CsaV3_5G025450 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G025450
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDEAD/DEAH box helicase, putative
Locationchr5 : 20573797 .. 20586104 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCAAACCATACATTTTATCCACACAATAAAATAAAATCTAAATTATCGGAAGGGAGTAGCTAAAGCCGAAGTCCGGAGTCATGGCGATTCCCGCCATTAACGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCCTCCTTCCTAACCCCTCACTATTCCGCCTCCAGGTTTTGCCCCCATAAACCTCTTGCCTTCTACTCTACCCGTCCAGTTCCATTTCGGCCTTCCTTTCACTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGATGAGGATGAAGACGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGGATTCGAGCAAAGCTACGATGAAGTGGAATTGTCGATGGACACTTCAGAAATTTCTAATGCATCCCAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGAATCGATAAGTTTCAGGTAAATCCTACATTTATTTGTAATATTGAAGAATGTCATGACATATCCTATCAATTCGCCTGAACTTTACCAACTGTACTCTTGCAATTTTATCATCTTGTGTTAGCGGCTAGCCGTACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCAAACCAGAAATTTCGCGAGTTTCGGTAAGCAATTTCTGCATTTTTTGCTACCTATTGCTGCTTTTATGTCGATTAGTTTTGTTAAGTCAATCTCCTTCTATTGTTTCAGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCCGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGGTGAGATATCAACATGTTCTAGTCATGCACGAACTTGTCAACGACCTCCAATCAAGTGGCAAGAGCCTAGAATGGGGTTCCGTCTAAGTAGTTCATTTTATCTGTGATTTTTCTCCCTTTCTTTGTCTTCTTTTAAAATCGCATGGGATCATTTTACAGAGCTTTTCTTTCTTTCTTTTATTTATTTTGATGTCAAAAAAGAAGAAAAAACTAGCCTGAAAAAAGAAGCCCATAACAGCAACCAAATCAGTTACTGGAAGTGACTCCAGTTAAAACTGAACATTACAGGAAAATTTTGTAGAGAACATACAAGGAGGTATTGAAGTGAGACATGCTCCAAACCTCCTCTTTTAGATCCGTTTTGTATCTTGAAGATTCTTTTATATTTCTGTAGTATAATGTTCTAGCTAATTATAGCACCATCTGCCGGTACCAGGGAAGTTCTCTATCACAATAGGAGGGATGAACGCCCCTTAATCATGTCCCAACAACCTATTCGAGGTATCAAACTGACAGCGGATCCCATGCAGTGTTGTTGTAGCAAGAAGCGAGGTGAGGCCTCGACACCATGAAGTTATACAAGGCGAGTGTCTGCAATAAGGTGCTAGCCTTATTGCTCCATCTTTCGCCTTTGTCTGCCTTTACCTTAAATGGAAGCGAGGGCATATGAGAATCACCTCAGTGTTGAATATCTTTTGTGAGACAAAACCTCTTAATTAGTTTTCAATGGAAAGTGGCATCTTCGATGATTTTAAGTATGTATATCATCATATCAAGGTACACAAAGGAGCTCTGTTTTCTAGAATATAAGAAAATAGTCTCGTCAACAAATTGTAGATATGTAATTTTTCCCATTCTCACAACCAACCCTTCTACTAAACTAAATCTCTATCCATGATTCTAAAAATAAGTCTACAAAGAACGTCTACCTCCACCTCAGAGAAGAAAAACAGACAAGGAATTTCATGCTTGATCCCTCTAGGATCCAGAATCTTGCCACTAGGCTTATATCTACCACAATGGAAAAATATTTTGTGACACAACTACAAATTGGTGCTTTCTCTTTAATGTCAAAGCCTTTTTTACTAACATTTTATCTAACAAGGTCAAAAACACATTTTAAGTAGAATGTAATAAATAACCCGAAATATTCACTATTTGAGATTTATTGAGAGCATGGGGACAAAACTTGGACATTTGCAAGTACAAGGACTAAATGAGTATATGGACCAAAATGGTATTTTTATCTTCTTAATTATCTTGTTGACTATAGACATCTCATCCAAGATCTTTTCCTTTGTGGAAAATACTCTTTGATTAATGGAGATGGTGCTGTTAGATACCTAGATTAGTATAGGGTAGATGTATAAGGGTAATTAAATATGTAGACAGTTACATGGTTATAAATAGGAAGTTGGTGAGGGAAGAAAGAGGAGATCAGTTTGTGGGTAGTTTTTCTGCACTCTTTCTTGAGAGAGAGGATAGGCAGAGGGGGTAGTATTTTTTTCTTGTTCTTAGTTATTTTCTGCATTTTCATCTCAGAATTGATATTCATCAATTCTTCTCTGTAAAAGGGAGGTTTATATCAATTGAATAAGAACATATCTTATTGGTGTTCAATCAGGTGCTAGGTGCCAGGTGATTACAAACATCTACTTCCTATTCTTTCATAGCTCTTCAATAATCAAACGAGTTTGAGGTGGTTAAGGTGTTTCTGATAACATAAAAAATTATCAAAGTTACTTTGGTTTTACAGGACTATGAATCGTGTATATTTTTGTTTTCAATATATATGTGTGTATATATATATAGATAAATAGATAGATAGATACTTTATTTTCTTACCAACTATGAAAAGGTTTTCTTTCCCCTTCCAATTCAAGGATATTATTTGAATTATAATAGGTAGTTGAATATGTTTTCATGCAGTGTTGGAATGGCCACATCTGCTAGTGGACTGTTTCATGTGGATGTTATTGTTTTGGATGAAGTTCATTACCTTAGTGATATTTCTCGGGGCACAGTGTGGGAAGAGATTGTAAGTATTTGTTAATGTGGATTCTTATTTGGTCTAACTTAGTAACGCTTGTTCTATTAATCAGCTAGTGAATATTTTAGGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTATCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATCGGTCAGGTAATGTTTTCTATAAGCACCTGAGCCTTTAAAACAACCACGATTGGTGTCTCTTTTTATTAATTTGTATTTATATATCACTATTGTTTTGATATCTGTCTTGGAAATCATATTCGATAGTTGACCTATCGATTTCTTCCTTCTAATACAAGCGTCAAAGAATTGGAACATCTCTACATTTTTCTTAATCTCCTCATTTTGGGTCACCTCTTCTATGGAAGCAAGTTGGGTCTCATTGATATCTACGTTCCAACTTGAGGAGGGGGAGTGTTAGAATTAGTGGGCTTGGCCAAGGAAGAATTTACCCCAATTTCCTTTCCTTTTTTATCATAAGCTTGTTGTCTATTTATTTTCCCTTTTGTATCTTTTGTTAATGTGAGAAATTAATAAGAAAATCAATTCGTGATTTTTCTCCTTGTAATCGGGTTTCCACGCAACTTGGTGTCTATTTTCTTTACCACTTTTAACACTTATCCTATTTTTCTTTCATAGTTTTCTTTTCCTTGCTTTTTCCTGGGGTAAAATAAATAAACTCTCTTTTACGCTTATAGTTTATCTTTTCTTTTGTTTATTTGGAAATTGCTGGAAACAAGGAGTTTTGTTGATAGTTTATAGCCCCGAGGGCATTTTAGTATTTTACTTTACCCCAAGTTTATTTCCTTTTTTGTATAGGGCTTTCTAGAGTCTATAAAATTGTCTTTTTTTCTGTAACTTTCGTTGTGTGTGGAAATAATAAAAGAGACTATCGTGGTTTTTTCTCCCTGTTCTAGGATTTTCCAAGTAAACCTTGTGTTATCTTTCCTACCATTTAGTAGAGATTTTATTTGAACTCCTTAGGATTGAGTGATGGTGTTGTTGGTGGTGATTCCTTTTTTTTCTTCTTTGGAAGTTTAAGGCTTAAATTGATATAATTCCTAGTTTGAGAGGTTAAAATTGATGCAACCTTCAAAATTTATAGTTTAAATTGATGTTTGCTCAACATAAAAGAACAAACAATCTTATACGTACTTAAAATAGTCAGTGGTCTATCCATGTTCTGAAATGACATTTGTTTCAGTGCTTATTATTCTTGTTTCTTTTCAGGTTTCTTGATAAATGGATTGAGTGTTTTTTCTTAATTAAAGTGCTCAAAGTACGTATGGTGTGAATGTTAATTACTTTTTCTTTTCACTTCTTAAGATCCATGGGAAAACTGAGTTAGTAACATCATCAAAGCGTCCAGTACCATTGACTTGGCATTTCTCTACGAAGACCTCTTTACTTCCTCTCCTTGATGAGAAAGGAGCGCGCATGAATAGGTATTGTTTAATTTCTGTAGAAGCTATTGGCATAGGTTTGATATTATTTAGCTTAGTGTGGTTTCTTGTTGTGCTATGATAAAAGGAATAACGTTTTTGTGAAGCCTTTATTTATAGAGTTTGATTTTAAATTGAGTTTATTTCCGTAGTTAGTTTTTTCTTATAAAAAAATGTTGGTAGTTATCTTCCTTCTTTGAGAGTTCTGAGTAAGTGTAAGGCATTCCCTTACTAACTTTAGTATTACTGATAAAAGGTTCTGAAGGCTACAAAATACTTTTGAGTACAGAGAGCGTATCCTCTCCTTCCCCAGACTAATTCCAATACTAAAAGCCTGCCCTAATTAACACTCTTTATTCTATTTATCGGCTCATCACTCCTCACTTTCATACAAGCTAGTGGTCCCCCCATGTAACTAACTTTCACCTGTGCATCCCTTTTTACCCCTCCTAGAGTATTTCAGCAGAAATGGTGGCCTAACATCATCCCCAGGGTCAGATGAACCTTGTCCTCGAGGTTGAAAGTGGAGAATTTCTGTTGAAAGTCTAGCGATCATCCAAGTTGCTTCATGATCAGGAAGGCCCATCCAACTTACAAGTAGCTCAGTGTCCTGTGTTTAAGGATTTCGACGGAACCCTACAATATCCTTAGGTTCAGCTATTCAAAGTTATCTGTCAATATAGGAGGTCCAGCCTGCATTATCTGCATTTCTCCCACAAATTTCTTAAGTTGGGATTCATGAAATACTGGGTGAATTGTTGCTTCTGATGGAAGTTCTCATTTGTATGCCACCTGACCTATTTTTTCAATCAATTTACAAGGGCCAAAGAACGTTGTTGTTAGCTTCTCATTTCGCTTCTTTGCATTTGGCAACCTGTATCTGTCAGTATGGTCTAATCTTCAAGTAAACCTAATCTCCAATTTCAAAAGTAAATTCCCTTCTACTTTTATCTGCAAACTTTCTCATTTGGTTTTGTGCCATTTCTAAGTGTTCTTTAAGGGCATTCATTGTAACATCACGATCGTGAGCAGTTGATCTAAGGTTGCATTTGTAGTCTTTTGATTTCCATAAGCTATCAAGGGTTGTGGTGGTGGTGGTGGTGGTCTGCCGTAAAGTGCTTGACAAGGAGTCATCTTGATGGAGCCATGTACATGGTATTGTGCTGGTATTCCGCCCAATGTAGCTACAAAGCCCACTGTTTTGACTTCTCACTACAAAAGCAACGCAATTACGTTTCTAGCCCTTTGTTAACAAATCTCTATTTGACTGTCTGTCAGGGGTGATATGTTGTGCTTGGACGAAGGCTTGTGCCTTGAGATTTAAACGGTTCTGTCCAAAAATGGCTCAAGAAAATCTTATCTCAGTCTGTCACAATGGATCGTGGGAAGCCATGGTCCTTGACTACTCCCTTGATATATCTCTGTCTTTGCCATATAAGGATGTTTGAGAGGTGGGAAATGCCCATATTTGCTAAGCTGATCCACCACTACTAGTATGGACTCAACTTTTTCCGATTGTGGAAGTCCTTCAACGAAATCCATTGATATATCGTCCCAAATTCGTTAATTCGTGAACGAATTTGAAGTGTTTGCAGTAACCCTGCCGGACTCATAGATTCTATTTTCTTCTTTTGACACACTGTACACTGCTCCATGTATTTCTTGACATCTCCTTTCATAATTTCCCAATATAATTCCCCTTGCAAACGTTTGTACATATGTAGAAAACTCGAGTGATCATGATACAAGTGTAATATTGCTGGAATCAATTTAGAATTTCGGGATAAGACTAACCTGCCTTTGTATTGCAGTGTATCTTGGTGGATTAAGAATTTCGAAATGTAATCAGGATCCTCATGCGGTTCCATATGGTTAACAGTTTTTAATCCATCACTTTGGCCTTAAGCACTTCAATGTCAACTAAGCATGGAACACTGAGACTTGCTAAATGAACAATTTCCGGCAATCATGAAAGGGCATCAGCAACCTTGTTTCCTGGTCCCGGTTGGTACTGAATTTTGAAAATGTAACTCAGCAGTTTGGAAACCCATTTCTGATATTCCAGTTGGATCACTCTTTGTTCTGTTAAAAACATGAGTGCTTTGATCTGTCTGGATGATGAAATGTTGGCTCAAATGATATGGTCTCCATCTTTGAACAACCATTACTCTTACCATAAGCTCTCGTTTGTAAACAGATTCCAGACGAGCTTGAGGAGAAAGTGTATGACTGAAAAAAGCTACGGGTTGTTGGTTTTGCATTAGCACGAAACCCAACCCAATTCCTGAAGCATCAGACTCAACTACAAATTGTTGAGTAAAGTCAGGCGCAGTGTGATCATGGCATTTTTTAGTTTGTTAAATGCCTCTTGTGCCTCCCACGTCCACTCGAACCCCCCTATACGAAGGAGTTAAGTTAATGGTGCTGTTAAACTCCCATAGTTGGCAACAAAACACTAGTAGTAGCCTGTTAATCCGAGGAACCCTCTCAATTCTTGTAGGTTCGTTGGTGCTCGGTATTTTATCATTGCCCTCAACTCCGGATCTGCACTTACACCTCTAGCATAGATTAAATGGCCTAGATATTCCACACATTCTTGAGCAAGTTTGCATTTGTTTCCATTTAGATGCAGGGGTTTTTTTTTGCAAAATTTGGAAAACGTGCACATTTTCACTAATATCAGCATTGTTCAGTGCTTGGTAGTCAACACAAAATCTTCATTCGCCGTCCTTTTTCTTGACTAACAAGACTGGGCTTGAGTAAGGACTGGTACTAGGTTGTATGATTCCTGCCTGCAGCATATCGTCCACCATTTTTTCAATTTCATTCTTCTGGTGATGTGTGTACTGGTATGGTCATACATCCACTGCCGCTGCTCCTTCCACAATATTGATCTGATGATCAATTTTGCATGATGGTGGAAATTCATTCGACATTTGAAATAACTTAGAGATGTGCAGTTCATACAACTCTTCGGTTTGTGTATTTGGTACCAGGGTCATGATAGGAACTTCCGGTTTTATACATCTCTCCCAATTTCTTGGTATTTTCTTTCCAGATTTCTTGTTTGATTGGAGGGCATGAAAAATCAAATTCCTTATGTGGAAGTTTGTGATCGCTTTGCCTCAATTTCATTATTGAAAAAATATACAGAATAGAGGAGACGTAGGCCTAATCACGCTTTCTACCGGAGAAGGAAGATTTTTAGTTTTACAATTTTTTTGGAGGAGTGGAATTTTGTATAGAACAAATTTCTGGAGAAAAAATTGTGAGAGAGATAGGTAGCGAACTTTTGTTCTTCTCTACTCTCAAAATCCACCATTCAGAGAAAGGATTGAAGAACAAATATGTAAAGATACCACAGAAGTATCTATGTATATTGATGATCAACAATTACAATATGAAATAACTCTGTGATTCAATGAATATTGATCACGGATAACAACTCAAGTAAATGACAATCTCTAATAACAGAAATAATTGAACAAACAGAATTACTCAGACAAATTCTCTCAAACAAGAAACCATAGAAAGCAAGAACAATAATGAACCTGGACCCTCTGCCTTTCCTTCCCTCGCAAGGAGGAATGCCGCTTCTCTTCTTCTTACCAAAATCCTCGATGCCTCCTCCCTTCTCTTTCCTTCCTTTTATTATGTTTTGCTAACTAACTACTGGGCTCCACCAGAGTGGTCCCCATCTCCTTTACTTTCTCCTACACTCCCACGTATGGTATTAATAGTATTTTTATTTCTTCTGCTATATTTAAAAAGCAGTGGAGGCCTGACAAAATTCGTGAGGGGAGTTACCCACCCCAATCCCTAGCTGCAAGAGAGTAAATTTAATAAAATTAGCTACTTGATAAAGTGCATTGTATTCGTTGTATTACTTGGATAAGAAACCAAATCTAATCCAAATACTATAGACGTTTTAGGGTATCACTCTAACATGATCCACTTTTATGTCGACCAAACACTGTTCAAGATACAAAAAATAACCTTGGAAGAATAAGTAAGACTTCATGAATATCATTTATTTATGAAAAAATAAATAAGACTTTTATTCAATTAAAATATGTTTAGAAAATGTAAGTTTACAAACTACGAAATTTATGATCAATCCCAACAGGACTTTTATTTATTCTGACCATTCTTTGTTGTAATTTGTAAAATGTGGTTCTCTTGCATTTGTTCTTTTTTAAGTTTTCTGGGAGTTTGCTTTGTTTCCATGTAATTTGAACAATTGTCTCTTTTCATTTTCAATAAAAACTTTTGTTTCCTTTGAAAAAATAAAAACAAAAAGTAATAGGTAACAAAATATAAAAAATAGACATGCAATTATGTAAAGACAATCACGACCTTACTTGAACATGGTCTGTTCCGTAGGTTGTACAAGTGTATCCTTGAGTTCTTATGATACTATTACTATTTGCTTGCAGCTGATATGTTAGTCATGTTTAGTATTACTCGTGCCTCCTAAATTCAACTTCATTGTAGAATTCTGGAAATAACTTTAAAAACTTCATATTTTTTGGAGCGCGCTTTGTGTGTTTTTCGTAATTTTTGTTCTTGGTTGCTCTGTTAGTATTATATAATATGTTAATGATAGCAATCTATATGAATAATAATAAGAAAAAAGATAGCTACCTTTAATTTCTACTGTAGTTATTAGTTCTATCATTGGAATTTTTTCACTTCCCTTGTGTGGTCTGTGTGCCGTGTATGAATGGGCCATTTGAAATAATTTACCAATGTACACTGTTTTTTTTTCTTCTTTTCTCTCTTCCAAATTGGAGCAGGAAGCTGTCGCTCAATTATCTTCAGCTTAATGCTTCAGGAGATAAATTTTCTAAGGATGATGGATCAAGAAGAAGAACCCCAAAAAGGCGTGGGAATGAGATCAGCTATGACAATATTGGCAGCATGTCTAGACAAGCTACACTTTCAAAGAATGATATAAACTCAATCCGCCGTTCAAATGTACTTGGTGAACCAACCTCTCTATCTCCCTTCATCTTCTCCCAATATTTTTATGCTAAACTCAACCAAAGAAAGTTTTAACAGGTTGGTTATTATCTTTCCAGGTTCCTCAGGTGATTGATACATTGTGGCAACTTAAGTCAAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGTAGGAAAGGATGTGATGCAGCTGTTCAGTACATCGATAGCAGCAATCTCTTAGATGATTGTGAGAGGAGTGAAGTTGAACTTGCATTGAGGAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTATCAAAGGACTTCTGCAAGGAGTTGCTGCACATCACGCTGGCTGCCTGCCTCTCTGGAAGTCATTCATTGAAGAGCTGTTTCAGAGGGGACTTGTGAAGGTCGTCTTTGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGTAAAAGAAGCAATAATGGTCGCACCCATTTAAGCCCAAATGAACTGCTTCAAATGGCTGGGCGTGCTGGGCGTCGAGGCATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAATGCTGCAAGCTCCTATTTGCTGGCATTGAACCACTTGTTTCTCAGTTTACGGCTTCATATGGAATGGTACTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACAAGTGAAATGGATGAGACGAAAGCTTTCCAAGCTTGGCGAACGCTAGAAGAAGCTAGGAAGTTAGTTGAACAAAGTTTTGGAAACTATGTTGGGAGCAACGTCATGCTTGCAGCAAAGGAGGAGCTTGTCAAAATAGAAAAAGAGATTGAAATGCTCAATTTAGAAATAACTGATGAAGCCATTGATAGAAAAAGCAGGAAGTTCTTGTCAGACATGGCATATAATGAGATAGCAGAGCTGCAGGAGGAACTACGATTAGAGAAACGTCACAGGACAGAACTGCGAAAAGAGATGGAATCACAAAGAATTTGTGCCCTCAATTCTCTGTTACGAAATCTAGGAGATGGACATTTGCCATTTTTGTGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTACAGTTCTCCTTGGAAACATGGACTCATCAAAACTTGGTAACATGTTTCCTGCTGATAGTTCTTTGAGTGGTGCAGAATCAAATCTTGGTATCACCTTGGAGCCAGGTGCTGAATCATCTTATTATGTGGCACTAGGTTCAGATAACTCGTGGTACCTATTTACTGAGAAATGGATCAAAACAGTTTATAAAACTGGCTTTCCTAATGTTGCTTTATCTAAAGGGGATGCTTTACCTCGAGAGATTATGAGGAGTCTTCTTGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTAGCATGTATGGAAGGATCTCTAGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTCAATCGTACATGGAGTCTTTAGATAGGTACAAGGTGCAAAGAAATAAAGTTGCACGATTGAAGAAAAGGATTTCTAAAACAGAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATCTTATAGAGGACAAGATTAGACAATTAAAGACTAGGTATAAGCGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGGTGGAAAGAGTTTTTGCAAATCAGCAATGTGATACATGAAATCAGAGCACTTGATATAAATACTCATGTCATGTTTCCACTTGGAGAAACCGCAGCTGCTATACGAGGTGAAAATGAGCTGTGGATTGCCATGGTTCTAAGAAACAAATTCTTAGTACAACTAAAGCCTACGGAGCTTGCTGCTGTTTGTGCAAGTTTAGTTTCTGAAGGCATCAAAGTTCGCCCCGGAAGGAATAACAGTTACATATTTGAACCATCAAGAACAGTAATCAATATGATCAATTTTCTAGAAGAGCAGAGGAATTCTCTAGAAGATCTTCAAGAAAAGCATGGAGTGAACATATCATGCTGTTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCATCTGGGTTGACTTGGAGAGAGATAATGATGGATTGTGCAATGGATGAGGGAGATCTGGCGCGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAGATTCCAAAATTGCCTGATATCGATCCATCTTTGCAACGCAATGCATCCACTGCTTCTGATGTCATGAATCGTCCACCTATAAGCGAATTGGCTGGATAACCTTGCCTGAAAATGGCAGGCACATGCATAAGGTTGGTTTGTTATTGTAACTTTGCCCTTTATTTATGAATCTGTATATTCTTCATCCTGCATTTTTGGCAAGCCAAATTAACAGTGATGGGACATGTTCTTACGAGGTCGTTGGCTGTTGGCTCAAGTGAGCAAAACACATCCTCTAATAAGCTGCTTTAAGGTGTGAATACTTCTTTTGTATTCAATTTTATTTGTGACTTCCGTGAAATGAATTTGAAAAATGATAACATAATATTGATAGATTTTGTTTAACTAATTTTCTTTGGGCTAAAATATACTAAATATTAATAAACTTTGTACTTCGTTTTGGTTAGAAGTTTTTACCGTTCCAAAAATACCCTTAAATCTTTCAAGAAAAGTTAATAAAATATTCTTATAGTTGGTTTTGGATGAAAACTATTAGTGTTTGG

