CsaV3_5G024010 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G024010
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	U-box domain-containing protein 4
Location	chr5 : 18661547 .. 18665167 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTTTCTTTTTCCTAACTGTTGCTTAAAGCCACGCTCTTCTCTTCTCTTCCTCTTAAATCTCTCTCACATCTCTCTAACTCACCACCCCCTTCTTCCTCCCTCATGGATTATTGCACCTCTCCCTCCGCCACCCACCACCGCACCTCCTCCGCCTCCTCTCCCGACGCCGCCGTTCTTAAGGCTCTCCTCCTTGTTCAATCCGACGCTCTCGATTCCAAGTTCCAAGGCGCCTCTGAAATTCGCCGACTCACCAAAACCTCCCAACGCTGCCGCCGTCACCTCTCTCAATCAATCCCCCATCTCGTCTCCATGCTCCACCGCCTTCACTCCCCTGAATCCCACCTCGAGGCCGCTCTCCTTGCTCTTCTCAACCTTGCCGTTAAGGATGAAAAGTAATTAATTCCCTCCTAGATCTCTTTTGCCTTCTATTTCACTTGATTCCTTTTCATTCTTTTTTAAATTTTGATTGACTTTACTCTTTCCGTTTACTTTAATCTTTTTTTTTTTTTTAATTAGTTTCGCTTTTTTATTTGTTTCATCAAATCAGCGATACCCCATGAGGTTTTATGGCTAGTTATATTATTTTCTTACTTTTGTTTGGCCGGTGAGAATAAGGGAATGTAAAATGTAAAAAAAGTAGACGGAGGAGGAGGAGGAGGAAGATGGGGAAGAAAATCTATCTCACAAGAAATTTAAATGTGTTGATTGGCCAATTAAATAGAGATATGCTTTCTTGGATTCCCTTAAGATGACGATTTTCTTTTATATTGACTATGTTTTTTGAATTGATAAAGAATTTGCTAGCTCTATATTTGTGTTTGTCCTGTTGGGCTTCGTTTATTCTATTGTTAATTATACTGTTGTTATTTTGTGGCTTTAGTTGTTGGAGGCTTCCCCTTTTCCCCCCCTTTTTTTTTTATTTTTGCAATGTGGTTGGCATGGCACGAGGTGGTTGAGGTCTTCAAAAGAAATGGATAATGTGTTTATTTTGTCTGTTTTCTATTTGAAATGAAAGTCTCCAGATATTTTCATTCTTCATGATTTAAGGTCCATGGGAAATATGTTGTTATTAGTATATATGATATTTCTCTTAGTTACTACTTTTTGATGTGATGTGGGATGATCTGTTTTTGAGTGATTTGAAGAAACATTATTTGAAGGTTTCGTAGAAAAGGTATTCAACGTATAGACTCAATCTTTCGAAATTGAAACATGATTTTCTTTATAACTGGTTTGTTACTCTGTTGATTTTCGTATTATCTCCTCTGCTCTTTCATTAGCTTGTTTATACCTTACAGGAACCTCCCCTCCCCATTTGACTGCACTCTTGCTAACTAAACTCATTGGCCTACATATAATTGGCTCCTCCATCCGTACATGCACGCTGACTGTATCTTGCACATGTGCTATTTCGCTGTTCTTTACTTGTTCCTTGCACATGATATTGCCCTGTCTTGTTCCTTCTATAGCAGTTTTGAAAATTTTCCTAGAAAGTTTTGGTCTAAATTTCAGTTTGTGGAACTCCTGTTCACATCATGTTTTAAACTGTTTCAGTACCATGAATGATACTGTTTGCTGAAGGAAGAATATAGCTGTAGTGATTTTTGTGTTAGGTAATGTAATGAGATTTGATTTTGTTAATTTAATGGCATCTGTTTCTTTAGTTTGTTCGTGGTAGGTTTCTGATAATTGATTCCATGTGTAACACTGACTTTTAGTACCAATCCTTCATATATTAATTTATTGTAATAATATGCCTACAGGAATAAGATCAAGATTGTAGAAGCTGGTGCCTTGGGACCAATAATTGGTTTTCTTCAGTCAGAGAGTTTGATACTACAGGAGAATGCAACTGCTTCTTTACTCACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCCGGTGCCATTCCTCTCCTTGTGGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCCCTTTCCAATCTTTCAACACTTCCACATAATCTTAGCATCATTCTAGATTCAAACCCAGTCCCTGCAATAGTTAGTCTATTGAAAACTTGTAAAAAATCTTCAAAAACTGCTGAAAAATGCTGCTCACTGATTGAATACTTAGTTGGTTTTGATGAAGGCAGAATAGCATTGACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTCGAAGTACTCGAGAATGGCTCTCTTCAAAGTCGTGATCATGCTGTTGGTGCACTATTGACAATGTGTGAGAGTGACCGGTGCAAATACAGAGAACCTATCTTGGGAGAAGGGGTAATCCCAGGCCTTCTTGAACTTACTGTCCAAGGGACACCTAAATCCCAGTCAAAGGCTAAAACCCTCCTAAGGCTATTAAGAGACTCTCCATATCCAAGATCTGAACTTCAAGCAGACACAATCGAGAACATTGTTTGTAACATTATCTCTCAAATTGATGGAGACGATGATCAATCTAGTAAAGCAAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAACAAAGCTTGAGGCATTTACAAAGAAGGGCTCTGGTATGCACACCCACTGAAATGCCTATTAATACATGCACCTCTGAAGTTTCTTCAAAGTAATAAAATTTGTACTTAGCTTTGTCCATGGAGTTTGTAACATAAACTTCTATAGTTGTTACTGTTAGAGAACAGGATCATAAAATAAGATGAATAGGAAAACAAGCCAGTCCAGGCAGGTAGTGGGAGTGTCGGGAGACTGGTAAAATGTCAATAAAACTGGGAATGGGATCTGTACGAGGCTTAAATCATACTCTTTTTTTCTTTCCTTTTTGCTTGTTTTGTATATCTTCTGTGTATTACATTAAAGAAATAGTGAAGTTTATAAGTGTTCGTCCCCTTCTGATTGTTACGTGTCCTTCTCTTATGGTACATAAATATTGAGTTGTTTGGCCCTTATTAAATCAACTTCAATAGTGTTATTACTGAAGTTTGCACATGTATCAGTGACTTTATTTTTATTTTCTCAATTTCTTGTAGAGATCTTCATCTTATAACTTTCCGCACCCAGCCTTTCTAACTCTAACATATTAACTATGTACTTCATAACTCAATTCAACATCTCTTGGACATGTTGTATGATACAATGGAGAAACTAGTGTCATTTTCTCATGGGTTTATGTGAGTTTGAATTGTCATGTCTGTGATATTTATGAATTATTAGAAGGGTACTAACTTTAGCTTCTTCATGTGCATGTACATAGCATAAAGCCAAAGTACTCGATGATCACAAGGCAAAAGAAAGGTAATCAGGAAAGAAGGATAAGGAAACTAGGAATAGGTTCTTTCCTTGGGTTACAAGTGATTTTTGTGCAACTCTTGCCTTGGATACCCTTTCTATCCATACCTTGTTTGAAGGAGAAAGAGGAAATGAATCTTCATTCTAACTTGCTATCACTACACATATGCACACACGTGTCTAAAAGTAGAAGGCACATCCCTTTTTTTAACCTCATTTACGTAAAGCTAGAATGATTGGGCAAGGAC

