Cp4.1LG11g07540 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG11g07540
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHelicase, putative
LocationCp4.1LG11 : 5655922 .. 5665280 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAAGAAAAGAAAATCTAGTTATCCAAAGAGAGTAGCCGAGCCTAAGTTCGGCGTCATGCCCTCTCCCGCCATTAACGTTTTCTCCATCATTTCTCCCCAACATCTCTGGCCGCCATTATCTTATCCTTTCCCCTCCTCTCTATGTCCTCGTTGTTCTTCACCTCCGATTCAGGCCACGAGGTTTTGTCGCCTTAAACCTCTCCCCATCTTCTCTCCCTTTCCAGTTCCATTTCGACCTTCCGTCCGCTCTCCGAGGTCCATTTTCTCTGAAAAACCTCAACTCTCCGATGTCGACGAAGACGAGGATGAGGATGAGGATGAAGATGAAGATGAAGATGACGACGACGACGACGACGTGGCAGCCGAGGAGTACGATATCGATGCGTTTGGAGAATTGGAGCAGAGGTACGATGAAGTGGAATTGTCGATGGAAGCTACTGAAATCTCCATTGCACCTGAGGAGTTCAAATCGCAGAGAGTCGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTGTCGATGTTGATGAACTCGCTTCAGTTTATAATTTCCGTATCGACAAGTTTCAGGTAAATCTTTACATTTATTTGTAATTTGGTGAATGTTGTGACATGTTTATCAATTTGCGTCAACTCTACAGACTGTACATTTGAAATTTTTATCATTTTTCGTTAGCGACAAGCCATAGAAGCATTCTTGAGAGGATCGTCGGTGGTGGTATCGGCGCCTACCAGCAGTGGCAAGACTTTGATTGCGGAGGCGGCGGCTGTTGCTACTGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAGTTTCGGGAGTTCCGGTAAACAATTTCAACATTTTTGCTACTTATTGCAGTTCTTACATCGCTTACTTTTTGTTAAATCAATATCCTTCTATTGTTTCAGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTTACGGGAGATTCTGCAGTTAATAAAGATGCCCTGGTTTTGATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGGTAAGATGTCAACGTACTTAGTTACGATCGCATTTTATGCACGAAATCGTCAATGAGCTCCAATCAGTTGGAAAAACCTAGCATGGGGTTCCGTCTAAGCAGCCATTTTATCAACGATTTTTTTTCTTGATTCGTCTTCTTTTAAAATCGCATGAGATACACTTTACAGAATTTTATTTTTCATGTCAAGTAGTAAACCAGCTTGTACAAAATAGGGGGAAAAATTAGCCTGAAAAAAGCAGCCCACCACAGCAAAACCAAAGCATTTACTGGAGGTGACTCCAATTATTAACAACAAAAGAATATAACAGGCAACTTTTGTAGGGAACATCCAAAGAGGCTTTGAAGTGAGCCATGCTCTAAATCTCCTTTTTAGACCCTTTGTGCCATGAAGGCTCTCCTATTTTTCTCTAATATAATGTTCCAGCTAATGTCATATACCAGTATCAGGGAAGTTCTCTATCACTTAAGGAGGGAGAACTTGTTGAGGATTGTTGGGATGAAGTCCCACATTGGCTAATTTAGGGAATGATCATAGGTTTTAAGCAAGGAATAGTATCTTCATTGGTATGAGACCTTCTGAGGAAGCCCAAAGCAAAGTCATGAGAGCTGATGCTCAAAGTGGACAATATCATACCATTGTAGAGATTCGTAGTTCCTAACAGAACTCCCCTCAATCGTGTCCAACAATCTCCGCTCAACAAAAGTCTCACGAAATCCTCCTAAAAATCTTCACTGGAAATTGGCATCTTCAATGATTTAAAAATTGTTCAGATCCTATTAAGGTACACTAAGGAGTCTTGTTTTCTAGAATATAAGAAAATAGTCCCTTCTCACAACGAACCCTTCTACAAAGTCTGTACCCGTGCTTCTAAAAAAAAGTCTACAAAGAACGACTACCTCCACTACAAAAATGAAAAGGAGACAAAGGAATTTCGTGCTTGATCCCTTTAGTAGCCAGAATCTTGCCACTAGGCTTAGTATATTTACCACAATGGAATTTTTTATGACACTGTTACAAATTTGTGCTCTTTATTCAAAATCAAAGCCTTTTTCTATCAACATTTTATCTAAGAAGTCCCAATCTACATGGTCACCAGCCCTTTTTTAGTCGATTTTTAGAAAATGGCCACTGTGCCGTTGATCTTTAATTATCTCGTTGACAATAAGCATCTCATCTAAGATCTTTTATTTTGTGAGAAATACACTCTGATTAATGGAGATGGTGCCCCGGTGACTATAGACATCTGCTTCCTATTCTTTCATAACAATTTGTTCATCAAATGAGGTTGAGATGGTTAAGGTGTTTCTGATAACACAAAAATGAATCTTCTTACAGGAAATGATTCTTTTATATTTTTGTGTTTGATAATATATATATTTTTTATGTACTTATTGATTGTTCCACTGTGGAAAGTTTTTTTTTTCCCTGTTTTCTTTCCAACTTCAAGCATATTGTTTAAATTGTGATAGGTATGAATATCTTTTCATGCAGTGTTGGAATGGCCTCATCTGAAAGTGGACTTTTTCACGTTGATGTAATTGTTTTGGATGAAGTTCATTACCTTAGTGATATCTCTCGGGGCACAGTGTGGGAAGAGATTGTAAGTATTTGTTACTTGGGATTCTCGTTTGTCGTGTCTAACTTAGTAACGCATGTTCTATTAATAGAATTGTGTATATTTCAGGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTCTCTGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGGTAGTGTTTTCGATAAGCACCTAAGCCTGTAAAACAACCACGATTGGTGTCTCTCATATTATTATTGGCATCTGTCCTGGTAATCATGTTCAATAGTTGACCCTTTGGATTTATTCCTTCTATATGAGGGTCATAGAATTAGAACATCTTTACATTTTTCTTAAGCTCCTCTTTTTGGGTCATTCCTTTCGTGGAAGCAAAGAAATCATTGGATGAATCTTGTTTGGGCTTTTCTGTGGTCGACTTGGATGGAAAGAAATAGTAAGATTATTAAATCAAAGGAAAAAACCAATCCGGTCTTTTTTGATAGTGTTCTTTTTTTTCCTTTATCTTGGTGTAAAGTGGAGACTCTCTGTTAACTCTTCTAGCTTATCTTCTCACTTATTCAATTTGGAGATGTTCATTGTAACTCCTTGGGGCTCATCCCCCCCCCCCCTAGTATGATGGATAAAATTGTTTCTTATTAAGAAAAAAAACGAAAAAAACGAGGGACAGAGTAAGAAGTGTGATGAAGTGAGATACCATATAAAAAGATTAAGAAATGAACAATTCTTTGTTGATTTATCAGTAAAAAGAACGGTATCAAGTGTTTAGTTGCTAATGGACAAGTATCACATTCATATCTCACTCAGAACTCACTGTAGGAAGAGTGACAGTGATACTTCACTATTTGTTTTTTAGTGGAATATTTCCTCTTCTATTGCTCATTCTACATTTCTCAGACCGTATTGCATTTTGCTTATTGATACTCTAAATGGCAGTGACATGTCCATACAAAGGTACGACAACTTTAACCTATGCTTTAGATGATAGCATGTATCCAATTAAGCATACAGGACGACAAGTTCTATTAGGTCACTTTTTTGTGTGTGTTGAGGTGGATGAAGTCTCCAATACTTTATTATTAGAGATCTGAGACTTTTTGCTTATTGTCTTAGCTGATTGTTTTGATAGGAAACAGATCATAAGTATAAATAGAAGAAGGGAAAAAAATTCATTTGTGCCCCTAAACTTTGGGGGTTGTATCAATTGAAACTCAAACTAATAATTGTATAAATTGAAACCCTAAATTTTCATAAGTGAATCAATTTAGACAGTCTATTAGTCATTTATAGCTATTTTCACTTGATTCCATTTAAAATCAGCTCATAATCACTAAGTAAAATCATTTTTCTCCAAAAATCCTACCAAACTAGTAAGAAAAATTGTCACATAATTCTTTCTAAATAAGTAGAGAAAAATAATGGAAGGTGAGTAGATGAAACATCATTTAAACTTGATAAAATAAACTTCTACAGTATATTAAATTTCTGCATTTCTCTCTAATTTCCATTAGTTCTTGCATTTTGTGAAAGTTATGCATTAACGGTTTTAAAATGAAATTCTATTGGAGGTTCTAAATTGATTCACTCAGGAAAGTTCAGGGTTTAAATTGATACATTTATTAGTTTGAGTTTTTAATTAAAACAACCTCCCAACTTTAGGGTATAAATTGATTTTTTCCCATAAAAGAACAAACAATCCAATTCCTACTTAAAATAGCTATGTGGTCTACATATCTATGTTCTGAATATCACATTGGTTTCATTTTCCTCTTCTGCTGCTTGTTATAATGCAATTATTCACCCCTGGGTTTCTGCTTTACATTCGCTATCAGTCAATATTATTGCTTCCTTTCTAGGATATGAGGTCTCTAGGATATTATTGCTTCCTTTATGGTCATCAGTATGATGTTGTAAAAGTTAGTTGTTTCTTCTCAGCTTTCAAGATGAATGGGATGAGTTTTTTTATGATGTTAATGTGCTGAAAGTATGTATGGCGTGAATGTTAATTACCTTTTCTGTTCACTTCTTAAGATTCATGGTAAAACTGAGTTAGTAACATCAACAAAGCGTCCAGTACCATTGAATTGGCATTTCTCTACAAAGACCTCTTTACTTCCTCTCCTTGACGAGAAAGGAACGCACATGAATAGGTACCTTTGAATTTCTGCAAAAGTTATTGGCATAGATTTGATATTATTTAGCCTAGTGTGGCTTCTTATTGTGCTATCATAAAAATATTGAATTTTGTCTGAAGCTTTTTTTTATAGGGTTTGACTATATAATGTATTTCTTGCTTATAGTCATTTTCCTTCTTTGGGAGATCTATTTAGTATCTGATAAATTTGTAGCTTGGCCTACTAGTCAATAACAATAATAAAAGAGACAGAGAATTTGTTCAAGTTATAGTTGTCTAGATTTAATATTCTATGAGTTACCTTGAAAAAACAAATGTTGTAAGGTCTAGCAATGATCTCGTAAGAATAGTTGAGATGCGTGCAAGCTATCCCAAATGCTCATTGATATTGAAAAATAAAAGTTAAGTTTTTGTTTAAAATAAAAAGTAAAAGTAAAGGTCACAAATATAAAAATAACCAAATATGCCCATGCAACGATAAAAATATAGACACTATTTGTTTTCAGCTGACATGTTAGTCATATTTTCATTCACTCCCGCCTCGCTTATTCAACGTCACTGTGGAATTCTGAAAAAACTTAAAACTTCATATTTTTTTGCAACGGATTCTGAGTGTTTATTGTAATTTTTGTTTTTGGTTGGTCTGTTGGTATTATATAATCTATTAATGAAAGGTATCTATAACTTCTATTCTATTTCTTAATTTTATCAGTGAAAAATTTGTGTTTGCCTTGTGTGTGGTGTGTGCGTACTCGTATGAATGAGCCATTTGAAATAACTTCCCAGTGTTCACTATTTTTCTCTTTTTCCCTCTTTCCAAATTGGAGCAGGAAGCTGTCGCTCAATTATCTTCAGCTTCATGCTTCAGGAGCTAAATTGTACAAGGATGATGGATCAAGAAGAAGAAACCCAAAAAGGCATGGGAATGAGATCAGCGATGACCGCACTAGCAGCCTGTCTAGACAAGCTACACTTTCAAAGAATGACATAAACTCAATCCGCCGTTCAAATGTACTTGGTGAACCAGCCTCTCTATCGCCCTTCAACTTTTGCCAATATTATTTTGCTAAACTCAATCAAAGAATGTTCTAACAGGTTGCTTGTTACCTTTCCAGGTTCCTCAGGTCGTTGATACATTGTGGCAACTTAAGTCGAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGCAGGAAAGGATGTGATGCAGCTGTTCAGTACATTGAAGGAAAAAACCTGTTAGATGATTATGAGAGGAGTGAAGTTGAACTTGCATTGAGAAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTGTGAAAGGACTTCTGCAAGGAGTTGCTGCACATCATGCTGGTTGTCTGCCTCTGTGGAAGTCTTTCATTGAAGAGCTGTTTCAGAGGGGACTAGTGAAGGTTGTCTTCGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGCAAACGAAGCAATAGTGGTCGTACCCAGTTAACCTCAAATGAACTGCTTCAAATGGCAGGGCGAGCTGGACGTCGAGGTATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAGTGCTGCAAGCTCCTGTTTGCTGGCATCGAACCACTTGTTTCTCAGTTTACAGCTTCATATGGAATGGTATTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACGAGTGAAATGGATGGGACAAAAGCTTTCCAAGCTGGGCGAACGCTGGAAGAAGCTAGGAAGTTGGTTGAGCAGAGTTTTGGAAACTATGTTGGGAGCAATGTCATGATTGCAGCAAAGGAGGAGCTTGTTAAAATAGAAAAAGAGATTGAAGTGCTCAATTTAGAAATAACTGATGAAGCAATTGATAAAAAATGCAGGAGGCTCATGTCAGATGTGGCATATAACGAGTTAGTAGAGCTGCAGGAGGGACTGCGATCAGATAAACGTCAAAGGACGGAACTACGAAAAGAGATGGAATTGCAAAGAATTTGTGCCCTCAAGTCTCTGTTACAAAATTTAGGAGATGGACAGTTGCCCTTTTTATGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTGCAGTTCTCTTTGGAAACATGGACTCATCAAAGCTCATTAACATGTTTCCTGCTGATAATTCTTTGAGTGGTGCAGAACCAAATCTTGGTAAAAATCTGGACCCAGGTGCTGAATCATCTTATTATGTGGCTCTAGGTTCAGATAATTCTTGGTACCTATTTACTGAGAAATGGATCAAAACTGTTTATAAAACTGGCTTTCCTAATGTTGCTTTAACTAAAGGGGATCCTTTACCTCGGGAGATTATGAGGACACTTCTGGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTATCATGTATGGAAGGATCTCTGGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTGAATCATACATGGAATCCTTAACAAGGTACAAGGAGCAAAGAAATAAAGTTTCACGATTTAAGAAAAGGATATCTAGAACAAAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATATTATAGAGGACAAGATTAGACAATTGAAGGCTAGATATAAACGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGCTGGAAAGAGTTTTTGCAGATCAGCAATGTCATACACGAAATTAGAGCACTGGATATAAATTCTCATGTAATGTTCCCACTCGGAGAAACTGCAGCTGCTATCCGTGGTGAAAATGAGCTCTGGATTGCCGTGGTTCTAAGAAATAAGTTCTTAGTACAACTAAAACCTACAGAGCTTGCTGGTGTCTGTGCAAGTTTAGTTTCTGAAGGCATCAAAATCCGCCCCGGAAGAGATAACAATTACATATTTGAGCCATCAAGAACTGTAATTAATATGGTTAATTTCTTAGAAGAGCAGAGAAATTCTCTGTTAGATCTTCAACAAAAGCATGGAGTGGACATACCATGTTCCTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCCTCTGGTTTGACTTGGAGAGAAATAATGATGGATTGTGCGATGGATGAGGGAGATCTGGCACGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAAATTCCGAAGTTGCCTGATATTGATCCATCTTTGCAAAGAAATGCATCAACTGCTTCTGATGTCATGAATCGTTCACCAATAAGCGAATTGGCTGGATAAGCTCGTCTGAAAATGGTGTCCCTCTGGTTTGTTTCCAAAAAACGTTGCCCTTTTTAGATGAATATGTTAATTATTCTTCATGCTGCATTTTTCACAAGGCAATTAACAGTGGCGGGGCATGTTCTTACAAGGCCGTTTAGCTGTTGGCTCAAGTGAACATAACACGTCCTCTAAGAAGCAAGCTGCTTTAAGGTGCGAATACCTCGTATGCATTCAATTTTTTGTCACTTAAAAAAATCATTTGCACAATGATAACAAAATTCTAATAGATTATGCTGAACCAATCTTTTTATAGGCTAAGTTAAATTATAATTCGATATAAATTTTCATGGAAATTTGTGAACCATTGAATCGTTTATTAGGATTCTATTTTTGTTTTTGAATTATTACAGATATTTAAGCATAATCCCTACGTGTTCAAACCGTCTACTTTAATTTCACTACTTTTTAAACTTTTTTTTTTTTTTTTCCTAAAAGAAACCGTTCATTCATTCATAGAAGACTGTGTTTACCCAAGTCAAGGTAACTTTTTTCGTTGGCACTGGTAAGAAGAGCGTATGAAATTTTAATTATATGCTAAATAGGTCTCAACAAACTTTTAATTCCAAGTCAAATAAATCTGTGATTGAGTTTTTCTTAGCTGAAGGAGTGTTGTGAGATTTTATGTCAGGCTATTACACGAGATGAGATTCATAGTGTATTTCCGTGTTATTTCTTTGACATTGTCTTTCTTTCCCTAGGTATGAATGCGACATCAATCACCTTTGTTCCAAAAAGGTTGTACCCGAGAGGTGTTGGTGACATACAATCAATTTCTTGCTTTAATGTGTTTTAGAAGAACATTCTTGGGTTGTGTGCTTGGCGAACCAAAAGATTTAGGTATGGGGTTTGTTTGCAATAAACCTATCCTGAAAACACATGAAGATATTGCAATAAACAAAGGGAAAGTGAGGATTGGTCAAAATTGTTTGAATCTCCATCAAATGGAGTTGGAGGCTGATGATCCACTAGAACTAAACAATTGGAAACATCGTAGTTAAAACAAACACATTTTAGGTGGAAAGCGTTCAAAATAAGAATAACAAGAATGAGATATAATAAAGCCGATTTGAATGGAAAGTGAAATCTTGAGAGGGCATTCACCATGGGCTATTGCGTGGATAATTGAAGTTAGTAGCTTGGAGTTGGCTTTTGGAGAGCGCGGGGTGTGCAGGGGCAGT

