CmoCh04G024020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G024020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionU-box domain-containing protein 4
LocationCmo_Chr04 : 17891715 .. 17894725 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCACTTCCATTTCTCTCCTTCTCTCTCACCTCTCCACTCTCTCTCTCTCTCTTCAATTTTCAATTCTTCTTCCTCATGGATTATTATTGTACCTCTCCCGCCACCAGCTACCCCCACCACCACCGTCACCGGTCTACCGACACCGCCACCGCCACTCTGTCTCCTGAGGTCGCCGTCCACAAGGCGCTCCTGCTCGTCCAATCCGACTCCCCCGATTCCAAGTTCCAAGGCGCCTGCGAAATTCGCCGCCTCACCAAAACTTCCCAAAGCTGCCGCCGCCATCTCTCTGAATCAATCCCTCATCTCGTCTCCATGCTCCACCGTCCTCACTCCCCTGAGTCTCACCTTGAAGCTGCTCTCCTCGCTCTTCTCAACCTCGCCGTCAAAGACGAGAAGTAAATTCCTCTTAGATCTGTTTGCCTTCCTTGTGCCCTGATATCTGTTTCTTCTTTTGATGCTTTCTGGAATTTTTGATTAACTTGTTTCCTTCCTTCTGTTTATTTTAATTAATTGATTAATTGGATTAGTTAACGCTTTCCGAATTTTTTATGAACTCTGCGATTGTCTTTAGAGACTTTCTTCTTTATTCCTTTCTCTCCCTTTGTGCTTTATTATTTTTTTTTTTTTTACTTTTCTATGTCTTACGTGTTTGGCCAGTGAGGATATGCGAACGAAAATCTAATAAGAAATTTGAATAAATTTGTTCGTTGGCCAATTGGATGGCAATATCTTTCTTGGATGCCTTTAACAGAACGATTATGTTTTTAATTCATAAAGAATTTGCGAGTTTATGTTTTTAATTCTTTGTCATGTTGAGCTTCGTTTGTTGTTTTCTTTGGCTTTTGTTGCTGGAGGCTTCCCCTCCTCCCTTTTTTTAGTGTGGTTGGCATGCCACGCGGTAGTTGGGGTCTTTGATTACCCAAATTTGGCTACCTTAGAAATAAAATATGTGTTTCTTTTGTCTGTTTTGTTTTTCAAATAGAATTCCCCAGATATTTTCTTTGATGTGGGATGATGTTGATCTGTTTCCATGAGATTCTATATTGGTTAGGGAGAAGAACGAAACACTCTTTATTAGGGTGTAGAAACCTCTCCCTAGCAGACATGTTTTAAAAACTTTGAGGGAAAGCCCCGAGGACGATATCGGCTAGCGGTGGGTTCAGCGGTGGGTTTGTGTTTGAAGACATAGAAGTTGAAGGGTTTTGTAGGAAAGATGATGAACAGATGGCTTTAGTCTTTCTAAATGGAAATTCGTTTTATTTTCCTCTTAAAACTGGTTTGATTCTCTGTCATTACTGGTTTAGCTCGCTTGTCTATTACAAGTTCCTCCCTTCCCCATTGAATCATTCTTGCTATCTAAATTCAGTGGCCGACATGTCACACACTAACCAAACATACGCAAGAGTCTATGTCGGCAGTGGCAGCTCCTCTGTCACATGTGTCTGAATAAGCACATATGTGGATTTTGTCTGGTAAACGTGACATATTAAGCTCGCCCCTGTGTTGAGGATTGTTGAGAGAGGAGTCCCACATTGGCTAAGTAAGGAATACATCTCCATTGGTATGAGACCTTTTGGGAAACCAAAAGCAAAGCCACGTGATCTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTCACCCTGTTCTTTCTTTCTTCCTCATACATGACTTTCACATGGTCACGGTCACGTGCCCTGTCTTGTATCTTCTAGCACATGGGATTTATCAGTGGCTTTGAATTCCTAACAACAATCATGTTATGATGCCTACTTCTTTTAGTTTGTTGCTGATAGGTATCTGGTAATTGGTTCTATGTGTTGTGGTGACTAGTAGTACCAAACTAAGAGGCTGCTTCCTTCATATATTGATTTCTTGCATTATTCCTACAGGAATAAGATCAAGATTGTGGAAGCTGGTGCCTTGGGACCAATAATTGGTTTCTTTCAATCAGAGAGTTTGATCTTACAGGAGAATGCAACTGCATCCTTGCTTACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCTGGTGCAATTCCCCTTCTAGTAGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCGCTTTCCAATCTTTCGACGCTTCCATGTAATCTTAGCATCATTCTCGATTCGAAGCCGATCCCTTCAATAGTTAGTCTGCTGAAAACTTGTAAAAAATCTTCAAAAACAGCAGAGAAGTGCTGCTCACTGATTGAATCCTTAGTTGGTTTTGATGAAGGTAGAATAGCTTTGACATCTGAAGAAGGTGGAGTTCTTGCAGTTGTTGAAGTGCTTGAGAATGGCTCGCTTCAAAGTCGTGATCACGCTGTCGGTGCACTATTGACGATGTGTGAGAGCGACCGGTGTAAATACAGAGAGCCTATCTTAGGAGAAGGAGTTATCCCTGGCCTTCTTGAACTCACTGTCCAAGGAACACCCAAATCTCAGTCAAAGGCTAAAACACTATTGAGACTATTAAGGGACTCTCCGTATCCACGATCCGAGCTTCAACCTGACACGATTGAGAACATTGTTTGCAACATCATCTCTCAGATAGATGGAGACGACGATCAATCGAGTAAAGCGAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAGCAGAGTTTGAGGCATTTACAACGAAGGGCTCTGGTATGCACGCCTACTGATATGCCTATTAATACTTGCACCTCTGAAGTTTCTTCTAAGTAACAAAATTTGTTGTTATCATGGAGTTTGTAAGATAAAACTTTGGTAGTTGTTACTTTTAGAAAACAGGAAATGAAAATAAGATTTAGGAAAGCAAGCCAGTCCAGGCAGGTTGTGTGAGTGTCGGGAGACTGGTAAATGTCAATAAAACTGGGAATTGGATCCGTATGAGGTTGAGATCATAGTTCTTTTCTTCTTCTTCTTGCTTGTTCTGTAAAGAAACTGTTGTATTACAGTATAGAAATAGTGAAGTTTAGAA