mRNA sequence

ATGGATTATTGCACCTCTCCCTCCGCCACCCACCACCGCACCTCCTCCGCCTCCTCTCCCGACGCCGCCGTTCTTAAGGCTCTCCTCCTTGTTCAATCCGACGCTCTCGATTCCAAGTTCCAAGGCGCCTCTGAAATTCGCCGACTCACCAAAACCTCCCAACGCTGCCGCCGTCACCTCTCTCAATCAATCCCCCATCTCGTCTCCATGCTCCACCGCCTTCACTCCCCTGAATCCCACCTCGAGGCCGCTCTCCTTGCTCTTCTCAACCTTGCCGTTAAGGATGAAAAGAATAAGATCAAGATTGTAGAAGCTGGTGCCTTGGGACCAATAATTGGTTTTCTTCAGTCAGAGAGTTTGATACTACAGGAGAATGCAACTGCTTCTTTACTCACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCCGGTGCCATTCCTCTCCTTGTGGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCCCTTTCCAATCTTTCAACACTTCCACATAATCTTAGCATCATTCTAGATTCAAACCCAGTCCCTGCAATAGTTAGTCTATTGAAAACTTGTAAAAAATCTTCAAAAACTGCTGAAAAATGCTGCTCACTGATTGAATACTTAGTTGGTTTTGATGAAGGCAGAATAGCATTGACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTCGAAGTACTCGAGAATGGCTCTCTTCAAAGTCGTGATCATGCTGTTGGTGCACTATTGACAATGTGTGAGAGTGACCGGTGCAAATACAGAGAACCTATCTTGGGAGAAGGGGTAATCCCAGGCCTTCTTGAACTTACTGTCCAAGGGACACCTAAATCCCAGTCAAAGGCTAAAACCCTCCTAAGGCTATTAAGAGACTCTCCATATCCAAGATCTGAACTTCAAGCAGACACAATCGAGAACATTGTTTGTAACATTATCTCTCAAATTGATGGAGACGATGATCAATCTAGTAAAGCAAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAACAAAGCTTGAGGCATTTACAAAGAAGGGCTCTGCATAAAGCCAAAGTACTCGATGATCACAAGGCAAAAGAAAGGTAA

