BLAST of CsaV3_5G025450 vs. NCBI nr
Match:
XP_011655295.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [Cucumis sativus] >KGN51183.1 hypothetical protein Csa_5G484640 [Cucumis sativus])
HSP 1 Score: 2245.3 bits (5817), Expect = 0.0e+00
Identity = 1168/1168 (100.00%), Postives = 1168/1168 (100.00%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
Query: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
Query: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
Query: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
Query: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
Query: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
Query: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
Query: 421 SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL
Sbjct: 421 SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
Query: 481 RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI
Sbjct: 481 RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
Query: 541 NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC
Sbjct: 541 NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
Query: 601 KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG
Sbjct: 601 KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
Query: 661 NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE
Sbjct: 661 NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
Query: 721 KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK
Sbjct: 721 KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
Query: 781 LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA
Sbjct: 781 LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
Query: 841 LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND
Sbjct: 841 LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
Query: 901 ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY
Sbjct: 901 ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
Query: 961 KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL
Sbjct: 961 KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
Query: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL
Sbjct: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
Query: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL
Sbjct: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
Query: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1169
PDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1168
BLAST of CsaV3_5G025450 vs. NCBI nr
Match:
XP_011655294.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Cucumis sativus])
HSP 1 Score: 2237.6 bits (5797), Expect = 0.0e+00
Identity = 1168/1177 (99.24%), Postives = 1168/1177 (99.24%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
Query: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
Query: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
Query: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
Query: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
Query: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
Query: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
Query: 421 SIRRSN---------VPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC 480
SIRRSN VPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC
Sbjct: 421 SIRRSNVLGWLLSFQVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDC 480
Query: 481 ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF 540
ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF
Sbjct: 481 ERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF 540
Query: 541 ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT 600
ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT
Sbjct: 541 ATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQT 600
Query: 601 PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA 660
PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA
Sbjct: 601 PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEA 660
Query: 661 RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA 720
RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA
Sbjct: 661 RKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIA 720
Query: 721 ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV 780
ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV
Sbjct: 721 ELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTV 780
Query: 781 LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV 840
LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV
Sbjct: 781 LLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTV 840
Query: 841 YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP 900
YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP
Sbjct: 841 YKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVP 900
Query: 901 VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED 960
VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED
Sbjct: 901 VLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIED 960
Query: 961 KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE 1020
KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE
Sbjct: 961 KIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGE 1020
Query: 1021 NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE 1080
NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE
Sbjct: 1021 NELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLE 1080
Query: 1081 EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1140
EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI
Sbjct: 1081 EQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTI 1140
Query: 1141 DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 DLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1177
BLAST of CsaV3_5G025450 vs. NCBI nr
Match:
XP_008465717.2 (PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucumis melo])
HSP 1 Score: 2161.7 bits (5600), Expect = 0.0e+00
Identity = 1130/1173 (96.33%), Postives = 1147/1173 (97.78%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS ASRFC HKPLAFYST PV F
Sbjct: 1 MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
Query: 61 RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
RPSF SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61 RPSFQSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGEFEQSYDEVELSM 120
Query: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
Query: 361 LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
LLDEKG RMNRKLSLNYLQL+ASG K KDDGS RRTPKRRGNEISYDNIGSMSRQATLS
Sbjct: 361 LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGS-RRTPKRRGNEISYDNIGSMSRQATLS 420
Query: 421 KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQY+DSSNLLDDCERSE
Sbjct: 421 KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYVDSSNLLDDCERSE 480
Query: 481 VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
VELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481 VELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
Query: 541 LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
LAAGINMPARTAVIASLSKRSNNGRT LS NELLQMAGRAGRRGID KGHVVLLQTPYEG
Sbjct: 541 LAAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDXKGHVVLLQTPYEG 600
Query: 601 AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETK FQAWRTLEEARKLV
Sbjct: 601 AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLEEARKLV 660
Query: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSD+AYNEIAELQE
Sbjct: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNEIAELQE 720
Query: 721 ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
ELR EKRHRTELRKEMESQRI ALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN
Sbjct: 721 ELRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
Query: 781 MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
MDSSKLGNMFPAD+SLSGAESNL ITLEPG+ESSYYVALGSDNSWYLFTEKWIKTVYKTG
Sbjct: 781 MDSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
Query: 841 FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