mRNA sequence

ATTTCACTTCCATTTCTCTCCTTCTCTCTCACCTCTCCACTCTCTCTCTCTCTCTTCAATTTTCAATTCTTCTTCCTCATGGATTATTATTGTACCTCTCCCGCCACCAGCTACCCCCACCACCACCGTCACCGGTCTACCGACACCGCCACCGCCACTCTGTCTCCTGAGGTCGCCGTCCACAAGGCGCTCCTGCTCGTCCAATCCGACTCCCCCGATTCCAAGTTCCAAGGCGCCTGCGAAATTCGCCGCCTCACCAAAACTTCCCAAAGCTGCCGCCGCCATCTCTCTGAATCAATCCCTCATCTCGTCTCCATGCTCCACCGTCCTCACTCCCCTGAGTCTCACCTTGAAGCTGCTCTCCTCGCTCTTCTCAACCTCGCCGTCAAAGACGAGAAGAATAAGATCAAGATTGTGGAAGCTGGTGCCTTGGGACCAATAATTGGTTTCTTTCAATCAGAGAGTTTGATCTTACAGGAGAATGCAACTGCATCCTTGCTTACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCTGGTGCAATTCCCCTTCTAGTAGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCGCTTTCCAATCTTTCGACGCTTCCATGTAATCTTAGCATCATTCTCGATTCGAAGCCGATCCCTTCAATAGTTAGTCTGCTGAAAACTTGTAAAAAATCTTCAAAAACAGCAGAGAAGTGCTGCTCACTGATTGAATCCTTAGTTGGTTTTGATGAAGGTAGAATAGCTTTGACATCTGAAGAAGGTGGAGTTCTTGCAGTTGTTGAAGTGCTTGAGAATGGCTCGCTTCAAAGTCGTGATCACGCTGTCGGTGCACTATTGACGATGTGTGAGAGCGACCGGTGTAAATACAGAGAGCCTATCTTAGGAGAAGGAGTTATCCCTGGCCTTCTTGAACTCACTGTCCAAGGAACACCCAAATCTCAGTCAAAGGCTAAAACACTATTGAGACTATTAAGGGACTCTCCGTATCCACGATCCGAGCTTCAACCTGACACGATTGAGAACATTGTTTGCAACATCATCTCTCAGATAGATGGAGACGACGATCAATCGAGTAAAGCGAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAGCAGAGTTTGAGGCATTTACAACGAAGGGCTCTGGTATGCACGCCTACTGATATGCCTATTAATACTTGCACCTCTGAAGTTTCTTCTAAGTAACAAAATTTGTTGTTATCATGGAGTTTGTAAGATAAAACTTTGGTAGTTGTTACTTTTAGAAAACAGGAAATGAAAATAAGATTTAGGAAAGCAAGCCAGTCCAGGCAGGTTGTGTGAGTGTCGGGAGACTGGTAAATGTCAATAAAACTGGGAATTGGATCCGTATGAGGTTGAGATCATAGTTCTTTTCTTCTTCTTCTTGCTTGTTCTGTAAAGAAACTGTTGTATTACAGTATAGAAATAGTGAAGTTTAGAA

