGTCATGAATTGAATTCAATATTGTCGGCTAAATCAATCACTATTTTAGTTGACCCAGGAAGGTTGATTTCTTTTGTACTTTTCCTTCAACCTTCCAAAAGTGTTTATGGAAAACTCATGGCAAATGGAGCACAATTTCTGTTTTGCATGTCTGATCTTGAATTGGCGTTTACGACGTTTATGACGTTTTCTCCCTTGTAAAGGCCGAGTCAAGTTGACTTTGTGTTCTCGATGTTTCCTTCTCATCATTTTTCCACTTACTTTTTAGTTAGTTAGCTAACCAAAAGATGATTATCGGTTCAAGGACGCATGGTACCTCTATTTTGAAAACCTCGAACCTATGTTCGAGTTGCAAGTACTACGATACTGAAGTAACTCACGGC ATGGATAATTTCCTTGGAGGCTTTACAGAGGATATCCAAAGATGCCCATTCTTGAGGAATATTAATGAGCCGACTCATTTCTCATTTTCCTCGTCCATGGCATTCCCCATGCCTGTGCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCTAATTTTGATATGGCATTTAGGCTTTTCCATGGTCGAGATGGAGTGGTTCCACTCTCTGGAAGATCTATGCATCCAGAGAGTGTAGAACTCAAACCAGCCCCATCGCAGTTCAATCCTTTAGCTGCAAAAGCTGCCACCATTAGTCTCTCTTCCTTCGGACCTGGAGGTCCCTTCAGCTTTGATTCATTTTCAGACAAGTGGAAAAATCAGAAAAAGAAATTTGAGTCATCCAAGAAAGAGTCTTCTTCAAAGGGTGGAAATTCACATGAAGCTGTGGGTAATGAGTGGCTGCAAATGGGGAACTGCCCAATTGCGAAGTCGTACCGTGCTGTTAGCAATGTCATACCGCTTGTTGCGAAAGCTCTTCAGCCCCCACCAGGCATGAAATTTAGATGTCCACCAGCCGTAGTTGCAGCAAGAGCAGCATTAGCAAAGACTGCATTTGCAAAGAATCTCCGACCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAATGTACCTTTAGGAATATGGAGAGAACACACCGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTGAGGAAATCCATCTTAATGCCGAAGTCAGCAATGGCATTTACAATTGCAGCATCAGTCTTAGGCCAGGTTATCGGCTCAAGGGCAGAGCGATTCCGACTCAAGGCAGTAGCTTCGGAAAAACTAACCCTCCAAGATTCAATCAGCAAATCGACCCCTTTTCCCGTAGTTACTGTGAAAAACGGTCATTGTGGCGACATCGAGAGCTGGAATCCAGTTACCACTCTTCAGGTAGCAGGTCCTCCATCACCAACCAACATACCCTGCTGA
BLAST of CmoCh04G027120 vs. TrEMBL
Match: A0A0A0KNM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G492350 PE=4 SV=1) HSP 1 Score: 632.9 bits (1631), Expect = 2.3e-178 Identity = 321/350 (91.71%), Postives = 333/350 (95.14%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TrEMBL
Match: A0A059AD99_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01105 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 4.1e-143 Identity = 263/334 (78.74%), Postives = 294/334 (88.02%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TrEMBL
Match: A0A059AE03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01105 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 4.1e-143 Identity = 263/334 (78.74%), Postives = 294/334 (88.02%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TrEMBL
Match: A0A061FNX3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_046954 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 5.0e-141 Identity = 265/354 (74.86%), Postives = 297/354 (83.90%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TrEMBL
Match: D7TMC2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03990 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 3.6e-139 Identity = 260/339 (76.70%), Postives = 293/339 (86.43%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TAIR10
Match: AT4G25030.1 (AT4G25030.1 unknown protein) HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-120 Identity = 230/332 (69.28%), Postives = 262/332 (78.92%), Query Frame = 1
BLAST of CmoCh04G027120 vs. TAIR10
Match: AT5G45410.1 (AT5G45410.1 unknown protein) HSP 1 Score: 401.0 bits (1029), Expect = 7.5e-112 Identity = 204/308 (66.23%), Postives = 246/308 (79.87%), Query Frame = 1
BLAST of CmoCh04G027120 vs. NCBI nr
Match: gi|449452110|ref|XP_004143803.1| (PREDICTED: uncharacterized protein LOC101212152 [Cucumis sativus]) HSP 1 Score: 632.9 bits (1631), Expect = 3.3e-178 Identity = 321/350 (91.71%), Postives = 333/350 (95.14%), Query Frame = 1
BLAST of CmoCh04G027120 vs. NCBI nr
Match: gi|659131402|ref|XP_008465667.1| (PREDICTED: uncharacterized protein LOC103503307 [Cucumis melo]) HSP 1 Score: 632.1 bits (1629), Expect = 5.6e-178 Identity = 321/350 (91.71%), Postives = 333/350 (95.14%), Query Frame = 1
BLAST of CmoCh04G027120 vs. NCBI nr
Match: gi|702477090|ref|XP_010032212.1| (PREDICTED: uncharacterized protein LOC104421806 [Eucalyptus grandis]) HSP 1 Score: 515.8 bits (1327), Expect = 5.9e-143 Identity = 263/334 (78.74%), Postives = 294/334 (88.02%), Query Frame = 1
BLAST of CmoCh04G027120 vs. NCBI nr
Match: gi|629085258|gb|KCW51615.1| (hypothetical protein EUGRSUZ_J01105 [Eucalyptus grandis]) HSP 1 Score: 515.8 bits (1327), Expect = 5.9e-143 Identity = 263/334 (78.74%), Postives = 294/334 (88.02%), Query Frame = 1
BLAST of CmoCh04G027120 vs. NCBI nr
Match: gi|1009120892|ref|XP_015877168.1| (PREDICTED: uncharacterized protein LOC107413670 [Ziziphus jujuba]) HSP 1 Score: 515.0 bits (1325), Expect = 1.0e-142 Identity = 268/360 (74.44%), Postives = 291/360 (80.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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