FPNVAL+KGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS
Sbjct: 841 FPNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
Query: 901 LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
LSENDELLQMSQSYMESL+RYKVQRNKVARLKKRIS+TEGFREYKKILDMANL+EDKIRQ
Sbjct: 901 LSENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLVEDKIRQ 960
Query: 961 LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
LKTRYKRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961 LKTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140
Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
QIPKLPD+DPSLQ NASTASDVMNRPPISELAG
Sbjct: 1141 QIPKLPDVDPSLQSNASTASDVMNRPPISELAG 1172
BLAST of CsaV3_5G025450 vs. NCBI nr
Match:
XP_022150310.1 (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Momordica charantia])
HSP 1 Score: 2013.8 bits (5216), Expect = 0.0e+00
Identity = 1051/1173 (89.60%), Postives = 1110/1173 (94.63%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
MA PAIN YS I+ +HL PPLSYPFP+F+ PH S SRFC KPL S PV F
Sbjct: 1 MASPAINAYS-IAPKHLW-PPLSYPFPTFICPHCSTPPIQTSRFCRLKPLTICSPYPVRF 60
Query: 61 RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXX AEEYDSDALGGFEQSYDEV+LS+
Sbjct: 61 RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXXAEEYDSDALGGFEQSYDEVDLSI 120
Query: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
+T+EIS ++FKWQRVEKLL EVREFGE I+DVDELAS+YNFRIDKFQRLAVQAFLRGS
Sbjct: 121 ETTEISTPPEDFKWQRVEKLLSEVREFGEEIVDVDELASIYNFRIDKFQRLAVQAFLRGS 180
Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG++NVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGENNVGLLT 240
Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
GDSAVNKDA +LIMTTEILRNMLYQSVGMA+SASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAQILIMTTEILRNMLYQSVGMASSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
EIVIYCPKEVQLICLSATVANPDELAGWIGQIHG+TELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGQTELVTSSKRPVPLTWHFSTKTSLLP 360
Query: 361 LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
LLDEKG RMNRKLSLNYLQL+ASG K KDDGSRRR PKR GNEISYD+ SMSRQATLS
Sbjct: 361 LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISYDSTSSMSRQATLS 420
Query: 421 KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
KNDIN+IRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+ NLLD+CERSE
Sbjct: 421 KNDINTIRRSNVPQVMDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGRNLLDECERSE 480
Query: 481 VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
VELALR+FRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481 VELALRRFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
Query: 541 LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
LAAGINMPAR+AVIASLSKRSNNGRT LS NELLQMAGRAGRRGID+KGHVVL+QTPYEG
Sbjct: 541 LAAGINMPARSAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDQKGHVVLIQTPYEG 600
Query: 601 AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
AEECCK+LFAGIEPLVSQFTASYGMVLNLLAGAKVTH+SE+DETKAF A RTLEEARKLV
Sbjct: 601 AEECCKILFAGIEPLVSQFTASYGMVLNLLAGAKVTHSSEIDETKAFLAGRTLEEARKLV 660
Query: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
EQSFGNYVGSNVMLAAKEELVKIEKEI+MLNLEIT+EAIDRKSRKFLS++AYNEIAELQE
Sbjct: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIKMLNLEITEEAIDRKSRKFLSEVAYNEIAELQE 720
Query: 721 ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
ELR EKRHRTELRKEME QRI AL SLL+NLGDGHLPFLCLQYKDSEGVQHS+P VLLGN
Sbjct: 721 ELRSEKRHRTELRKEMELQRIYALKSLLQNLGDGHLPFLCLQYKDSEGVQHSVPAVLLGN 780
Query: 781 MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
MDSSK NMFP D++LS AESNLGI L+PGAESSYYVALGSDNSWYLFTEKWI+TVYKTG
Sbjct: 781 MDSSKFNNMFPVDNALSAAESNLGINLDPGAESSYYVALGSDNSWYLFTEKWIRTVYKTG 840
Query: 841 FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
FPNVAL+KGDALPRE+MR+LLDKEGM WEKLADSELGSL+CMEGSLETWSWSLNVPVLNS
Sbjct: 841 FPNVALTKGDALPRELMRTLLDKEGMXWEKLADSELGSLSCMEGSLETWSWSLNVPVLNS 900
Query: 901 LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
LSENDELLQMS SYMESL+RYK QRN+VARLKKRI++TEGFREYKK+LDMAN+IEDKIRQ
Sbjct: 901 LSENDELLQMSSSYMESLERYKEQRNRVARLKKRIARTEGFREYKKVLDMANIIEDKIRQ 960
Query: 961 LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
LK R KRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961 LKARSKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
IAMVLRNKFLVQLKPTELAAVCASLVSEGIK+RPGRNNSYIFEPS TV+NMI+FLEEQR+
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKIRPGRNNSYIFEPSTTVMNMIDFLEEQRS 1080
Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
SL LQEKHGV+I CCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLLHLQEKHGVDIPCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140
Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
QIPKLPDIDPSLQ NASTAS+VMNRPPISELAG
Sbjct: 1141 QIPKLPDIDPSLQSNASTASNVMNRPPISELAG 1171
BLAST of CsaV3_5G025450 vs. NCBI nr
Match:
XP_022946499.1 (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucurbita moschata])
HSP 1 Score: 1984.1 bits (5139), Expect = 0.0e+00
Identity = 1048/1181 (88.74%), Postives = 1091/1181 (92.38%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFL-----TPHYSASRFCPHKPLAFYSTRPVPF 60
MA PAINV+SIIS QHL PPLSYPFPS L +P A RFC KPL + PVPF
Sbjct: 1 MASPAINVFSIISPQHLW-PPLSYPFPSSLCSRCSSPPIQAPRFCRLKPLPIFYPFPVPF 60
Query: 61 RPSFHSPRSIFSEKSQLSDV--------XXXXXXXXXXXXXXXXAAEEYDSDALGGFEQS 120
RPS SPRSIFSEK QLSDV XXXXXXXXXXXXXXXX AEEYD DA G EQ
Sbjct: 61 RPSVRSPRSIFSEKPQLSDVXXXXXXXXXXXXXXXXXXXXXXXXXAEEYDIDAFGELEQR 120
Query: 121 YDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA 180
YDEVELSM+ +EIS A +EFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR A
Sbjct: 121 YDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQA 180
Query: 181 VQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG 240
++AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG
Sbjct: 181 IEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFG 240
Query: 241 DSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSD 300
DSNVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSD
Sbjct: 241 DSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSD 300
Query: 301 ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHF 360
ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPLTWHF
Sbjct: 301 ISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLTWHF 360
Query: 361 STKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGS 420
STKTSLLPLLDEKG MNRKLSLNYLQL+ASG K KDDGSRRR PKR GNEIS D S
Sbjct: 361 STKTSLLPLLDEKGKHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISNDRTSS 420
Query: 421 MSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNL 480
+SRQATLSKNDINSIRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+ NL
Sbjct: 421 LSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNL 480
Query: 481 LDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLV 540
LDDCERSEVELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLV
Sbjct: 481 LDDCERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLV 540
Query: 541 KVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVV 600
KVVFATETLAAGINMPARTAVIASLSKRSN+GRT L+ NELLQMAGRAGRRGIDKKGHVV
Sbjct: 541 KVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVV 600
Query: 601 LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRT 660
LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TKAFQA RT
Sbjct: 601 LLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRT 660
Query: 661 LEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAY 720
LEEARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+ +SD+AY
Sbjct: 661 LEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAY 720
Query: 721 NEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHS 780
NE+ ELQE LR +KR RTELRKEME QRICA SLL+NLGDG LPFLCLQYKDSEGVQHS
Sbjct: 721 NELVELQEGLRSDKRQRTELRKEMELQRICAFKSLLQNLGDGQLPFLCLQYKDSEGVQHS 780
Query: 781 IPTVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKW 840
IP VL GNMDSSKL NMFPAD+SLSGAE N G L+PGAESSYYVALGSDNSWYLFTEKW