Coding sequence (CDS)

ATGGATTATTGCACCTCTCCCTCCGCCACCCACCACCGCACCTCCTCCGCCTCCTCTCCCGACGCCGCCGTTCTTAAGGCTCTCCTCCTTGTTCAATCCGACGCTCTCGATTCCAAGTTCCAAGGCGCCTCTGAAATTCGCCGACTCACCAAAACCTCCCAACGCTGCCGCCGTCACCTCTCTCAATCAATCCCCCATCTCGTCTCCATGCTCCACCGCCTTCACTCCCCTGAATCCCACCTCGAGGCCGCTCTCCTTGCTCTTCTCAACCTTGCCGTTAAGGATGAAAAGAATAAGATCAAGATTGTAGAAGCTGGTGCCTTGGGACCAATAATTGGTTTTCTTCAGTCAGAGAGTTTGATACTACAGGAGAATGCAACTGCTTCTTTACTCACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCCGGTGCCATTCCTCTCCTTGTGGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCCCTTTCCAATCTTTCAACACTTCCACATAATCTTAGCATCATTCTAGATTCAAACCCAGTCCCTGCAATAGTTAGTCTATTGAAAACTTGTAAAAAATCTTCAAAAACTGCTGAAAAATGCTGCTCACTGATTGAATACTTAGTTGGTTTTGATGAAGGCAGAATAGCATTGACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTCGAAGTACTCGAGAATGGCTCTCTTCAAAGTCGTGATCATGCTGTTGGTGCACTATTGACAATGTGTGAGAGTGACCGGTGCAAATACAGAGAACCTATCTTGGGAGAAGGGGTAATCCCAGGCCTTCTTGAACTTACTGTCCAAGGGACACCTAAATCCCAGTCAAAGGCTAAAACCCTCCTAAGGCTATTAAGAGACTCTCCATATCCAAGATCTGAACTTCAAGCAGACACAATCGAGAACATTGTTTGTAACATTATCTCTCAAATTGATGGAGACGATGATCAATCTAGTAAAGCAAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAACAAAGCTTGAGGCATTTACAAAGAAGGGCTCTGCATAAAGCCAAAGTACTCGATGATCACAAGGCAAAAGAAAGGTAA

Protein sequence

MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPHNLSIILDSNPVPAIVSLLKTCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALHKAKVLDDHKAKER

Homology

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BLAST of CsaV3_5G024010 vs. NCBI nr
Match: XP_004140305.1 (PREDICTED: U-box domain-containing protein 2 [Cucumis sativus] >KGN51043.1 hypothetical protein Csa_5G418780 [Cucumis sativus])

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60
           MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL
Sbjct: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60

Query: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120
           SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL
Sbjct: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120

Query: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240
           XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240

Query: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300
           LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR
Sbjct: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300

Query: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360
           LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR
Sbjct: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360

Query: 361 AL 363
           AL
Sbjct: 361 AL 362

[Close]

BLAST of CsaV3_5G024010 vs. NCBI nr
Match: XP_008460513.1 (PREDICTED: U-box domain-containing protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 511.1 bits (1315), Expect = 3.1e-141
Identity = 349/363 (96.14%), Postives = 350/363 (96.42%), Query Frame = 0


Query: 1   MDYCTSPSATH-HRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 60
           MDYCTSPSATH          DAA+ KALLLVQSDALDSKFQGA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCTSPSATHXXXXXXXXXXDAALHKALLLVQSDALDSKFQGACEIRRLTKTSQRCRRH 60

Query: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120
           LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120

Query: 121 LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVE 240
           XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIE LVGFDEGRIALTSEEGGVLAVVE
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVE 240

Query: 241 VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL 300
           VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL
Sbjct: 241 VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL 300

Query: 301 RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR 360
           RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR
Sbjct: 301 RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR 360

Query: 361 RAL 363
           RAL
Sbjct: 361 RAL 363

[Close]

BLAST of CsaV3_5G024010 vs. NCBI nr
Match: XP_022992877.1 (U-box domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 496.1 bits (1276), Expect = 1.0e-136
Identity = 340/362 (93.92%), Postives = 347/362 (95.86%), Query Frame = 0


Query: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60
           MDY +SPS +HHRT  A S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSESHHRT--AVSTEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240
           XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIE LVGFDEGR+ALTSEEGGVLAVVEV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIESLVGFDEGRVALTSEEGGVLAVVEV 240