Coding sequence (CDS)

ATGGATTATTATTGTACCTCTCCCGCCACCAGCTACCCCCACCACCACCGTCACCGGTCTACCGACACCGCCACCGCCACTCTGTCTCCTGAGGTCGCCGTCCACAAGGCGCTCCTGCTCGTCCAATCCGACTCCCCCGATTCCAAGTTCCAAGGCGCCTGCGAAATTCGCCGCCTCACCAAAACTTCCCAAAGCTGCCGCCGCCATCTCTCTGAATCAATCCCTCATCTCGTCTCCATGCTCCACCGTCCTCACTCCCCTGAGTCTCACCTTGAAGCTGCTCTCCTCGCTCTTCTCAACCTCGCCGTCAAAGACGAGAAGAATAAGATCAAGATTGTGGAAGCTGGTGCCTTGGGACCAATAATTGGTTTCTTTCAATCAGAGAGTTTGATCTTACAGGAGAATGCAACTGCATCCTTGCTTACTCTATCTGCTTCTACTGTCAATAAGCCATTAATAAGTGCTGCTGGTGCAATTCCCCTTCTAGTAGAGATTCTTAGATGTGGAAGCCCACAAGCAAAGGCAGATGCTGTAATGGCGCTTTCCAATCTTTCGACGCTTCCATGTAATCTTAGCATCATTCTCGATTCGAAGCCGATCCCTTCAATAGTTAGTCTGCTGAAAACTTGTAAAAAATCTTCAAAAACAGCAGAGAAGTGCTGCTCACTGATTGAATCCTTAGTTGGTTTTGATGAAGGTAGAATAGCTTTGACATCTGAAGAAGGTGGAGTTCTTGCAGTTGTTGAAGTGCTTGAGAATGGCTCGCTTCAAAGTCGTGATCACGCTGTCGGTGCACTATTGACGATGTGTGAGAGCGACCGGTGTAAATACAGAGAGCCTATCTTAGGAGAAGGAGTTATCCCTGGCCTTCTTGAACTCACTGTCCAAGGAACACCCAAATCTCAGTCAAAGGCTAAAACACTATTGAGACTATTAAGGGACTCTCCGTATCCACGATCCGAGCTTCAACCTGACACGATTGAGAACATTGTTTGCAACATCATCTCTCAGATAGATGGAGACGACGATCAATCGAGTAAAGCGAAGAAGATGCTGGCAGAGATGGTGCAAGTAAGTATGGAGCAGAGTTTGAGGCATTTACAACGAAGGGCTCTGGTATGCACGCCTACTGATATGCCTATTAATACTTGCACCTCTGAAGTTTCTTCTAAGTAA
Homology
[Close]
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 3.2e-28
Identity = 99/297 (33.33%), Postives = 164/297 (55.22%), Query Frame = 1 

Query: 20  STDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSES--IPHL 79
           S +T       E  V K +  ++S S D++ Q   E+R L K +   R  +  S  I  L
Sbjct: 529 SNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLL 588

Query: 80  VSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENAT 139
           V +L+   S     E A+ ALLNL++ D  NK  I +AGA+ P+I   ++ S   +EN+ 
Sbjct: 589 VELLYSTDSATQ--ENAVTALLNLSINDN-NKKAIADAGAIEPLIHVLENGSSEAKENSA 648

Query: 140 ASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDS 199
           A+L +LS    NK  I  +GAI  LV++L  G+P+ K DA  AL NLS    N ++I+ S
Sbjct: 649 ATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQS 708

Query: 200 KPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQ 259
             +  ++ L+     ++   +K  +++ +L    EGR A+  +EGG+  +VEV+E GS +
Sbjct: 709 GAVRYLIDLM---DPAAGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVELGSAR 768

Query: 260 SRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD 315
            +++A  ALL +  ++  ++   +L EG +P L+ L+  GTP+++ KA+ LL   R+
Sbjct: 769 GKENAAAALLQL-STNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRN 817

[Close]
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-26
Identity = 105/308 (34.09%), Postives = 168/308 (54.55%), Query Frame = 1 

Query: 15  HHRHRSTDTAT-----ATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRH 74
           H RH     AT     ++ S E  V K +  ++S S D++ +    IR L + S   R  
Sbjct: 399 HWRHPGIIPATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIV 458