mRNA sequence

CTAAAAGAAAAGAAAATCTAGTTATCCAAAGAGAGTAGCCGAGCCTAAGTTCGGCGTCATGCCCTCTCCCGCCATTAACGTTTTCTCCATCATTTCTCCCCAACATCTCTGGCCGCCATTATCTTATCCTTTCCCCTCCTCTCTATGTCCTCGTTGTTCTTCACCTCCGATTCAGGCCACGAGGTTTTGTCGCCTTAAACCTCTCCCCATCTTCTCTCCCTTTCCAGTTCCATTTCGACCTTCCGTCCGCTCTCCGAGGTCCATTTTCTCTGAAAAACCTCAACTCTCCGATGTCGACGAAGACGAGGATGAGGATGAGGATGAAGATGAAGATGAAGATGACGACGACGACGACGACGTGGCAGCCGAGGAGTACGATATCGATGCGTTTGGAGAATTGGAGCAGAGGTACGATGAAGTGGAATTGTCGATGGAAGCTACTGAAATCTCCATTGCACCTGAGGAGTTCAAATCGCAGAGAGTCGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTGTCGATGTTGATGAACTCGCTTCAGTTTATAATTTCCGTATCGACAAGTTTCAGCGACAAGCCATAGAAGCATTCTTGAGAGGATCGTCGGTGGTGGTATCGGCGCCTACCAGCAGTGGCAAGACTTTGATTGCGGAGGCGGCGGCTGTTGCTACTGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAGTTTCGGGAGTTCCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTTACGGGAGATTCTGCAGTTAATAAAGATGCCCTGGTTTTGATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCTCATCTGAAAGTGGACTTTTTCACGTTGATGTAATTGTTTTGGATGAAGTTCATTACCTTAGTGATATCTCTCGGGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTCTCTGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGATTCATGGTAAAACTGAGTTAGTAACATCAACAAAGCGTCCAGTACCATTGAATTGGCATTTCTCTACAAAGACCTCTTTACTTCCTCTCCTTGACGAGAAAGGAACGCACATGAATAGGAAGCTGTCGCTCAATTATCTTCAGCTTCATGCTTCAGGAGCTAAATTGTACAAGGATGATGGATCAAGAAGAAGAAACCCAAAAAGGCATGGGAATGAGATCAGCGATGACCGCACTAGCAGCCTGTCTAGACAAGCTACACTTTCAAAGAATGACATAAACTCAATCCGCCGTTCAAATGTTCCTCAGGTCGTTGATACATTGTGGCAACTTAAGTCGAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGCAGGAAAGGATGTGATGCAGCTGTTCAGTACATTGAAGGAAAAAACCTGTTAGATGATTATGAGAGGAGTGAAGTTGAACTTGCATTGAGAAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTGTGAAAGGACTTCTGCAAGGAGTTGCTGCACATCATGCTGGTTGTCTGCCTCTGTGGAAGTCTTTCATTGAAGAGCTGTTTCAGAGGGGACTAGTGAAGGTTGTCTTCGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGCAAACGAAGCAATAGTGGTCGTACCCAGTTAACCTCAAATGAACTGCTTCAAATGGCAGGGCGAGCTGGACGTCGAGGTATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAGTGCTGCAAGCTCCTGTTTGCTGGCATCGAACCACTTGTTTCTCAGTTTACAGCTTCATATGGAATGGTATTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACGAGTGAAATGGATGGGACAAAAGCTTTCCAAGCTGGGCGAACGCTGGAAGAAGCTAGGAAGTTGGTTGAGCAGAGTTTTGGAAACTATGTTGGGAGCAATGTCATGATTGCAGCAAAGGAGGAGCTTGTTAAAATAGAAAAAGAGATTGAAGTGCTCAATTTAGAAATAACTGATGAAGCAATTGATAAAAAATGCAGGAGGCTCATGTCAGATGTGGCATATAACGAGTTAGTAGAGCTGCAGGAGGGACTGCGATCAGATAAACGTCAAAGGACGGAACTACGAAAAGAGATGGAATTGCAAAGAATTTGTGCCCTCAAGTCTCTGTTACAAAATTTAGGAGATGGACAGTTGCCCTTTTTATGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTGCAGTTCTCTTTGGAAACATGGACTCATCAAAGCTCATTAACATGTTTCCTGCTGATAATTCTTTGAGTGGTGCAGAACCAAATCTTGGTAAAAATCTGGACCCAGGTGCTGAATCATCTTATTATGTGGCTCTAGGTTCAGATAATTCTTGGTACCTATTTACTGAGAAATGGATCAAAACTGTTTATAAAACTGGCTTTCCTAATGTTGCTTTAACTAAAGGGGATCCTTTACCTCGGGAGATTATGAGGACACTTCTGGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTATCATGTATGGAAGGATCTCTGGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTGAATCATACATGGAATCCTTAACAAGGTACAAGGAGCAAAGAAATAAAGTTTCACGATTTAAGAAAAGGATATCTAGAACAAAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATATTATAGAGGACAAGATTAGACAATTGAAGGCTAGATATAAACGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGCTGGAAAGAGTTTTTGCAGATCAGCAATGTCATACACGAAATTAGAGCACTGGATATAAATTCTCATGTAATGTTCCCACTCGGAGAAACTGCAGCTGCTATCCGTGGTGAAAATGAGCTCTGGATTGCCGTGGTTCTAAGAAATAAGTTCTTAGTACAACTAAAACCTACAGAGCTTGCTGGTGTCTGTGCAAGTTTAGTTTCTGAAGGCATCAAAATCCGCCCCGGAAGAGATAACAATTACATATTTGAGCCATCAAGAACTGTAATTAATATGGTTAATTTCTTAGAAGAGCAGAGAAATTCTCTGTTAGATCTTCAACAAAAGCATGGAGTGGACATACCATGTTCCTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCCTCTGGTTTGACTTGGAGAGAAATAATGATGGATTGTGCGATGGATGAGGGAGATCTGGCACGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAAATTCCGAAGTTGCCTGATATTGATCCATCTTTGCAAAGAAATGCATCAACTGCTTCTGATGTCATGAATCGTTCACCAATAAGCGAATTGGCTGGATAAGCTCGTCTGAAAATGGTGTCCCTCTGGTTTGTTTCCAAAAAACGTTGCCCTTTTTAGATGAATATGTTAATTATTCTTCATGCTGCATTTTTCACAAGGCAATTAACAGTGGCGGGGCATGTTCTTACAAGGCCGTTTAGCTGTTGGCTCAAGTGAACATAACACGTCCTCTAAGAAGCAAGCTGCTTTAAGGTATGAATGCGACATCAATCACCTTTGTTCCAAAAAGGTTGTACCCGAGAGGTGTTGGTGACATACAATCAATTTCTTGCTTTAATGTGTTTTAGAAGAACATTCTTGGGTTGTGTGCTTGGCGAACCAAAAGATTTAGGTATGGGGTTTGTTTGCAATAAACCTATCCTGAAAACACATGAAGATATTGCAATAAACAAAGGGAAAGTGAGGATTGGTCAAAATTGTTTGAATCTCCATCAAATGGAGTTGGAGGCTGATGATCCACTAGAACTAAACAATTGGAAACATCGTAGTTAAAACAAACACATTTTAGGTGGAAAGCGTTCAAAATAAGAATAACAAGAATGAGATATAATAAAGCCGATTTGAATGGAAAGTGAAATCTTGAGAGGGCATTCACCATGGGCTATTGCGTGGATAATTGAAGTTAGTAGCTTGGAGTTGGCTTTTGGAGAGCGCGGGGTGTGCAGGGGCAGT

Coding sequence (CDS)