Query: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300
           LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR
Sbjct: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300

Query: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360
           LLRDSPYPRSELQ DTIENIVCNII QIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQRR
Sbjct: 301 LLRDSPYPRSELQPDTIENIVCNIIYQIDGKDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360

Query: 361 AL 363
           AL
Sbjct: 361 AL 360

[Close]

BLAST of CsaV3_5G024010 vs. NCBI nr
Match: XP_022939065.1 (U-box domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 495.7 bits (1275), Expect = 1.4e-136
Identity = 340/362 (93.92%), Postives = 347/362 (95.86%), Query Frame = 0


Query: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60
           MDY +SPS +HHRT+   S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSGSHHRTT--VSTEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240
           XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIE LVGFDEGRIALTSEEGGVLAVVEV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEV 240

Query: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300
           LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR
Sbjct: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300

Query: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360
           LLRDSPYPRSELQ DTIENIVCNII QIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQRR
Sbjct: 301 LLRDSPYPRSELQPDTIENIVCNIIYQIDGKDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360

Query: 361 AL 363
           AL
Sbjct: 361 AL 360

[Close]

BLAST of CsaV3_5G024010 vs. NCBI nr
Match: XP_023550373.1 (U-box domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.7 bits (1275), Expect = 1.4e-136
Identity = 340/362 (93.92%), Postives = 347/362 (95.86%), Query Frame = 0


Query: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60
           MDY +SPS +HHRT  A S +AAVLKALLLVQSDALDSK QGA EIRRLTKTSQRCRR L
Sbjct: 1   MDYYSSPSGSHHRT--AVSTEAAVLKALLLVQSDALDSKLQGACEIRRLTKTSQRCRRQL 60

Query: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120
           S+SIPHLVSMLH LH P+SHLEAALLALLNLAVKDEKNKIKIVEAGALGPI+GFLQSESL
Sbjct: 61  SESIPHLVSMLHPLHYPDSHLEAALLALLNLAVKDEKNKIKIVEAGALGPIVGFLQSESL 120

Query: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240
           XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIE LVGFD+GRIALTSEEGGVLAVVEV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIESLVGFDDGRIALTSEEGGVLAVVEV 240

Query: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300
           LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR
Sbjct: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300

Query: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360
           LLRDSPYPRSELQ DTIENIVCNII QIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQRR
Sbjct: 301 LLRDSPYPRSELQPDTIENIVCNIIYQIDGKDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360

Query: 361 AL 363
           AL
Sbjct: 361 AL 360

[Close]

BLAST of CsaV3_5G024010 vs. TAIR10
Match: AT3G03440.1 (ARM repeat superfamily protein)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91
Identity = 203/337 (60.24%), Postives = 227/337 (67.36%), Query Frame = 0


Query: 26  KALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSPESHLEAAL 85
           + L L++S+  DS+   A EIRRLTKTS RCRRH SQ++  LVSML R  SPESH EAAL
Sbjct: 68  RVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSML-RFDSPESHHEAAL 127

Query: 86  LALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVXXXXXXX 145
           LALLNLAVKDEKNK+ I+EAGAL PII FLQS S  LQE A+ASLLTLSAS         
Sbjct: 128 LALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGA 187

Query: 146 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKKSSK 205
                                                                  KKSSK
Sbjct: 188 NGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSK 247

Query: 206 TAEKCCSLIEYL-VGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDR 265
           T+EKCCSLIE L V  +E R  L S+EGGVLAVVEVLENGSLQ+R+HAVG LLT+C+SDR
Sbjct: 248 TSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDR 307

Query: 266 CKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIVCNI 325
            KYREPIL EGVIPGLLELTVQGT KS+ KA+ LL LLR+S  PRSE+Q DTIENIV ++
Sbjct: 308 SKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIENIVSSL 367

Query: 326 ISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRA 362
           IS IDG DDQS KAKKMLAEMVQVSME+SLRHLQ RA
Sbjct: 368 ISHIDG-DDQSGKAKKMLAEMVQVSMEKSLRHLQERA 402

[Close]

BLAST of CsaV3_5G024010 vs. TAIR10
Match: AT4G12710.1 (ARM repeat superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 8.1e-35
Identity = 163/340 (47.94%), Postives = 206/340 (60.59%), Query Frame = 0


Query: 36  LDSKFQGASEIRRL-----TKTSQRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLN 95
           LD + + A EIR+L      K+S R +   +  IP LV ML   +    H  A+LLALLN
Sbjct: 59  LDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARH--ASLLALLN 118

Query: 96  LAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVXXXXXXXXXXXX 155
           LAV++E+NK                                   A+  XXXXXXXXXXXX
Sbjct: 119 LAVRNERNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAXXXXXXXXXXXX 178

Query: 156 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKKSSKTAEKC 215
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             CKK SK AEK 
Sbjct: 179 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAVYPLIHLLKECKKHSKFAEKA 238

Query: 216 CSLIEYLVGFDE-GRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYRE 275
            +L+E ++   E GR A+TS E G+L +VE +E+GS  S +HAVGALL++C SDR KYR+
Sbjct: 239 TALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRK 298

Query: 276 PILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIVCNIISQID 335
            IL EG IPGLL  TV GT KS+ +A+ LL LLR++P  + E+   T+E IV  I  Q+D
Sbjct: 299 LILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRETPREK-EMTPLTLEKIVYGIAVQVD 358

Query: 336 GDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALHKAKVLD 370
           G +  +  AKK+L +MV  SME S++ +Q +A   A + D
Sbjct: 359 GAEKAAETAKKLLQDMVHRSMELSMKSIQHKAASCASIPD 395

[Close]

BLAST of CsaV3_5G024010 vs. TAIR10
Match: AT5G14510.1 (ARM repeat superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 4.5e-17
Identity = 56/149 (37.58%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 200 CKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTM 259
           C KSS+ A+K  +L+E ++       +++S  G +  +VE +E GS Q ++HAVG LL +
Sbjct: 178 CDKSSELADKAVALLENIISHSPE--SVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLGI 237

Query: 260 CESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD-SPYPRSELQADTIE 319
           C +DR   R  IL EGV+PGLL+++V GT +++  A+ LL LLRD S Y     Q+    
Sbjct: 238 CNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLRDCSGYVIKNKQSKI-- 297

Query: 320 NIVCNIISQIDGDDDQ-SSKAKKMLAEMV 347
            IV  I+ +ID + ++      K++ EM+
Sbjct: 298 EIVEQIMREIDQEGERIPGTMLKLVEEMI 322

[Close]

BLAST of CsaV3_5G024010 vs. TAIR10
Match: AT2G25130.1 (ARM repeat superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 75/329 (22.80%), Postives = 134/329 (40.73%), Query Frame = 0


Query: 39  KFQGASEIRRLTKTSQRCRRHLSQ--SIPHLVSMLHRLHSPESHLEAALLALLNLAVKDE 98
           K   ASE+R L K     R  L+   +IP LVSM+      E  L A+L ALLNL + ++
Sbjct: 126 KIAAASEVRLLAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGND 185

Query: 99  KNKIKIVEAGALGPIIGFLQSE---SLILQENATASLLTLSASTVXXXXXXXXXXXXXXX 158
            NK  IV+AG +  ++  ++S    +  + E   A+ L LSA                  
Sbjct: 186 VNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLV 245

Query: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSL 218
                                                              + +E+  ++
Sbjct: 246 KTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAI 305

Query: 219 IEYLVGFDEGRIALTSEEGGVLAVVEVLE-NGSLQSRDHAVGALLTMCESDRCKYREPIL 278
           +  +V   EGR A+         +V+VL  N S++ ++ AV  L+ M        R  ++
Sbjct: 306 LTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGD-RNAMI 365

Query: 279 GEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDD 338
             G+   LLELT+ G+P +Q +A  +L  LR     + +  +  I     + + +  G D
Sbjct: 366 EAGIESSLLELTLVGSPLAQKRASRVLECLR--VVDKGKQVSAPIYG--TSSLGRERGHD 425

Query: 339 DQSSKAKKMLAEMVQVSMEQSLRHLQRRA 362
            + +  +K + ++VQ S++ +++ + +RA
Sbjct: 426 LRMTDERKAVKQLVQQSLQSNMKRIVKRA 449

[Close]

BLAST of CsaV3_5G024010 vs. TAIR10
Match: AT1G27910.1 (plant U-box 45)

HSP 1 Score: 52.8 bits (125), Expect = 5.5e-07
Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 208 EKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMC-ESDRCK 267
           EK  +++  LV  + G+  + S    V  +  +L+ G    ++ AV  LL +C  S+ C 
Sbjct: 609 EKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICS 668

Query: 268 YREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD 305
             E +L EGVIP L+ ++V GT + + +A+ LL L R+
Sbjct: 669 --EMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRE 704

[Close]

BLAST of CsaV3_5G024010 vs. Swiss-Prot
Match: sp|Q9C7G1|PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.9e-06
Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 208 EKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMC-ESDRCK 267
           EK  +++  LV  + G+  + S    V  +  +L+ G    ++ AV  LL +C  S+ C 
Sbjct: 609 EKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICS 668

Query: 268 YREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD 305
             E +L EGVIP L+ ++V GT + + +A+ LL L R+
Sbjct: 669 --EMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRE 704