Query: 75  LS--ESIPHLVSMLHRPHSPESHLEA-ALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQ 134
           ++  E+IP LVS+L+   S +  ++A A+  LLNL++ D  NK  I E+GA+ P+I   +
Sbjct: 459 IARCEAIPSLVSLLY---STDERIQADAVTCLLNLSINDN-NKSLIAESGAIVPLIHVLK 518

Query: 135 SESLI-LQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLS 194
           +  L   + N+ A+L +LS     K  I  AGAI  LV++L  GS   K DA  AL NLS
Sbjct: 519 TGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLS 578

Query: 195 TLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVL 254
               N + ++++  +  +V L+     +    EK   ++ +L    EG+IA+  EEGG+ 
Sbjct: 579 IHHENKTKVIEAGAVRYLVELMDP---AFGMVEKAVVVLANLATVREGKIAI-GEEGGIP 638

Query: 255 AVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKA 314
            +VEV+E GS + +++A  ALL +C +   K+   ++ EGVIP L+ LT  GT + + KA
Sbjct: 639 VLVEVVELGSARGKENATAALLQLC-THSPKFCNNVIREGVIPPLVALTKSGTARGKEKA 697

[Close]
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.8e-24
Identity = 101/300 (33.67%), Postives = 157/300 (52.33%), Query Frame = 1 

Query: 18  HRSTDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSE--SIP 77
           H   D+ T T S  + + + L   +S S   K   A EIR LT  S   R H+    +I 
Sbjct: 461 HDLDDSGTMTTSHTIKLVEDL---KSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAIT 520

Query: 78  HLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQEN 137
            L+S+L+         E A+ ALLNL++  E NK  IVE GA+ P++    + +   +EN
Sbjct: 521 PLLSLLYSEEKLTQ--EHAVTALLNLSIS-ELNKAMIVEVGAIEPLVHVLNTGNDRAKEN 580

Query: 138 ATASLLTLSASTVNKPLISAA-GAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSII 197
           + ASL +LS   VN+  I  +  AI  LV +L  G+ + K DA  AL NLS    N + I
Sbjct: 581 SAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI 640

Query: 198 LDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENG 257
           + +K +  +V LL       +  +K  +L+ +L    EGR A+   EGG+  +VE ++ G
Sbjct: 641 VQAKAVKYLVELL---DPDLEMVDKAVALLANLSAVGEGRQAIV-REGGIPLLVETVDLG 700

Query: 258 SLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD 315
           S + +++A   LL +C +   K+   +L EG IP L+ L+  GT +++ KA+ LL   R+
Sbjct: 701 SQRGKENAASVLLQLCLNSP-KFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRN 749

[Close]
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 89/277 (32.13%), Postives = 148/277 (53.43%), Query Frame = 1 

Query: 41  VQSDSPDSKFQGACEIRRLTKTSQSCRRHLSES--IPHLVSMLHRPHSPESHLEAALLAL 100
           ++S + D +   A EIR L K + + R  ++E+  IP LV++L    S     E A+ AL
Sbjct: 332 LRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSS--SDPRTQEHAVTAL 391

Query: 101 LNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLTLSASTVNKPLISAAGA 160
           LNL++  E NK  IV++ A+  I+   ++ S+  +ENA A+L +LS    NK  I AAGA
Sbjct: 392 LNLSIH-ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGA 451

Query: 161 IPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAE 220
           IP L+ +L  GSP+ K DA  A+ NL     N    + +  +  +++ L     +    +
Sbjct: 452 IPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFL--VDPTGGMID 511

Query: 221 KCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYR 280
           +  SL+  L G  EG+I +   E  +  +VEV++ GS ++R++A   L  +C +D  +  
Sbjct: 512 EALSLLSILAGNPEGKIVIARSE-PIPPLVEVIKTGSPRNRENAAAILWLLCSAD-TEQT 571

Query: 281 EPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDS 316
                 GV   L EL+  GT +++ KA ++L L+  +
Sbjct: 572 LAAKAAGVEDALKELSETGTDRAKRKASSILELMHQA 601

[Close]
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.9e-21
Identity = 100/323 (30.96%), Postives = 164/323 (50.77%), Query Frame = 1 

Query: 4   YCTSPATSYPHHHRHRSTDTATATLSPEVAV--HKALLLV-----QSDSPDSKFQGACEI 63
           +CT+   SY         ++  + L  + AV  +KA + +        S  ++   A EI
Sbjct: 371 WCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVAAREI 430

Query: 64  RRLTKTSQSCRRHLSES--IPHLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVE 123
           R L KT +  R +++E+  IPHL  +L   ++     E ++ A+LNL++  EKNK +I+E
Sbjct: 431 RLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQ--ENSVTAMLNLSIY-EKNKSRIME 490