Sbjct: 781 IPAVLFGNMDSSKLINMFPADNSLSGAEPNFGKNLDPGAESSYYVALGSDNSWYLFTEKW 840
Query: 841 IKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWS 900
IKTVYKTGFPNVAL+KGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGSLETWSWS
Sbjct: 841 IKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWS 900
Query: 901 LNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMAN 960
LNVPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRIS+T+GFREYKKILDMAN
Sbjct: 901 LNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMAN 960
Query: 961 LIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAA 1020
+IEDKIRQLK RYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDIN+HVMFPLGETAAA
Sbjct: 961 IIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAA 1020
Query: 1021 IRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMI 1080
IRGENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPSRTVINM+
Sbjct: 1021 IRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMV 1080
Query: 1081 NFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLL 1140
NFLEEQRNSL DLQEKHGVNI C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARL
Sbjct: 1081 NFLEEQRNSLLDLQEKHGVNIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLF 1140
Query: 1141 RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNR PISELAG
Sbjct: 1141 RRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1180
BLAST of CsaV3_5G025450 vs. TAIR10
Match:
AT1G70070.1 (DEAD/DEAH box helicase, putative)
HSP 1 Score: 1494.9 bits (3869), Expect = 0.0e+00
Identity = 764/1067 (71.60%), Postives = 908/1067 (85.10%), Query Frame = 0
Query: 112 ELSMD-TSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQA 171
E S+D +E + EF+WQRVEKL VR+FG +ID+DEL S+Y+FRIDKFQRLA++A
Sbjct: 106 EFSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEA 165
Query: 172 FLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSN 231
FLRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD N
Sbjct: 166 FLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDN 225
Query: 232 VGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 291
VGLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISR
Sbjct: 226 VGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISR 285
Query: 292 GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTK 351
GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTS++RPVPLTW+FSTK
Sbjct: 286 GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTK 345
Query: 352 TSLLPLLDEKGARMNRKLSLNYLQLNASGDKF-SKDDGSRRRTPKRRGNEISYDNIGSMS 411
SLLPLLDEKG +NRKLSLNYLQL+AS +F DDG R+R K+RG + SY+N+ +++
Sbjct: 346 HSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT 405
Query: 412 RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 471
LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+++ LLD
Sbjct: 406 -DYPLSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLD 465
Query: 472 DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 531
DCE+SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 466 DCEKSEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKV 525
Query: 532 VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 591
VFATETLAAGINMPARTAVI+SLSK++ N R L PNEL QMAGRAGRRGID+KG+ VL+
Sbjct: 526 VFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV 585
Query: 592 QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDET-KAFQAWRTL 651
QT +EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT S E K QA R+L
Sbjct: 586 QTAFEGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSL 645
Query: 652 EEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYN 711
EEA+KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAID+KSRK LS Y
Sbjct: 646 EEAKKLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYK 705
Query: 712 EIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSI 771
EI L+EELR EK AL LL+ + +G+LPF+CL++KDSEG + S+
Sbjct: 706 EITVLKEELREEKXXXXXXXXXXXXXXXLALKPLLKGMEEGNLPFICLEFKDSEGREQSV 765
Query: 772 PTVLLGNMDS---SKLGNMFPADSS--LSGAESNLGITL--EPGAESSYYVALGSDNSWY 831
P V LG++DS SKL M D S L+ E L +P + SYYVALGSDNSWY
Sbjct: 766 PAVYLGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEPGKPNVKPSYYVALGSDNSWY 825
Query: 832 LFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSL 891
LFTEKW++TVY+TGFPN+AL+ GDALPREIM++LLDK M+W+KLA+SELGSL +EGSL
Sbjct: 826 LFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGSL 885
Query: 892 ETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKK 951
ETWSWSLNVPVL+SLS+ DE+L MS+ Y + +YK QR+K++RLKK++S++EGFREYKK
Sbjct: 886 ETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKK 945
Query: 952 ILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPL 1011
IL+ ANL +K+++LK R +RL NR++QIEPSGWK+F++ISNVIHE RALDINTH++FPL
Sbjct: 946 ILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPL 1005
Query: 1012 GETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSR 1071
GETAAAIRGENELW+AMVLRNK LV LKP +LA VCASLVSEGIKVRP R+N+YI+EPS
Sbjct: 1006 GETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSD 1065
Query: 1072 TVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEG 1131
TV++M+NFLE+QR+SL LQEKH V I CCLD QFSGMVEAWASGL+W+E+MM+CAMDEG
Sbjct: 1066 TVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDEG 1125
Query: 1132 DLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
DLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+RPPISELAG
Sbjct: 1126 DLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171
BLAST of CsaV3_5G025450 vs. TAIR10
Match:
AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)
HSP 1 Score: 268.5 bits (685), Expect = 2.0e-71
Identity = 183/533 (34.33%), Postives = 282/533 (52.91%), Query Frame = 0
Query: 149 VDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYT 208
V ++A + F +D FQ+ A+ +G SV V+A TS+GKT++AE A R YT
Sbjct: 350 VPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 409
Query: 209 TPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSA 268
P+K +SNQK+R+F G +VGLLTGD ++ +A LIMTTEILR+MLY+ A
Sbjct: 410 APIKTISNQKYRDF---CGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYR------GA 469
Query: 269 SGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIH 328
+ ++ ++ DEVHY++D+ RG VWEE++I P+ + + LSATV N E A WIG+
Sbjct: 470 DIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTK 529
Query: 329 GKTELVT-SSKRPVPLTWHFSTKTSLLPLLD-----EKGAR----MNRKLSLNYLQLNAS 388
K VT ++KRPVPL L + + KG + +K + N + +
Sbjct: 530 QKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPK 589
Query: 389 GDKFSK--DDGSR--RRTPKRRGNEISYDNIGSMSRQATLSKNDIN-SIRRSNVPQVIDT 448
S DGS+ + RG + + ++ + + + + N + RRS +
Sbjct: 590 QQMGSSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLL 649
Query: 449 LWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVEL-------ALRKFRIQ 508
+ +L +LP V F FS+ CD + ++L E+SE+ + L+
Sbjct: 650 INKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRN 709
Query: 509 FPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPART 568
P +R ++ L +G+ HHAG LP+ K +E LF RG++KV+F+TET A G+N PART
Sbjct: 710 LPQVLRLQSL--LHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPART 769
Query: 569 AVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL---QTPYEGAEECCKLL 628
V +L K L P E QMAGRAGRRG+DK G VV++ + P E + +++
Sbjct: 770 VVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDE--SDLRRVI 829
Query: 629 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKA-FQAWRTLEEARKLV 656
L SQF +Y M+L+LL ++ + + A F A + L E ++L+
Sbjct: 830 VGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLL 869
BLAST of CsaV3_5G025450 vs. TAIR10
Match:
AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)
HSP 1 Score: 253.1 bits (645), Expect = 8.6e-67
Identity = 169/483 (34.99%), Postives = 252/483 (52.17%), Query Frame = 0
Query: 153 ASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 212
A + F +D FQ A++ G SV+VSA TS+GKT++A A ++ +R+ YT+P+K
Sbjct: 61 AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIK 120
Query: 213 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 272