[Close]

BLAST of CsaV3_5G024010 vs. Swiss-Prot
Match: sp|Q9C7R6|PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=PUB17 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.4e-05
Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 202 KSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCE 261
           K+   AE+    +  LV    G  A+  E+  V  ++ ++  G+ + +++AV ALL +C 
Sbjct: 584 KNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCR 643

Query: 262 SDRCKYREPILGEGVIPGLLE-LTVQGTPKSQSKAKTLLRLLR 304
           S      E +L    I GLL+ L   GT +++ KA +L R+ +
Sbjct: 644 SGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQ 686

[Close]

BLAST of CsaV3_5G024010 vs. Swiss-Prot
Match: sp|Q9LT79|PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.4e-05
Identity = 35/100 (35.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 208 EKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKY 267
           E+  + +E L    EG  A       V  +V+ +   S ++ ++A GALL +C ++  ++
Sbjct: 302 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEE-RW 361

Query: 268 REPILGEGVIPGLLELTVQG--TPKSQSKAKTLLRLLRDS 306
           RE   G GV+  LL L VQ   T +++ KA+ LL+LLRDS
Sbjct: 362 REEAAGAGVVVQLL-LMVQSECTERAKKKAQKLLKLLRDS 399

[Close]

BLAST of CsaV3_5G024010 vs. TrEMBL
Match: tr|A0A0A0KNA6|A0A0A0KNA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418780 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 7.5e-152
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60
           MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL
Sbjct: 1   MDYCTSPSATHHRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHL 60

Query: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120
           SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL
Sbjct: 61  SQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESL 120

Query: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 ILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240
           XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEV 240

Query: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300
           LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR
Sbjct: 241 LENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLR 300

Query: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360
           LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR
Sbjct: 301 LLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRR 360

Query: 361 AL 363
           AL
Sbjct: 361 AL 362

[Close]

BLAST of CsaV3_5G024010 vs. TrEMBL
Match: tr|A0A1S3CC78|A0A1S3CC78_CUCME (U-box domain-containing protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499314 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.1e-141
Identity = 349/363 (96.14%), Postives = 350/363 (96.42%), Query Frame = 0


Query: 1   MDYCTSPSATH-HRTSSASSPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 60
           MDYCTSPSATH          DAA+ KALLLVQSDALDSKFQGA EIRRLTKTSQRCRRH
Sbjct: 1   MDYCTSPSATHXXXXXXXXXXDAALHKALLLVQSDALDSKFQGACEIRRLTKTSQRCRRH 60

Query: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120
           LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES
Sbjct: 61  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 120

Query: 121 LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVE 240
           XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIE LVGFDEGRIALTSEEGGVLAVVE
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVE 240

Query: 241 VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL 300
           VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL
Sbjct: 241 VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL 300

Query: 301 RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR 360
           RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR
Sbjct: 301 RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR 360

Query: 361 RAL 363
           RAL
Sbjct: 361 RAL 363

[Close]

BLAST of CsaV3_5G024010 vs. TrEMBL
Match: tr|A0A1R3JLN7|A0A1R3JLN7_9ROSI (Armadillo OS=Corchorus olitorius OX=93759 GN=COLO4_15727 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.5e-110
Identity = 298/363 (82.09%), Postives = 321/363 (88.43%), Query Frame = 0


Query: 9   ATHHRTSSASSPD---------AAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRH 68
           A +H  SS+SS D         +AV +AL L+QSD LDSK Q A EIRRLTKTSQRCRR 
Sbjct: 5   ADNHSPSSSSSSDVDGTPRGATSAVHRALQLIQSDDLDSKLQAAKEIRRLTKTSQRCRRL 64

Query: 69  LSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSES 128
           L+ ++  LVSML RL SPESH E+ALLALLNLAVKDEKNKI IVEAGAL P+I FL +E+
Sbjct: 65  LADAVVPLVSML-RLDSPESHHESALLALLNLAVKDEKNKISIVEAGALEPVISFLHNEN 124

Query: 129 LILQENATASLLTLSASTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           L LQE ATA+LLTLSAS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 125 LNLQEYATAALLTLSASVNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184

Query: 189 XXXXXXXXXXXXXXXXXXXXCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVE 248
           XXXXXXXXXXXXXXXXXX  CKKSSKTAEKCCSLIE LVGFDEGR +LT+E+GGVLAVVE
Sbjct: 185 XXXXXXXXXXXXXXXXXXITCKKSSKTAEKCCSLIESLVGFDEGRTSLTAEDGGVLAVVE 244