Query: 124 AG-ALGPIIGFFQSESLI-LQENATASLLTLSASTVNKPLISAAG-AIPLLVEILRCGSP 183
            G  L  I+    S   +  QENA A+L +LSA    K  I+     +  L  +L+ G+P
Sbjct: 491 EGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTP 550

Query: 184 QAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFD 243
           + K DAV AL NLST P N S +++   + S+V  L    K+   AE+    +  LV   
Sbjct: 551 RGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL----KNEGVAEEAAGALALLVRQS 610

Query: 244 EGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLL 303
            G  A+  E+  V  ++ ++  G+ + +++AV ALL +C S      E +L    I GLL
Sbjct: 611 LGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLL 670

Query: 304 E-LTVQGTPKSQSKAKTLLRLLR 314
           + L   GT +++ KA +L R+ +
Sbjct: 671 QTLLFTGTKRARRKAASLARVFQ 686

[Close]
BLAST of CmoCh04G024020 vs. TrEMBL
Match: A0A0A0KNA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G418780 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 2.2e-185
Identity = 355/388 (91.49%), Postives = 363/388 (93.56%), Query Frame = 1 

Query: 4   YCTSPATSYPHHHRHRSTDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTS 63
           YCTSP+ +   HHR  S        SP+ AV KALLLVQSD+ DSKFQGA EIRRLTKTS
Sbjct: 3   YCTSPSAT---HHRTSSAS------SPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTS 62

Query: 64  QSCRRHLSESIPHLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 123
           Q CRRHLS+SIPHLVSMLHR HSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG
Sbjct: 63  QRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 122

Query: 124 FFQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 183
           F QSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN
Sbjct: 123 FLQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 182

Query: 184 LSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGG 243
           LSTLP NLSIILDS P+P+IVSLLKTCKKSSKTAEKCCSLIE LVGFDEGRIALTSEEGG
Sbjct: 183 LSTLPHNLSIILDSNPVPAIVSLLKTCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGG 242

Query: 244 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 303
           VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS
Sbjct: 243 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 302

Query: 304 KAKTLLRLLRDSPYPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 363
           KAKTLLRLLRDSPYPRSELQ DTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS
Sbjct: 303 KAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 362

Query: 364 LRHLQRRALVCTPTDMPINTCTSEVSSK 392
           LRHLQRRALVCTPT+MPINTCTSEVSSK
Sbjct: 363 LRHLQRRALVCTPTEMPINTCTSEVSSK 381

[Close]
BLAST of CmoCh04G024020 vs. TrEMBL
Match: M5XCA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007075mg PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 8.3e-148
Identity = 292/369 (79.13%), Postives = 320/369 (86.72%), Query Frame = 1 

Query: 23  TATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVSMLH 82
           +++ T SP  AV +AL L+QSD  DSK QGA EIRRLTKTS  CRR LS S+  LVSML 
Sbjct: 17  SSSPTSSPSSAVQRALQLIQSDDQDSKLQGAQEIRRLTKTSHRCRRQLSASVGPLVSMLR 76

Query: 83  RPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLT 142
              S ESH E+ALLALLNLAVKDE NKIKIVEAGAL PII F +S+S  LQE A ASLLT
Sbjct: 77  VRDSTESH-ESALLALLNLAVKDETNKIKIVEAGALEPIISFLESQSSNLQEYAAASLLT 136

Query: 143 LSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPS 202
           LSAS VNKP+I ++GAIPLLVE LR GS QAK D+VMALSNLST P NL+IIL++KPIPS
Sbjct: 137 LSASAVNKPIIGSSGAIPLLVETLRHGSTQAKVDSVMALSNLSTHPSNLTIILEAKPIPS 196

Query: 203 IVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHA 262
           IV+LLK CKKSSKTAEKCC+LIESLVGFDEGR ALTSEEGGVLAV+EVLENGSLQSR+HA
Sbjct: 197 IVTLLKPCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGGVLAVIEVLENGSLQSREHA 256

Query: 263 VGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSEL 322
           VGALLTMC+SDRC+YRE IL +GVIPGLLELTVQGTPKSQ+KA TLL LLRDSPYPRSE 
Sbjct: 257 VGALLTMCQSDRCRYREAILKDGVIPGLLELTVQGTPKSQTKAHTLLHLLRDSPYPRSEF 316

Query: 323 QPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTPTDMPIN 382
           Q DT+ENIVCNIISQIDG DDQS KAKKMLAEMVQVSMEQSLRHLQ+RALVCTPTD+PI+
Sbjct: 317 QADTLENIVCNIISQIDG-DDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTDLPIS 376