ALSNQK+R+F+E F D VGL+TGD ++ +A L+MTTEILR+M Y+ + +
Sbjct: 121 ALSNQKYRDFKEEFSD--VGLMTGDVTIDPNASCLVMTTEILRSMQYK------GSEIMR 180
Query: 273 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK-T 332
V I+ DEVHY+ D RG VWEE ++ PK + + LSATV N E A W+ ++H +
Sbjct: 181 EVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPC 240
Query: 333 ELVTSSKRPVPLTWHF--STKTSLLPLLDEKGA--RMNRKLSLNYLQLNASGDKFSKDDG 392
+V + RP PL + + L ++DEK + + SLN L DK +D+G
Sbjct: 241 HIVYTDYRPTPLQHYVFPAGGNGLYLVVDEKSKFHEDSFQKSLNALVPTNESDK-KRDNG 300
Query: 393 SRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVW 452
++ IG + ++ + K V +I + P +
Sbjct: 301 KFQKGLV----------IGKLGEESDIFK---------LVKMIIQRQYD-------PVIL 360
Query: 453 FIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRE-----SAIKGLLQG 512
F FS+K C+A + L D E+ VE D ++ + + L +G
Sbjct: 361 FSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILKRG 420
Query: 513 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTH 572
+ HH+G LP+ K IE LFQ GL+K +FATET + G+NMPA+T V ++ K +
Sbjct: 421 IGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW 480
Query: 573 LSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVL 626
LS E +QM+GRAGRRGIDK+G +L+ +L + L S F SY M+L
Sbjct: 481 LSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLL 508
BLAST of CsaV3_5G025450 vs. TAIR10
Match:
AT2G06990.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein)
HSP 1 Score: 246.9 bits (629), Expect = 6.2e-65
Identity = 181/579 (31.26%), Postives = 291/579 (50.26%), Query Frame = 0
Query: 151 ELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTP 210
++A Y F++D FQ ++V R S++VSA TS+GKT +AE A K+R+ YT+P
Sbjct: 73 DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132
Query: 211 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASG 270
LKALSNQK+RE + F D VGL+TGD ++ +A L+MTTEILR MLY+ +
Sbjct: 133 LKALSNQKYRELQHEFKD--VGLMTGDVTLSPNASCLVMTTEILRAMLYR------GSEV 192
Query: 271 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK 330
L V ++ DE+HY+ D RG VWEE +I+ P ++++ LSAT++N E A WI +H +
Sbjct: 193 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQ 252
Query: 331 -TELVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSR 390
+V + RP PL H++ P+ G + YL ++ ++F +D +
Sbjct: 253 PCHVVYTDFRPTPLQ-HYA-----FPM---GGGGL-------YLVVD-DNEQFREDSFVK 312
Query: 391 RRT--PKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVW 450
+ PK + N+ S+V +++ + + K + P +
Sbjct: 313 MQDTFPKPKSNDGKXXXXXXXXXXXXXXXXXXGD---SDVYKIVKMIMERKFE---PVII 372
Query: 451 FIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVR-----ESAIKGLLQG 510
F FSR+ C+ + + D E+ VE + R E + L +G
Sbjct: 373 FSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRG 432
Query: 511 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTH 570
+A HH+G LP+ K +E LFQ GLVK +FATET A G+NMPA+T V ++ K + +
Sbjct: 433 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 492
Query: 571 LSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVL 630
+ E +QM+GRAGRRG D++G +++ ++ PL+S F SY +L
Sbjct: 493 IGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTIL 552
Query: 631 NLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEI 690
NLL+ A+ T+E ++ SF + + ++ K+E+E
Sbjct: 553 NLLSRAEGQFTAE-----------------HVIRHSFHQFQHEKALPDIGNKVSKLEEEA 601
Query: 691 EMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEK 722
+LN E + + +F D+A +E + E +R E+
Sbjct: 613 AILNASGEAEVAEYHNLQF--DIAKHEKKLMSEIIRPER 601
BLAST of CsaV3_5G025450 vs. TAIR10
Match:
AT4G32700.2 (helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding)
HSP 1 Score: 97.4 bits (241), Expect = 6.0e-20
Identity = 121/497 (24.35%), Postives = 200/497 (40.24%), Query Frame = 0
Query: 151 ELASVYNFR-IDKF-----QRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRR 210
E+ SVYN + I K + L V L+ ++V A TS+GK+ +AE + V R +
Sbjct: 502 EVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGK 561
Query: 211 L-FYTTPLKALSNQKF-----------REFRETFGDSNVGLLTGDSAVNKDAPVLIMTTE 270
+ P ++ +K + R +G+ G L KD V + T E
Sbjct: 562 MALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLP------KDTSVAVCTIE 621
Query: 271 ILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVI---YCPKE----- 330
++ + L + +IV+DE+H + D RG + E ++ Y E
Sbjct: 622 KANSL----INRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGXXXX 681
Query: 331 ------------------VQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWH 390
+Q++ +SAT+ N +A W+ +TE RPVPL +
Sbjct: 682 XXXXXXXXXXXXXDPAHGLQIVGMSATMPNVGAVADWLQAALYQTEF-----RPVPLEEY 741
Query: 391 FSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIG 450
+++ N+K+ + + + D KD D+I
Sbjct: 742 IKVGSTI----------YNKKMEV-VRTIPKAADMGGKDP----------------DHIV 801
Query: 451 SMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSN 510
+ + N + + F SRKGC++ ++I S
Sbjct: 802 ELCNEVVQEGNSV--------------------------LIFCSSRKGCESTARHI--SK 861
Query: 511 LL---------DDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSF 570
L+ ++ E ++ A+ R + P V + L GVA HHAG +
Sbjct: 862 LIKNVPVNVDGENSEFMDIRSAIDALR-RSPSGVDPVLEETLPSGVAYHHAGLTVEEREI 921
Query: 571 IEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGR 595
+E +++GLV+V+ AT TLAAG+N+PAR + ++ GR + QM+GRAGR
Sbjct: 922 VETCYRKGLVRVLTATSTLAAGVNLPARRVIF----RQPMIGRDFIDGTRYKQMSGRAGR 923
BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match:
sp|B9DFG3|ISE2_ARATH (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISE2 PE=1 SV=2)
HSP 1 Score: 1494.9 bits (3869), Expect = 0.0e+00
Identity = 764/1067 (71.60%), Postives = 908/1067 (85.10%), Query Frame = 0
Query: 112 ELSMD-TSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQA 171
E S+D +E + EF+WQRVEKL VR+FG +ID+DEL S+Y+FRIDKFQRLA++A
Sbjct: 106 EFSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEA 165
Query: 172 FLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSN 231
FLRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD N
Sbjct: 166 FLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDN 225
Query: 232 VGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 291
VGLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISR
Sbjct: 226 VGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISR 285
Query: 292 GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTK 351
GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTS++RPVPLTW+FSTK
Sbjct: 286 GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTK 345
Query: 352 TSLLPLLDEKGARMNRKLSLNYLQLNASGDKF-SKDDGSRRRTPKRRGNEISYDNIGSMS 411
SLLPLLDEKG +NRKLSLNYLQL+AS +F DDG R+R K+RG + SY+N+ +++
Sbjct: 346 HSLLPLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT 405
Query: 412 RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 471
LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+++ LLD
Sbjct: 406 -DYPLSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLD 465
Query: 472 DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 531
DCE+SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 466 DCEKSEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKV 525
Query: 532 VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 591
VFATETLAAGINMPARTAVI+SLSK++ N R L PNEL QMAGRAGRRGID+KG+ VL+
Sbjct: 526 VFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV 585
Query: 592 QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDET-KAFQAWRTL 651
QT +EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT S E K QA R+L
Sbjct: 586 QTAFEGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSL 645
Query: 652 EEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYN 711
EEA+KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAID+KSRK LS Y
Sbjct: 646 EEAKKLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYK 705
Query: 712 EIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSI 771
EI L+EELR EK AL LL+ + +G+LPF+CL++KDSEG + S+
Sbjct: 706 EITVLKEELREEKXXXXXXXXXXXXXXXLALKPLLKGMEEGNLPFICLEFKDSEGREQSV 765
Query: 772 PTVLLGNMDS---SKLGNMFPADSS--LSGAESNLGITL--EPGAESSYYVALGSDNSWY 831