ATGCCCTCTCCCGCCATTAACGTTTTCTCCATCATTTCTCCCCAACATCTCTGGCCGCCATTATCTTATCCTTTCCCCTCCTCTCTATGTCCTCGTTGTTCTTCACCTCCGATTCAGGCCACGAGGTTTTGTCGCCTTAAACCTCTCCCCATCTTCTCTCCCTTTCCAGTTCCATTTCGACCTTCCGTCCGCTCTCCGAGGTCCATTTTCTCTGAAAAACCTCAACTCTCCGATGTCGACGAAGACGAGGATGAGGATGAGGATGAAGATGAAGATGAAGATGACGACGACGACGACGACGTGGCAGCCGAGGAGTACGATATCGATGCGTTTGGAGAATTGGAGCAGAGGTACGATGAAGTGGAATTGTCGATGGAAGCTACTGAAATCTCCATTGCACCTGAGGAGTTCAAATCGCAGAGAGTCGAAAAGCTTCTCGGTGAAGTTAGAGAGTTTGGAGAAGGAATTGTCGATGTTGATGAACTCGCTTCAGTTTATAATTTCCGTATCGACAAGTTTCAGCGACAAGCCATAGAAGCATTCTTGAGAGGATCGTCGGTGGTGGTATCGGCGCCTACCAGCAGTGGCAAGACTTTGATTGCGGAGGCGGCGGCTGTTGCTACTGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAGTTTCGGGAGTTCCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTTACGGGAGATTCTGCAGTTAATAAAGATGCCCTGGTTTTGATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCTCATCTGAAAGTGGACTTTTTCACGTTGATGTAATTGTTTTGGATGAAGTTCATTACCTTAGTGATATCTCTCGGGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAGCTTATTTGTCTCTCTGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGATTCATGGTAAAACTGAGTTAGTAACATCAACAAAGCGTCCAGTACCATTGAATTGGCATTTCTCTACAAAGACCTCTTTACTTCCTCTCCTTGACGAGAAAGGAACGCACATGAATAGGAAGCTGTCGCTCAATTATCTTCAGCTTCATGCTTCAGGAGCTAAATTGTACAAGGATGATGGATCAAGAAGAAGAAACCCAAAAAGGCATGGGAATGAGATCAGCGATGACCGCACTAGCAGCCTGTCTAGACAAGCTACACTTTCAAAGAATGACATAAACTCAATCCGCCGTTCAAATGTTCCTCAGGTCGTTGATACATTGTGGCAACTTAAGTCGAAAGATATGCTGCCTGCAGTTTGGTTTATATTTAGCAGGAAAGGATGTGATGCAGCTGTTCAGTACATTGAAGGAAAAAACCTGTTAGATGATTATGAGAGGAGTGAAGTTGAACTTGCATTGAGAAAATTTCGTATTCAATTTCCAGATGCTGTCCGGGAATCGGCTGTGAAAGGACTTCTGCAAGGAGTTGCTGCACATCATGCTGGTTGTCTGCCTCTGTGGAAGTCTTTCATTGAAGAGCTGTTTCAGAGGGGACTAGTGAAGGTTGTCTTCGCAACAGAAACATTAGCTGCTGGAATCAACATGCCAGCTAGGACAGCAGTTATTGCATCCCTGAGCAAACGAAGCAATAGTGGTCGTACCCAGTTAACCTCAAATGAACTGCTTCAAATGGCAGGGCGAGCTGGACGTCGAGGTATTGATAAAAAAGGTCATGTGGTGCTTCTTCAAACTCCATATGAAGGTGCTGAAGAGTGCTGCAAGCTCCTGTTTGCTGGCATCGAACCACTTGTTTCTCAGTTTACAGCTTCATATGGAATGGTATTGAATCTTCTCGCAGGTGCAAAGGTTACTCATACGAGTGAAATGGATGGGACAAAAGCTTTCCAAGCTGGGCGAACGCTGGAAGAAGCTAGGAAGTTGGTTGAGCAGAGTTTTGGAAACTATGTTGGGAGCAATGTCATGATTGCAGCAAAGGAGGAGCTTGTTAAAATAGAAAAAGAGATTGAAGTGCTCAATTTAGAAATAACTGATGAAGCAATTGATAAAAAATGCAGGAGGCTCATGTCAGATGTGGCATATAACGAGTTAGTAGAGCTGCAGGAGGGACTGCGATCAGATAAACGTCAAAGGACGGAACTACGAAAAGAGATGGAATTGCAAAGAATTTGTGCCCTCAAGTCTCTGTTACAAAATTTAGGAGATGGACAGTTGCCCTTTTTATGTTTGCAATACAAAGATTCTGAAGGAGTCCAACATTCAATTCCTGCAGTTCTCTTTGGAAACATGGACTCATCAAAGCTCATTAACATGTTTCCTGCTGATAATTCTTTGAGTGGTGCAGAACCAAATCTTGGTAAAAATCTGGACCCAGGTGCTGAATCATCTTATTATGTGGCTCTAGGTTCAGATAATTCTTGGTACCTATTTACTGAGAAATGGATCAAAACTGTTTATAAAACTGGCTTTCCTAATGTTGCTTTAACTAAAGGGGATCCTTTACCTCGGGAGATTATGAGGACACTTCTGGATAAAGAGGGAATGAAGTGGGAGAAGCTTGCTGATTCTGAGCTTGGCAGTTTATCATGTATGGAAGGATCTCTGGAAACATGGTCATGGAGTTTAAACGTGCCAGTTCTGAATAGTCTTTCTGAAAATGACGAACTCTTGCAAATGTCTGAATCATACATGGAATCCTTAACAAGGTACAAGGAGCAAAGAAATAAAGTTTCACGATTTAAGAAAAGGATATCTAGAACAAAAGGATTCAGAGAGTACAAGAAGATTTTAGATATGGCCAATATTATAGAGGACAAGATTAGACAATTGAAGGCTAGATATAAACGGCTAAGTAATCGAATTCAGCAAATCGAACCATCAGGCTGGAAAGAGTTTTTGCAGATCAGCAATGTCATACACGAAATTAGAGCACTGGATATAAATTCTCATGTAATGTTCCCACTCGGAGAAACTGCAGCTGCTATCCGTGGTGAAAATGAGCTCTGGATTGCCGTGGTTCTAAGAAATAAGTTCTTAGTACAACTAAAACCTACAGAGCTTGCTGGTGTCTGTGCAAGTTTAGTTTCTGAAGGCATCAAAATCCGCCCCGGAAGAGATAACAATTACATATTTGAGCCATCAAGAACTGTAATTAATATGGTTAATTTCTTAGAAGAGCAGAGAAATTCTCTGTTAGATCTTCAACAAAAGCATGGAGTGGACATACCATGTTCCTTGGACAGCCAATTTTCAGGAATGGTTGAGGCTTGGGCCTCTGGTTTGACTTGGAGAGAAATAATGATGGATTGTGCGATGGATGAGGGAGATCTGGCACGCCTCTTGCGACGAACAATCGACTTGTTGGCTCAAATTCCGAAGTTGCCTGATATTGATCCATCTTTGCAAAGAAATGCATCAACTGCTTCTGATGTCATGAATCGTTCACCAATAAGCGAATTGGCTGGATAA

Protein sequence

MPSPAINVFSIISPQHLWPPLSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPFRPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPAVLFGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG
BLAST of Cp4.1LG11g07540 vs. Swiss-Prot
Match: ISE2_ARATH (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana GN=ISE2 PE=1 SV=2)

HSP 1 Score: 1494.2 bits (3867), Expect = 0.0e+00
Identity = 789/1128 (69.95%), Postives = 943/1128 (83.60%), Query Frame = 1

Query: 71   SEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD-----EVELSM 130
            S  P  S + E+ED++E+E+EDEDDDD+   AA+EYD +   E+    D     E E S+
Sbjct: 54   SLSPSQSQLYEEEDDEEEEEEDEDDDDE---AADEYD-NISDEIRNSDDDDDDEETEFSV 113

Query: 131  EA-TEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAFLRG 190
            +  TE +    EF+ QRVEKL   VR+FG  ++D+DEL S+Y+FRIDKFQR AIEAFLRG
Sbjct: 114  DLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEAFLRG 173

Query: 191  SSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLL 250
            SSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD NVGLL
Sbjct: 174  SSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDNVGLL 233

Query: 251  TGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRGTVW 310
            TGDSA+NKDA ++IMTTEILRNMLYQSVGMASS +GLFHVD IVLDEVHYLSDISRGTVW
Sbjct: 234  TGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRGTVW 293

Query: 311  EEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFSTKTSLL 370
            EEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTST+RPVPL W+FSTK SLL
Sbjct: 294  EEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTKHSLL 353

Query: 371  PLLDEKGTHMNRKLSLNYLQLHASGAKLYKDD-GSRRRNPKRHGNEISDDRTSSLSRQAT 430
            PLLDEKG ++NRKLSLNYLQL AS A+   DD G R+R  K+ G + S +   +++    
Sbjct: 354  PLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT-DYP 413

Query: 431  LSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDYER 490
            LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+E   LLDD E+
Sbjct: 414  LSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEK 473

Query: 491  SEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFAT 550
            SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKVVFAT
Sbjct: 474  SEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFAT 533

Query: 551  ETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPY 610
            ETLAAGINMPARTAVI+SLSK++ + R +L  NEL QMAGRAGRRGID+KG+ VL+QT +
Sbjct: 534  ETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLVQTAF 593

Query: 611  EGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSE-MDGTKAFQAGRTLEEAR 670
            EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT  S   +  K  QAGR+LEEA+
Sbjct: 594  EGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSLEEAK 653

Query: 671  KLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNELVE 730
            KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAIDKK R+L+S   Y E+  
Sbjct: 654  KLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYKEITV 713

Query: 731  LQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPAVL 790
            L+E LR +KR+R E R+ MEL+R  ALK LL+ + +G LPF+CL++KDSEG + S+PAV 
Sbjct: 714  LKEELREEKRKRAEQRRRMELERFLALKPLLKGMEEGNLPFICLEFKDSEGREQSVPAVY 773

Query: 791  FGNMDS---SKLINMFPADNS---------LSGAEPNLGKNLDPGAESSYYVALGSDNSW 850
             G++DS   SKL  M   D S         L+  EP  GK   P  + SYYVALGSDNSW
Sbjct: 774  LGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEP--GK---PNVKPSYYVALGSDNSW 833

Query: 851  YLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGS 910
            YLFTEKW++TVY+TGFPN+AL  GD LPREIM+ LLDK  M+W+KLA+SELGSL  +EGS
Sbjct: 834  YLFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGS 893

Query: 911  LETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYK 970
            LETWSWSLNVPVL+SLS+ DE+L MSE Y  +  +YKEQR+K+SR KK++SR++GFREYK
Sbjct: 894  LETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYK 953

Query: 971  KILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFP 1030
            KIL+ AN+  +K+++LKAR +RL NR++QIEPSGWK+F++ISNVIHE RALDIN+H++FP
Sbjct: 954  KILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFP 1013

Query: 1031 LGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPS 1090
            LGETAAAIRGENELW+A+VLRNK LV LKP +LAGVCASLVSEGIK+RP RDNNYI+EPS
Sbjct: 1014 LGETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPS 1073

Query: 1091 RTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDE 1150
             TV++MVNFLE+QR+SL+ LQ+KH V IPC LD QFSGMVEAWASGL+W+E+MM+CAMDE
Sbjct: 1074 DTVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDE 1133

Query: 1151 GDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            GDLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+R PISELAG
Sbjct: 1134 GDLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171

BLAST of Cp4.1LG11g07540 vs. Swiss-Prot
Match: HELY_MYCLE (Probable helicase HelY OS=Mycobacterium leprae (strain TN) GN=helY PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-82
Identity = 208/532 (39.10%), Postives = 287/532 (53.95%), Query Frame = 1

Query: 156 IVDVDELA---SVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARK 215
           + D+ ELA   +   F +D FQ++A  A  RG  V+V APT +GKT++ E A    +A  
Sbjct: 1   MTDLAELARFTAELPFSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAG 60

Query: 216 RRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSV 275
            + FYTTPLKALSNQK+ +    +G + +GLLTGD +VN D+ V++MTTE+LRNMLY   
Sbjct: 61  GKCFYTTPLKALSNQKYTDLTARYGRNRIGLLTGDQSVNGDSPVVVMTTEVLRNMLYAD- 120

Query: 276 GMASSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAG 335
             + +  GL HV   V+DEVH+++D  RG VWEE++++ P +V+++ LSATV+N +E  G
Sbjct: 121 --SFALQGLSHV---VMDEVHFIADRMRGPVWEEVILHLPDDVRMVSLSATVSNAEEFGG 180

Query: 336 WIGQIHGKTELVTSTKRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKL 395
           W+  + G T +V    RPVPL  H      L  L D         ++ N L+ H +  + 
Sbjct: 181 WVQTVRGDTTVVVDEHRPVPLWQHVLVGKRLFDLFDYDSNVDQSPVNPNLLR-HIAHCR- 240

Query: 396 YKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDM 455
             D  S  RNP+R              R + +      S+ R  V  ++D      ++ +
Sbjct: 241 EADRMSDWRNPRRRAG-----------RGSGVRPRFYRSLARPEVIAILD------AEGL 300

Query: 456 LPAVWFIFSRKGCDAAVQYI--EGKNLLDDYERSEVELALRKFRIQFPDAVRESAV---- 515
           LPA+ F+FSR GCDAAVQ        L  + ER+++   +        DA  + AV    
Sbjct: 301 LPAITFVFSRFGCDAAVQQCLRSPLRLTSEEERAQIAEVIDHRCGDLADA--DLAVLGYY 360

Query: 516 ---KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLS 575
              +GLL+G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMPART V+  L 
Sbjct: 361 EWREGLLRGLAAHHAGMLPAFRHAVEELFTAGLVKAVFATETLALGINMPARTVVLERLV 420

Query: 576 KRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYE---GAEECCKLLFAGIEPL 635
           K +      LT  E  Q+ GRAGRRGID +GH V++  P E   G      L  A   PL
Sbjct: 421 KFNGKQHVPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPSEDTSGPSAVAGLASARTFPL 480

Query: 636 VSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNY 673
            S F  SY M +NL+                     + E A  L+EQSF  Y
Sbjct: 481 RSSFVPSYNMTINLV------------------HWMSPERAHALLEQSFAQY 487

BLAST of Cp4.1LG11g07540 vs. Swiss-Prot
Match: HELY_MYCTO (Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=helY PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-79
Identity = 199/530 (37.55%), Postives = 274/530 (51.70%), Query Frame = 1

Query: 156 IVDVDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 215
           + ++D   +   F +D FQ++A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 216 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMA 275
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +A V++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 276 SSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 335
           +    L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183

Query: 336 QIHGKTELVTSTKRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQL----HASGAK 395
            + G T +V    RPVPL  H      +  L D +      +  +N   L    H   A 
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNRELLRHIAHRREAD 243

Query: 396 LYKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKD 455
              D   RRR   R G                         R    P+V+    +L ++ 
Sbjct: 244 RMADWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDAEG 303

Query: 456 MLPAVWFIFSRKGCDAAVQYI--EGKNLLDDYERSEVELALRKFRIQFPDAVRESAV--- 515
           +LPA+ F+FSR GCDAAV         L  + ER+ +   +        D+  + AV   
Sbjct: 304 LLPAITFVFSRAGCDAAVTQCLRSPLRLTSEEERARIAEVIDHRCGDLADS--DLAVLGY 363

Query: 516 ----KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASL 575
               +GLL+G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMPART V+  L
Sbjct: 364 YEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERL 423

Query: 576 SKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVS 635
            K +      LT  E  Q+ GRAGRRGID +GH V++  P     E   L      PL S
Sbjct: 424 VKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLASTRTFPLRS 481

Query: 636 QFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNY 673
            F  SY M +NL+                 + G   ++A +L+EQSF  Y
Sbjct: 484 SFAPSYNMTINLV----------------HRMGP--QQAHRLLEQSFAQY 481

BLAST of Cp4.1LG11g07540 vs. Swiss-Prot
Match: HELY_MYCTU (Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=helY PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-79
Identity = 199/530 (37.55%), Postives = 274/530 (51.70%), Query Frame = 1

Query: 156 IVDVDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 215
           + ++D   +   F +D FQ++A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 216 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMA 275
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +A V++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 276 SSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 335
           +    L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 183

Query: 336 QIHGKTELVTSTKRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQL----HASGAK 395
            + G T +V    RPVPL  H      +  L D +      +  +N   L    H   A 
Sbjct: 184 TVRGDTTVVVDEHRPVPLWQHVLVGKRMFDLFDYRIGEAEGQPQVNRELLRHIAHRREAD 243

Query: 396 LYKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKD 455
              D   RRR   R G                         R    P+V+    +L ++ 
Sbjct: 244 RMADWQPRRRGSGRPG-----------------------FYRPPGRPEVIA---KLDAEG 303

Query: 456 MLPAVWFIFSRKGCDAAVQYI--EGKNLLDDYERSEVELALRKFRIQFPDAVRESAV--- 515
           +LPA+ F+FSR GCDAAV         L  + ER+ +   +        D+  + AV   
Sbjct: 304 LLPAITFVFSRAGCDAAVTQCLRSPLRLTSEEERARIAEVIDHRCGDLADS--DLAVLGY 363

Query: 516 ----KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASL 575
               +GLL+G+AAHHAG LP ++  +EELF  GLVK VFATETLA GINMPART V+  L
Sbjct: 364 YEWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERL 423

Query: 576 SKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVS 635
            K +      LT  E  Q+ GRAGRRGID +GH V++  P     E   L      PL S
Sbjct: 424 VKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLASTRTFPLRS 481

Query: 636 QFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNY 673
            F  SY M +NL+                 + G   ++A +L+EQSF  Y
Sbjct: 484 SFAPSYNMTINLV----------------HRMGP--QQAHRLLEQSFAQY 481

BLAST of Cp4.1LG11g07540 vs. Swiss-Prot
Match: SKI2_SCHPO (Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.03c PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-77
Identity = 192/568 (33.80%), Postives = 291/568 (51.23%), Query Frame = 1