Query: 383 TCTSEVSSK 392
           TCTSEVS K
Sbjct: 377 TCTSEVSLK 383

[Close]
BLAST of CmoCh04G024020 vs. TrEMBL
Match: A0A061ENS0_THECC (ARM repeat superfamily protein OS=Theobroma cacao GN=TCM_019211 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 3.1e-147
Identity = 290/360 (80.56%), Postives = 322/360 (89.44%), Query Frame = 1 

Query: 33  AVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVSMLHRPHSPESHLE 92
           AV +AL L+QSD  DSK Q A EIRRLTKTSQ CRR L++++  LVSML R  SPES+ E
Sbjct: 31  AVRRALQLIQSDDSDSKLQAAKEIRRLTKTSQRCRRLLADAVIPLVSML-RVDSPESYHE 90

Query: 93  AALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLTLSASTVNKPL 152
           +ALLALLNLAVKDEKNKI IVEAGAL P+I F ++E+L LQE ATA+LLTLSAS  NKP+
Sbjct: 91  SALLALLNLAVKDEKNKISIVEAGALEPVISFLENENLNLQEYATAALLTLSASVNNKPI 150

Query: 153 ISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSLLKTCKK 212
           I A GAIPLLV+ILR GS QAK DAVMALSNLST P N+ +IL++ PIPSIVSLLKTCK+
Sbjct: 151 IGALGAIPLLVDILRHGSTQAKVDAVMALSNLSTHPDNVKMILETSPIPSIVSLLKTCKR 210

Query: 213 SSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCES 272
           SSKTAEKCCSLIESLVGFD+GR ALT+EEGGVLAVVEVLENG+LQ+R+HAVGALL MCES
Sbjct: 211 SSKTAEKCCSLIESLVGFDKGRTALTAEEGGVLAVVEVLENGTLQAREHAVGALLAMCES 270

Query: 273 DRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQPDTIENIVC 332
           DRCKYREPILGEGVIPGLLELTVQGTPKSQ+KA+TLLRLLRDSPYPRSEL PDT+ENIVC
Sbjct: 271 DRCKYREPILGEGVIPGLLELTVQGTPKSQTKAQTLLRLLRDSPYPRSELPPDTLENIVC 330

Query: 333 NIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTPTDMPI-NTCTSEVSSK 392
           NIISQIDG DDQSSKAKKMLAEMVQVSMEQSLRHLQ+RALVCTPTD+PI ++CTSEVS K
Sbjct: 331 NIISQIDG-DDQSSKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTDLPISSSCTSEVSLK 388

[Close]
BLAST of CmoCh04G024020 vs. TrEMBL
Match: A0A067FIS5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015988mg PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.3e-145
Identity = 290/372 (77.96%), Postives = 321/372 (86.29%), Query Frame = 1 

Query: 20  STDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVS 79
           S+  ++++ S   AVH+AL L+QSD PD K + A EIRRLTKTSQ CRR L++++  LV 
Sbjct: 30  SSSFSSSSSSASSAVHRALHLIQSDDPDLKLEAAREIRRLTKTSQRCRRQLAQAVQPLVL 89

Query: 80  MLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATAS 139
           ML    +P+S  E+ALLALLNLAVKDEKNKIKIVEAGAL PII F QS  L LQE A A+
Sbjct: 90  MLR---APDSDHESALLALLNLAVKDEKNKIKIVEAGALEPIISFLQSPDLNLQEYAAAA 149

Query: 140 LLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKP 199
           LLTLSAS+VNKP ISA+GAIPLLVEILR GS QAK DAVMALSNLST P NLSIIL + P
Sbjct: 150 LLTLSASSVNKPFISASGAIPLLVEILRYGSQQAKFDAVMALSNLSTHPDNLSIILGTNP 209

Query: 200 IPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSR 259
           IPSIV LL  CKKSSKTAEKC SLIESLVGFDEGRI LTSEEGGVLAVVEVLENGSLQ+R
Sbjct: 210 IPSIVDLLIFCKKSSKTAEKCTSLIESLVGFDEGRIVLTSEEGGVLAVVEVLENGSLQAR 269

Query: 260 DHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPR 319
           +HAVGALL MC+SDRCKYREPIL EGVIPGLLELT+QGTPKSQ+KA+TLL+LLRDSPYPR
Sbjct: 270 EHAVGALLMMCQSDRCKYREPILREGVIPGLLELTIQGTPKSQTKARTLLQLLRDSPYPR 329