mRNA sequence

ATGGCGATTCCCGCCATTAACGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCCTCCTTCCTAACCCCTCACTATTCCGCCTCCAGGTTTTGCCCCCATAAACCTCTTGCCTTCTACTCTACCCGTCCAGTTCCATTTCGGCCTTCCTTTCACTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGATGAGGATGAAGACGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGGATTCGAGCAAAGCTACGATGAAGTGGAATTGTCGATGGACACTTCAGAAATTTCTAATGCATCCCAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGAATCGATAAGTTTCAGCGGCTAGCCGTACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCAAACCAGAAATTTCGCGAGTTTCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCCGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCACATCTGCTAGTGGACTGTTTCATGTGGATGTTATTGTTTTGGATGAAGTTCATTACCTTAGTGATATTTCTCGGGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTATCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATCGGTCAGATCCATGGGAAAACTGAGTTAGTAACATCATCAAAGCGTCCAGTACCATTGACTTGGCATTTCTCTACGAAGACCTCTTTACTTCCTCTCCTTGATGAGAAAGGAGCGCGCATGAATAGGAAGCTGTCGCTCAATTATCTTCAGCTTAATGCTTCAGGAGATAAATTTTCTAAGGATGATGGATCAAGAAGAAGAACCCCAAAAAGGCGTGGGAATGAGATCAGCTATGACAATATTGGCAGCATGTCTAGACAAGCTACACTTTCAAAGAATGATATAAACTCAATCCGCCGTTCAAATGTTCCTCAGGTGATTGATACATTGTGGCAACTTAAGTCAAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGTAGGAAAGGATGTGATGCAGCTGTTCAGTACATCGATAGCAGCAATCTCTTAGATGATTGTGAGAGGAGTGAAGTTGAACTTGCATTGAGGAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTATCAAAGGACTTCTGCAAGGAGTTGCTGCACATCACGCTGGCTGCCTGCCTCTCTGGAAGTCATTCATTGAAGAGCTGTTTCAGAGGGGACTTGTGAAGGTCGTCTTTGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGTAAAAGAAGCAATAATGGTCGCACCCATTTAAGCCCAAATGAACTGCTTCAAATGGCTGGGCGTGCTGGGCGTCGAGGCATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAATGCTGCAAGCTCCTATTTGCTGGCATTGAACCACTTGTTTCTCAGTTTACGGCTTCATATGGAATGGTACTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACAAGTGAAATGGATGAGACGAAAGCTTTCCAAGCTTGGCGAACGCTAGAAGAAGCTAGGAAGTTAGTTGAACAAAGTTTTGGAAACTATGTTGGGAGCAACGTCATGCTTGCAGCAAAGGAGGAGCTTGTCAAAATAGAAAAAGAGATTGAAATGCTCAATTTAGAAATAACTGATGAAGCCATTGATAGAAAAAGCAGGAAGTTCTTGTCAGACATGGCATATAATGAGATAGCAGAGCTGCAGGAGGAACTACGATTAGAGAAACGTCACAGGACAGAACTGCGAAAAGAGATGGAATCACAAAGAATTTGTGCCCTCAATTCTCTGTTACGAAATCTAGGAGATGGACATTTGCCATTTTTGTGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTACAGTTCTCCTTGGAAACATGGACTCATCAAAACTTGGTAACATGTTTCCTGCTGATAGTTCTTTGAGTGGTGCAGAATCAAATCTTGGTATCACCTTGGAGCCAGGTGCTGAATCATCTTATTATGTGGCACTAGGTTCAGATAACTCGTGGTACCTATTTACTGAGAAATGGATCAAAACAGTTTATAAAACTGGCTTTCCTAATGTTGCTTTATCTAAAGGGGATGCTTTACCTCGAGAGATTATGAGGAGTCTTCTTGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTAGCATGTATGGAAGGATCTCTAGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTCAATCGTACATGGAGTCTTTAGATAGGTACAAGGTGCAAAGAAATAAAGTTGCACGATTGAAGAAAAGGATTTCTAAAACAGAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATCTTATAGAGGACAAGATTAGACAATTAAAGACTAGGTATAAGCGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGGTGGAAAGAGTTTTTGCAAATCAGCAATGTGATACATGAAATCAGAGCACTTGATATAAATACTCATGTCATGTTTCCACTTGGAGAAACCGCAGCTGCTATACGAGGTGAAAATGAGCTGTGGATTGCCATGGTTCTAAGAAACAAATTCTTAGTACAACTAAAGCCTACGGAGCTTGCTGCTGTTTGTGCAAGTTTAGTTTCTGAAGGCATCAAAGTTCGCCCCGGAAGGAATAACAGTTACATATTTGAACCATCAAGAACAGTAATCAATATGATCAATTTTCTAGAAGAGCAGAGGAATTCTCTAGAAGATCTTCAAGAAAAGCATGGAGTGAACATATCATGCTGTTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCATCTGGGTTGACTTGGAGAGAGATAATGATGGATTGTGCAATGGATGAGGGAGATCTGGCGCGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAGATTCCAAAATTGCCTGATATCGATCCATCTTTGCAACGCAATGCATCCACTGCTTCTGATGTCATGAATCGTCCACCTATAAGCGAATTGGCTGGATAA

Coding sequence (CDS)

ATGGCGATTCCCGCCATTAACGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCCTCCTTCCTAACCCCTCACTATTCCGCCTCCAGGTTTTGCCCCCATAAACCTCTTGCCTTCTACTCTACCCGTCCAGTTCCATTTCGGCCTTCCTTTCACTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGATGAGGATGAAGACGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGGATTCGAGCAAAGCTACGATGAAGTGGAATTGTCGATGGACACTTCAGAAATTTCTAATGCATCCCAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGAATCGATAAGTTTCAGCGGCTAGCCGTACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCAAACCAGAAATTTCGCGAGTTTCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCCGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCACATCTGCTAGTGGACTGTTTCATGTGGATGTTATTGTTTTGGATGAAGTTCATTACCTTAGTGATATTTCTCGGGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTATCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATCGGTCAGATCCATGGGAAAACTGAGTTAGTAACATCATCAAAGCGTCCAGTACCATTGACTTGGCATTTCTCTACGAAGACCTCTTTACTTCCTCTCCTTGATGAGAAAGGAGCGCGCATGAATAGGAAGCTGTCGCTCAATTATCTTCAGCTTAATGCTTCAGGAGATAAATTTTCTAAGGATGATGGATCAAGAAGAAGAACCCCAAAAAGGCGTGGGAATGAGATCAGCTATGACAATATTGGCAGCATGTCTAGACAAGCTACACTTTCAAAGAATGATATAAACTCAATCCGCCGTTCAAATGTTCCTCAGGTGATTGATACATTGTGGCAACTTAAGTCAAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGTAGGAAAGGATGTGATGCAGCTGTTCAGTACATCGATAGCAGCAATCTCTTAGATGATTGTGAGAGGAGTGAAGTTGAACTTGCATTGAGGAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTATCAAAGGACTTCTGCAAGGAGTTGCTGCACATCACGCTGGCTGCCTGCCTCTCTGGAAGTCATTCATTGAAGAGCTGTTTCAGAGGGGACTTGTGAAGGTCGTCTTTGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGTAAAAGAAGCAATAATGGTCGCACCCATTTAAGCCCAAATGAACTGCTTCAAATGGCTGGGCGTGCTGGGCGTCGAGGCATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAATGCTGCAAGCTCCTATTTGCTGGCATTGAACCACTTGTTTCTCAGTTTACGGCTTCATATGGAATGGTACTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACAAGTGAAATGGATGAGACGAAAGCTTTCCAAGCTTGGCGAACGCTAGAAGAAGCTAGGAAGTTAGTTGAACAAAGTTTTGGAAACTATGTTGGGAGCAACGTCATGCTTGCAGCAAAGGAGGAGCTTGTCAAAATAGAAAAAGAGATTGAAATGCTCAATTTAGAAATAACTGATGAAGCCATTGATAGAAAAAGCAGGAAGTTCTTGTCAGACATGGCATATAATGAGATAGCAGAGCTGCAGGAGGAACTACGATTAGAGAAACGTCACAGGACAGAACTGCGAAAAGAGATGGAATCACAAAGAATTTGTGCCCTCAATTCTCTGTTACGAAATCTAGGAGATGGACATTTGCCATTTTTGTGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTACAGTTCTCCTTGGAAACATGGACTCATCAAAACTTGGTAACATGTTTCCTGCTGATAGTTCTTTGAGTGGTGCAGAATCAAATCTTGGTATCACCTTGGAGCCAGGTGCTGAATCATCTTATTATGTGGCACTAGGTTCAGATAACTCGTGGTACCTATTTACTGAGAAATGGATCAAAACAGTTTATAAAACTGGCTTTCCTAATGTTGCTTTATCTAAAGGGGATGCTTTACCTCGAGAGATTATGAGGAGTCTTCTTGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTAGCATGTATGGAAGGATCTCTAGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTCAATCGTACATGGAGTCTTTAGATAGGTACAAGGTGCAAAGAAATAAAGTTGCACGATTGAAGAAAAGGATTTCTAAAACAGAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATCTTATAGAGGACAAGATTAGACAATTAAAGACTAGGTATAAGCGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGGTGGAAAGAGTTTTTGCAAATCAGCAATGTGATACATGAAATCAGAGCACTTGATATAAATACTCATGTCATGTTTCCACTTGGAGAAACCGCAGCTGCTATACGAGGTGAAAATGAGCTGTGGATTGCCATGGTTCTAAGAAACAAATTCTTAGTACAACTAAAGCCTACGGAGCTTGCTGCTGTTTGTGCAAGTTTAGTTTCTGAAGGCATCAAAGTTCGCCCCGGAAGGAATAACAGTTACATATTTGAACCATCAAGAACAGTAATCAATATGATCAATTTTCTAGAAGAGCAGAGGAATTCTCTAGAAGATCTTCAAGAAAAGCATGGAGTGAACATATCATGCTGTTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCATCTGGGTTGACTTGGAGAGAGATAATGATGGATTGTGCAATGGATGAGGGAGATCTGGCGCGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAGATTCCAAAATTGCCTGATATCGATCCATCTTTGCAACGCAATGCATCCACTGCTTCTGATGTCATGAATCGTCCACCTATAAGCGAATTGGCTGGATAA

Protein sequence

MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG
BLAST of CsaV3_5G025450 vs. NCBI nr
Match: XP_011655295.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [Cucumis sativus] >KGN51183.1 hypothetical protein Csa_5G484640 [Cucumis sativus])

HSP 1 Score: 2245.3 bits (5817), Expect = 0.0e+00
Identity = 1168/1168 (100.00%), Postives = 1168/1168 (100.00%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
            MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60

Query: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
            SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120

Query: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
            SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180

Query: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
            APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240

Query: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
            NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300

Query: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
            CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360

Query: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
            GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420

Query: 421  SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
            SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL
Sbjct: 421  SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480

Query: 481  RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
            RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI
Sbjct: 481  RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540

Query: 541  NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
            NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC
Sbjct: 541  NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600

Query: 601  KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
            KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG
Sbjct: 601  KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660

Query: 661  NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
            NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE
Sbjct: 661  NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720

Query: 721  KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
            KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK
Sbjct: 721  KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780

Query: 781  LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
            LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA
Sbjct: 781  LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840

Query: 841  LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
            LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND
Sbjct: 841  LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900

Query: 901  ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
            ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY
Sbjct: 901  ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960

Query: 961  KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
            KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL
Sbjct: 961  KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020

Query: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
            RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL
Sbjct: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080

Query: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
            QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL
Sbjct: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140

Query: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1169
            PDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1168

BLAST of CsaV3_5G025450 vs. NCBI nr
Match: XP_011655294.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 2237.6 bits (5797), Expect = 0.0e+00
Identity = 1168/1177 (99.24%), Postives = 1168/1177 (99.24%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
            MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60

Query: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
            SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120

Query: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
            SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180

Query: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
            APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240

Query: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
            NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300

Query: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
            CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360

Query: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
            GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420

Query: 421  SIRRSN---------VPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC 480
            SIRRSN         VPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC
Sbjct: 421  SIRRSNVLGWLLSFQVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC 480

Query: 481  ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF 540
            ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF
Sbjct: 481  ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF 540

Query: 541  ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT 600
            ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT
Sbjct: 541  ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT 600

Query: 601  PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA 660
            PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA
Sbjct: 601  PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA 660

Query: 661  RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA 720
            RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA
Sbjct: 661  RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA 720

Query: 721  ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV 780
            ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV
Sbjct: 721  ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV 780

Query: 781  LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV 840
            LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV
Sbjct: 781  LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV 840

Query: 841  YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP 900
            YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP
Sbjct: 841  YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP 900

Query: 901  VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED 960
            VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED
Sbjct: 901  VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED 960

Query: 961  KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE 1020
            KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE
Sbjct: 961  KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE 1020

Query: 1021 NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE 1080
            NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE
Sbjct: 1021 NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE 1080