Query: 159 VDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYT 218
           V E+A  + F +D FQ++AI     G SV V+A TS+GKT++AE A         +  YT
Sbjct: 270 VPEMALDFPFELDNFQKEAIYHLEMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTKAIYT 329

Query: 219 TPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSE 278
           +P+KALSNQKFR+F+  F D  VG+LTGD  VN +   L+MTTEILR+MLY+   +    
Sbjct: 330 SPIKALSNQKFRDFKHKFED--VGILTGDVQVNPEGSCLLMTTEILRSMLYRGADLIRD- 389

Query: 279 SGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIH 338
                V+ ++ DEVHY++D+ RG VWEE++I  P  V LI LSATV N  E A W+G+  
Sbjct: 390 -----VEFVIFDEVHYVNDLERGVVWEEVIIMLPPHVTLILLSATVPNTKEFASWVGRTK 449

Query: 339 GKTELVTST-KRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDG 398
            K   V ST KRPVPL  +   K ++  ++D+ G    R L   Y    A+ A    D  
Sbjct: 450 KKNIYVISTLKRPVPLEHYLWVKQNMFKIVDQHG----RFLMDGYKS--ANDALKKPDKP 509

Query: 399 SRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVW 458
              ++ K         R   +       +    S+ R +    V  +  L  +++LP + 
Sbjct: 510 VIAKDNKNSARGRGAARGRGVQTNMMRGRGSAKSVERRDANTWVHLIGHLHKQNLLPVIV 569

Query: 459 FIFSRKGCDAAVQYIEGKNLLDDYERSEVELALRKFRIQFPDAVRESAVKG-----LLQG 518
           F+FS+K C+  V  +  ++L +  E+SEV + + K   +     R     G     L +G
Sbjct: 570 FVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARLKKEDRLLPQIGRMREMLSRG 629

Query: 519 VAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQ 578
           +A HH G LP+ K  +E LFQRGLVKV+FATET A G+NMPA++ V +   K        
Sbjct: 630 LAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRD 689

Query: 579 LTSNELLQMAGRAGRRGIDKKGHVVLL-QTPYEGAEECCKLLFAGIEPLVSQFTASYGMV 638
           L   E  Q +GRAGRRG+D  G V++L ++          ++      L+SQF  +Y M+
Sbjct: 690 LLPGEYTQCSGRAGRRGLDVTGTVIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMI 749

Query: 639 LNLLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKE 698
           LNLL    +                       ++++SF   V   ++   +E++   E++
Sbjct: 750 LNLLRVETL-------------------RIEDMIKRSFSENVNQTLVPQHEEKIKSFEEK 804

Query: 699 IEVLNLEITDEAIDKKCRRLMSDVAYNE 720
           +  L  E++D  + +    L+S  ++ E
Sbjct: 810 LSALKKEMSDVDLKEIKSCLLSSESFKE 804

BLAST of Cp4.1LG11g07540 vs. TrEMBL
Match: A0A0A0KNK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484640 PE=4 SV=1)

HSP 1 Score: 2001.5 bits (5184), Expect = 0.0e+00
Identity = 1048/1179 (88.89%), Postives = 1094/1179 (92.79%), Query Frame = 1

Query: 1    MPSPAINVFSIISPQHLWPP-LSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 60
            M  PAINV+SIIS QHL PP LSYPFPS L P  S     A+RFC  KPL  +S  PVPF
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD 120
            RPS  SPRSIFSEK QLSDVDEDEDEDEDE      DD+DDVAAEEYD DA G  EQ YD
Sbjct: 61   RPSFHSPRSIFSEKSQLSDVDEDEDEDEDE------DDEDDVAAEEYDSDALGGFEQSYD 120

Query: 121  EVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIE 180
            EVELSM+ +EIS A +EFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR A++
Sbjct: 121  EVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQ 180

Query: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240
            AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS
Sbjct: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240

Query: 241  NVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDIS 300
            NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSDIS
Sbjct: 241  NVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDIS 300

Query: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFST 360
            RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPL WHFST
Sbjct: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFST 360

Query: 361  KTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLS 420
            KTSLLPLLDEKG  MNRKLSLNYLQL+ASG K  KDDGSRRR PKR GNEIS D   S+S
Sbjct: 361  KTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMS 420

Query: 421  RQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLD 480
            RQATLSKNDINSIRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+  NLLD
Sbjct: 421  RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 480

Query: 481  DYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540
            D ERSEVELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 481  DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540

Query: 541  VFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLL 600
            VFATETLAAGINMPARTAVIASLSKRSN+GRT L+ NELLQMAGRAGRRGIDKKGHVVLL
Sbjct: 541  VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 600

Query: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLE 660
            QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TKAFQA RTLE
Sbjct: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLE 660

Query: 661  EARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNE 720
            EARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+ +SD+AYNE
Sbjct: 661  EARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNE 720

Query: 721  LVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIP 780
            + ELQE LR +KR RTELRKEME QRICAL SLL+NLGDG LPFLCLQYKDSEGVQHSIP
Sbjct: 721  IAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIP 780

Query: 781  AVLFGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSWYLFTEKWIK 840
             VL GNMDSSKL NMFPAD+SLSGAE NLG  L+PGAESSYYVALGSDNSWYLFTEKWIK
Sbjct: 781  TVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIK 840

Query: 841  TVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLN 900
            TVYKTGFPNVAL+KGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGSLETWSWSLN
Sbjct: 841  TVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLN 900

Query: 901  VPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMANII 960
            VPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRIS+T+GFREYKKILDMAN+I
Sbjct: 901  VPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLI 960

Query: 961  EDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIR 1020
            EDKIRQLK RYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDIN+HVMFPLGETAAAIR
Sbjct: 961  EDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIR 1020

Query: 1021 GENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNF 1080
            GENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPSRTVINM+NF
Sbjct: 1021 GENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINF 1080

Query: 1081 LEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR 1140
            LEEQRNSL DLQ+KHGV+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR
Sbjct: 1081 LEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR 1140

Query: 1141 TIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            TIDLLAQIPKLPDIDPSLQRNASTASDVMNR PISELAG
Sbjct: 1141 TIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1168

BLAST of Cp4.1LG11g07540 vs. TrEMBL
Match: M5Y8A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000444mg PE=4 SV=1)

HSP 1 Score: 1643.6 bits (4255), Expect = 0.0e+00
Identity = 874/1191 (73.38%), Postives = 999/1191 (83.88%), Query Frame = 1

Query: 6    INVFSIISPQHLWPPL------SYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 65
            ++  SI++P H +  L      SYP    L     +       FC  K  P +SP  + F
Sbjct: 1    MDTLSILTPPHTFTRLLSLKRSSYPLLHHL-----TQTTHVLGFCSPKSPPTYSPSSLRF 60

Query: 66   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGE-----L 125
            R + +SP S F  K QLSD DE+EDEDE E+ED    DD+DVAA+EYD D  G+     L
Sbjct: 61   RVTFQSPSSAFPAKSQLSDADEEEDEDEYEEED----DDEDVAADEYD-DVPGDIMSDGL 120

Query: 126  EQRYDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQ 185
            EQ  DE++ SM A E S  PEEFK QRVEKL  EV+ FGE ++D +ELAS+Y+FRIDKFQ
Sbjct: 121  EQSDDEIDTSMAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQ 180

Query: 186  RQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRE 245
            R AI+AFLRGSSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTTPLKALSNQKFREFRE
Sbjct: 181  RLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGMRLFYTTPLKALSNQKFREFRE 240

Query: 246  TFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHY 305
            TFGD NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMASS  GLFHVDVIVLDEVHY
Sbjct: 241  TFGDDNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHY 300

Query: 306  LSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLN 365
            LSD+ RGTVWEEIVIYCPK+VQLICLSATVANPDELAGWIGQIHGKTELVTS++RPVPL 
Sbjct: 301  LSDMYRGTVWEEIVIYCPKKVQLICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLT 360

Query: 366  WHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEIS-DD 425
            WHFSTKTSLLPLLD+ G HMNR+LS+NYLQL+ASG K YKDDGSRRR+ +R  +E+S DD
Sbjct: 361  WHFSTKTSLLPLLDKTGKHMNRRLSVNYLQLNASGTKSYKDDGSRRRSSRRRASEMSYDD 420

Query: 426  RTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIE 485
             T ++SR+  LSKNDIN I RS VPQ+ DTLW LKS+DMLPA+WFIFSRKGCDAAVQY++
Sbjct: 421  STGNMSRRP-LSKNDINLIHRSQVPQITDTLWHLKSRDMLPAIWFIFSRKGCDAAVQYVQ 480

Query: 486  GKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 545
              NLLDD E SEV+LAL++FRI++PDA+RE+AVKGLLQGVAAHHAGCLPLWKSFIEELFQ
Sbjct: 481  DNNLLDDCEMSEVQLALKRFRIKYPDAIRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 540

Query: 546  RGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKK 605
            RGLVKVVFATETLAAGINMPARTA+IASLSKRS+SGRTQL+ NEL QMAGRAGRRGID++
Sbjct: 541  RGLVKVVFATETLAAGINMPARTAIIASLSKRSDSGRTQLSPNELFQMAGRAGRRGIDER 600

Query: 606  GHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTS-EMDGTKAF 665
            GHVVL+Q+PYEGAE CCK++FAG+EPLVSQFTASYGMVLNLLAGAK T  S E D T+A 
Sbjct: 601  GHVVLVQSPYEGAEACCKIVFAGLEPLVSQFTASYGMVLNLLAGAKFTSRSNESDDTEAS 660

Query: 666  QAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLM 725
            Q+GRTLEEARKLVEQSFGNYVGSNVM+AAKEEL +I+KEIE+L LEI+D+AID+K R+L+
Sbjct: 661  QSGRTLEEARKLVEQSFGNYVGSNVMLAAKEELTRIQKEIEILTLEISDDAIDRKSRKLL 720

Query: 726  SDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSE 785
            S  AY E+ +LQE LR++KR RTELR+ ME Q++ +L+ +L+   DG LPFLCLQYKDSE
Sbjct: 721  SGPAYKEIADLQEELRAEKRLRTELRRRMESQKLSSLRPMLEEFEDGHLPFLCLQYKDSE 780

Query: 786  GVQHSIPAVLFGNMDS---SKLINMFPADN--SLSGAEPNLGKNLDPGAESSYYVALGSD 845
            GVQHSIPAV  G +DS   SKL +M  AD+  +L+        NL    E SYYVALGSD
Sbjct: 781  GVQHSIPAVYLGKVDSFSRSKLKHMVSADDAFALNAVTSEFESNL--VFEPSYYVALGSD 840

Query: 846  NSWYLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCM 905
            NSWYLFTEKWIKT+YKTGFPNVAL  GD LPREIM  LLDK  +KWEKLA+SELG    M
Sbjct: 841  NSWYLFTEKWIKTIYKTGFPNVALALGDALPREIMSMLLDKTELKWEKLAESELGGFWNM 900

Query: 906  EGSLETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFR 965
            EGSLETWSWSLNVPVLNSLSE+DELL  SE+Y  ++ RYK+QRNKVSR KK+ISRT+GFR
Sbjct: 901  EGSLETWSWSLNVPVLNSLSEHDELLHKSEAYHNAVERYKDQRNKVSRLKKKISRTQGFR 960

Query: 966  EYKKILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHV 1025
            EYKKI+DMA   E+KI++LK R +RL+NRI+QIEPSGWKEFLQISNVIHE RALDIN+HV
Sbjct: 961  EYKKIVDMAKFTEEKIKRLKGRSRRLTNRIEQIEPSGWKEFLQISNVIHETRALDINTHV 1020

Query: 1026 MFPLGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIF 1085
            MFPLG TAAAIRGENELW+A+VLRNK L+ LKP ELA VCASLVSEGIKIRP ++N+YI+
Sbjct: 1021 MFPLGVTAAAIRGENELWLAMVLRNKILIDLKPPELAAVCASLVSEGIKIRPWKNNSYIY 1080

Query: 1086 EPSRTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCA 1145
            EPS TV+++VNFL+EQR+S L LQ+KHGV+ PC LD+QFSGMVEAW SGLTW+EIMMDCA
Sbjct: 1081 EPSSTVVDVVNFLDEQRSSFLQLQEKHGVNKPCYLDTQFSGMVEAWVSGLTWKEIMMDCA 1140

Query: 1146 MDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            MDEGDLARLLRRTIDLL QIPKLPDIDP LQ NA TAS++M+R PISELAG
Sbjct: 1141 MDEGDLARLLRRTIDLLVQIPKLPDIDPLLQSNAKTASNIMDRPPISELAG 1178

BLAST of Cp4.1LG11g07540 vs. TrEMBL
Match: A0A061E5K5_THECC (DEAD/DEAH box helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_010129 PE=4 SV=1)

HSP 1 Score: 1600.5 bits (4143), Expect = 0.0e+00
Identity = 860/1186 (72.51%), Postives = 988/1186 (83.31%), Query Frame = 1

Query: 6    INVFSIISPQHLWPPLSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPFRPSVRS 65
            +N  SI+S   L+P   +   S       S P     FCR  P  I SP  + FR S +S
Sbjct: 1    MNTLSILSLPSLFPTTKHCQISHCHSLAQSFP-----FCR--PKSILSP--LSFRLSFKS 60

Query: 66   PRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGE----LEQRYDEV 125
             RS FS +PQLSD DE+ ++DED     DDDDDD  AA+EYD D  GE    ++Q  DEV
Sbjct: 61   RRSPFSSEPQLSDADEELEDDED-----DDDDDDYEAADEYD-DVSGEVSDDIQQSSDEV 120

Query: 126  ELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAF 185
            E+S++    S   +E   QRVE+L   VREFG+ ++DVD LA +Y+FRIDKFQR AIEAF
Sbjct: 121  EISVD---FSNRRKESTWQRVERLCNLVREFGQEMIDVDALADIYDFRIDKFQRIAIEAF 180

Query: 186  LRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNV 245
            LRGSSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTTPLKALSNQKFR+FRETFGD+NV
Sbjct: 181  LRGSSVVVSAPTSSGKTLIAEAAAVATVARGSRLFYTTPLKALSNQKFRQFRETFGDNNV 240

Query: 246  GLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRG 305
            GLLTGDSAVNKDA VL++TTEILRNMLY SVGMASS SG FHVDVIVLDEVHYLSDISRG
Sbjct: 241  GLLTGDSAVNKDAQVLVLTTEILRNMLYNSVGMASSGSGFFHVDVIVLDEVHYLSDISRG 300

Query: 306  TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFSTKT 365
            TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+ RPVPL WHFSTKT
Sbjct: 301  TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSWRPVPLTWHFSTKT 360

Query: 366  SLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLSRQ 425
            SLLPLL+EKGTHMNRKLSLNYLQL ASG K Y+DDGSRRRN ++ G   S D   S+S Q
Sbjct: 361  SLLPLLNEKGTHMNRKLSLNYLQLSASGVKSYRDDGSRRRNSRQRGRNGSLDGIVSMSEQ 420