Query: 320 SELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTPTDM 379
           SELQPDT+ENIVCNIISQIDG D+QS KAKKMLAEMVQVSMEQSLRHLQ+RALVCTP D+
Sbjct: 330 SELQPDTLENIVCNIISQIDG-DEQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPADL 389

Query: 380 PINTCTSEVSSK 392
           PI + TSEVSSK
Sbjct: 390 PIASVTSEVSSK 397

[Close]
BLAST of CmoCh04G024020 vs. TrEMBL
Match: A0A151U9C1_CAJCA (U-box domain-containing protein 4 OS=Cajanus cajan GN=KK1_020136 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.9e-145
Identity = 286/360 (79.44%), Postives = 317/360 (88.06%), Query Frame = 1 

Query: 32  VAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVSMLHRPHSPESHL 91
           +AV +AL L+ S  PD + Q A +IRRLTKTS  CRR L+E++  LVSML R  SPESH 
Sbjct: 31  LAVRRALQLLSSGDPDLRLQAARDIRRLTKTSHRCRRQLAEAVGPLVSML-RVDSPESH- 90

Query: 92  EAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLTLSASTVNKP 151
           E ALLALLNLAVKDEKNKI IVEAGAL PII F +S+   LQE+ATASLLTLSAS+ NKP
Sbjct: 91  EPALLALLNLAVKDEKNKISIVEAGALEPIISFLKSQHQNLQESATASLLTLSASSTNKP 150

Query: 152 LISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSLLKTCK 211
           +ISA GAIPLLVEILR GSPQAKADAVMALSNLST P NL IIL++ PIP IV L+KTCK
Sbjct: 151 IISACGAIPLLVEILRDGSPQAKADAVMALSNLSTYPNNLGIILETNPIPFIVDLIKTCK 210

Query: 212 KSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCE 271
           KSSKTAEKCC+LIESLV +DEGR ALTSEEGGVLAVVEVLE+G+LQSR+HAVGALLTMC+
Sbjct: 211 KSSKTAEKCCALIESLVEYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQ 270

Query: 272 SDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQPDTIENIV 331
           SDRCKYREPIL EGVIPGLLELTVQGTPKSQ+KA+TLL+LLR+SPYPRSE+QPDT+ENIV
Sbjct: 271 SDRCKYREPILREGVIPGLLELTVQGTPKSQTKARTLLQLLRESPYPRSEIQPDTLENIV 330

Query: 332 CNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTPTDMPINTCTSEVSSK 391
           CNIISQIDG DDQS KAKKMLAEMVQVSMEQSLRHLQ+RALVCTP+D+PI  C SEVSSK
Sbjct: 331 CNIISQIDG-DDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSSK 387

[Close]
BLAST of CmoCh04G024020 vs. TAIR10
Match: AT3G03440.1 (AT3G03440.1 ARM repeat superfamily protein)

HSP 1 Score: 432.2 bits (1110), Expect = 3.5e-121
Identity = 243/352 (69.03%), Postives = 287/352 (81.53%), Query Frame = 1 

Query: 21  TDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVSM 80
           + + + + S   ++ + L L++S+  DS+   A EIRRLTKTS  CRRH S+++  LVSM
Sbjct: 53  SSSVSVSSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSM 112

Query: 81  LHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASL 140
           L R  SPESH EAALLALLNLAVKDEKNK+ I+EAGAL PII F QS S  LQE A+ASL
Sbjct: 113 L-RFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASL 172

Query: 141 LTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPI 200
           LTLSAS  NKP+I A G +PLLV++++ GSPQAKADAVMALSNLSTLP NLS+IL +KP+
Sbjct: 173 LTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPL 232

Query: 201 PSIVSLLKTCKKSSKTAEKCCSLIESL-VGFDEGRIALTSEEGGVLAVVEVLENGSLQSR 260
             I++LLK+ KKSSKT+EKCCSLIE+L V  +E R  L S+EGGVLAVVEVLENGSLQ+R
Sbjct: 233 SPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAR 292

Query: 261 DHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPR 320
           +HAVG LLT+C+SDR KYREPIL EGVIPGLLELTVQGT KS+ KA+ LL LLR+S  PR
Sbjct: 293 EHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPR 352

Query: 321 SELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRA 372
           SE+QPDTIENIV ++IS IDG DDQS KAKKMLAEMVQVSME+SLRHLQ RA
Sbjct: 353 SEVQPDTIENIVSSLISHIDG-DDQSGKAKKMLAEMVQVSMEKSLRHLQERA 402

[Close]
BLAST of CmoCh04G024020 vs. TAIR10
Match: AT4G12710.1 (AT4G12710.1 ARM repeat superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-67
Identity = 163/361 (45.15%), Postives = 232/361 (64.27%), Query Frame = 1 