Query: 249 VLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLL 308
           VLENG+LQ+R+HAVGALLTMCESDRCKYREPIL EGVIPGLLELTVQGTPKSQ+KA+TLL
Sbjct: 245 VLENGTLQAREHAVGALLTMCESDRCKYREPILKEGVIPGLLELTVQGTPKSQTKAQTLL 304

Query: 309 RLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQR 363
           RLLRDSPYPRSELQ DT+ENIVCNIISQIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQ+
Sbjct: 305 RLLRDSPYPRSELQPDTLENIVCNIISQIDG-DDQSSKAKKMLAEMVQVSMEQSLRHLQQ 364

[Close]

BLAST of CsaV3_5G024010 vs. TrEMBL
Match: tr|A0A061ENS0|A0A061ENS0_THECC (ARM repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_019211 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 284/341 (83.28%), Postives = 308/341 (90.32%), Query Frame = 0


Query: 22  AAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSPESHL 81
           +AV +AL L+QSD  DSK Q A EIRRLTKTSQRCRR L+ ++  LVSML R+ SPES+ 
Sbjct: 30  SAVRRALQLIQSDDSDSKLQAAKEIRRLTKTSQRCRRLLADAVIPLVSML-RVDSPESYH 89

Query: 82  EAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVXXX 141
           E+ALLALLNLAVKDEKNKI IVEAGAL P+I FL++E+L LQE ATA+LLTLSAS     
Sbjct: 90  ESALLALLNLAVKDEKNKISIVEAGALEPVISFLENENLNLQEYATAALLTLSASVNNKP 149

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCK 201
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CK
Sbjct: 150 IIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCK 209

Query: 202 KSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCE 261
           +SSKTAEKCCSLIE LVGFD+GR ALT+EEGGVLAVVEVLENG+LQ+R+HAVGALL MCE
Sbjct: 210 RSSKTAEKCCSLIESLVGFDKGRTALTAEEGGVLAVVEVLENGTLQAREHAVGALLAMCE 269

Query: 262 SDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIV 321
           SDRCKYREPILGEGVIPGLLELTVQGTPKSQ+KA+TLLRLLRDSPYPRSEL  DT+ENIV
Sbjct: 270 SDRCKYREPILGEGVIPGLLELTVQGTPKSQTKAQTLLRLLRDSPYPRSELPPDTLENIV 329

Query: 322 CNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRAL 363
           CNIISQIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQ+RAL
Sbjct: 330 CNIISQIDG-DDQSSKAKKMLAEMVQVSMEQSLRHLQQRAL 368

[Close]

BLAST of CsaV3_5G024010 vs. TrEMBL
Match: tr|A0A2K2ARY1|A0A2K2ARY1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G088800v3 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.8e-106
Identity = 258/347 (74.35%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 22  AAVLKALLLVQSDALDSKFQGASEIRRLTKTSQRCRRHLSQSIPHLVSMLHRLHSPESHL 81
           AAV +ALLL+QSD L  K + A EIRRLTKTSQRCRR L+ ++  LV ML          
Sbjct: 29  AAVCRALLLIQSDDLSLKIEAAKEIRRLTKTSQRCRRQLADAVKPLVCMLRVGDDDSVEN 88

Query: 82  EAALLALLNLAVKDEKNKIKIVEAGALGPIIGFLQSESLILQENATASLLTLSASTVXXX 141
           E+ALLALLNLAVKDEKNKI IVEAGAL  II FLQS++ ILQE ATASLLTLSAST+   
Sbjct: 89  ESALLALLNLAVKDEKNKISIVEAGALESIISFLQSQNSILQEYATASLLTLSASTINKP 148

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCK 201
                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   CK
Sbjct: 149 VISACGAIPLLVEILRNGITQAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTCK 208

Query: 202 KSSKTAEKCCSLIEYLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCE 261
           KSSKTAEKCC+LIE LVGFDEGRIALTSEEGG+LAV+EVLENGSLQSR+HAVGALLT+C+
Sbjct: 209 KSSKTAEKCCALIESLVGFDEGRIALTSEEGGILAVIEVLENGSLQSREHAVGALLTLCQ 268

Query: 262 SDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQADTIENIV 321
           SDRCKYREPIL EGVIPGLLELTVQGTPKSQSKA+TLLRLLRD+PYPRSELQ DT+ENIV
Sbjct: 269 SDRCKYREPILREGVIPGLLELTVQGTPKSQSKAQTLLRLLRDTPYPRSELQPDTLENIV 328

Query: 322 CNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALHKAKVL 369
           CNIISQIDG D+QS KAKKMLAEMVQVSMEQSLRHLQ+RAL    +L
Sbjct: 329 CNIISQIDG-DEQSGKAKKMLAEMVQVSMEQSLRHLQQRALFFTSLL 374