P V LG++DS SKL M D S L+ E L +P + SYYVALGSDNSWY
Sbjct: 766 PAVYLGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEPGKPNVKPSYYVALGSDNSWY 825
Query: 832 LFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSL 891
LFTEKW++TVY+TGFPN+AL+ GDALPREIM++LLDK M+W+KLA+SELGSL +EGSL
Sbjct: 826 LFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGSL 885
Query: 892 ETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKK 951
ETWSWSLNVPVL+SLS+ DE+L MS+ Y + +YK QR+K++RLKK++S++EGFREYKK
Sbjct: 886 ETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKK 945
Query: 952 ILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPL 1011
IL+ ANL +K+++LK R +RL NR++QIEPSGWK+F++ISNVIHE RALDINTH++FPL
Sbjct: 946 ILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPL 1005
Query: 1012 GETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSR 1071
GETAAAIRGENELW+AMVLRNK LV LKP +LA VCASLVSEGIKVRP R+N+YI+EPS
Sbjct: 1006 GETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSD 1065
Query: 1072 TVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEG 1131
TV++M+NFLE+QR+SL LQEKH V I CCLD QFSGMVEAWASGL+W+E+MM+CAMDEG
Sbjct: 1066 TVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDEG 1125
Query: 1132 DLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
DLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+RPPISELAG
Sbjct: 1126 DLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171
BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match:
sp|Q9ZBD8|HELY_MYCLE (Probable helicase HelY OS=Mycobacterium leprae (strain TN) OX=272631 GN=helY PE=3 SV=1)
HSP 1 Score: 321.6 bits (823), Expect = 3.5e-86
Identity = 206/524 (39.31%), Postives = 281/524 (53.63%), Query Frame = 0
Query: 158 FRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQ 217
F +D FQ+ A A RG V+V APT +GKT++ E A +A + FYTTPLKALSNQ
Sbjct: 16 FSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGGKCFYTTPLKALSNQ 75
Query: 218 KFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVI 277
K+ + +G + +GLLTGD +VN D+PV++MTTE+LRNMLY + + GL HV
Sbjct: 76 KYTDLTARYGRNRIGLLTGDQSVNGDSPVVVMTTEVLRNMLYAD---SFALQGLSHV--- 135
Query: 278 VLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSS 337
V+DEVH+++D RG VWEE++++ P +V+++ LSATV+N +E GW+ + G T +V
Sbjct: 136 VMDEVHFIADRMRGPVWEEVILHLPDDVRMVSLSATVSNAEEFGGWVQTVRGDTTVVVDE 195
Query: 338 KRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRG 397
RPVPL H L L D ++ N L+ A + D S R P+RR
Sbjct: 196 HRPVPLWQHVLVGKRLFDLFDYDSNVDQSPVNPNLLRHIAHCRE--ADRMSDWRNPRRRA 255
Query: 398 NEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDA 457
R + + S+ R V ++D ++ +LPA+ F+FSR GCDA
Sbjct: 256 -----------GRGSGVRPRFYRSLARPEVIAILD------AEGLLPAITFVFSRFGCDA 315
Query: 458 AVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV---------RESAI-------KGLLQ 517
AVQ C RS + L + R Q + + + A+ +GLL+
Sbjct: 316 AVQ---------QCLRSPLRLTSEEERAQIAEVIDHRCGDLADADLAVLGYYEWREGLLR 375
Query: 518 GVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRT 577
G+AAHHAG LP ++ +EELF GLVK VFATETLA GINMPART V+ L K +
Sbjct: 376 GLAAHHAGMLPAFRHAVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGKQHV 435
Query: 578 HLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYE---GAEECCKLLFAGIEPLVSQFTASY 637
L+P E Q+ GRAGRRGID +GH V++ P E G L A PL S F SY
Sbjct: 436 PLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPSEDTSGPSAVAGLASARTFPLRSSFVPSY 487
Query: 638 GMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
M +NL+ W + E A L+EQSF Y
Sbjct: 496 NMTINLV------------------HWMSPERAHALLEQSFAQY 487
BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match:
sp|P9WMR0|HELY_MYCTO (Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=helY PE=3 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 1.4e-82
Identity = 203/539 (37.66%), Postives = 281/539 (52.13%), Query Frame = 0
Query: 146 IIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 205
+ ++D + F +D FQ+ A A RG V+V APT +GKT++ E A +A +
Sbjct: 4 LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63
Query: 206 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 265
FYTTPLKALSNQK + +G +GLLTGD +VN +APV++MTTE+LRNMLY
Sbjct: 64 FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123
Query: 266 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 325
+ L + +V+DEVH+L+D RG VWEE+++ P +V+++ LSATV+N +E GWI
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183
Query: 326 QIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLD------EKGARMNRKLSLNYLQLNASG 385
+ G T +V RPVPL H + L D E ++NR+L L ++
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNREL-LRHIAHRREA 243
Query: 386 DKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKS 445
D+ + D RRR R G R P+VI +L +
Sbjct: 244 DRMA-DWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDA 303
Query: 446 KDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV-------- 505
+ +LPA+ F+FSR GCDAAV C RS + L + R + + +
Sbjct: 304 EGLLPAITFVFSRAGCDAAV---------TQCLRSPLRLTSEEERARIAEVIDHRCGDLA 363
Query: 506 -RESAI-------KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP 565
+ A+ +GLL+G+AAHHAG LP ++ +EELF GLVK VFATETLA GINMP
Sbjct: 364 DSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMP 423
Query: 566 ARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLL 625
ART V+ L K + L+P E Q+ GRAGRRGID +GH V++ P E L
Sbjct: 424 ARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLA 481
Query: 626 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
PL S F SY M +NL+ M ++A +L+EQSF Y
Sbjct: 484 STRTFPLRSSFAPSYNMTINLV--------HRMGP----------QQAHRLLEQSFAQY 481
BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match:
sp|P9WMR1|HELY_MYCTU (Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=helY PE=1 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 1.4e-82
Identity = 203/539 (37.66%), Postives = 281/539 (52.13%), Query Frame = 0
Query: 146 IIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 205
+ ++D + F +D FQ+ A A RG V+V APT +GKT++ E A +A +
Sbjct: 4 LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63
Query: 206 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 265
FYTTPLKALSNQK + +G +GLLTGD +VN +APV++MTTE+LRNMLY
Sbjct: 64 FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123
Query: 266 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 325
+ L + +V+DEVH+L+D RG VWEE+++ P +V+++ LSATV+N +E GWI
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183
Query: 326 QIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLD------EKGARMNRKLSLNYLQLNASG 385
+ G T +V RPVPL H + L D E ++NR+L L ++
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNREL-LRHIAHRREA 243
Query: 386 DKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKS 445
D+ + D RRR R G R P+VI +L +
Sbjct: 244 DRMA-DWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDA 303
Query: 446 KDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAV-------- 505
+ +LPA+ F+FSR GCDAAV C RS + L + R + + +
Sbjct: 304 EGLLPAITFVFSRAGCDAAV---------TQCLRSPLRLTSEEERARIAEVIDHRCGDLA 363
Query: 506 -RESAI-------KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP 565
+ A+ +GLL+G+AAHHAG LP ++ +EELF GLVK VFATETLA GINMP
Sbjct: 364 DSDLAVLGYYEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMP 423
Query: 566 ARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLL 625
ART V+ L K + L+P E Q+ GRAGRRGID +GH V++ P E L
Sbjct: 424 ARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLA 481
Query: 626 FAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFGNY 663
PL S F SY M +NL+ M ++A +L+EQSF Y
Sbjct: 484 STRTFPLRSSFAPSYNMTINLV--------HRMGP----------QQAHRLLEQSFAQY 481
BLAST of CsaV3_5G025450 vs. Swiss-Prot
Match:
sp|P35207|SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKI2 PE=1 SV=2)
HSP 1 Score: 294.7 bits (753), Expect = 4.6e-78
Identity = 202/617 (32.74%), Postives = 310/617 (50.24%), Query Frame = 0
Query: 128 KWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGK 187
+W V L ++ F E I A + F +D FQ+ AV +G SV V+A TS+GK