Query: 1081 EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1140
            EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI
Sbjct: 1081 EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1140

Query: 1141 DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1177

BLAST of CsaV3_5G025450 vs. NCBI nr
Match: XP_008465717.2 (PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucumis melo])

HSP 1 Score: 2161.7 bits (5600), Expect = 0.0e+00
Identity = 1130/1173 (96.33%), Postives = 1147/1173 (97.78%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
            MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS     ASRFC HKPLAFYST PV F
Sbjct: 1    MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60

Query: 61   RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
            RPSF SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61   RPSFQSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGEFEQSYDEVELSM 120

Query: 121  DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
            D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121  DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180

Query: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
            SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241  GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
            GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241  GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
            EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360

Query: 361  LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
            LLDEKG RMNRKLSLNYLQL+ASG K  KDDGS RRTPKRRGNEISYDNIGSMSRQATLS
Sbjct: 361  LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGS-RRTPKRRGNEISYDNIGSMSRQATLS 420

Query: 421  KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
            KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQY+DSSNLLDDCERSE
Sbjct: 421  KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYVDSSNLLDDCERSE 480

Query: 481  VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
            VELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481  VELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540

Query: 541  LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
            LAAGINMPARTAVIASLSKRSNNGRT LS NELLQMAGRAGRRGID KGHVVLLQTPYEG
Sbjct: 541  LAAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDXKGHVVLLQTPYEG 600

Query: 601  AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
            AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETK FQAWRTLEEARKLV
Sbjct: 601  AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLEEARKLV 660

Query: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
            EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSD+AYNEIAELQE
Sbjct: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNEIAELQE 720

Query: 721  ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
            ELR EKRHRTELRKEMESQRI ALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN
Sbjct: 721  ELRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780

Query: 781  MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
            MDSSKLGNMFPAD+SLSGAESNL ITLEPG+ESSYYVALGSDNSWYLFTEKWIKTVYKTG
Sbjct: 781  MDSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIKTVYKTG 840

Query: 841  FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
            FPNVAL+KGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS
Sbjct: 841  FPNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900

Query: 901  LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
            LSENDELLQMSQSYMESL+RYKVQRNKVARLKKRIS+TEGFREYKKILDMANL+EDKIRQ
Sbjct: 901  LSENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLVEDKIRQ 960

Query: 961  LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
            LKTRYKRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961  LKTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020

Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
            IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080

Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
            SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140

Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            QIPKLPD+DPSLQ NASTASDVMNRPPISELAG
Sbjct: 1141 QIPKLPDVDPSLQSNASTASDVMNRPPISELAG 1172

BLAST of CsaV3_5G025450 vs. NCBI nr
Match: XP_022150310.1 (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Momordica charantia])

HSP 1 Score: 2013.8 bits (5216), Expect = 0.0e+00
Identity = 1051/1173 (89.60%), Postives = 1110/1173 (94.63%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
            MA PAIN YS I+ +HL  PPLSYPFP+F+ PH S      SRFC  KPL   S  PV F
Sbjct: 1    MASPAINAYS-IAPKHLW-PPLSYPFPTFICPHCSTPPIQTSRFCRLKPLTICSPYPVRF 60

Query: 61   RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
            RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXX AEEYDSDALGGFEQSYDEV+LS+
Sbjct: 61   RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXXAEEYDSDALGGFEQSYDEVDLSI 120

Query: 121  DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
            +T+EIS   ++FKWQRVEKLL EVREFGE I+DVDELAS+YNFRIDKFQRLAVQAFLRGS
Sbjct: 121  ETTEISTPPEDFKWQRVEKLLSEVREFGEEIVDVDELASIYNFRIDKFQRLAVQAFLRGS 180

Query: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
            SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG++NVGLLT
Sbjct: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGENNVGLLT 240

Query: 241  GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
            GDSAVNKDA +LIMTTEILRNMLYQSVGMA+SASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241  GDSAVNKDAQILIMTTEILRNMLYQSVGMASSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
            EIVIYCPKEVQLICLSATVANPDELAGWIGQIHG+TELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGQTELVTSSKRPVPLTWHFSTKTSLLP 360

Query: 361  LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
            LLDEKG RMNRKLSLNYLQL+ASG K  KDDGSRRR PKR GNEISYD+  SMSRQATLS
Sbjct: 361  LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISYDSTSSMSRQATLS 420

Query: 421  KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
            KNDIN+IRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+  NLLD+CERSE
Sbjct: 421  KNDINTIRRSNVPQVMDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGRNLLDECERSE 480

Query: 481  VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
            VELALR+FRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481  VELALRRFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540

Query: 541  LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
            LAAGINMPAR+AVIASLSKRSNNGRT LS NELLQMAGRAGRRGID+KGHVVL+QTPYEG
Sbjct: 541  LAAGINMPARSAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDQKGHVVLIQTPYEG 600

Query: 601  AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
            AEECCK+LFAGIEPLVSQFTASYGMVLNLLAGAKVTH+SE+DETKAF A RTLEEARKLV
Sbjct: 601  AEECCKILFAGIEPLVSQFTASYGMVLNLLAGAKVTHSSEIDETKAFLAGRTLEEARKLV 660

Query: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
            EQSFGNYVGSNVMLAAKEELVKIEKEI+MLNLEIT+EAIDRKSRKFLS++AYNEIAELQE
Sbjct: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIKMLNLEITEEAIDRKSRKFLSEVAYNEIAELQE 720

Query: 721  ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
            ELR EKRHRTELRKEME QRI AL SLL+NLGDGHLPFLCLQYKDSEGVQHS+P VLLGN
Sbjct: 721  ELRSEKRHRTELRKEMELQRIYALKSLLQNLGDGHLPFLCLQYKDSEGVQHSVPAVLLGN 780

Query: 781  MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
            MDSSK  NMFP D++LS AESNLGI L+PGAESSYYVALGSDNSWYLFTEKWI+TVYKTG
Sbjct: 781  MDSSKFNNMFPVDNALSAAESNLGINLDPGAESSYYVALGSDNSWYLFTEKWIRTVYKTG 840

Query: 841  FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
            FPNVAL+KGDALPRE+MR+LLDKEGM WEKLADSELGSL+CMEGSLETWSWSLNVPVLNS
Sbjct: 841  FPNVALTKGDALPRELMRTLLDKEGMXWEKLADSELGSLSCMEGSLETWSWSLNVPVLNS 900

Query: 901  LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
            LSENDELLQMS SYMESL+RYK QRN+VARLKKRI++TEGFREYKK+LDMAN+IEDKIRQ
Sbjct: 901  LSENDELLQMSSSYMESLERYKEQRNRVARLKKRIARTEGFREYKKVLDMANIIEDKIRQ 960

Query: 961  LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
            LK R KRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961  LKARSKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020

Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
            IAMVLRNKFLVQLKPTELAAVCASLVSEGIK+RPGRNNSYIFEPS TV+NMI+FLEEQR+
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKIRPGRNNSYIFEPSTTVMNMIDFLEEQRS 1080

Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
            SL  LQEKHGV+I CCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLLHLQEKHGVDIPCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140

Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            QIPKLPDIDPSLQ NASTAS+VMNRPPISELAG
Sbjct: 1141 QIPKLPDIDPSLQSNASTASNVMNRPPISELAG 1171

BLAST of CsaV3_5G025450 vs. NCBI nr
Match: XP_022946499.1 (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucurbita moschata])

HSP 1 Score: 1984.1 bits (5139), Expect = 0.0e+00
Identity = 1048/1181 (88.74%), Postives = 1091/1181 (92.38%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFL-----TPHYSASRFCPHKPLAFYSTRPVPF 60
            MA PAINV+SIIS QHL  PPLSYPFPS L     +P   A RFC  KPL  +   PVPF
Sbjct: 1    MASPAINVFSIISPQHLW-PPLSYPFPSSLCSRCSSPPIQAPRFCRLKPLPIFYPFPVPF 60

Query: 61   RPSFHSPRSIFSEKSQLSDV--------XXXXXXXXXXXXXXXXAAEEYDSDALGGFEQS 120
            RPS  SPRSIFSEK QLSDV        XXXXXXXXXXXXXXXX AEEYD DA G  EQ 
Sbjct: 61   RPSVRSPRSIFSEKPQLSDVXXXXXXXXXXXXXXXXXXXXXXXXXAEEYDIDAFGELEQR 120

Query: 121  YDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA 180
            YDEVELSM+ +EIS A +EFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR A
Sbjct: 121  YDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQA 180

Query: 181  VQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG 240
            ++AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG
Sbjct: 181  IEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG 240

Query: 241  DSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSD 300
            DSNVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSD
Sbjct: 241  DSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSD 300

Query: 301  ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHF 360
            ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPLTWHF
Sbjct: 301  ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLTWHF 360

Query: 361  STKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGS 420
            STKTSLLPLLDEKG  MNRKLSLNYLQL+ASG K  KDDGSRRR PKR GNEIS D   S
Sbjct: 361  STKTSLLPLLDEKGKHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISNDRTSS 420

Query: 421  MSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNL 480
            +SRQATLSKNDINSIRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+  NL
Sbjct: 421  LSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNL 480

Query: 481  LDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLV 540
            LDDCERSEVELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLV
Sbjct: 481  LDDCERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLV 540

Query: 541  KVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVV 600
            KVVFATETLAAGINMPARTAVIASLSKRSN+GRT L+ NELLQMAGRAGRRGIDKKGHVV
Sbjct: 541  KVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVV 600

Query: 601  LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRT 660
            LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TKAFQA RT
Sbjct: 601  LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRT 660

Query: 661  LEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAY 720
            LEEARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+ +SD+AY
Sbjct: 661  LEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAY 720

Query: 721  NEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHS 780
            NE+ ELQE LR +KR RTELRKEME QRICA  SLL+NLGDG LPFLCLQYKDSEGVQHS
Sbjct: 721  NELVELQEGLRSDKRQRTELRKEMELQRICAFKSLLQNLGDGQLPFLCLQYKDSEGVQHS 780

Query: 781  IPTVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKW 840
            IP VL GNMDSSKL NMFPAD+SLSGAE N G  L+PGAESSYYVALGSDNSWYLFTEKW
Sbjct: 781  IPAVLFGNMDSSKLINMFPADNSLSGAEPNFGKNLDPGAESSYYVALGSDNSWYLFTEKW 840

Query: 841  IKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWS 900
            IKTVYKTGFPNVAL+KGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGSLETWSWS
Sbjct: 841  IKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWS 900

Query: 901  LNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMAN 960
            LNVPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRIS+T+GFREYKKILDMAN
Sbjct: 901  LNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMAN 960

Query: 961  LIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAA 1020
            +IEDKIRQLK RYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDIN+HVMFPLGETAAA
Sbjct: 961  IIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAA 1020

Query: 1021 IRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMI 1080
            IRGENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPSRTVINM+
Sbjct: 1021 IRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMV 1080

Query: 1081 NFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLL 1140
            NFLEEQRNSL DLQEKHGVNI C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL 
Sbjct: 1081 NFLEEQRNSLLDLQEKHGVNIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLF 1140

Query: 1141 RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNR PISELAG
Sbjct: 1141 RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1180

BLAST of CsaV3_5G025450 vs. TAIR10
Match: AT1G70070.1 (DEAD/DEAH box helicase, putative)

HSP 1 Score: 1494.9 bits (3869), Expect = 0.0e+00
Identity = 764/1067 (71.60%), Postives = 908/1067 (85.10%), Query Frame = 0

Query: 112  ELSMD-TSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQA 171
            E S+D  +E +    EF+WQRVEKL   VR+FG  +ID+DEL S+Y+FRIDKFQRLA++A
Sbjct: 106  EFSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEA 165

Query: 172  FLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSN 231
            FLRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD N
Sbjct: 166  FLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDN 225

Query: 232  VGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 291
            VGLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISR
Sbjct: 226  VGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISR 285

Query: 292  GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTK 351
            GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTS++RPVPLTW+FSTK
Sbjct: 286  GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTK 345

Query: 352  TSLLPLLDEKGARMNRKLSLNYLQLNASGDKF-SKDDGSRRRTPKRRGNEISYDNIGSMS 411
             SLLPLLDEKG  +NRKLSLNYLQL+AS  +F   DDG R+R  K+RG + SY+N+ +++
Sbjct: 346  HSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT 405

Query: 412  RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 471
                LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+++  LLD
Sbjct: 406  -DYPLSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLD 465