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140305.1	1.1e-151	100.00	PREDICTED: U-box domain-containing protein 2 [Cucumis sativus] >KGN51043.1 hypot...	[more]
XP_008460513.1	3.1e-141	96.14	PREDICTED: U-box domain-containing protein 2 isoform X1 [Cucumis melo]	[more]
XP_022992877.1	1.0e-136	93.92	U-box domain-containing protein 2-like [Cucurbita maxima]	[more]
XP_022939065.1	1.4e-136	93.92	U-box domain-containing protein 2-like [Cucurbita moschata]	[more]
XP_023550373.1	1.4e-136	93.92	U-box domain-containing protein 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G024010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03440.1	1.2e-91	60.24	ARM repeat superfamily protein	[more]
AT4G12710.1	8.1e-35	47.94	ARM repeat superfamily protein	[more]
AT5G14510.1	4.5e-17	37.58	ARM repeat superfamily protein	[more]
AT2G25130.1	5.0e-08	22.80	ARM repeat superfamily protein	[more]
AT1G27910.1	5.5e-07	32.65	plant U-box 45	[more]

BLAST of CsaV3_5G024010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C7G1\|PUB45_ARATH	9.9e-06	32.65	U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1...	[more]
sp\|Q9C7R6\|PUB17_ARATH	6.4e-05	29.13	U-box domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=PUB17 PE=2...	[more]
sp\|Q9LT79\|PUB25_ARATH	8.4e-05	35.00	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]

BLAST of CsaV3_5G024010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNA6\|A0A0A0KNA6_CUCSA	7.5e-152	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418780 PE=4 SV=1	[more]
tr\|A0A1S3CC78\|A0A1S3CC78_CUCME	2.1e-141	96.14	U-box domain-containing protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A1R3JLN7\|A0A1R3JLN7_9ROSI	5.5e-110	82.09	Armadillo OS=Corchorus olitorius OX=93759 GN=COLO4_15727 PE=4 SV=1	[more]
tr\|A0A061ENS0\|A0A061ENS0_THECC	4.3e-107	83.28	ARM repeat superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_019211 PE=4 SV=...	[more]
tr\|A0A2K2ARY1\|A0A2K2ARY1_POPTR	4.8e-106	74.35	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G088800v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR000225	Armadillo

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024010.1	CsaV3_5G024010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 136..176 e-value: 0.014 score: 24.6 coord: 220..261 e-value: 200.0 score: 3.1 coord: 95..135 e-value: 9.4 score: 13.5 coord: 177..219 e-value: 37.0 score: 8.8 coord: 52..93 e-value: 25.0 score: 10.1
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 138..175 e-value: 1.6E-4 score: 21.5
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 62..106 score: 10.797
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 147..189 score: 8.592
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 221..372 e-value: 1.0E-7 score: 33.8
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 23..217 e-value: 8.8E-28 score: 98.9
None	No IPR available	PANTHER	PTHR23315:SF65	ARM REPEAT SUPERFAMILY PROTEIN	coord: 7..363
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 7..363
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 32..331

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G024010	CSPI05G14940	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G024010	Cucsa.034840	Cucumber (Gy14) v1	cgycucB010
CsaV3_5G024010	CmaCh15G007390	Cucurbita maxima (Rimu)	cmacucB0343
CsaV3_5G024010	CmaCh04G022980	Cucurbita maxima (Rimu)	cmacucB0887
CsaV3_5G024010	CmoCh15G007630	Cucurbita moschata (Rifu)	cmocucB0337
CsaV3_5G024010	CmoCh04G024020	Cucurbita moschata (Rifu)	cmocucB0876
CsaV3_5G024010	Cp4.1LG13g05180	Cucurbita pepo (Zucchini)	cpecucB0225
CsaV3_5G024010	Cp4.1LG01g19980	Cucurbita pepo (Zucchini)	cpecucB0545
CsaV3_5G024010	CsGy5G014790	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G024010	Carg18265	Silver-seed gourd	carcucB0564
CsaV3_5G024010	Carg01467	Silver-seed gourd	carcucB0869
CsaV3_5G024010	Cla019766	Watermelon (97103) v1	cucwmB407
CsaV3_5G024010	MELO3C022845	Melon (DHL92) v3.5.1	cucmeB351
CsaV3_5G024010	ClCG03G008710	Watermelon (Charleston Gray)	cucwcgB405
CsaV3_5G024010	Lsi09G009340	Bottle gourd (USVL1VR-Ls)	cuclsiB353
CsaV3_5G024010	MELO3C022845.2	Melon (DHL92) v3.6.1	cucmedB343
CsaV3_5G024010	Cla97C03G059940	Watermelon (97103) v2	cucwmbB386
CsaV3_5G024010	Bhi12G001073	Wax gourd	cucwgoB463

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None