Sbjct: 301 EWAHVVDLNHKIENFDELI---PNPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGK 360
Query: 188 TLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVL 247
T++AE A + YT+P+KALSNQKFR+F+ETF D N+GL+TGD +N DA L
Sbjct: 361 TVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCL 420
Query: 248 IMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQL 307
IMTTEILR+MLY+ + + V+ ++ DEVHY++D RG VWEE++I P+ V+
Sbjct: 421 IMTTEILRSMLYRGADL------IRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVKF 480
Query: 308 ICLSATVANPDELAGWIGQIHGKTELVTSS-KRPVPLTWHFSTKTSLLPLLDEKGARMNR 367
I LSATV N E A WIG+ K V S+ KRPVPL + K L+P++++ +
Sbjct: 481 ILLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFLEA 540
Query: 368 KLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDI------- 427
+ LN K G+ +T RG
Sbjct: 541 NFRKHKEILNGESAK-----GAPSKTDNGRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
Query: 428 --------------------NSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAV 487
+ + P++++ L+ +++LP V F+FS+K C+
Sbjct: 601 XXXXXXXXXXXXNKRKFFTQDGPSKKTWPEIVN---YLRKRELLPMVVFVFSKKRCEEYA 660
Query: 488 QYIDSSNLLDDCERSEVELALRK--FRIQFPDAVRESAIKG---LLQGVAAHHAGCLPLW 547
+++ N ++ E+S++ + + K R++ D +K L +G+A HH G LP+
Sbjct: 661 DWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQILKTRSLLERGIAVHHGGLLPIV 720
Query: 548 KSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGR 607
K IE LF +G +KV+FATET A G+N+P RT + +S+ K NG L+P E QMAGR
Sbjct: 721 KELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGR 780
Query: 608 AGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEP-LVSQFTASYGMVLNLLAGAKVTHT 667
AGRRG+D G V+++ + K + G+ L SQF +Y M+LNLL
Sbjct: 781 AGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLL-------- 840
Query: 668 SEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEA 710
+A R E +++ SF + ++++ +++E++ + + + E
Sbjct: 841 -------RIEALRVEE----MIKYSFSENAKETLQPEHEKQIKVLQEELQTIEYK-SCEI 880
BLAST of CsaV3_5G025450 vs. TrEMBL
Match:
tr|A0A0A0KNK4|A0A0A0KNK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G484640 PE=4 SV=1)
HSP 1 Score: 2245.3 bits (5817), Expect = 0.0e+00
Identity = 1168/1168 (100.00%), Postives = 1168/1168 (100.00%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH
Sbjct: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFH 60
Query: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI
Sbjct: 61 SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSMDTSEI 120
Query: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS
Sbjct: 121 SNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVS 180
Query: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV
Sbjct: 181 APTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAV 240
Query: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY
Sbjct: 241 NKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIY 300
Query: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK
Sbjct: 301 CPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEK 360
Query: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN
Sbjct: 361 GARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDIN 420
Query: 421 SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL
Sbjct: 421 SIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELAL 480
Query: 481 RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI
Sbjct: 481 RKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 540
Query: 541 NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC
Sbjct: 541 NMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECC 600
Query: 601 KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG
Sbjct: 601 KLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLVEQSFG 660
Query: 661 NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE
Sbjct: 661 NYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLE 720
Query: 721 KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK
Sbjct: 721 KRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDSSK 780
Query: 781 LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA
Sbjct: 781 LGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVA 840
Query: 841 LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND
Sbjct: 841 LSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSEND 900
Query: 901 ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY
Sbjct: 901 ELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRY 960
Query: 961 KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL
Sbjct: 961 KRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVL 1020
Query: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL
Sbjct: 1021 RNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDL 1080
Query: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL
Sbjct: 1081 QEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKL 1140
Query: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1169
PDIDPSLQRNASTASDVMNRPPISELAG
Sbjct: 1141 PDIDPSLQRNASTASDVMNRPPISELAG 1168
BLAST of CsaV3_5G025450 vs. TrEMBL
Match:
tr|A0A1S3CQZ5|A0A1S3CQZ5_CUCME (LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503332 PE=4 SV=1)
HSP 1 Score: 2161.7 bits (5600), Expect = 0.0e+00
Identity = 1130/1173 (96.33%), Postives = 1147/1173 (97.78%), Query Frame = 0
Query: 1 MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60
MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS ASRFC HKPLAFYST PV F
Sbjct: 1 MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
Query: 61 RPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGGFEQSYDEVELSM 120
RPSF SPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61 RPSFQSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAAEEYDSDALGEFEQSYDEVELSM 120
Query: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180
D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLP 360
Query: 361 LLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMSRQATLS 420
LLDEKG RMNRKLSLNYLQL+ASG K KDDGS RRTPKRRGNEISYDNIGSMSRQATLS
Sbjct: 361 LLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGS-RRTPKRRGNEISYDNIGSMSRQATLS 420
Query: 421 KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSE 480
KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQY+DSSNLLDDCERSE
Sbjct: 421 KNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYVDSSNLLDDCERSE 480
Query: 481 VELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
VELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
Sbjct: 481 VELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET 540
Query: 541 LAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEG 600
LAAGINMPARTAVIASLSKRSNNGRT LS NELLQMAGRAGRRGID KGHVVLLQTPYEG
Sbjct: 541 LAAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDXKGHVVLLQTPYEG 600
Query: 601 AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLEEARKLV 660
AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETK FQAWRTLEEARKLV
Sbjct: 601 AEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLEEARKLV 660
Query: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQE 720
EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSD+AYNEIAELQE
Sbjct: 661 EQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNEIAELQE 720
Query: 721 ELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
ELR EKRHRTELRKEMESQRI ALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN
Sbjct: 721 ELRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN 780
Query: 781 MDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
MDSSKLGNMFPAD+SLSGAESNL ITLEPG+ESSYYVALGSDNSWYLFTEKWIKTVYKTG
Sbjct: 781 MDSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIKTVYKTG 840
Query: 841 FPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
FPNVAL+KGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS
Sbjct: 841 FPNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNS 900
Query: 901 LSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQ 960
LSENDELLQMSQSYMESL+RYKVQRNKVARLKKRIS+TEGFREYKKILDMANL+EDKIRQ