Query: 472  DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 531
            DCE+SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 466  DCEKSEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKV 525

Query: 532  VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 591
            VFATETLAAGINMPARTAVI+SLSK++ N R  L PNEL QMAGRAGRRGID+KG+ VL+
Sbjct: 526  VFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV 585

Query: 592  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDET-KAFQAWRTL 651
            QT +EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT  S   E  K  QA R+L
Sbjct: 586  QTAFEGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSL 645

Query: 652  EEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYN 711
            EEA+KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAID+KSRK LS   Y 
Sbjct: 646  EEAKKLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYK 705

Query: 712  EIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSI 771
            EI  L+EELR EK                AL  LL+ + +G+LPF+CL++KDSEG + S+
Sbjct: 706  EITVLKEELREEKXXXXXXXXXXXXXXXLALKPLLKGMEEGNLPFICLEFKDSEGREQSV 765

Query: 772  PTVLLGNMDS---SKLGNMFPADSS--LSGAESNLGITL--EPGAESSYYVALGSDNSWY 831
            P V LG++DS   SKL  M   D S  L+  E  L      +P  + SYYVALGSDNSWY
Sbjct: 766  PAVYLGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEPGKPNVKPSYYVALGSDNSWY 825

Query: 832  LFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSL 891
            LFTEKW++TVY+TGFPN+AL+ GDALPREIM++LLDK  M+W+KLA+SELGSL  +EGSL
Sbjct: 826  LFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGSL 885

Query: 892  ETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKK 951
            ETWSWSLNVPVL+SLS+ DE+L MS+ Y  +  +YK QR+K++RLKK++S++EGFREYKK
Sbjct: 886  ETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKK 945

Query: 952  ILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPL 1011
            IL+ ANL  +K+++LK R +RL NR++QIEPSGWK+F++ISNVIHE RALDINTH++FPL
Sbjct: 946  ILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPL 1005

Query: 1012 GETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSR 1071
            GETAAAIRGENELW+AMVLRNK LV LKP +LA VCASLVSEGIKVRP R+N+YI+EPS 
Sbjct: 1006 GETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSD 1065

Query: 1072 TVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEG 1131
            TV++M+NFLE+QR+SL  LQEKH V I CCLD QFSGMVEAWASGL+W+E+MM+CAMDEG
Sbjct: 1066 TVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDEG 1125

Query: 1132 DLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            DLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+RPPISELAG
Sbjct: 1126 DLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171

BLAST of CsaV3_5G025450 vs. TAIR10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 268.5 bits (685), Expect = 2.0e-71
Identity = 183/533 (34.33%), Postives = 282/533 (52.91%), Query Frame = 0

Query: 149 VDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYT 208
           V ++A  + F +D FQ+ A+    +G SV V+A TS+GKT++AE A         R  YT
Sbjct: 350 VPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 409

Query: 209 TPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSA 268
            P+K +SNQK+R+F    G  +VGLLTGD ++  +A  LIMTTEILR+MLY+       A
Sbjct: 410 APIKTISNQKYRDF---CGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYR------GA 469

Query: 269 SGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIH 328
             +  ++ ++ DEVHY++D+ RG VWEE++I  P+ +  + LSATV N  E A WIG+  
Sbjct: 470 DIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTK 529

Query: 329 GKTELVT-SSKRPVPLTWHFSTKTSLLPLLD-----EKGAR----MNRKLSLNYLQLNAS 388
            K   VT ++KRPVPL         L  + +      KG +      +K + N + +   
Sbjct: 530 QKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPK 589

Query: 389 GDKFSK--DDGSR--RRTPKRRGNEISYDNIGSMSRQATLSKNDIN-SIRRSNVPQVIDT 448
               S    DGS+  +     RG +  + ++  + + +    +  N + RRS     +  
Sbjct: 590 QQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLL 649

Query: 449 LWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVEL-------ALRKFRIQ 508
           + +L    +LP V F FS+  CD     +  ++L    E+SE+ +        L+     
Sbjct: 650 INKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRN 709

Query: 509 FPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 568
            P  +R  ++  L +G+  HHAG LP+ K  +E LF RG++KV+F+TET A G+N PART
Sbjct: 710 LPQVLRLQSL--LHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPART 769

Query: 569 AVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL---QTPYEGAEECCKLL 628
            V  +L K        L P E  QMAGRAGRRG+DK G VV++   + P E   +  +++
Sbjct: 770 VVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDE--SDLRRVI 829

Query: 629 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKA-FQAWRTLEEARKLV 656
                 L SQF  +Y M+L+LL   ++     +  + A F A + L E ++L+
Sbjct: 830 VGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLL 869

BLAST of CsaV3_5G025450 vs. TAIR10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 253.1 bits (645), Expect = 8.6e-67
Identity = 169/483 (34.99%), Postives = 252/483 (52.17%), Query Frame = 0

Query: 153 ASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 212
           A  + F +D FQ  A++    G SV+VSA TS+GKT++A  A   ++   +R+ YT+P+K
Sbjct: 61  AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIK 120

Query: 213 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 272
           ALSNQK+R+F+E F D  VGL+TGD  ++ +A  L+MTTEILR+M Y+       +  + 
Sbjct: 121 ALSNQKYRDFKEEFSD--VGLMTGDVTIDPNASCLVMTTEILRSMQYK------GSEIMR 180

Query: 273 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK-T 332
            V  I+ DEVHY+ D  RG VWEE ++  PK  + + LSATV N  E A W+ ++H +  
Sbjct: 181 EVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPC 240

Query: 333 ELVTSSKRPVPLTWHF--STKTSLLPLLDEKGA--RMNRKLSLNYLQLNASGDKFSKDDG 392
            +V +  RP PL  +   +    L  ++DEK      + + SLN L      DK  +D+G
Sbjct: 241 HIVYTDYRPTPLQHYVFPAGGNGLYLVVDEKSKFHEDSFQKSLNALVPTNESDK-KRDNG 300

Query: 393 SRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVW 452
             ++             IG +  ++ + K          V  +I   +        P + 
Sbjct: 301 KFQKGLV----------IGKLGEESDIFK---------LVKMIIQRQYD-------PVIL 360

Query: 453 FIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRE-----SAIKGLLQG 512
           F FS+K C+A    +    L  D E+  VE           D  ++     + +  L +G
Sbjct: 361 FSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILKRG 420

Query: 513 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTH 572
           +  HH+G LP+ K  IE LFQ GL+K +FATET + G+NMPA+T V  ++ K   +    
Sbjct: 421 IGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW 480

Query: 573 LSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVL 626
           LS  E +QM+GRAGRRGIDK+G  +L+            +L    + L S F  SY M+L
Sbjct: 481 LSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLL 508

BLAST of CsaV3_5G025450 vs. TAIR10
Match: AT2G06990.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 246.9 bits (629), Expect = 6.2e-65
Identity = 181/579 (31.26%), Postives = 291/579 (50.26%), Query Frame = 0

Query: 151 ELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTP 210
           ++A  Y F++D FQ ++V    R  S++VSA TS+GKT +AE A       K+R+ YT+P
Sbjct: 73  DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132

Query: 211 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASG 270
           LKALSNQK+RE +  F D  VGL+TGD  ++ +A  L+MTTEILR MLY+       +  
Sbjct: 133 LKALSNQKYRELQHEFKD--VGLMTGDVTLSPNASCLVMTTEILRAMLYR------GSEV 192

Query: 271 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK 330
           L  V  ++ DE+HY+ D  RG VWEE +I+ P  ++++ LSAT++N  E A WI  +H +
Sbjct: 193 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQ 252

Query: 331 -TELVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSR 390
              +V +  RP PL  H++      P+    G  +       YL ++   ++F +D   +
Sbjct: 253 PCHVVYTDFRPTPLQ-HYA-----FPM---GGGGL-------YLVVD-DNEQFREDSFVK 312

Query: 391 RRT--PKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVW 450
            +   PK + N+                         S+V +++  + + K +   P + 
Sbjct: 313 MQDTFPKPKSNDGKXXXXXXXXXXXXXXXXXXGD---SDVYKIVKMIMERKFE---PVII 372

Query: 451 FIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVR-----ESAIKGLLQG 510
           F FSR+ C+     +   +   D E+  VE           +  R     E  +  L +G
Sbjct: 373 FSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRG 432

Query: 511 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTH 570
           +A HH+G LP+ K  +E LFQ GLVK +FATET A G+NMPA+T V  ++ K   +   +
Sbjct: 433 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 492

Query: 571 LSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVL 630
           +   E +QM+GRAGRRG D++G  +++            ++     PL+S F  SY  +L
Sbjct: 493 IGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTIL 552

Query: 631 NLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEI 690
           NLL+ A+   T+E                  ++  SF  +     +     ++ K+E+E 
Sbjct: 553 NLLSRAEGQFTAE-----------------HVIRHSFHQFQHEKALPDIGNKVSKLEEEA 601

Query: 691 EMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEK 722
            +LN     E  +  + +F  D+A +E   + E +R E+
Sbjct: 613 AILNASGEAEVAEYHNLQF--DIAKHEKKLMSEIIRPER 601

BLAST of CsaV3_5G025450 vs. TAIR10
Match: AT4G32700.2 (helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding)

HSP 1 Score: 97.4 bits (241), Expect = 6.0e-20
Identity = 121/497 (24.35%), Postives = 200/497 (40.24%), Query Frame = 0

Query: 151 ELASVYNFR-IDKF-----QRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRR 210
           E+ SVYN + I K      + L V   L+  ++V  A TS+GK+ +AE   +  V R  +
Sbjct: 502 EVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGK 561

Query: 211 L-FYTTPLKALSNQKF-----------REFRETFGDSNVGLLTGDSAVNKDAPVLIMTTE 270
           +     P  ++  +K            +  R  +G+   G L       KD  V + T E
Sbjct: 562 MALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLP------KDTSVAVCTIE 621

Query: 271 ILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVI---YCPKE----- 330
              ++    +        L  + +IV+DE+H + D  RG + E ++    Y   E     
Sbjct: 622 KANSL----INRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGXXXX 681

Query: 331 ------------------VQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWH 390
                             +Q++ +SAT+ N   +A W+     +TE      RPVPL  +
Sbjct: 682 XXXXXXXXXXXXXDPAHGLQIVGMSATMPNVGAVADWLQAALYQTEF-----RPVPLEEY 741

Query: 391 FSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIG 450
               +++           N+K+ +    +  + D   KD                 D+I 
Sbjct: 742 IKVGSTI----------YNKKMEV-VRTIPKAADMGGKDP----------------DHIV 801

Query: 451 SMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSN 510
            +  +     N +                          + F  SRKGC++  ++I  S 
Sbjct: 802 ELCNEVVQEGNSV--------------------------LIFCSSRKGCESTARHI--SK 861

Query: 511 LL---------DDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSF 570
           L+         ++ E  ++  A+   R + P  V     + L  GVA HHAG     +  
Sbjct: 862 LIKNVPVNVDGENSEFMDIRSAIDALR-RSPSGVDPVLEETLPSGVAYHHAGLTVEEREI 921

Query: 571 IEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGR 595
           +E  +++GLV+V+ AT TLAAG+N+PAR  +     ++   GR  +      QM+GRAGR
Sbjct: 922 VETCYRKGLVRVLTATSTLAAGVNLPARRVIF----RQPMIGRDFIDGTRYKQMSGRAGR 923

BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match: sp|B9DFG3|ISE2_ARATH (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISE2 PE=1 SV=2)

HSP 1 Score: 1494.9 bits (3869), Expect = 0.0e+00
Identity = 764/1067 (71.60%), Postives = 908/1067 (85.10%), Query Frame = 0

Query: 112  ELSMD-TSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQA 171
            E S+D  +E +    EF+WQRVEKL   VR+FG  +ID+DEL S+Y+FRIDKFQRLA++A
Sbjct: 106  EFSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEA 165

Query: 172  FLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSN 231
            FLRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD N
Sbjct: 166  FLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDN 225

Query: 232  VGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 291
            VGLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISR
Sbjct: 226  VGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISR 285

Query: 292  GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTK 351
            GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTS++RPVPLTW+FSTK
Sbjct: 286  GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTK 345