Query: 426  ATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDY 485
              LSKND N I RS VPQVVDTLW LK+KDMLPA+WFIF+R+GCDAAVQY+E  +LLDD 
Sbjct: 421  P-LSKNDKNMICRSQVPQVVDTLWHLKAKDMLPAIWFIFNRRGCDAAVQYVEDCSLLDDC 480

Query: 486  ERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF 545
            E SEVELAL+KFR+Q+PDAVRE+AVKGL++GVAAHHAGCLPLWKSF+EELFQRGLVKVVF
Sbjct: 481  EMSEVELALKKFRLQYPDAVRETAVKGLIRGVAAHHAGCLPLWKSFVEELFQRGLVKVVF 540

Query: 546  ATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQT 605
            ATETLAAGINMPARTAVI+SLSKR++SGR QL+ NELLQMAGRAGRRGID+ GHVV++QT
Sbjct: 541  ATETLAAGINMPARTAVISSLSKRTSSGRIQLSPNELLQMAGRAGRRGIDEWGHVVIVQT 600

Query: 606  PYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTS-EMDGTKAFQAGRTLEE 665
            PYEGAEECCKLLF+G+EPLVSQFTASYGMVLNLL GAKVT  S E D   A Q  RTLEE
Sbjct: 601  PYEGAEECCKLLFSGVEPLVSQFTASYGMVLNLLGGAKVTRRSNESDELNALQGRRTLEE 660

Query: 666  ARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNEL 725
            ARKLVEQSFGNY+GSNVM+AAKEEL KIEKEIE L  EI+D+AID+K R+L+S+VAY E+
Sbjct: 661  ARKLVEQSFGNYLGSNVMLAAKEELAKIEKEIEALTSEISDDAIDRKSRKLLSEVAYKEI 720

Query: 726  VELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPA 785
             +LQE LR +KR RTELR+ MEL+R  ALK LL+   +G LPF+CLQY+DSEGVQ+ +PA
Sbjct: 721  ADLQEELRQEKRLRTELRRRMELKRFSALKPLLKEFENGHLPFICLQYRDSEGVQNLVPA 780

Query: 786  VLFG---NMDSSKLINMFPADNSLS----GAEPNLGK-NLDPGAESSYYVALGSDNSWYL 845
            V  G   ++D SKL  M  AD+S +    G E N G+ +     E +YYVALGSDNSWYL
Sbjct: 781  VYLGKVESLDGSKLKKMVSADDSFAMGSVGTELNAGEPDSHQDVEPTYYVALGSDNSWYL 840

Query: 846  FTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLE 905
            FTEKWIKTVY+TGFP+VALT+GD LPREIMRTLLDKE M+WEK+ADSELG L   EGSLE
Sbjct: 841  FTEKWIKTVYRTGFPDVALTQGDALPREIMRTLLDKEEMQWEKVADSELGGLWYTEGSLE 900

Query: 906  TWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKI 965
            TWSWSLNVPVL+SLSE+DE+L MS+ Y ES+  YKEQRNKV+R KK+I+RT+GFREYKKI
Sbjct: 901  TWSWSLNVPVLSSLSESDEVLHMSQEYDESVEHYKEQRNKVARLKKKIARTEGFREYKKI 960

Query: 966  LDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLG 1025
            LDM    E+KI++LKAR   L+NR+++IEPSGWKEF+QISNVIHE RALDIN+HV+FPLG
Sbjct: 961  LDMGRFTEEKIKRLKARSNHLTNRMERIEPSGWKEFVQISNVIHETRALDINTHVIFPLG 1020

Query: 1026 ETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRT 1085
            ETAAAIRGENELW+A+VLRNK L++LKP +LA VCASLVSEGIK+R  ++NNYI+EPS T
Sbjct: 1021 ETAAAIRGENELWLAMVLRNKILLELKPAQLAAVCASLVSEGIKVRVWKNNNYIYEPSST 1080

Query: 1086 VINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGD 1145
            V+N+++ L+EQR S + L++KH V+IPC LD QFSGMVEAWASGL+WRE+MMDCAMDEGD
Sbjct: 1081 VLNVISLLDEQRYSFMQLEEKHAVEIPCCLDGQFSGMVEAWASGLSWRELMMDCAMDEGD 1140

Query: 1146 LARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            LARLLRRTIDLLAQIPKLPDIDP LQ+NA+ ASDVM+R PISELAG
Sbjct: 1141 LARLLRRTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISELAG 1167

BLAST of Cp4.1LG11g07540 vs. TrEMBL
Match: D7TNJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01000 PE=4 SV=1)

HSP 1 Score: 1585.9 bits (4105), Expect = 0.0e+00
Identity = 812/1053 (77.11%), Postives = 927/1053 (88.03%), Query Frame = 1

Query: 135  EEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTS 194
            +EFK QRVEKL  EVREFGE ++DV+ELAS+Y+FRIDKFQR AI+AFLRGSSVVVSAPTS
Sbjct: 12   DEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTS 71

Query: 195  SGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDA 254
            SGKTLIAEAAAVATV+R RRLFYTTPLKALSNQKFREFRETFGD+NVGLLTGDSAVNKDA
Sbjct: 72   SGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVNKDA 131

Query: 255  LVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKE 314
             VLIMTTEILRNMLYQSVGM SS SGLFHVDVIVLDEVHYLSDI RGTVWEEIVIYCPKE
Sbjct: 132  QVLIMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYRGTVWEEIVIYCPKE 191

Query: 315  VQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFSTKTSLLPLLDEKGTHM 374
            VQLICLSATVANPDELAGWI QIHGKTELVTS+KRPVPL WHFSTKTSLLPLLDEKG  M
Sbjct: 192  VQLICLSATVANPDELAGWISQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKGKSM 251

Query: 375  NRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRR 434
            NRKLSL+YLQ +ASG   YKD+ SRRRN K+  +++S    +S+  Q++LSKNDIN+IRR
Sbjct: 252  NRKLSLSYLQNYASGDNSYKDERSRRRNLKKRESDMSYSSFASIHGQSSLSKNDINTIRR 311

Query: 435  SNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDYERSEVELALRKFR 494
            S VPQV+DTLW LK++DMLPA+WFIFSRKGCDA+VQY+E  NLLD+ E SEV+LAL++FR
Sbjct: 312  SQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFR 371

Query: 495  IQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPA 554
            +Q+PDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPA
Sbjct: 372  LQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPA 431

Query: 555  RTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLF 614
            RTAVI+SLSKR  SGR QL+SNELLQMAGRAGRRGID+ GH VL+QTPY+GAEECCKLLF
Sbjct: 432  RTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAVLVQTPYDGAEECCKLLF 491

Query: 615  AGIEPLVSQFTASYGMVLNLLAGAKVT-HTSEMDGTKAFQAGRTLEEARKLVEQSFGNYV 674
            AG+EPLVSQFTASYGMVLNLLAGAKVT   SE +  K  QAGRTLEEARKLVEQSFGNYV
Sbjct: 492  AGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYV 551

Query: 675  GSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNELVELQEGLRSDKRQ 734
            GSNVM+AAKEEL K+EKEIEVL+ E+TD+AID+K R+L+S++AYNE+  LQE LR++KR 
Sbjct: 552  GSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRL 611

Query: 735  RTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPAVLFGNMDS---SK 794
            RTELR+ MEL+R+ ALK LL+   +G LPF+CLQYKDSE VQH +PAV  G +DS   SK
Sbjct: 612  RTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSK 671

Query: 795  LINMFPADNSLSGAEPNLGKNLD-----PGAESSYYVALGSDNSWYLFTEKWIKTVYKTG 854
            + NM   ++  +        N+D     P  + SYYVALGSDNSWYLFTEKWIKTVY+TG
Sbjct: 672  VKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRTG 731

Query: 855  FPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLNVPVLNS 914
            FPNVAL +GD LPREIMR LLDK  ++WE+LA SELG L C+EGSLETWSWSLNVPVL+S
Sbjct: 732  FPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSS 791

Query: 915  LSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMANIIEDKIRQ 974
            LSE+DE+L+MS++Y E++  YKEQRNKVSR KK+I+RT+GF+EYKKI+DM+   E+KI++
Sbjct: 792  LSEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIKR 851

Query: 975  LKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIRGENELW 1034
            LKAR  RLS+RI+QIEPSGWKEFLQ+SNVIHE RALDIN+H++FPLGETAAAIRGENELW
Sbjct: 852  LKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENELW 911

Query: 1035 IAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNFLEEQRN 1094
            +A+VLR+K L+ LKP +LA VC SLVSEGIK+RP ++N+YI+E S TVIN+++ L+EQRN
Sbjct: 912  LAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQRN 971

Query: 1095 SLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLA 1154
            SLL LQ+KH V IPC LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID+LA
Sbjct: 972  SLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDILA 1031

Query: 1155 QIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            QIPKLPDIDP LQ NA TAS+VM+R PISELAG
Sbjct: 1032 QIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064

BLAST of Cp4.1LG11g07540 vs. TrEMBL
Match: V4TEM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030551mg PE=4 SV=1)

HSP 1 Score: 1573.1 bits (4072), Expect = 0.0e+00
Identity = 824/1142 (72.15%), Postives = 966/1142 (84.59%), Query Frame = 1

Query: 48   PLPIFSPFPVPFRPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYD 107
            P P+ S   + F+ S +SP+S F  + +L+D DE  DE +D+     DDDDD+ AA+EYD
Sbjct: 39   PKPLLSSNSIQFQASYKSPKSFFPTEHKLTDADEAGDEYDDDI----DDDDDEEAADEYD 98

Query: 108  IDAFGE----LEQRYDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELA 167
             D  GE    ++Q  DE E+S +++      EEFK QRVEKL  EV+EFG  ++DVDELA
Sbjct: 99   -DVSGEVSDGIQQSDDEFEVSSDSSPAPSWREEFKWQRVEKLCNEVKEFGNEMIDVDELA 158

Query: 168  SVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKA 227
            S+Y+FRIDKFQR +IEAF RGSSVVVSAPTSSGKTLIAEAAAVATVA++RRLFYTTPLKA
Sbjct: 159  SIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIAEAAAVATVAKQRRLFYTTPLKA 218

Query: 228  LSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFH 287
            LSNQKFREFRETFGD+NVGLLTGDSA+N++A +LIMTTEILRNMLYQSVGM SSESGLF 
Sbjct: 219  LSNQKFREFRETFGDNNVGLLTGDSAINREAQILIMTTEILRNMLYQSVGMVSSESGLFD 278

Query: 288  VDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTEL 347
            VDVIVLDEVHYLSDISRGTVWEEI+IYCPKEVQ+ICLSATVAN DELAGWIGQIHGKTEL
Sbjct: 279  VDVIVLDEVHYLSDISRGTVWEEIIIYCPKEVQIICLSATVANADELAGWIGQIHGKTEL 338

Query: 348  VTSTKRPVPLNWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNP 407
            +TS++RPVPL W+FSTKT+LLPLLDEKG HMNRKLSLNYLQL  S  K YKD GSRRRN 
Sbjct: 339  ITSSRRPVPLTWYFSTKTALLPLLDEKGKHMNRKLSLNYLQLSTSEVKPYKDGGSRRRNS 398

Query: 408  KRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRK 467
            ++H +  S++  +S   Q  LSKN IN+IRRS VPQV+DTLW L+S+DMLPA+WFIF+R+
Sbjct: 399  RKHTDMNSNNIVTSFG-QHQLSKNSINAIRRSQVPQVIDTLWHLRSRDMLPAIWFIFNRR 458

Query: 468  GCDAAVQYIEGKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPL 527
            GCDAA+QY+E  NLLD+ E SEVELAL++FRI +PDAVRE A+KGLL+GVAAHHAGCLP+
Sbjct: 459  GCDAAIQYLEDCNLLDECEMSEVELALKRFRILYPDAVREPAIKGLLKGVAAHHAGCLPI 518

Query: 528  WKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAG 587
            WKSFIEELFQRGLVKVVFATETLAAGINMPARTAV++SLSKR+ SGR QLTSNEL QMAG
Sbjct: 519  WKSFIEELFQRGLVKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAG 578

Query: 588  RAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHT 647
            RAGRRGID +GHVVL+QTPYEGAEECCKLLFAG+EPLVSQFTASYGMVLNLLAGAKV H 
Sbjct: 579  RAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVMHL 638

Query: 648  S-EMDGTKAFQAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDE 707
            S E D  KA QAGR+LEEARKLVEQSFGNYVGSNVM+AAK+EL KI+KEI+VL  EI+D+
Sbjct: 639  SNESDDMKALQAGRSLEEARKLVEQSFGNYVGSNVMLAAKDELCKIQKEIDVLTSEISDD 698

Query: 708  AIDKKCRRLMSDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLP 767
            AID+K RRL+S+ AY E+  LQE L+++KR RTELR+ MEL+R  ALK +L++  +G LP
Sbjct: 699  AIDRKSRRLLSEAAYKEMANLQEELKAEKRFRTELRRRMELKRFSALKDILKDFENGHLP 758

Query: 768  FLCLQYKDSEGVQHSIPAVLFG---NMDSSKLINMFPADNS--LSGAEPNLGKNLDP-GA 827
            FLCLQYKDSEGV+HS+PAV  G   ++DSSKL NM   ++S  L+    + G + D    
Sbjct: 759  FLCLQYKDSEGVEHSVPAVYLGKFDSLDSSKLKNMASINDSFALNRLAQSNGDDYDTQDV 818

Query: 828  ESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKL 887
            + SYYVALGSDN+WY FTEKWIKTVY+ GFPNVAL +GD LPRE M  LLDK  M WEKL
Sbjct: 819  KPSYYVALGSDNTWYTFTEKWIKTVYRIGFPNVALAQGDALPRETMSLLLDKGEMLWEKL 878

Query: 888  ADSELGSLSCMEGSLETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRF 947
            ADSE G L CMEGSLETWSWSLNVPVL+SLSE+DE+L MS  Y +++  YK+QR KV+R 
Sbjct: 879  ADSEFGGLWCMEGSLETWSWSLNVPVLSSLSESDEVLHMSFEYHDAVENYKKQRTKVARL 938

Query: 948  KKRISRTKGFREYKKILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIH 1007
            KK I+RT+GF+EYKKI+D     E+KI++LKAR KRL+ RI+QIEPSGWKEFL+ISNVIH
Sbjct: 939  KKTIARTEGFKEYKKIVDTVKFTEEKIKRLKARSKRLTKRIEQIEPSGWKEFLRISNVIH 998

Query: 1008 EIRALDINSHVMFPLGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIK 1067
            E RALDIN+ V+FPLGETAAAIRGENELW+A+VLRNK L+ LKP +LA VCASLVSEGIK
Sbjct: 999  ETRALDINTQVIFPLGETAAAIRGENELWLAMVLRNKILLDLKPAQLAAVCASLVSEGIK 1058

Query: 1068 IRPGRDNNYIFEPSRTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASG 1127
            +R  ++N+YI+EPS TVIN++N L+E R+S L+LQ+KHGV+IPC LDSQFSGMVEAWASG
Sbjct: 1059 VRLWKNNSYIYEPSTTVINVINVLDEHRSSFLELQEKHGVEIPCCLDSQFSGMVEAWASG 1118

Query: 1128 LTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISEL 1179
            LTWRE+MMDCA+D+GDLARLLRRTIDLLAQIPKLPD+D  LQ+NA  AS+VM+R PISEL
Sbjct: 1119 LTWREMMMDCALDDGDLARLLRRTIDLLAQIPKLPDVDQRLQKNAVDASNVMDRPPISEL 1174

BLAST of Cp4.1LG11g07540 vs. TAIR10
Match: AT1G70070.1 (AT1G70070.1 DEAD/DEAH box helicase, putative)

HSP 1 Score: 1494.2 bits (3867), Expect = 0.0e+00
Identity = 789/1128 (69.95%), Postives = 943/1128 (83.60%), Query Frame = 1

Query: 71   SEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD-----EVELSM 130
            S  P  S + E+ED++E+E+EDEDDDD+   AA+EYD +   E+    D     E E S+
Sbjct: 54   SLSPSQSQLYEEEDDEEEEEEDEDDDDE---AADEYD-NISDEIRNSDDDDDDEETEFSV 113

Query: 131  EA-TEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAFLRG 190
            +  TE +    EF+ QRVEKL   VR+FG  ++D+DEL S+Y+FRIDKFQR AIEAFLRG
Sbjct: 114  DLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEAFLRG 173

Query: 191  SSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLL 250
            SSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD NVGLL
Sbjct: 174  SSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDNVGLL 233

Query: 251  TGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRGTVW 310
            TGDSA+NKDA ++IMTTEILRNMLYQSVGMASS +GLFHVD IVLDEVHYLSDISRGTVW
Sbjct: 234  TGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRGTVW 293

Query: 311  EEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFSTKTSLL 370
            EEIVIYCPKEVQLICLSATVANPDELAGWIG+IHGKTELVTST+RPVPL W+FSTK SLL
Sbjct: 294  EEIVIYCPKEVQLICLSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTKHSLL 353

Query: 371  PLLDEKGTHMNRKLSLNYLQLHASGAKLYKDD-GSRRRNPKRHGNEISDDRTSSLSRQAT 430
            PLLDEKG ++NRKLSLNYLQL AS A+   DD G R+R  K+ G + S +   +++    
Sbjct: 354  PLLDEKGINVNRKLSLNYLQLSASEARFRDDDDGYRKRRSKKRGGDTSYNNLVNVT-DYP 413

Query: 431  LSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDYER 490
            LSKN+IN IRRS VPQ+ DTLW L+ K+MLPA+WFIF+R+GCDAAVQY+E   LLDD E+
Sbjct: 414  LSKNEINKIRRSQVPQISDTLWHLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEK 473

Query: 491  SEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFAT 550
            SEVELAL+KFR+ +PDAVRESA KGLL+G+AAHHAGCLPLWKSFIEELFQRGLVKVVFAT
Sbjct: 474  SEVELALKKFRVLYPDAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFAT 533

Query: 551  ETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPY 610
            ETLAAGINMPARTAVI+SLSK++ + R +L  NEL QMAGRAGRRGID+KG+ VL+QT +
Sbjct: 534  ETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLVQTAF 593

Query: 611  EGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSE-MDGTKAFQAGRTLEEAR 670
            EGAEECCKL+FAG++PLVSQFTASYGMVLNL+AG+KVT  S   +  K  QAGR+LEEA+
Sbjct: 594  EGAEECCKLVFAGVKPLVSQFTASYGMVLNLVAGSKVTRKSSGTEAGKVLQAGRSLEEAK 653

Query: 671  KLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNELVE 730
            KLVE+SFGNYV SNV +AAK+EL +I+ +IE+L+ EI+DEAIDKK R+L+S   Y E+  
Sbjct: 654  KLVEKSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYKEITV 713

Query: 731  LQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPAVL 790
            L+E LR +KR+R E R+ MEL+R  ALK LL+ + +G LPF+CL++KDSEG + S+PAV 
Sbjct: 714  LKEELREEKRKRAEQRRRMELERFLALKPLLKGMEEGNLPFICLEFKDSEGREQSVPAVY 773

Query: 791  FGNMDS---SKLINMFPADNS---------LSGAEPNLGKNLDPGAESSYYVALGSDNSW 850
             G++DS   SKL  M   D S         L+  EP  GK   P  + SYYVALGSDNSW
Sbjct: 774  LGHIDSFQGSKLQKMMSLDESFALNLIEDELAADEP--GK---PNVKPSYYVALGSDNSW 833

Query: 851  YLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGS 910
            YLFTEKW++TVY+TGFPN+AL  GD LPREIM+ LLDK  M+W+KLA+SELGSL  +EGS
Sbjct: 834  YLFTEKWVRTVYRTGFPNIALALGDALPREIMKNLLDKADMQWDKLAESELGSLWRLEGS 893

Query: 911  LETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYK 970
            LETWSWSLNVPVL+SLS+ DE+L MSE Y  +  +YKEQR+K+SR KK++SR++GFREYK
Sbjct: 894  LETWSWSLNVPVLSSLSDEDEVLHMSEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYK 953

Query: 971  KILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFP 1030
            KIL+ AN+  +K+++LKAR +RL NR++QIEPSGWK+F++ISNVIHE RALDIN+H++FP
Sbjct: 954  KILENANLTVEKMKRLKARSRRLINRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFP 1013

Query: 1031 LGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPS 1090
            LGETAAAIRGENELW+A+VLRNK LV LKP +LAGVCASLVSEGIK+RP RDNNYI+EPS
Sbjct: 1014 LGETAAAIRGENELWLAMVLRNKALVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPS 1073

Query: 1091 RTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDE 1150
             TV++MVNFLE+QR+SL+ LQ+KH V IPC LD QFSGMVEAWASGL+W+E+MM+CAMDE
Sbjct: 1074 DTVVDMVNFLEDQRSSLIKLQEKHEVMIPCCLDVQFSGMVEAWASGLSWKEMMMECAMDE 1133

Query: 1151 GDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            GDLARLLRRTIDLLAQIPKLPDIDP LQR+A+ A+D+M+R PISELAG
Sbjct: 1134 GDLARLLRRTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 1171

BLAST of Cp4.1LG11g07540 vs. TAIR10
Match: AT3G46960.1 (AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 269.6 bits (688), Expect = 8.9e-72
Identity = 188/538 (34.94%), Postives = 282/538 (52.42%), Query Frame = 1

Query: 159 VDELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYT 218
           V ++A  + F +D FQ++AI    +G SV V+A TS+GKT++AE A         R  YT
Sbjct: 350 VPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 409

Query: 219 TPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSE 278
            P+K +SNQK+R+F    G  +VGLLTGD ++  +A  LIMTTEILR+MLY+   +    
Sbjct: 410 APIKTISNQKYRDF---CGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRD- 469

Query: 279 SGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIH 338
                ++ ++ DEVHY++D+ RG VWEE++I  P+ +  + LSATV N  E A WIG+  
Sbjct: 470 -----IEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTK 529

Query: 339 GKTELVT-STKRPVPLNWHFSTKTSLLPLLDEK---------GTHMNRKLSLNYLQL--- 398
            K   VT +TKRPVPL         L  + + +              +K + N + +   
Sbjct: 530 QKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPK 589

Query: 399 -------HASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVP 458
                  H  G+K  K +   R    +H + + D   SS S     S+N+  + RRS   
Sbjct: 590 QQMGSSAHQDGSKSQKHEAHSRGKQNKHSS-VKDVGKSSYSGN---SQNN-GAFRRSAAS 649

Query: 459 QVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDYERSEVEL-------ALR 518
             +  + +L    +LP V F FS+  CD     + G +L    E+SE+ +        L+
Sbjct: 650 NWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLK 709

Query: 519 KFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGIN 578
                 P  +R  ++  L +G+  HHAG LP+ K  +E LF RG++KV+F+TET A G+N
Sbjct: 710 GSDRNLPQVLRLQSL--LHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 769

Query: 579 MPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLL---QTPYEGAEE 638
            PART V  +L K       QL   E  QMAGRAGRRG+DK G VV++   + P E   +
Sbjct: 770 APARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDE--SD 829

Query: 639 CCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKA-FQAGRTLEEARKLV 666
             +++      L SQF  +Y M+L+LL   ++     +  + A F A + L E ++L+
Sbjct: 830 LRRVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLL 869

BLAST of Cp4.1LG11g07540 vs. TAIR10
Match: AT2G06990.1 (AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 251.5 bits (641), Expect = 2.5e-66
Identity = 181/578 (31.31%), Postives = 286/578 (49.48%), Query Frame = 1

Query: 161 ELASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTP 220
           ++A  Y F++D FQ  ++    R  S++VSA TS+GKT +AE A       K+R+ YT+P
Sbjct: 73  DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132

Query: 221 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESG 280
           LKALSNQK+RE +  F D  VGL+TGD  ++ +A  L+MTTEILR MLY+          
Sbjct: 133 LKALSNQKYRELQHEFKD--VGLMTGDVTLSPNASCLVMTTEILRAMLYR------GSEV 192

Query: 281 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK 340
           L  V  ++ DE+HY+ D  RG VWEE +I+ P  ++++ LSAT++N  E A WI  +H +
Sbjct: 193 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQ 252

Query: 341 -TELVTSTKRPVPL-NWHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGS 400
              +V +  RP PL ++ F      L L+ +           +++++  +  K   +DG 
Sbjct: 253 PCHVVYTDFRPTPLQHYAFPMGGGGLYLVVDDNEQFRED---SFVKMQDTFPKPKSNDGK 312

Query: 401 RRRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWF 460
           +  N K  G                           S+V ++V  + + K +   P + F
Sbjct: 313 KSANGKSGGRGAKGG----------------GGPGDSDVYKIVKMIMERKFE---PVIIF 372

Query: 461 IFSRKGCDAAVQYIEGKNLLDDYERSEVELALRKFRIQFPDAVR-----ESAVKGLLQGV 520
            FSR+ C+     +   +   D E+  VE           +  R     E  +  L +G+
Sbjct: 373 SFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGI 432

Query: 521 AAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQL 580
           A HH+G LP+ K  +E LFQ GLVK +FATET A G+NMPA+T V  ++ K        +
Sbjct: 433 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 492

Query: 581 TSNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLN 640
            S E +QM+GRAGRRG D++G  +++            ++     PL+S F  SY  +LN
Sbjct: 493 GSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILN 552

Query: 641 LLAGAKVTHTSEMDGTKAFQAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIE 700
           LL+ A+   T+E                  ++  SF  +     +     ++ K+E+E  
Sbjct: 553 LLSRAEGQFTAE-----------------HVIRHSFHQFQHEKALPDIGNKVSKLEEEAA 601

Query: 701 VLNLEITDEAIDKKCRRLMSDVAYNELVELQEGLRSDK 732
           +LN   + EA   +   L  D+A +E   + E +R ++
Sbjct: 613 ILN--ASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPER 601

BLAST of Cp4.1LG11g07540 vs. TAIR10
Match: AT1G59760.1 (AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 249.6 bits (636), Expect = 9.6e-66
Identity = 169/481 (35.14%), Postives = 253/481 (52.60%), Query Frame = 1

Query: 163 ASVYNFRIDKFQRQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 222
           A  + F +D FQ +AI+    G SV+VSA TS+GKT++A  A   ++   +R+ YT+P+K
Sbjct: 61  AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIK 120

Query: 223 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLF 282
           ALSNQK+R+F+E F D  VGL+TGD  ++ +A  L+MTTEILR+M Y+   +      + 
Sbjct: 121 ALSNQKYRDFKEEFSD--VGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEI------MR 180

Query: 283 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKT- 342
            V  I+ DEVHY+ D  RG VWEE ++  PK  + + LSATV N  E A W+ ++H +  
Sbjct: 181 EVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPC 240

Query: 343 ELVTSTKRPVPLNWHF--STKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSR 402
            +V +  RP PL  +   +    L  ++DEK                   +K ++D   +
Sbjct: 241 HIVYTDYRPTPLQHYVFPAGGNGLYLVVDEK-------------------SKFHEDSFQK 300

Query: 403 RRNPKRHGNEISDDRTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFI 462
             N     NE SD +  +   Q  L    +     S++ ++V  + Q   +   P + F 
Sbjct: 301 SLNALVPTNE-SDKKRDNGKFQKGLVIGKLGE--ESDIFKLVKMIIQ---RQYDPVILFS 360

Query: 463 FSRKGCDAAVQYIEGKNLLDDYERSEVELALRKFRIQFPDAVRE-----SAVKGLLQGVA 522
           FS+K C+A    +    L  D E+  VE           D  ++     + +  L +G+ 
Sbjct: 361 FSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILKRGIG 420

Query: 523 AHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLT 582
            HH+G LP+ K  IE LFQ GL+K +FATET + G+NMPA+T V  ++ K        L+
Sbjct: 421 VHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLS 480

Query: 583 SNELLQMAGRAGRRGIDKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNL 636
           S E +QM+GRAGRRGIDK+G  +L+            +L    + L S F  SY M+LN 
Sbjct: 481 SGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQ 508

BLAST of Cp4.1LG11g07540 vs. TAIR10
Match: AT4G32700.2 (AT4G32700.2 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-16
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 1

Query: 458 FIFSRKGCDAAVQYIEG--KNLL-----DDYERSEVELALRKFRIQFPDAVRESAVKGLL 517
           F  SRKGC++  ++I    KN+      ++ E  ++  A+   R + P  V     + L 
Sbjct: 775 FCSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALR-RSPSGVDPVLEETLP 834

Query: 518 QGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGR 577
            GVA HHAG     +  +E  +++GLV+V+ AT TLAAG+N+PAR  +     ++   GR
Sbjct: 835 SGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIF----RQPMIGR 894

Query: 578 TQLTSNELLQMAGRAGRRGIDKKGHVVLLQTPYE 605
             +      QM+GRAGR GID KG  VL+  P E
Sbjct: 895 DFIDGTRYKQMSGRAGRTGIDTKGDSVLICKPGE 923

BLAST of Cp4.1LG11g07540 vs. NCBI nr
Match: gi|659131497|ref|XP_008465717.1| (PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Cucumis melo])