Sbjct: 901 LSENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLVEDKIRQ 960
Query: 961 LKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
LKTRYKRLSNRI+QIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW
Sbjct: 961 LKTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELW 1020
Query: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN
Sbjct: 1021 IAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRN 1080
Query: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1140
SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRRTIDLLA
Sbjct: 1081 SLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRRTIDLLA 1140
Query: 1141 QIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
QIPKLPD+DPSLQ NASTASDVMNRPPISELAG
Sbjct: 1141 QIPKLPDVDPSLQSNASTASDVMNRPPISELAG 1172
BLAST of CsaV3_5G025450 vs. TrEMBL
Match:
tr|M5Y8A0|M5Y8A0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G262200 PE=4 SV=1)
HSP 1 Score: 1658.7 bits (4294), Expect = 0.0e+00
Identity = 883/1163 (75.92%), Postives = 989/1163 (85.04%), Query Frame = 0
Query: 23 SYPFPSFLTPHYSASRFCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSDVXXXXXXX 82
SYP LT FC K YS + FR +F SP S F KSQLSD XXXXXXX
Sbjct: 23 SYPLLHHLTQTTHVLGFCSPKSPPTYSPSSLRFRVTFQSPSSAFPAKSQLSDAXXXXXXX 82
Query: 83 XXXXXXXXXAAEEYDSDAL------GGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLL 142
XXXXXXXXX D + G EQS DE++ SM +E S +EFKWQRVEKL
Sbjct: 83 XXXXXXXXXXXXXXXXDDVPGDIMSDGLEQSDDEIDTSMAAAEPSTRPEEFKWQRVEKLC 142
Query: 143 GEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAV 202
EV+ FGE +ID +ELAS+Y+FRIDKFQRLA+QAFLRGSSVVVSAPTSSGKTLIAEAAAV
Sbjct: 143 SEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAV 202
Query: 203 ATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRN 262
ATVAR RLFYTTPLKALSNQKFREFRETFGD NVGLLTGDSAVNKDA VLIMTTEILRN
Sbjct: 203 ATVARGMRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAVNKDAQVLIMTTEILRN 262
Query: 263 MLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVAN 322
MLYQSVGMA+S GLFHVDVIVLDEVHYLSD+ RGTVWEEIVIYCPK+VQLICLSATVAN
Sbjct: 263 MLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVWEEIVIYCPKKVQLICLSATVAN 322
Query: 323 PDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLN 382
PDELAGWIGQIHGKTELVTSS+RPVPLTWHFSTKTSLLPLLD+ G MNR+LS+NYLQLN
Sbjct: 323 PDELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKTSLLPLLDKTGKHMNRRLSVNYLQLN 382
Query: 383 ASGDKFSKDDGSRRRTPKRRGNEISY-DNIGSMSRQATLSKNDINSIRRSNVPQVIDTLW 442
ASG K KDDGSRRR+ +RR +E+SY D+ G+MSR+ LSKNDIN I RS VPQ+ DTLW
Sbjct: 383 ASGTKSYKDDGSRRRSSRRRASEMSYDDSTGNMSRR-PLSKNDINLIHRSQVPQITDTLW 442
Query: 443 QLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESA 502
LKS+DMLPA+WFIFSRKGCDAAVQY+ +NLLDDCE SEV+LAL++FRI++PDA+RE+A
Sbjct: 443 HLKSRDMLPAIWFIFSRKGCDAAVQYVQDNNLLDDCEMSEVQLALKRFRIKYPDAIRETA 502
Query: 503 IKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKR 562
+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTA+IASLSKR
Sbjct: 503 VKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAIIASLSKR 562
Query: 563 SNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFT 622
S++GRT LSPNEL QMAGRAGRRGID++GHVVL+Q+PYEGAE CCK++FAG+EPLVSQFT
Sbjct: 563 SDSGRTQLSPNELFQMAGRAGRRGIDERGHVVLVQSPYEGAEACCKIVFAGLEPLVSQFT 622
Query: 623 ASYGMVLNLLAGAKVT-HTSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEE 682
ASYGMVLNLLAGAK T ++E D+T+A Q+ RTLEEARKLVEQSFGNYVGSNVMLAAKEE
Sbjct: 623 ASYGMVLNLLAGAKFTSRSNESDDTEASQSGRTLEEARKLVEQSFGNYVGSNVMLAAKEE 682
Query: 683 LVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQ 742
L +I+KEIE+L LEI+D+AIDRKSRK LS AY EIA+LQEELR EKR RTELR+ MESQ
Sbjct: 683 LTRIQKEIEILTLEISDDAIDRKSRKLLSGPAYKEIADLQEELRAEKRLRTELRRRMESQ 742
Query: 743 RICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADSSL 802
++ +L +L DGHLPFLCLQYKDSEGVQHSIP V LG +DS SKL +M AD +
Sbjct: 743 KLSSLRPMLEEFEDGHLPFLCLQYKDSEGVQHSIPAVYLGKVDSFSRSKLKHMVSADDAF 802
Query: 803 ------SGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGD 862
S ESNL E SYYVALGSDNSWYLFTEKWIKT+YKTGFPNVAL+ GD
Sbjct: 803 ALNAVTSEFESNLVF------EPSYYVALGSDNSWYLFTEKWIKTIYKTGFPNVALALGD 862
Query: 863 ALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQM 922
ALPREIM LLDK +KWEKLA+SELG MEGSLETWSWSLNVPVLNSLSE+DELL
Sbjct: 863 ALPREIMSMLLDKTELKWEKLAESELGGFWNMEGSLETWSWSLNVPVLNSLSEHDELLHK 922
Query: 923 SQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSN 982
S++Y +++RYK QRNKV+RLKK+IS+T+GFREYKKI+DMA E+KI++LK R +RL+N
Sbjct: 923 SEAYHNAVERYKDQRNKVSRLKKKISRTQGFREYKKIVDMAKFTEEKIKRLKGRSRRLTN 982
Query: 983 RIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFL 1042
RI+QIEPSGWKEFLQISNVIHE RALDINTHVMFPLG TAAAIRGENELW+AMVLRNK L
Sbjct: 983 RIEQIEPSGWKEFLQISNVIHETRALDINTHVMFPLGVTAAAIRGENELWLAMVLRNKIL 1042
Query: 1043 VQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHG 1102
+ LKP ELAAVCASLVSEGIK+RP +NNSYI+EPS TV++++NFL+EQR+S LQEKHG
Sbjct: 1043 IDLKPPELAAVCASLVSEGIKIRPWKNNSYIYEPSSTVVDVVNFLDEQRSSFLQLQEKHG 1102
Query: 1103 VNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDP 1162
VN C LD+QFSGMVEAW SGLTW+EIMMDCAMDEGDLARLLRRTIDLL QIPKLPDIDP
Sbjct: 1103 VNKPCYLDTQFSGMVEAWVSGLTWKEIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDIDP 1162
Query: 1163 SLQRNASTASDVMNRPPISELAG 1169
LQ NA TAS++M+RPPISELAG
Sbjct: 1163 LLQSNAKTASNIMDRPPISELAG 1178
BLAST of CsaV3_5G025450 vs. TrEMBL
Match:
tr|A0A2P5BYB1|A0A2P5BYB1_9ROSA (DEAD-box ATP-dependent RNA helicase ISE OS=Trema orientalis OX=63057 GN=TorRG33x02_304350 PE=4 SV=1)
HSP 1 Score: 1640.6 bits (4247), Expect = 0.0e+00
Identity = 872/1139 (76.56%), Postives = 975/1139 (85.60%), Query Frame = 0
Query: 39 FCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSD---VXXXXXXXXXXXXXXXXAAEE 98
FC K L S R FR SF S S FS + QLSD XXXXXXXXXXXXXXXX
Sbjct: 40 FCTPKSLPPNSLR---FRASFKSRSSTFSAQPQLSDXXXXXXXXXXXXXXXXXXXXXXXX 99
Query: 99 YDSDALGGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASV 158
D G +QS DE+E S +E ++EFKWQRVEK EVREFG IIDVDELASV
Sbjct: 100 XSGDFSEGLDQSDDEIEFS---AEAPARTEEFKWQRVEKFRNEVREFGNEIIDVDELASV 159
Query: 159 YNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALS 218
Y+FRIDKFQRLA++AFL+GSSVVVSAPTSSGKTLIAEAAA+AT+AR RRLFYTTPLKALS
Sbjct: 160 YDFRIDKFQRLAIKAFLKGSSVVVSAPTSSGKTLIAEAAAIATIARGRRLFYTTPLKALS 219
Query: 219 NQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVD 278
NQKFREFRETF DS+VGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGM +S LFHVD
Sbjct: 220 NQKFREFRETFKDSDVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMVSSGHSLFHVD 279
Query: 279 VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVT 338
VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVT
Sbjct: 280 VIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTELVT 339
Query: 339 SSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKR 398
SSKRPVPLTWHFSTKTSLLPLLDE G +MNRKLSLNYLQLNASG + S+DD SRR+ ++
Sbjct: 340 SSKRPVPLTWHFSTKTSLLPLLDETGTKMNRKLSLNYLQLNASGMRSSRDD-SRRKNSRK 399
Query: 399 RGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGC 458
R NE++YD G+ SKNDI+++RRS VPQ+ DTLWQLK++DMLPAVWFIFSRKGC
Sbjct: 400 RANEMTYDYDGTRCNGQPFSKNDISAMRRSQVPQIADTLWQLKARDMLPAVWFIFSRKGC 459
Query: 459 DAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWK 518
DAAVQY++ NLLD+CE SEVELAL++FR+Q+PDAVR++A+KGL QGVAAHHAGCLPLWK
Sbjct: 460 DAAVQYLEDHNLLDECEMSEVELALKRFRVQYPDAVRQTAVKGLRQGVAAHHAGCLPLWK 519
Query: 519 SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRA 578
SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRS++GR HLSPNELLQMAGRA
Sbjct: 520 SFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSDSGRIHLSPNELLQMAGRA 579
Query: 579 GRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSE 638
GRRGID +GHVVL+QTPYEGAEEC K+LFAG+EPLVSQFTASYGMVLNLLAGAKVT S
Sbjct: 580 GRRGIDDRGHVVLVQTPYEGAEECTKVLFAGLEPLVSQFTASYGMVLNLLAGAKVTRRSN 639
Query: 639 MDE-TKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAI 698
+ E KAFQA RTLEEARKLVEQSFGNYV SNVMLAA+EEL KI+KEIEML E++DEAI