Query: 352  TSLLPLLDEKGARMNRKLSLNYLQLNASGDKF-SKDDGSRRRTPKRRGNEISYDNIGSMS 411
             SLLPLLDEKG  +NRKLSLNYLQL+AS  +F   DDG R+R  K+RG + SY+N+ +++
Sbjct: 346  HSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT 405

Query: 412  RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 471
                LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+++  LLD
Sbjct: 406  -DYPLSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLD 465

Query: 472  DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 531
            DCE+SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 466  DCEKSEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKV 525

Query: 532  VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 591
            VFATETLAAGINMPARTAVI+SLSK++ N R  L PNEL QMAGRAGRRGID+KG+ VL+
Sbjct: 526  VFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV 585

Query: 592  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDET-KAFQAWRTL 651
            QT +EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT  S   E  K  QA R+L
Sbjct: 586  QTAFEGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSL 645

Query: 652  EEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYN 711
            EEA+KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAID+KSRK LS   Y 
Sbjct: 646  EEAKKLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYK 705

Query: 712  EIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSI 771
            EI  L+EELR EK                AL  LL+ + +G+LPF+CL++KDSEG + S+
Sbjct: 706  EITVLKEELREEKXXXXXXXXXXXXXXXLALKPLLKGMEEGNLPFICLEFKDSEGREQSV 765

Query: 772  PTVLLGNMDS---SKLGNMFPADSS--LSGAESNLGITL--EPGAESSYYVALGSDNSWY 831
            P V LG++DS   SKL  M   D S  L+  E  L      +P  + SYYVALGSDNSWY
Sbjct: 766  PAVYLGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEPGKPNVKPSYYVALGSDNSWY 825

Query: 832  LFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSL 891
            LFTEKW++TVY+TGFPN+AL+ GDALPREIM++LLDK  M+W+KLA+SELGSL  +EGSL
Sbjct: 826  LFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGSL 885

Query: 892  ETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKK 951
            ETWSWSLNVPVL+SLS+ DE+L MS+ Y  +  +YK QR+K++RLKK++S++EGFREYKK
Sbjct: 886  ETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKK 945

Query: 952  ILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPL 1011
            IL+ ANL  +K+++LK R +RL NR++QIEPSGWK+F++ISNVIHE RALDINTH++FPL
Sbjct: 946  ILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPL 1005

Query: 1012 GETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSR 1071
            GETAAAIRGENELW+AMVLRNK LV LKP +LA VCASLVSEGIKVRP R+N+YI+EPS 
Sbjct: 1006 GETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSD 1065

Query: 1072 TVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEG 1131
            TV++M+NFLE+QR+SL  LQEKH V I CCLD QFSGMVEAWASGL+W+E+MM+CAMDEG
Sbjct: 1066 TVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDEG 1125

Query: 1132 DLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            DLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+RPPISELAG
Sbjct: 1126 DLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171

BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match: sp|Q9ZBD8|HELY_MYCLE (Probable helicase HelY OS=Mycobacterium leprae (strain TN) OX=272631 GN=helY PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.5e-86
Identity = 206/524 (39.31%), Postives = 281/524 (53.63%), Query Frame = 0

Query: 158 FRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQ 217
           F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + FYTTPLKALSNQ
Sbjct: 16  FSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGGKCFYTTPLKALSNQ 75

Query: 218 KFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVI 277
           K+ +    +G + +GLLTGD +VN D+PV++MTTE+LRNMLY     + +  GL HV   
Sbjct: 76  KYTDLTARYGRNRIGLLTGDQSVNGDSPVVVMTTEVLRNMLYAD---SFALQGLSHV--- 135

Query: 278 VLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSS 337
           V+DEVH+++D  RG VWEE++++ P +V+++ LSATV+N +E  GW+  + G T +V   
Sbjct: 136 VMDEVHFIADRMRGPVWEEVILHLPDDVRMVSLSATVSNAEEFGGWVQTVRGDTTVVVDE 195

Query: 338 KRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRG 397
            RPVPL  H      L  L D         ++ N L+  A   +   D  S  R P+RR 
Sbjct: 196 HRPVPLWQHVLVGKRLFDLFDYDSNVDQSPVNPNLLRHIAHCRE--ADRMSDWRNPRRRA 255

Query: 398 NEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDA 457
                       R + +      S+ R  V  ++D      ++ +LPA+ F+FSR GCDA
Sbjct: 256 -----------GRGSGVRPRFYRSLARPEVIAILD------AEGLLPAITFVFSRFGCDA 315

Query: 458 AVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV---------RESAI-------KGLLQ 517
           AVQ          C RS + L   + R Q  + +          + A+       +GLL+
Sbjct: 316 AVQ---------QCLRSPLRLTSEEERAQIAEVIDHRCGDLADADLAVLGYYEWREGLLR 375

Query: 518 GVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRT 577
           G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMPART V+  L K +     
Sbjct: 376 GLAAHHAGMLPAFRHAVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGKQHV 435

Query: 578 HLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYE---GAEECCKLLFAGIEPLVSQFTASY 637
            L+P E  Q+ GRAGRRGID +GH V++  P E   G      L  A   PL S F  SY
Sbjct: 436 PLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPSEDTSGPSAVAGLASARTFPLRSSFVPSY 487

Query: 638 GMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
            M +NL+                   W + E A  L+EQSF  Y
Sbjct: 496 NMTINLV------------------HWMSPERAHALLEQSFAQY 487

BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match: sp|P9WMR0|HELY_MYCTO (Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=helY PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-82
Identity = 203/539 (37.66%), Postives = 281/539 (52.13%), Query Frame = 0

Query: 146 IIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 205
           + ++D   +   F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 206 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 265
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +APV++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 266 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 325
             +  L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183

Query: 326 QIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLD------EKGARMNRKLSLNYLQLNASG 385
            + G T +V    RPVPL  H      +  L D      E   ++NR+L L ++      
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNREL-LRHIAHRREA 243

Query: 386 DKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKS 445
           D+ + D   RRR   R G                         R    P+VI    +L +
Sbjct: 244 DRMA-DWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDA 303

Query: 446 KDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV-------- 505
           + +LPA+ F+FSR GCDAAV           C RS + L   + R +  + +        
Sbjct: 304 EGLLPAITFVFSRAGCDAAV---------TQCLRSPLRLTSEEERARIAEVIDHRCGDLA 363

Query: 506 -RESAI-------KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP 565
             + A+       +GLL+G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMP
Sbjct: 364 DSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMP 423

Query: 566 ARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLL 625
           ART V+  L K +      L+P E  Q+ GRAGRRGID +GH V++  P     E   L 
Sbjct: 424 ARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLA 481

Query: 626 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
                PL S F  SY M +NL+          M            ++A +L+EQSF  Y
Sbjct: 484 STRTFPLRSSFAPSYNMTINLV--------HRMGP----------QQAHRLLEQSFAQY 481

BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match: sp|P9WMR1|HELY_MYCTU (Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=helY PE=1 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-82
Identity = 203/539 (37.66%), Postives = 281/539 (52.13%), Query Frame = 0

Query: 146 IIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 205
           + ++D   +   F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 206 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 265
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +APV++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 266 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 325
             +  L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183

Query: 326 QIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLD------EKGARMNRKLSLNYLQLNASG 385
            + G T +V    RPVPL  H      +  L D      E   ++NR+L L ++      
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNREL-LRHIAHRREA 243

Query: 386 DKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKS 445
           D+ + D   RRR   R G                         R    P+VI    +L +
Sbjct: 244 DRMA-DWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDA 303

Query: 446 KDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV-------- 505
           + +LPA+ F+FSR GCDAAV           C RS + L   + R +  + +        
Sbjct: 304 EGLLPAITFVFSRAGCDAAV---------TQCLRSPLRLTSEEERARIAEVIDHRCGDLA 363

Query: 506 -RESAI-------KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP 565
             + A+       +GLL+G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMP
Sbjct: 364 DSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMP 423

Query: 566 ARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLL 625
           ART V+  L K +      L+P E  Q+ GRAGRRGID +GH V++  P     E   L 
Sbjct: 424 ARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLA 481

Query: 626 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
                PL S F  SY M +NL+          M            ++A +L+EQSF  Y
Sbjct: 484 STRTFPLRSSFAPSYNMTINLV--------HRMGP----------QQAHRLLEQSFAQY 481

BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match: sp|P35207|SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKI2 PE=1 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 4.6e-78
Identity = 202/617 (32.74%), Postives = 310/617 (50.24%), Query Frame = 0

Query: 128 KWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGK 187
           +W  V  L  ++  F E I      A  + F +D FQ+ AV    +G SV V+A TS+GK
Sbjct: 301 EWAHVVDLNHKIENFDELI---PNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGK 360

Query: 188 TLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVL 247
           T++AE A         +  YT+P+KALSNQKFR+F+ETF D N+GL+TGD  +N DA  L
Sbjct: 361 TVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCL 420

Query: 248 IMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQL 307
           IMTTEILR+MLY+   +      +  V+ ++ DEVHY++D  RG VWEE++I  P+ V+ 
Sbjct: 421 IMTTEILRSMLYRGADL------IRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKF 480

Query: 308 ICLSATVANPDELAGWIGQIHGKTELVTSS-KRPVPLTWHFSTKTSLLPLLDEKGARMNR 367
           I LSATV N  E A WIG+   K   V S+ KRPVPL  +   K  L+P++++    +  
Sbjct: 481 ILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFLEA 540

Query: 368 KLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDI------- 427
               +   LN    K     G+  +T   RG                             
Sbjct: 541 NFRKHKEILNGESAK-----GAPSKTDNGRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 428 --------------------NSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAV 487
                               +   +   P++++    L+ +++LP V F+FS+K C+   
Sbjct: 601 XXXXXXXXXXXXNKRKFFTQDGPSKKTWPEIVN---YLRKRELLPMVVFVFSKKRCEEYA 660

Query: 488 QYIDSSNLLDDCERSEVELALRK--FRIQFPDAVRESAIKG---LLQGVAAHHAGCLPLW 547
            +++  N  ++ E+S++ + + K   R++  D      +K    L +G+A HH G LP+ 
Sbjct: 661 DWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIV 720

Query: 548 KSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGR 607
           K  IE LF +G +KV+FATET A G+N+P RT + +S+ K   NG   L+P E  QMAGR
Sbjct: 721 KELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGR 780

Query: 608 AGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEP-LVSQFTASYGMVLNLLAGAKVTHT 667
           AGRRG+D  G V+++      +    K +  G+   L SQF  +Y M+LNLL        
Sbjct: 781 AGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLL-------- 840

Query: 668 SEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEA 710
                    +A R  E    +++ SF       +    ++++  +++E++ +  + + E 
Sbjct: 841 -------RIEALRVEE----MIKYSFSENAKETLQPEHEKQIKVLQEELQTIEYK-SCEI 880

BLAST of CsaV3_5G025450 vs. TrEMBL
Match: tr|A0A0A0KNK4|A0A0A0KNK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G484640 PE=4 SV=1)

HSP 1 Score: 2245.3 bits (5817), Expect = 0.0e+00
Identity = 1168/1168 (100.00%), Postives = 1168/1168 (100.00%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
            MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60

Query: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
            SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61   SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120

Query: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
            SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121  SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180

Query: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
            APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181  APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240

Query: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
            NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241  NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300

Query: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
            CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301  CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360

Query: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
            GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361  GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420

Query: 421  SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
            SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL
Sbjct: 421  SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480

Query: 481  RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
            RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI
Sbjct: 481  RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540

Query: 541  NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
            NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC
Sbjct: 541  NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600

Query: 601  KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
            KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG
Sbjct: 601  KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660

Query: 661  NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
            NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE
Sbjct: 661  NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720

Query: 721  KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
            KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK
Sbjct: 721  KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780

Query: 781  LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
            LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA
Sbjct: 781  LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840

Query: 841  LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
            LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND
Sbjct: 841  LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900

Query: 901  ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
            ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY
Sbjct: 901  ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960

Query: 961  KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
            KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL
Sbjct: 961  KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020

Query: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
            RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL
Sbjct: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080

Query: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
            QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL
Sbjct: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140

Query: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1169
            PDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1168

BLAST of CsaV3_5G025450 vs. TrEMBL
Match: tr|A0A1S3CQZ5|A0A1S3CQZ5_CUCME (LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503332 PE=4 SV=1)

HSP 1 Score: 2161.7 bits (5600), Expect = 0.0e+00
Identity = 1130/1173 (96.33%), Postives = 1147/1173 (97.78%), Query Frame = 0