HSP 1 Score: 2026.1 bits (5248), Expect = 0.0e+00
Identity = 1057/1179 (89.65%), Postives = 1105/1179 (93.72%), Query Frame = 1

Query: 1    MPSPAINVFSIISPQHLWPP-LSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 60
            M  PAI+V+SIIS QHL PP LSYPFPS +CP  SSP IQA+RFCR KPL  +S +PV F
Sbjct: 1    MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60

Query: 61   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD 120
            RPS +SPRSIFSEK QLSDVDEDEDEDEDED      D+DDVAAEEYD DA GE EQ YD
Sbjct: 61   RPSFQSPRSIFSEKSQLSDVDEDEDEDEDED------DEDDVAAEEYDSDALGEFEQSYD 120

Query: 121  EVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIE 180
            EVELSM+A+EIS APEEFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR AI+
Sbjct: 121  EVELSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQ 180

Query: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240
            AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS
Sbjct: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240

Query: 241  NVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDIS 300
            NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSDIS
Sbjct: 241  NVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDIS 300

Query: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFST 360
            RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPL WHFST
Sbjct: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFST 360

Query: 361  KTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLS 420
            KTSLLPLLDEKGT MNRKLSLNYLQLHASGAKLYKDDGSRR  PKR GNEIS D   S+S
Sbjct: 361  KTSLLPLLDEKGTRMNRKLSLNYLQLHASGAKLYKDDGSRR-TPKRRGNEISYDNIGSMS 420

Query: 421  RQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLD 480
            RQATLSKNDINSIRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQY++  NLLD
Sbjct: 421  RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYVDSSNLLD 480

Query: 481  DYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540
            D ERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 481  DCERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540

Query: 541  VFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLL 600
            VFATETLAAGINMPARTAVIASLSKRSN+GRTQL+SNELLQMAGRAGRRGIDK GHVVLL
Sbjct: 541  VFATETLAAGINMPARTAVIASLSKRSNNGRTQLSSNELLQMAGRAGRRGIDKXGHVVLL 600

Query: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLE 660
            QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TK FQA RTLE
Sbjct: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKTFQAWRTLE 660

Query: 661  EARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNE 720
            EARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+ +SDVAYNE
Sbjct: 661  EARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDVAYNE 720

Query: 721  LVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIP 780
            + ELQE LRS+KR RTELRKEME QRI AL SLL+NLGDG LPFLCLQYKDSEGVQHSIP
Sbjct: 721  IAELQEELRSEKRHRTELRKEMESQRIFALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIP 780

Query: 781  AVLFGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSWYLFTEKWIK 840
             VL GNMDSSKL NMFPADNSLSGAE NL   L+PG+ESSYYVALGSDNSWYLFTEKWIK
Sbjct: 781  TVLLGNMDSSKLGNMFPADNSLSGAESNLDITLEPGSESSYYVALGSDNSWYLFTEKWIK 840

Query: 841  TVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLN 900
            TVYKTGFPNVALTKGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGSLETWSWSLN
Sbjct: 841  TVYKTGFPNVALTKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLN 900

Query: 901  VPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMANII 960
            VPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRISRT+GFREYKKILDMAN++
Sbjct: 901  VPVLNSLSENDELLQMSQSYMESLERYKVQRNKVARLKKRISRTEGFREYKKILDMANLV 960

Query: 961  EDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIR 1020
            EDKIRQLK RYKRLSNRI+QIEPSGWKEFLQISNVIHEIRALDIN+HVMFPLGETAAAIR
Sbjct: 961  EDKIRQLKTRYKRLSNRIEQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIR 1020

Query: 1021 GENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNF 1080
            GENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPSRTVINM+NF
Sbjct: 1021 GENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINF 1080

Query: 1081 LEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR 1140
            LEEQRNSL DLQ+KHGV+I C LDSQFSGMVEAWASGLTWRE+MMDCAMDEGDLARLLRR
Sbjct: 1081 LEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLARLLRR 1140

Query: 1141 TIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            TIDLLAQIPKLPD+DPSLQ NASTASDVMNR PISELAG
Sbjct: 1141 TIDLLAQIPKLPDVDPSLQSNASTASDVMNRPPISELAG 1172

BLAST of Cp4.1LG11g07540 vs. NCBI nr
Match: gi|778702993|ref|XP_011655295.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 2001.5 bits (5184), Expect = 0.0e+00
Identity = 1048/1179 (88.89%), Postives = 1094/1179 (92.79%), Query Frame = 1

Query: 1    MPSPAINVFSIISPQHLWPP-LSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 60
            M  PAINV+SIIS QHL PP LSYPFPS L P  S     A+RFC  KPL  +S  PVPF
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD 120
            RPS  SPRSIFSEK QLSDVDEDEDEDEDED      D+DDVAAEEYD DA G  EQ YD
Sbjct: 61   RPSFHSPRSIFSEKSQLSDVDEDEDEDEDED------DEDDVAAEEYDSDALGGFEQSYD 120

Query: 121  EVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIE 180
            EVELSM+ +EIS A +EFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR A++
Sbjct: 121  EVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQ 180

Query: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240
            AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS
Sbjct: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240

Query: 241  NVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDIS 300
            NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSDIS
Sbjct: 241  NVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDIS 300

Query: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFST 360
            RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPL WHFST
Sbjct: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFST 360

Query: 361  KTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLS 420
            KTSLLPLLDEKG  MNRKLSLNYLQL+ASG K  KDDGSRRR PKR GNEIS D   S+S
Sbjct: 361  KTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMS 420

Query: 421  RQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLD 480
            RQATLSKNDINSIRRSNVPQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQYI+  NLLD
Sbjct: 421  RQATLSKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLD 480

Query: 481  DYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540
            D ERSEVELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV
Sbjct: 481  DCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKV 540

Query: 541  VFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLL 600
            VFATETLAAGINMPARTAVIASLSKRSN+GRT L+ NELLQMAGRAGRRGIDKKGHVVLL
Sbjct: 541  VFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLL 600

Query: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLE 660
            QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TKAFQA RTLE
Sbjct: 601  QTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETKAFQAWRTLE 660

Query: 661  EARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLMSDVAYNE 720
            EARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+ +SD+AYNE
Sbjct: 661  EARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNE 720

Query: 721  LVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIP 780
            + ELQE LR +KR RTELRKEME QRICAL SLL+NLGDG LPFLCLQYKDSEGVQHSIP
Sbjct: 721  IAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIP 780

Query: 781  AVLFGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSWYLFTEKWIK 840
             VL GNMDSSKL NMFPAD+SLSGAE NLG  L+PGAESSYYVALGSDNSWYLFTEKWIK
Sbjct: 781  TVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIK 840

Query: 841  TVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLN 900
            TVYKTGFPNVAL+KGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGSLETWSWSLN
Sbjct: 841  TVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLN 900

Query: 901  VPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYKKILDMANII 960
            VPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRIS+T+GFREYKKILDMAN+I
Sbjct: 901  VPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYKKILDMANLI 960

Query: 961  EDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIR 1020
            EDKIRQLK RYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDIN+HVMFPLGETAAAIR
Sbjct: 961  EDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFPLGETAAAIR 1020

Query: 1021 GENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNF 1080
            GENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPSRTVINM+NF
Sbjct: 1021 GENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPSRTVINMINF 1080

Query: 1081 LEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR 1140
            LEEQRNSL DLQ+KHGV+I C LDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR
Sbjct: 1081 LEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRR 1140

Query: 1141 TIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            TIDLLAQIPKLPDIDPSLQRNASTASDVMNR PISELAG
Sbjct: 1141 TIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1168

BLAST of Cp4.1LG11g07540 vs. NCBI nr
Match: gi|778702990|ref|XP_011655294.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 1993.8 bits (5164), Expect = 0.0e+00
Identity = 1048/1188 (88.22%), Postives = 1094/1188 (92.09%), Query Frame = 1

Query: 1    MPSPAINVFSIISPQHLWPP-LSYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 60
            M  PAINV+SIIS QHL PP LSYPFPS L P  S     A+RFC  KPL  +S  PVPF
Sbjct: 1    MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGELEQRYD 120
            RPS  SPRSIFSEK QLSDVDEDEDEDEDED      D+DDVAAEEYD DA G  EQ YD
Sbjct: 61   RPSFHSPRSIFSEKSQLSDVDEDEDEDEDED------DEDDVAAEEYDSDALGGFEQSYD 120

Query: 121  EVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIE 180
            EVELSM+ +EIS A +EFK QRVEKLLGEVREFGEGI+DVDELASVYNFRIDKFQR A++
Sbjct: 121  EVELSMDTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQ 180

Query: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240
            AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS
Sbjct: 181  AFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDS 240

Query: 241  NVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDIS 300
            NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S SGLFHVDVIVLDEVHYLSDIS
Sbjct: 241  NVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDIS 300

Query: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLNWHFST 360
            RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTS+KRPVPL WHFST
Sbjct: 301  RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFST 360

Query: 361  KTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISDDRTSSLS 420
            KTSLLPLLDEKG  MNRKLSLNYLQL+ASG K  KDDGSRRR PKR GNEIS D   S+S
Sbjct: 361  KTSLLPLLDEKGARMNRKLSLNYLQLNASGDKFSKDDGSRRRTPKRRGNEISYDNIGSMS 420

Query: 421  RQATLSKNDINSIRRSNV---------PQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQ 480
            RQATLSKNDINSIRRSNV         PQV+DTLWQLKSKDMLPAVWFIFSRKGCDAAVQ
Sbjct: 421  RQATLSKNDINSIRRSNVLGWLLSFQVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQ 480

Query: 481  YIEGKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEE 540
            YI+  NLLDD ERSEVELALRKFRIQFPDAVRESA+KGLLQGVAAHHAGCLPLWKSFIEE
Sbjct: 481  YIDSSNLLDDCERSEVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEE 540

Query: 541  LFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGI 600
            LFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSN+GRT L+ NELLQMAGRAGRRGI
Sbjct: 541  LFQRGLVKVVFATETLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGI 600

Query: 601  DKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTK 660
            DKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMD TK
Sbjct: 601  DKKGHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDETK 660

Query: 661  AFQAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRR 720
            AFQA RTLEEARKLVEQSFGNYVGSNVM+AAKEELVKIEKEIE+LNLEITDEAID+K R+
Sbjct: 661  AFQAWRTLEEARKLVEQSFGNYVGSNVMLAAKEELVKIEKEIEMLNLEITDEAIDRKSRK 720

Query: 721  LMSDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKD 780
             +SD+AYNE+ ELQE LR +KR RTELRKEME QRICAL SLL+NLGDG LPFLCLQYKD
Sbjct: 721  FLSDMAYNEIAELQEELRLEKRHRTELRKEMESQRICALNSLLRNLGDGHLPFLCLQYKD 780

Query: 781  SEGVQHSIPAVLFGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSW 840
            SEGVQHSIP VL GNMDSSKL NMFPAD+SLSGAE NLG  L+PGAESSYYVALGSDNSW
Sbjct: 781  SEGVQHSIPTVLLGNMDSSKLGNMFPADSSLSGAESNLGITLEPGAESSYYVALGSDNSW 840

Query: 841  YLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGS 900
            YLFTEKWIKTVYKTGFPNVAL+KGD LPREIMR+LLDKEGMKWEKLADSELGSL+CMEGS
Sbjct: 841  YLFTEKWIKTVYKTGFPNVALSKGDALPREIMRSLLDKEGMKWEKLADSELGSLACMEGS 900

Query: 901  LETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFREYK 960
            LETWSWSLNVPVLNSLSENDELLQMS+SYMESL RYK QRNKV+R KKRIS+T+GFREYK
Sbjct: 901  LETWSWSLNVPVLNSLSENDELLQMSQSYMESLDRYKVQRNKVARLKKRISKTEGFREYK 960

Query: 961  KILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFP 1020
            KILDMAN+IEDKIRQLK RYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDIN+HVMFP
Sbjct: 961  KILDMANLIEDKIRQLKTRYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINTHVMFP 1020

Query: 1021 LGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPS 1080
            LGETAAAIRGENELWIA+VLRNKFLVQLKPTELA VCASLVSEGIK+RPGR+N+YIFEPS
Sbjct: 1021 LGETAAAIRGENELWIAMVLRNKFLVQLKPTELAAVCASLVSEGIKVRPGRNNSYIFEPS 1080

Query: 1081 RTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDE 1140
            RTVINM+NFLEEQRNSL DLQ+KHGV+I C LDSQFSGMVEAWASGLTWREIMMDCAMDE
Sbjct: 1081 RTVINMINFLEEQRNSLEDLQEKHGVNISCCLDSQFSGMVEAWASGLTWREIMMDCAMDE 1140

Query: 1141 GDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            GDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNR PISELAG
Sbjct: 1141 GDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1177

BLAST of Cp4.1LG11g07540 vs. NCBI nr
Match: gi|645229477|ref|XP_008221485.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Prunus mume])

HSP 1 Score: 1647.9 bits (4266), Expect = 0.0e+00
Identity = 876/1191 (73.55%), Postives = 1002/1191 (84.13%), Query Frame = 1

Query: 6    INVFSIISPQHLWPPL------SYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 65
            ++  SI++P H +  L      SYP    L     +    A  FC  K  P +SP  + F
Sbjct: 1    MDTLSILTPPHTFTRLLSLKRSSYPLLHHL-----TQTTHALGFCSPKSPPTYSPSSLRF 60

Query: 66   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGE-----L 125
            R + +SP S F  K QLSD DE+EDEDEDE E+EDDD+D  VAA+EYD D  G+     L
Sbjct: 61   RVTFQSPSSAFPAKSQLSDADEEEDEDEDEYEEEDDDED--VAADEYD-DVPGDIMSDGL 120

Query: 126  EQRYDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQ 185
            EQ  DE+  S+ A E S  PEEFK QRVEKL  EV+ FGE ++D +ELAS+Y+FRIDKFQ
Sbjct: 121  EQSDDEIVTSVAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQ 180

Query: 186  RQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRE 245
            R AI+AFLRGSSVVVSAPTSSGKTLIAEAA+VATVAR RRLFYTTPLKALSNQKFREFRE
Sbjct: 181  RLAIQAFLRGSSVVVSAPTSSGKTLIAEAASVATVARGRRLFYTTPLKALSNQKFREFRE 240

Query: 246  TFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHY 305
            TFGD NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMASS  GLFHVDVIVLDEVHY
Sbjct: 241  TFGDDNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHY 300

Query: 306  LSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLN 365
            LSD+ RGTVWEEIVIYCPK+VQLICLSATVANPDELAGWIGQIHGKTELVTS++RPVPL 
Sbjct: 301  LSDMYRGTVWEEIVIYCPKKVQLICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLT 360