Sbjct: 640 VSEDAKAFQAGRTLEEARKLVEQSFGNYVSSNVMLAAREELTKIKKEIEMLTSELSDEAI 699
Query: 699 DRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFL 758
DRKSRK LS+ AY EI +LQEELR +KR RTELR++MESQ+I +L LL +G LPFL
Sbjct: 700 DRKSRKLLSEAAYKEITDLQEELRAQKRLRTELRRKMESQKILSLKPLLEEFENGQLPFL 759
Query: 759 CLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADS--SLSGAESNLGITLEPGAESS 818
CLQYKD EGVQH++P V LG +DS SKL M + SL+ E EP E S
Sbjct: 760 CLQYKDPEGVQHAVPAVYLGKVDSLEGSKLKKMVTDEDAFSLNDREKESDSDAEPSLEPS 819
Query: 819 YYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADS 878
YYVALGSDNSWY+FTEKWIKTVYKTGFPNVAL++GD LPREIMR LLDKE MKW+KL+DS
Sbjct: 820 YYVALGSDNSWYIFTEKWIKTVYKTGFPNVALAQGDPLPREIMRMLLDKEDMKWDKLSDS 879
Query: 879 ELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKR 938
E G + CMEGSLETWSWSLNVPVLNSLSENDELL S++Y +++RYK QR KVARLKK+
Sbjct: 880 EFGGVWCMEGSLETWSWSLNVPVLNSLSENDELLHTSEAYHGAVERYKQQRTKVARLKKK 939
Query: 939 ISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIR 998
IS+TEGF+EYKK++DM L E+KI++LK R +RL+NRI+QIEPSGWKEFLQISNVIHE R
Sbjct: 940 ISRTEGFKEYKKVIDMTKLTEEKIKRLKARSRRLTNRIEQIEPSGWKEFLQISNVIHENR 999
Query: 999 ALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRP 1058
ALDINTHV+FPLGETAAAIRGENELW+AMVLRNK L +LKP +LAAV ASLVSEGIKVRP
Sbjct: 1000 ALDINTHVIFPLGETAAAIRGENELWLAMVLRNKVLTELKPAQLAAVLASLVSEGIKVRP 1059
Query: 1059 GRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTW 1118
+NNSYI+EP+ V+N+I+FL EQR+SL LQEKHGV+I CCLDSQF+GMVEAWASGLTW
Sbjct: 1060 WKNNSYIYEPTPVVLNVISFLNEQRSSLIQLQEKHGVSIVCCLDSQFAGMVEAWASGLTW 1119
Query: 1119 REIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1169
RE+MMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP LQ NA AS+VM+RPPISELAG
Sbjct: 1120 REMMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLQSNARAASEVMDRPPISELAG 1171
BLAST of CsaV3_5G025450 vs. TrEMBL
Match:
tr|A0A2P5BCN2|A0A2P5BCN2_PARAD (DEAD-box ATP-dependent RNA helicase ISE OS=Parasponia andersonii OX=3476 GN=PanWU01x14_250740 PE=4 SV=1)
HSP 1 Score: 1622.4 bits (4200), Expect = 0.0e+00
Identity = 863/1142 (75.57%), Postives = 969/1142 (84.85%), Query Frame = 0
Query: 39 FCPHKPLAFYSTRPVPFRPSFHSPRSIFSEKSQLSDVXXXXXXXXXXXXXXXXAA----- 98
FC K L S R FR SF S S F+ + QL XXXXXXXXXXXXXXXX
Sbjct: 40 FCTPKSLPPNSLR---FRASFKSRSSTFTAQPQLXXXXXXXXXXXXXXXXXXXXXXXXXX 99
Query: 99 -EEYDSDALGGFEQSYDEVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDEL 158
++ D G +QS DE+E S +E +++FKWQRVEK EVREFG IIDVDEL
Sbjct: 100 YDDVSGDFSEGLDQSDDEIEFS---AEAPARTEQFKWQRVEKFRNEVREFGNEIIDVDEL 159
Query: 159 ASVYNFRIDKFQRLAVQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 218
ASVY+FRIDKFQRLA++AFL+GSSVVVSAPTSSGKTLIAEAAA+AT+AR RRLFYTTPLK
Sbjct: 160 ASVYDFRIDKFQRLAIKAFLKGSSVVVSAPTSSGKTLIAEAAAIATIARGRRLFYTTPLK 219
Query: 219 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 278
ALSNQKFREFRETF DS+VGLLTGDSAVNKDA V+IMTTEILRNMLYQSVGM +S LF
Sbjct: 220 ALSNQKFREFRETFQDSDVGLLTGDSAVNKDAQVVIMTTEILRNMLYQSVGMVSSGHSLF 279
Query: 279 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTE 338
HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTE
Sbjct: 280 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTE 339
Query: 339 LVTSSKRPVPLTWHFSTKTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRT 398
LVTSSKRPVPLTWHFSTKTSLLPLLDE G +MNRKLSLNYLQLNASG + S+DD SRR+
Sbjct: 340 LVTSSKRPVPLTWHFSTKTSLLPLLDETGTKMNRKLSLNYLQLNASGIRSSRDD-SRRKN 399
Query: 399 PKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSR 458
++R NE++YD + S LSKNDI++IRRS VPQ+ DTLWQLK++DMLPAVWFIFSR
Sbjct: 400 SRKRANEMTYDYDATRSNGQPLSKNDISAIRRSQVPQIADTLWQLKARDMLPAVWFIFSR 459
Query: 459 KGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLP 518
KGCDAAVQY++ NLLD+CE SEVELAL++FR+Q+PDAVR+ A+KGL QGVAAHHAGCLP
Sbjct: 460 KGCDAAVQYLEDHNLLDECEMSEVELALKRFRVQYPDAVRQIAVKGLRQGVAAHHAGCLP 519
Query: 519 LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMA 578
LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASL KRS++GR HLSPNELLQMA
Sbjct: 520 LWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLGKRSDSGRIHLSPNELLQMA 579
Query: 579 GRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTH 638
GRAGRRGID GHVVL+QTPYEGAEEC K+LFAG+EPLVSQFTASYGMVLNLLAGAKVT
Sbjct: 580 GRAGRRGIDDNGHVVLVQTPYEGAEECTKVLFAGLEPLVSQFTASYGMVLNLLAGAKVTR 639
Query: 639 TSEMDE-TKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITD 698
S + E KAFQA RTLEEARKLVEQSFGNYV SNVMLAA+EEL KI+KEIEML E++D
Sbjct: 640 RSNVSEDAKAFQAGRTLEEARKLVEQSFGNYVSSNVMLAAREELTKIKKEIEMLTSELSD 699
Query: 699 EAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHL 758
EAIDRKSRK LS+ AY EI +LQEELR +KR RTELR++MESQ+I +L LL +G L
Sbjct: 700 EAIDRKSRKLLSEAAYKEITDLQEELRAQKRLRTELRRKMESQKIISLKPLLEEFENGQL 759
Query: 759 PFLCLQYKDSEGVQHSIPTVLLGNMDS---SKLGNMFPADS--SLSGAESNLGITLEPGA 818
PFLCLQYKD EGVQH++P V L +DS SKL M + SL+ E EP
Sbjct: 760 PFLCLQYKDPEGVQHAVPAVYLRKVDSLEGSKLKKMVTDEDAFSLNDTEKESDSDAEPSL 819
Query: 819 ESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKL 878
E SYYVALGSDNSWY+FTEKWIKTVYKTGFPNVAL++GD LPREIMR LLDKE MKW+KL
Sbjct: 820 EPSYYVALGSDNSWYIFTEKWIKTVYKTGFPNVALAQGDPLPREIMRMLLDKEDMKWDKL 879
Query: 879 ADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARL 938
+DSE G + CMEGSLETWSWSLNVPVLNSLSE+DELL S++Y +++RYK QR KVARL
Sbjct: 880 SDSEFGGVWCMEGSLETWSWSLNVPVLNSLSESDELLHTSEAYHGAVERYKQQRTKVARL 939
Query: 939 KKRISKTEGFREYKKILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIH 998
KK+IS+TEGF+EYKK++DM L E+K+++LK R +RL+NRI+QIEPSGWKEFLQISNVIH
Sbjct: 940 KKKISRTEGFKEYKKVIDMTKLTEEKMKRLKARSRRLTNRIEQIEPSGWKEFLQISNVIH 999
Query: 999 EIRALDINTHVMFPLGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIK 1058
E RALDINTHV+FPLGETAAAIRGENELW+AM LRNK L +LKP +LAAV ASLVSEGIK
Sbjct: 1000 ESRALDINTHVIFPLGETAAAIRGENELWLAMALRNKVLTELKPAQLAAVLASLVSEGIK 1059
Query: 1059 VRPGRNNSYIFEPSRTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASG 1118
VRP +NNSYI+EP+ V+N+I+FL QR+SL LQEKHGVNI CLDSQF+GMVEAWASG
Sbjct: 1060 VRPWKNNSYIYEPTSVVLNVISFLNGQRSSLVQLQEKHGVNIDSCLDSQFAGMVEAWASG 1119
Query: 1119 LTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISEL 1169
LTWRE+MMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP LQ NA AS+VM+RPPISEL
Sbjct: 1120 LTWREMMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLQSNARAASEVMDRPPISEL 1174
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011655295.1 | 0.0e+00 | 100.00 | PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [C... | [more] |
XP_011655294.1 | 0.0e+00 | 99.24 | PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [C... | [more] |
XP_008465717.2 | 0.0e+00 | 96.33 | PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH15 chlor... | [more] |
XP_022150310.1 | 0.0e+00 | 89.60 | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Momordica charantia] | [more] |
XP_022946499.1 | 0.0e+00 | 88.74 | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT1G70070.1 | 0.0e+00 | 71.60 | DEAD/DEAH box helicase, putative | [more] |
AT3G46960.1 | 2.0e-71 | 34.33 | RNA helicase, ATP-dependent, SK12/DOB1 protein | [more] |
AT1G59760.1 | 8.6e-67 | 34.99 | RNA helicase, ATP-dependent, SK12/DOB1 protein | [more] |
AT2G06990.1 | 6.2e-65 | 31.26 | RNA helicase, ATP-dependent, SK12/DOB1 protein | [more] |
AT4G32700.2 | 6.0e-20 | 24.35 | helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed ... | [more] |
Match Name | E-value | Identity | Description | |
sp|B9DFG3|ISE2_ARATH | 0.0e+00 | 71.60 | DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana... | [more] |
sp|Q9ZBD8|HELY_MYCLE | 3.5e-86 | 39.31 | Probable helicase HelY OS=Mycobacterium leprae (strain TN) OX=272631 GN=helY PE=... | [more] |
sp|P9WMR0|HELY_MYCTO | 1.4e-82 | 37.66 | Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)... | [more] |
sp|P9WMR1|HELY_MYCTU | 1.4e-82 | 37.66 | Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)... | [more] |
sp|P35207|SKI2_YEAST | 4.6e-78 | 32.74 | Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... | [more] |