Query: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
            MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS     ASRFC HKPLAFYST PV F
Sbjct: 1    MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60

Query: 61   RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
            RPSF SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61   RPSFQSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGEFEQSYDEVELSM 120

Query: 121  DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
            D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121  DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180

Query: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
            SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181  SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241  GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
            GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241  GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
            EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301  EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360

Query: 361  LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
            LLDEKG RMNRKLSLNYLQL+ASG K  KDDGS RRTPKRRGNEISYDNIGSMSRQATLS
Sbjct: 361  LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGS-RRTPKRRGNEISYDNIGSMSRQATLS 420

Query: 421  KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
            KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQY+DSSNLLDDCERSE
Sbjct: 421  KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYVDSSNLLDDCERSE 480

Query: 481  VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
            VELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481  VELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540

Query: 541  LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
            LAAGINMPARTAVIASLSKRSNNGRT LS NELLQMAGRAGRRGID KGHVVLLQTPYEG
Sbjct: 541  LAAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDXKGHVVLLQTPYEG 600

Query: 601  AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
            AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETK FQAWRTLEEARKLV
Sbjct: 601  AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLEEARKLV 660

Query: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
            EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSD+AYNEIAELQE
Sbjct: 661  EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNEIAELQE 720

Query: 721  ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
            ELR EKRHRTELRKEMESQRI ALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN
Sbjct: 721  ELRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780

Query: 781  MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
            MDSSKLGNMFPAD+SLSGAESNL ITLEPG+ESSYYVALGSDNSWYLFTEKWIKTVYKTG
Sbjct: 781  MDSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIKTVYKTG 840

Query: 841  FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
            FPNVAL+KGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS
Sbjct: 841  FPNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900

Query: 901  LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
            LSENDELLQMSQSYMESL+RYKVQRNKVARLKKRIS+TEGFREYKKILDMANL+EDKIRQ
Sbjct: 901  LSENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLVEDKIRQ 960

Query: 961  LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
            LKTRYKRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961  LKTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020

Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
            IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080

Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
            SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140

Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            QIPKLPD+DPSLQ NASTASDVMNRPPISELAG
Sbjct: 1141 QIPKLPDVDPSLQSNASTASDVMNRPPISELAG 1172

BLAST of CsaV3_5G025450 vs. TrEMBL
Match: tr|M5Y8A0|M5Y8A0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G262200 PE=4 SV=1)

HSP 1 Score: 1658.7 bits (4294), Expect = 0.0e+00
Identity = 883/1163 (75.92%), Postives = 989/1163 (85.04%), Query Frame = 0

Query: 23   SYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSDVXXXXXXX 82
            SYP    LT       FC  K    YS   + FR +F SP S F  KSQLSD XXXXXXX
Sbjct: 23   SYPLLHHLTQTTHVLGFCSPKSPPTYSPSSLRFRVTFQSPSSAFPAKSQLSDAXXXXXXX 82

Query: 83   XXXXXXXXXAAEEYDSDAL------GGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLL 142
            XXXXXXXXX       D +       G EQS DE++ SM  +E S   +EFKWQRVEKL 
Sbjct: 83   XXXXXXXXXXXXXXXXDDVPGDIMSDGLEQSDDEIDTSMAAAEPSTRPEEFKWQRVEKLC 142

Query: 143  GEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAV 202
             EV+ FGE +ID +ELAS+Y+FRIDKFQRLA+QAFLRGSSVVVSAPTSSGKTLIAEAAAV
Sbjct: 143  SEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAV 202

Query: 203  ATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRN 262
            ATVAR  RLFYTTPLKALSNQKFREFRETFGD NVGLLTGDSAVNKDA VLIMTTEILRN
Sbjct: 203  ATVARGMRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAVNKDAQVLIMTTEILRN 262

Query: 263  MLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVAN 322
            MLYQSVGMA+S  GLFHVDVIVLDEVHYLSD+ RGTVWEEIVIYCPK+VQLICLSATVAN
Sbjct: 263  MLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVWEEIVIYCPKKVQLICLSATVAN 322

Query: 323  PDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLN 382
            PDELAGWIGQIHGKTELVTSS+RPVPLTWHFSTKTSLLPLLD+ G  MNR+LS+NYLQLN
Sbjct: 323  PDELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKTSLLPLLDKTGKHMNRRLSVNYLQLN 382

Query: 383  ASGDKFSKDDGSRRRTPKRRGNEISY-DNIGSMSRQATLSKNDINSIRRSNVPQVIDTLW 442
            ASG K  KDDGSRRR+ +RR +E+SY D+ G+MSR+  LSKNDIN I RS VPQ+ DTLW
Sbjct: 383  ASGTKSYKDDGSRRRSSRRRASEMSYDDSTGNMSRR-PLSKNDINLIHRSQVPQITDTLW 442

Query: 443  QLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESA 502
             LKS+DMLPA+WFIFSRKGCDAAVQY+  +NLLDDCE SEV+LAL++FRI++PDA+RE+A
Sbjct: 443  HLKSRDMLPAIWFIFSRKGCDAAVQYVQDNNLLDDCEMSEVQLALKRFRIKYPDAIRETA 502

Query: 503  IKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKR 562
            +KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA+IASLSKR
Sbjct: 503  VKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAIIASLSKR 562

Query: 563  SNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFT 622
            S++GRT LSPNEL QMAGRAGRRGID++GHVVL+Q+PYEGAE CCK++FAG+EPLVSQFT
Sbjct: 563  SDSGRTQLSPNELFQMAGRAGRRGIDERGHVVLVQSPYEGAEACCKIVFAGLEPLVSQFT 622

Query: 623  ASYGMVLNLLAGAKVT-HTSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEE 682
            ASYGMVLNLLAGAK T  ++E D+T+A Q+ RTLEEARKLVEQSFGNYVGSNVMLAAKEE
Sbjct: 623  ASYGMVLNLLAGAKFTSRSNESDDTEASQSGRTLEEARKLVEQSFGNYVGSNVMLAAKEE 682

Query: 683  LVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQ 742
            L +I+KEIE+L LEI+D+AIDRKSRK LS  AY EIA+LQEELR EKR RTELR+ MESQ
Sbjct: 683  LTRIQKEIEILTLEISDDAIDRKSRKLLSGPAYKEIADLQEELRAEKRLRTELRRRMESQ 742

Query: 743  RICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADSSL 802
            ++ +L  +L    DGHLPFLCLQYKDSEGVQHSIP V LG +DS   SKL +M  AD + 
Sbjct: 743  KLSSLRPMLEEFEDGHLPFLCLQYKDSEGVQHSIPAVYLGKVDSFSRSKLKHMVSADDAF 802

Query: 803  ------SGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGD 862
                  S  ESNL        E SYYVALGSDNSWYLFTEKWIKT+YKTGFPNVAL+ GD
Sbjct: 803  ALNAVTSEFESNLVF------EPSYYVALGSDNSWYLFTEKWIKTIYKTGFPNVALALGD 862

Query: 863  ALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQM 922
            ALPREIM  LLDK  +KWEKLA+SELG    MEGSLETWSWSLNVPVLNSLSE+DELL  
Sbjct: 863  ALPREIMSMLLDKTELKWEKLAESELGGFWNMEGSLETWSWSLNVPVLNSLSEHDELLHK 922

Query: 923  SQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSN 982
            S++Y  +++RYK QRNKV+RLKK+IS+T+GFREYKKI+DMA   E+KI++LK R +RL+N
Sbjct: 923  SEAYHNAVERYKDQRNKVSRLKKKISRTQGFREYKKIVDMAKFTEEKIKRLKGRSRRLTN 982

Query: 983  RIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFL 1042
            RI+QIEPSGWKEFLQISNVIHE RALDINTHVMFPLG TAAAIRGENELW+AMVLRNK L
Sbjct: 983  RIEQIEPSGWKEFLQISNVIHETRALDINTHVMFPLGVTAAAIRGENELWLAMVLRNKIL 1042

Query: 1043 VQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHG 1102
            + LKP ELAAVCASLVSEGIK+RP +NNSYI+EPS TV++++NFL+EQR+S   LQEKHG
Sbjct: 1043 IDLKPPELAAVCASLVSEGIKIRPWKNNSYIYEPSSTVVDVVNFLDEQRSSFLQLQEKHG 1102

Query: 1103 VNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDP 1162
            VN  C LD+QFSGMVEAW SGLTW+EIMMDCAMDEGDLARLLRRTIDLL QIPKLPDIDP
Sbjct: 1103 VNKPCYLDTQFSGMVEAWVSGLTWKEIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDIDP 1162

Query: 1163 SLQRNASTASDVMNRPPISELAG 1169
             LQ NA TAS++M+RPPISELAG
Sbjct: 1163 LLQSNAKTASNIMDRPPISELAG 1178

BLAST of CsaV3_5G025450 vs. TrEMBL
Match: tr|A0A2P5BYB1|A0A2P5BYB1_9ROSA (DEAD-box ATP-dependent RNA helicase ISE OS=Trema orientalis OX=63057 GN=TorRG33x02_304350 PE=4 SV=1)

HSP 1 Score: 1640.6 bits (4247), Expect = 0.0e+00
Identity = 872/1139 (76.56%), Postives = 975/1139 (85.60%), Query Frame = 0

Query: 39   FCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSD---VXXXXXXXXXXXXXXXXAAEE 98
            FC  K L   S R   FR SF S  S FS + QLSD    XXXXXXXXXXXXXXXX    
Sbjct: 40   FCTPKSLPPNSLR---FRASFKSRSSTFSAQPQLSDXXXXXXXXXXXXXXXXXXXXXXXX 99

Query: 99   YDSDALGGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASV 158
               D   G +QS DE+E S   +E    ++EFKWQRVEK   EVREFG  IIDVDELASV
Sbjct: 100  XSGDFSEGLDQSDDEIEFS---AEAPARTEEFKWQRVEKFRNEVREFGNEIIDVDELASV 159

Query: 159  YNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALS 218
            Y+FRIDKFQRLA++AFL+GSSVVVSAPTSSGKTLIAEAAA+AT+AR RRLFYTTPLKALS
Sbjct: 160  YDFRIDKFQRLAIKAFLKGSSVVVSAPTSSGKTLIAEAAAIATIARGRRLFYTTPLKALS 219

Query: 219  NQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVD 278
            NQKFREFRETF DS+VGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGM +S   LFHVD
Sbjct: 220  NQKFREFRETFKDSDVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMVSSGHSLFHVD 279

Query: 279  VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVT 338
            VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVT
Sbjct: 280  VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTELVT 339

Query: 339  SSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKR 398
            SSKRPVPLTWHFSTKTSLLPLLDE G +MNRKLSLNYLQLNASG + S+DD SRR+  ++
Sbjct: 340  SSKRPVPLTWHFSTKTSLLPLLDETGTKMNRKLSLNYLQLNASGMRSSRDD-SRRKNSRK 399

Query: 399  RGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGC 458
            R NE++YD  G+       SKNDI+++RRS VPQ+ DTLWQLK++DMLPAVWFIFSRKGC
Sbjct: 400  RANEMTYDYDGTRCNGQPFSKNDISAMRRSQVPQIADTLWQLKARDMLPAVWFIFSRKGC 459

Query: 459  DAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWK 518
            DAAVQY++  NLLD+CE SEVELAL++FR+Q+PDAVR++A+KGL QGVAAHHAGCLPLWK
Sbjct: 460  DAAVQYLEDHNLLDECEMSEVELALKRFRVQYPDAVRQTAVKGLRQGVAAHHAGCLPLWK 519

Query: 519  SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRA 578
            SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRS++GR HLSPNELLQMAGRA
Sbjct: 520  SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSDSGRIHLSPNELLQMAGRA 579

Query: 579  GRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSE 638
            GRRGID +GHVVL+QTPYEGAEEC K+LFAG+EPLVSQFTASYGMVLNLLAGAKVT  S 
Sbjct: 580  GRRGIDDRGHVVLVQTPYEGAEECTKVLFAGLEPLVSQFTASYGMVLNLLAGAKVTRRSN 639

Query: 639  MDE-TKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAI 698
            + E  KAFQA RTLEEARKLVEQSFGNYV SNVMLAA+EEL KI+KEIEML  E++DEAI
Sbjct: 640  VSEDAKAFQAGRTLEEARKLVEQSFGNYVSSNVMLAAREELTKIKKEIEMLTSELSDEAI 699