Query: 366  WHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEIS-DD 425
            WHFSTKTSLLPLLD+ G HMNR+LS+NYLQL+ASG K YKDDGSRRR+ +R  +E+S DD
Sbjct: 361  WHFSTKTSLLPLLDKTGKHMNRRLSVNYLQLNASGTKSYKDDGSRRRSSRRRASEMSYDD 420

Query: 426  RTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIE 485
             T ++SR+  LSKNDIN I RS VPQ+ DTLW LKS+DMLPA+WFIFSRKGCDAAVQY++
Sbjct: 421  STGNMSRRP-LSKNDINLIHRSQVPQITDTLWHLKSRDMLPAIWFIFSRKGCDAAVQYVQ 480

Query: 486  GKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 545
              NLLDD E SEV+LAL++FRI++PDA+RE+AVKGLLQGVAAHHAGCLPLWKSFIEELFQ
Sbjct: 481  DNNLLDDCEMSEVQLALKRFRIKYPDAIRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 540

Query: 546  RGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKK 605
            RGLVKVVFATETLAAGINMPARTA+IASLSKRS+ GRTQL+ NEL QMAGRAGRRGID++
Sbjct: 541  RGLVKVVFATETLAAGINMPARTAIIASLSKRSDGGRTQLSPNELFQMAGRAGRRGIDER 600

Query: 606  GHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTS-EMDGTKAF 665
            GHVVL+Q+PYEGAE CCK++FAG+EPLVSQFTASYGMVLNLLAGAKVTH S E D T+A 
Sbjct: 601  GHVVLVQSPYEGAEACCKIVFAGLEPLVSQFTASYGMVLNLLAGAKVTHRSNESDDTEAS 660

Query: 666  QAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLM 725
            Q+GRTLEEARKLVEQSFGNYVGSNVM+AAKEEL +I+KEIE+L LEI+D+AID+K R+L+
Sbjct: 661  QSGRTLEEARKLVEQSFGNYVGSNVMLAAKEELTRIQKEIEILTLEISDDAIDRKSRKLL 720

Query: 726  SDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSE 785
            S  AY E+ +LQE LR++KR RTELR+ ME Q++ +L+ +L+   +G LPFLCLQYKDSE
Sbjct: 721  SGPAYKEIADLQEELRAEKRLRTELRRRMESQKLSSLRPMLEEFENGHLPFLCLQYKDSE 780

Query: 786  GVQHSIPAVLFGNMD---SSKLINMFPADN--SLSGAEPNLGKNLDPGAESSYYVALGSD 845
            GVQHSIPAV  G +D   SSKL +M  AD+  +L+        NL    E SYYVALGSD
Sbjct: 781  GVQHSIPAVYLGKVDSFSSSKLKHMVSADDAFALNAVTSEFESNL--VFEPSYYVALGSD 840

Query: 846  NSWYLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCM 905
            NSWYLFTEKWIKTVYKTGFPNVAL  GD LPREIM  LLDK  +KWEKL +SELG    M
Sbjct: 841  NSWYLFTEKWIKTVYKTGFPNVALALGDALPREIMSMLLDKTELKWEKLGESELGGFWNM 900

Query: 906  EGSLETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFR 965
            EGSLETWSWSLNVPVLNSLSE+DELL  SE+Y  ++ RYK+QRNKVSR KK+ISRT+GFR
Sbjct: 901  EGSLETWSWSLNVPVLNSLSEHDELLHKSEAYHNAVERYKDQRNKVSRLKKKISRTQGFR 960

Query: 966  EYKKILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHV 1025
            EYKKI+DMA   E+KI++LK R +RL+NRI+QIEPSGWKEFLQISNVIHE RALDIN+HV
Sbjct: 961  EYKKIVDMAKFTEEKIKRLKGRSRRLTNRIEQIEPSGWKEFLQISNVIHETRALDINTHV 1020

Query: 1026 MFPLGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIF 1085
            MFPLG TAAAIRGENELW+A+VLRNK L+ LKP ELA VCASLVSEGIK+RP ++N+YI+
Sbjct: 1021 MFPLGVTAAAIRGENELWLAMVLRNKILIDLKPPELAAVCASLVSEGIKVRPWKNNSYIY 1080

Query: 1086 EPSRTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCA 1145
            EPS TV+++VNFL+EQR+S L LQ+KHGV+ PC LD+QFSGMVEAW SGLTWREIMMDCA
Sbjct: 1081 EPSSTVVDVVNFLDEQRSSFLQLQEKHGVNKPCYLDTQFSGMVEAWVSGLTWREIMMDCA 1140

Query: 1146 MDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            MDEGDLARLLRRTIDLL QIPKLPDIDP LQ NA TAS++M+R PISELAG
Sbjct: 1141 MDEGDLARLLRRTIDLLVQIPKLPDIDPLLQSNAKTASNIMDRPPISELAG 1180

BLAST of Cp4.1LG11g07540 vs. NCBI nr
Match: gi|596295624|ref|XP_007227036.1| (hypothetical protein PRUPE_ppa000444mg [Prunus persica])

HSP 1 Score: 1643.6 bits (4255), Expect = 0.0e+00
Identity = 874/1191 (73.38%), Postives = 999/1191 (83.88%), Query Frame = 1

Query: 6    INVFSIISPQHLWPPL------SYPFPSSLCPRCSSPPIQATRFCRLKPLPIFSPFPVPF 65
            ++  SI++P H +  L      SYP    L     +       FC  K  P +SP  + F
Sbjct: 1    MDTLSILTPPHTFTRLLSLKRSSYPLLHHL-----TQTTHVLGFCSPKSPPTYSPSSLRF 60

Query: 66   RPSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDDDVAAEEYDIDAFGE-----L 125
            R + +SP S F  K QLSD DE+EDEDE E+ED    DD+DVAA+EYD D  G+     L
Sbjct: 61   RVTFQSPSSAFPAKSQLSDADEEEDEDEYEEED----DDEDVAADEYD-DVPGDIMSDGL 120

Query: 126  EQRYDEVELSMEATEISIAPEEFKSQRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQ 185
            EQ  DE++ SM A E S  PEEFK QRVEKL  EV+ FGE ++D +ELAS+Y+FRIDKFQ
Sbjct: 121  EQSDDEIDTSMAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQ 180

Query: 186  RQAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRE 245
            R AI+AFLRGSSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTTPLKALSNQKFREFRE
Sbjct: 181  RLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGMRLFYTTPLKALSNQKFREFRE 240

Query: 246  TFGDSNVGLLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHY 305
            TFGD NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSVGMASS  GLFHVDVIVLDEVHY
Sbjct: 241  TFGDDNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHY 300

Query: 306  LSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLN 365
            LSD+ RGTVWEEIVIYCPK+VQLICLSATVANPDELAGWIGQIHGKTELVTS++RPVPL 
Sbjct: 301  LSDMYRGTVWEEIVIYCPKKVQLICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLT 360

Query: 366  WHFSTKTSLLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEIS-DD 425
            WHFSTKTSLLPLLD+ G HMNR+LS+NYLQL+ASG K YKDDGSRRR+ +R  +E+S DD
Sbjct: 361  WHFSTKTSLLPLLDKTGKHMNRRLSVNYLQLNASGTKSYKDDGSRRRSSRRRASEMSYDD 420

Query: 426  RTSSLSRQATLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIE 485
             T ++SR+  LSKNDIN I RS VPQ+ DTLW LKS+DMLPA+WFIFSRKGCDAAVQY++
Sbjct: 421  STGNMSRRP-LSKNDINLIHRSQVPQITDTLWHLKSRDMLPAIWFIFSRKGCDAAVQYVQ 480

Query: 486  GKNLLDDYERSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 545
              NLLDD E SEV+LAL++FRI++PDA+RE+AVKGLLQGVAAHHAGCLPLWKSFIEELFQ
Sbjct: 481  DNNLLDDCEMSEVQLALKRFRIKYPDAIRETAVKGLLQGVAAHHAGCLPLWKSFIEELFQ 540

Query: 546  RGLVKVVFATETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKK 605
            RGLVKVVFATETLAAGINMPARTA+IASLSKRS+SGRTQL+ NEL QMAGRAGRRGID++
Sbjct: 541  RGLVKVVFATETLAAGINMPARTAIIASLSKRSDSGRTQLSPNELFQMAGRAGRRGIDER 600

Query: 606  GHVVLLQTPYEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTS-EMDGTKAF 665
            GHVVL+Q+PYEGAE CCK++FAG+EPLVSQFTASYGMVLNLLAGAK T  S E D T+A 
Sbjct: 601  GHVVLVQSPYEGAEACCKIVFAGLEPLVSQFTASYGMVLNLLAGAKFTSRSNESDDTEAS 660

Query: 666  QAGRTLEEARKLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIDKKCRRLM 725
            Q+GRTLEEARKLVEQSFGNYVGSNVM+AAKEEL +I+KEIE+L LEI+D+AID+K R+L+
Sbjct: 661  QSGRTLEEARKLVEQSFGNYVGSNVMLAAKEELTRIQKEIEILTLEISDDAIDRKSRKLL 720

Query: 726  SDVAYNELVELQEGLRSDKRQRTELRKEMELQRICALKSLLQNLGDGQLPFLCLQYKDSE 785
            S  AY E+ +LQE LR++KR RTELR+ ME Q++ +L+ +L+   DG LPFLCLQYKDSE
Sbjct: 721  SGPAYKEIADLQEELRAEKRLRTELRRRMESQKLSSLRPMLEEFEDGHLPFLCLQYKDSE 780

Query: 786  GVQHSIPAVLFGNMDS---SKLINMFPADN--SLSGAEPNLGKNLDPGAESSYYVALGSD 845
            GVQHSIPAV  G +DS   SKL +M  AD+  +L+        NL    E SYYVALGSD
Sbjct: 781  GVQHSIPAVYLGKVDSFSRSKLKHMVSADDAFALNAVTSEFESNL--VFEPSYYVALGSD 840

Query: 846  NSWYLFTEKWIKTVYKTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCM 905
            NSWYLFTEKWIKT+YKTGFPNVAL  GD LPREIM  LLDK  +KWEKLA+SELG    M
Sbjct: 841  NSWYLFTEKWIKTIYKTGFPNVALALGDALPREIMSMLLDKTELKWEKLAESELGGFWNM 900

Query: 906  EGSLETWSWSLNVPVLNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTKGFR 965
            EGSLETWSWSLNVPVLNSLSE+DELL  SE+Y  ++ RYK+QRNKVSR KK+ISRT+GFR
Sbjct: 901  EGSLETWSWSLNVPVLNSLSEHDELLHKSEAYHNAVERYKDQRNKVSRLKKKISRTQGFR 960

Query: 966  EYKKILDMANIIEDKIRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHV 1025
            EYKKI+DMA   E+KI++LK R +RL+NRI+QIEPSGWKEFLQISNVIHE RALDIN+HV
Sbjct: 961  EYKKIVDMAKFTEEKIKRLKGRSRRLTNRIEQIEPSGWKEFLQISNVIHETRALDINTHV 1020

Query: 1026 MFPLGETAAAIRGENELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIF 1085
            MFPLG TAAAIRGENELW+A+VLRNK L+ LKP ELA VCASLVSEGIKIRP ++N+YI+
Sbjct: 1021 MFPLGVTAAAIRGENELWLAMVLRNKILIDLKPPELAAVCASLVSEGIKIRPWKNNSYIY 1080

Query: 1086 EPSRTVINMVNFLEEQRNSLLDLQQKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCA 1145
            EPS TV+++VNFL+EQR+S L LQ+KHGV+ PC LD+QFSGMVEAW SGLTW+EIMMDCA
Sbjct: 1081 EPSSTVVDVVNFLDEQRSSFLQLQEKHGVNKPCYLDTQFSGMVEAWVSGLTWKEIMMDCA 1140

Query: 1146 MDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG 1179
            MDEGDLARLLRRTIDLL QIPKLPDIDP LQ NA TAS++M+R PISELAG
Sbjct: 1141 MDEGDLARLLRRTIDLLVQIPKLPDIDPLLQSNAKTASNIMDRPPISELAG 1178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ISE2_ARATH0.0e+0069.95DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana... [more]
HELY_MYCLE1.4e-8239.10Probable helicase HelY OS=Mycobacterium leprae (strain TN) GN=helY PE=3 SV=1[more]
HELY_MYCTO1.9e-7937.55Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)... [more]
HELY_MYCTU1.9e-7937.55Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)... [more]
SKI2_SCHPO1.8e-7733.80Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strai... [more]
Match NameE-valueIdentityDescription
A0A0A0KNK4_CUCSA0.0e+0088.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484640 PE=4 SV=1[more]
M5Y8A0_PRUPE0.0e+0073.38Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000444mg PE=4 SV=1[more]
A0A061E5K5_THECC0.0e+0072.51DEAD/DEAH box helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_010129 PE=4... [more]
D7TNJ6_VITVI0.0e+0077.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01000 PE=4 SV=... [more]
V4TEM8_9ROSI0.0e+0072.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030551mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G70070.10.0e+0069.95 DEAD/DEAH box helicase, putative[more]
AT3G46960.18.9e-7234.94 RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT2G06990.12.5e-6631.31 RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT1G59760.19.6e-6635.14 RNA helicase, ATP-dependent, SK12/DOB1 protein[more]
AT4G32700.25.3e-1636.36 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;D... [more]
Match NameE-valueIdentityDescription
gi|659131497|ref|XP_008465717.1|0.0e+0089.65PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase ISE2, chloro... [more]
gi|778702993|ref|XP_011655295.1|0.0e+0088.89PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [C... [more]
gi|778702990|ref|XP_011655294.1|0.0e+0088.22PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [C... [more]
gi|645229477|ref|XP_008221485.1|0.0e+0073.55PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Prunus mume][more]
gi|596295624|ref|XP_007227036.1|0.0e+0073.38hypothetical protein PRUPE_ppa000444mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR012961Ski2_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016556 mRNA modification
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:0016441 posttranscriptional gene silencing
biological_process GO:0008150 biological_process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0010494 cytoplasmic stress granule
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004386 helicase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07540.1Cp4.1LG11g07540.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 528..589
score: 1.
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 503..589
score: 1.2
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 439..635
score: 1
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 173..325
score: 9.3
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 1010..1173
score: 3.7
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 1003..1177
score: 7.1
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 166..356
score: 3.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 178..342
score: 24
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 173..355
score: 1.7E-37coord: 512..596
score: 1.6E-17coord: 447..477
score: 1.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 419..474
score: 2.02E-42coord: 178..327
score: 2.02E-42coord: 509..602
score: 2.02
NoneNo IPR availableunknownCoilCoilcoord: 720..740
score: -coord: 949..976
score: -coord: 678..698
scor
NoneNo IPR availableGENE3DG3DSA:1.10.601.10coord: 78..172
score: 5.