Query: 699  DRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFL 758
            DRKSRK LS+ AY EI +LQEELR +KR RTELR++MESQ+I +L  LL    +G LPFL
Sbjct: 700  DRKSRKLLSEAAYKEITDLQEELRAQKRLRTELRRKMESQKILSLKPLLEEFENGQLPFL 759

Query: 759  CLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADS--SLSGAESNLGITLEPGAESS 818
            CLQYKD EGVQH++P V LG +DS   SKL  M   +   SL+  E       EP  E S
Sbjct: 760  CLQYKDPEGVQHAVPAVYLGKVDSLEGSKLKKMVTDEDAFSLNDREKESDSDAEPSLEPS 819

Query: 819  YYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADS 878
            YYVALGSDNSWY+FTEKWIKTVYKTGFPNVAL++GD LPREIMR LLDKE MKW+KL+DS
Sbjct: 820  YYVALGSDNSWYIFTEKWIKTVYKTGFPNVALAQGDPLPREIMRMLLDKEDMKWDKLSDS 879

Query: 879  ELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKR 938
            E G + CMEGSLETWSWSLNVPVLNSLSENDELL  S++Y  +++RYK QR KVARLKK+
Sbjct: 880  EFGGVWCMEGSLETWSWSLNVPVLNSLSENDELLHTSEAYHGAVERYKQQRTKVARLKKK 939

Query: 939  ISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIR 998
            IS+TEGF+EYKK++DM  L E+KI++LK R +RL+NRI+QIEPSGWKEFLQISNVIHE R
Sbjct: 940  ISRTEGFKEYKKVIDMTKLTEEKIKRLKARSRRLTNRIEQIEPSGWKEFLQISNVIHENR 999

Query: 999  ALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRP 1058
            ALDINTHV+FPLGETAAAIRGENELW+AMVLRNK L +LKP +LAAV ASLVSEGIKVRP
Sbjct: 1000 ALDINTHVIFPLGETAAAIRGENELWLAMVLRNKVLTELKPAQLAAVLASLVSEGIKVRP 1059

Query: 1059 GRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTW 1118
             +NNSYI+EP+  V+N+I+FL EQR+SL  LQEKHGV+I CCLDSQF+GMVEAWASGLTW
Sbjct: 1060 WKNNSYIYEPTPVVLNVISFLNEQRSSLIQLQEKHGVSIVCCLDSQFAGMVEAWASGLTW 1119

Query: 1119 REIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
            RE+MMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP LQ NA  AS+VM+RPPISELAG
Sbjct: 1120 REMMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLQSNARAASEVMDRPPISELAG 1171

BLAST of CsaV3_5G025450 vs. TrEMBL
Match: tr|A0A2P5BCN2|A0A2P5BCN2_PARAD (DEAD-box ATP-dependent RNA helicase ISE OS=Parasponia andersonii OX=3476 GN=PanWU01x14_250740 PE=4 SV=1)

HSP 1 Score: 1622.4 bits (4200), Expect = 0.0e+00
Identity = 863/1142 (75.57%), Postives = 969/1142 (84.85%), Query Frame = 0

Query: 39   FCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAA----- 98
            FC  K L   S R   FR SF S  S F+ + QL   XXXXXXXXXXXXXXXX       
Sbjct: 40   FCTPKSLPPNSLR---FRASFKSRSSTFTAQPQLXXXXXXXXXXXXXXXXXXXXXXXXXX 99

Query: 99   -EEYDSDALGGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDEL 158
             ++   D   G +QS DE+E S   +E    +++FKWQRVEK   EVREFG  IIDVDEL
Sbjct: 100  YDDVSGDFSEGLDQSDDEIEFS---AEAPARTEQFKWQRVEKFRNEVREFGNEIIDVDEL 159

Query: 159  ASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 218
            ASVY+FRIDKFQRLA++AFL+GSSVVVSAPTSSGKTLIAEAAA+AT+AR RRLFYTTPLK
Sbjct: 160  ASVYDFRIDKFQRLAIKAFLKGSSVVVSAPTSSGKTLIAEAAAIATIARGRRLFYTTPLK 219

Query: 219  ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 278
            ALSNQKFREFRETF DS+VGLLTGDSAVNKDA V+IMTTEILRNMLYQSVGM +S   LF
Sbjct: 220  ALSNQKFREFRETFQDSDVGLLTGDSAVNKDAQVVIMTTEILRNMLYQSVGMVSSGHSLF 279

Query: 279  HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTE 338
            HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTE
Sbjct: 280  HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTE 339

Query: 339  LVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRT 398
            LVTSSKRPVPLTWHFSTKTSLLPLLDE G +MNRKLSLNYLQLNASG + S+DD SRR+ 
Sbjct: 340  LVTSSKRPVPLTWHFSTKTSLLPLLDETGTKMNRKLSLNYLQLNASGIRSSRDD-SRRKN 399

Query: 399  PKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSR 458
             ++R NE++YD   + S    LSKNDI++IRRS VPQ+ DTLWQLK++DMLPAVWFIFSR
Sbjct: 400  SRKRANEMTYDYDATRSNGQPLSKNDISAIRRSQVPQIADTLWQLKARDMLPAVWFIFSR 459

Query: 459  KGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLP 518
            KGCDAAVQY++  NLLD+CE SEVELAL++FR+Q+PDAVR+ A+KGL QGVAAHHAGCLP
Sbjct: 460  KGCDAAVQYLEDHNLLDECEMSEVELALKRFRVQYPDAVRQIAVKGLRQGVAAHHAGCLP 519

Query: 519  LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMA 578
            LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASL KRS++GR HLSPNELLQMA
Sbjct: 520  LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLGKRSDSGRIHLSPNELLQMA 579

Query: 579  GRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTH 638
            GRAGRRGID  GHVVL+QTPYEGAEEC K+LFAG+EPLVSQFTASYGMVLNLLAGAKVT 
Sbjct: 580  GRAGRRGIDDNGHVVLVQTPYEGAEECTKVLFAGLEPLVSQFTASYGMVLNLLAGAKVTR 639

Query: 639  TSEMDE-TKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITD 698
             S + E  KAFQA RTLEEARKLVEQSFGNYV SNVMLAA+EEL KI+KEIEML  E++D
Sbjct: 640  RSNVSEDAKAFQAGRTLEEARKLVEQSFGNYVSSNVMLAAREELTKIKKEIEMLTSELSD 699

Query: 699  EAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHL 758
            EAIDRKSRK LS+ AY EI +LQEELR +KR RTELR++MESQ+I +L  LL    +G L
Sbjct: 700  EAIDRKSRKLLSEAAYKEITDLQEELRAQKRLRTELRRKMESQKIISLKPLLEEFENGQL 759

Query: 759  PFLCLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADS--SLSGAESNLGITLEPGA 818
            PFLCLQYKD EGVQH++P V L  +DS   SKL  M   +   SL+  E       EP  
Sbjct: 760  PFLCLQYKDPEGVQHAVPAVYLRKVDSLEGSKLKKMVTDEDAFSLNDTEKESDSDAEPSL 819

Query: 819  ESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKL 878
            E SYYVALGSDNSWY+FTEKWIKTVYKTGFPNVAL++GD LPREIMR LLDKE MKW+KL
Sbjct: 820  EPSYYVALGSDNSWYIFTEKWIKTVYKTGFPNVALAQGDPLPREIMRMLLDKEDMKWDKL 879

Query: 879  ADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARL 938
            +DSE G + CMEGSLETWSWSLNVPVLNSLSE+DELL  S++Y  +++RYK QR KVARL
Sbjct: 880  SDSEFGGVWCMEGSLETWSWSLNVPVLNSLSESDELLHTSEAYHGAVERYKQQRTKVARL 939

Query: 939  KKRISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIH 998
            KK+IS+TEGF+EYKK++DM  L E+K+++LK R +RL+NRI+QIEPSGWKEFLQISNVIH
Sbjct: 940  KKKISRTEGFKEYKKVIDMTKLTEEKMKRLKARSRRLTNRIEQIEPSGWKEFLQISNVIH 999

Query: 999  EIRALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIK 1058
            E RALDINTHV+FPLGETAAAIRGENELW+AM LRNK L +LKP +LAAV ASLVSEGIK
Sbjct: 1000 ESRALDINTHVIFPLGETAAAIRGENELWLAMALRNKVLTELKPAQLAAVLASLVSEGIK 1059

Query: 1059 VRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASG 1118
            VRP +NNSYI+EP+  V+N+I+FL  QR+SL  LQEKHGVNI  CLDSQF+GMVEAWASG
Sbjct: 1060 VRPWKNNSYIYEPTSVVLNVISFLNGQRSSLVQLQEKHGVNIDSCLDSQFAGMVEAWASG 1119

Query: 1119 LTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISEL 1169
            LTWRE+MMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP LQ NA  AS+VM+RPPISEL
Sbjct: 1120 LTWREMMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLQSNARAASEVMDRPPISEL 1174

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655295.10.0e+00100.00PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [C... [more]
XP_011655294.10.0e+0099.24PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [C... [more]
XP_008465717.20.0e+0096.33PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chlor... [more]
XP_022150310.10.0e+0089.60DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Momordica charantia][more]
XP_022946499.10.0e+0088.74DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G70070.10.0e+0071.60DEAD/DEAH box helicase, putative[more]
AT3G46960.12.0e-7134.33RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT1G59760.18.6e-6734.99RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT2G06990.16.2e-6531.26RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT4G32700.26.0e-2024.35helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed ... [more]
Match NameE-valueIdentityDescription
sp|B9DFG3|ISE2_ARATH0.0e+0071.60DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana... [more]
sp|Q9ZBD8|HELY_MYCLE3.5e-8639.31Probable helicase HelY OS=Mycobacterium leprae (strain TN) OX=272631 GN=helY PE=... [more]
sp|P9WMR0|HELY_MYCTO1.4e-8237.66Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)... [more]
sp|P9WMR1|HELY_MYCTU1.4e-8237.66Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)... [more]
sp|P35207|SKI2_YEAST4.6e-7832.74Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KNK4|A0A0A0KNK4_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G484640 PE=4 SV=1[more]
tr|A0A1S3CQZ5|A0A1S3CQZ5_CUCME0.0e+0096.33LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS... [more]
tr|M5Y8A0|M5Y8A0_PRUPE0.0e+0075.92Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G262200 PE=4 SV=1[more]
tr|A0A2P5BYB1|A0A2P5BYB1_9ROSA0.0e+0076.56DEAD-box ATP-dependent RNA helicase ISE OS=Trema orientalis OX=63057 GN=TorRG33x... [more]
tr|A0A2P5BCN2|A0A2P5BCN2_PARAD0.0e+0075.57DEAD-box ATP-dependent RNA helicase ISE OS=Parasponia andersonii OX=3476 GN=PanW... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR012961Ski2_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016556 mRNA modification
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:0016441 posttranscriptional gene silencing
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0010494 cytoplasmic stress granule
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004386 helicase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G025450.1CsaV3_5G025450.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 703..730
NoneNo IPR availableCOILSCoilCoilcoord: 668..688
NoneNo IPR availableCOILSCoilCoilcoord: 946..966
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 340..608
e-value: 7.4E-54
score: 184.6
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 143..339
e-value: 1.5E-62
score: 212.2
NoneNo IPR availableGENE3DG3DSA:1.10.3380.30coord: 971..1160
e-value: 1.3E-32
score: 115.4
NoneNo IPR availableGENE3DG3DSA:1.20.1500.20coord: 896..970
e-value: 1.3E-32
score: 115.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1145..1168
NoneNo IPR availablePANTHERPTHR24031:SF360DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTICcoord: 138..1143
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 138..1143
NoneNo IPR availableCDDcd00046DEXDccoord: 175..313
e-value: 4.23168E-20
score: 88.1632
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 993..1167
e-value: 1.0E-51
score: 187.8
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 1000..1163
e-value: 3.6E-33
score: 114.5
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 493..579
e-value: 2.6E-12
score: 56.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 518..579
e-value: 6.8E-5
score: 23.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 426..625
score: 10.698
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 493..589
e-value: 6.44649E-11
score: 60.7145
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 156..346
e-value: 3.1E-31
score: 119.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 168..332
score: 24.172
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 163..315
e-value: 1.5E-19
score: 70.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 499..592
coord: 409..464
coord: 169..317