Query: 20  STDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTS---QSCRRHLSES--I 79
           +T     T    + +H +  L+  D  D + + A EIR+L + S    S R  L+++  I
Sbjct: 34  TTTNTWKTTKELLILHLSKKLLHGDL-DFRIEAAKEIRKLLRKSPVKSSARSKLADAGVI 93

Query: 80  PHLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQE 139
           P LV ML   +    H  A+LLALLNLAV++E+NKI+IV+AGA+ P+I   +  +  L+E
Sbjct: 94  PPLVPMLFSSNVDARH--ASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRE 153

Query: 140 NATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSII 199
            ATA++LTLSA+  NK +I ++G  PLL+++L  G+ Q K DAV AL NLS      + I
Sbjct: 154 LATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPI 213

Query: 200 LDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDE-GRIALTSEEGGVLAVVEVLEN 259
           LD+K +  ++ LLK CKK SK AEK  +L+E ++   E GR A+TS E G+L +VE +E+
Sbjct: 214 LDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVED 273

Query: 260 GSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLR 319
           GS  S +HAVGALL++C SDR KYR+ IL EG IPGLL  TV GT KS+ +A+ LL LLR
Sbjct: 274 GSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLR 333

Query: 320 DSPYPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALV 375
           ++P  + E+ P T+E IV  I  Q+DG +  +  AKK+L +MV  SME S++ +Q +A  
Sbjct: 334 ETPREK-EMTPLTLEKIVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQHKAAS 390

[Close]
BLAST of CmoCh04G024020 vs. TAIR10
Match: AT5G14510.1 (AT5G14510.1 ARM repeat superfamily protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 111/320 (34.69%), Postives = 185/320 (57.81%), Query Frame = 1 

Query: 43  SDSPDSKFQGACEIRRLTKTSQSCRRHLSES--IPHLVSMLHRPHSPESHLEAALLALLN 102
           S + +S+ + A E   LT  S+  R+ L+E   I  L+SML       +  E AL ALL+
Sbjct: 11  SGNRESQIEAAIE---LTNLSRKQRQKLAEREIISPLLSMLQSQDCITT--EVALSALLS 70

Query: 103 LAVKDEKNKIKIVEAGALGPIIGFFQSES-LILQENATASLLTLSASTVNKPLISAAGAI 162
           LA   E+NK++IV++GA+  ++   QSE+ +++ E A A LL LS+   NK  +++   +
Sbjct: 71  LAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLV 130

Query: 163 PLLVEILRCG--SPQAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTA 222
            LLV ++     + QAK D +  L NLSTL   + +++ S    +++ ++  C KSS+ A
Sbjct: 131 QLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELA 190

Query: 223 EKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGALLTMCESDRCKY 282
           +K  +L+E+++      ++  S  G +  +VE +E GS Q ++HAVG LL +C +DR   
Sbjct: 191 DKAVALLENIISHSPESVS--SIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNNDRETN 250

Query: 283 REPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSELQPDTIENIVCNIISQ 342
           R  IL EGV+PGLL+++V GT +++  A+ LL LLRD      + +   IE IV  I+ +
Sbjct: 251 RGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLRDCSGYVIKNKQSKIE-IVEQIMRE 310

Query: 343 IDGDDDQ-SSKAKKMLAEMV 357
           ID + ++      K++ EM+
Sbjct: 311 IDQEGERIPGTMLKLVEEMI 322

[Close]
BLAST of CmoCh04G024020 vs. TAIR10
Match: AT2G23140.1 (AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29
Identity = 99/297 (33.33%), Postives = 164/297 (55.22%), Query Frame = 1 

Query: 20  STDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSES--IPHL 79
           S +T       E  V K +  ++S S D++ Q   E+R L K +   R  +  S  I  L
Sbjct: 532 SNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLL 591

Query: 80  VSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENAT 139
           V +L+   S     E A+ ALLNL++ D  NK  I +AGA+ P+I   ++ S   +EN+ 
Sbjct: 592 VELLYSTDSATQ--ENAVTALLNLSINDN-NKKAIADAGAIEPLIHVLENGSSEAKENSA 651

Query: 140 ASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDS 199
           A+L +LS    NK  I  +GAI  LV++L  G+P+ K DA  AL NLS    N ++I+ S
Sbjct: 652 ATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQS 711

Query: 200 KPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQ 259
             +  ++ L+     ++   +K  +++ +L    EGR A+  +EGG+  +VEV+E GS +
Sbjct: 712 GAVRYLIDLM---DPAAGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVELGSAR 771

Query: 260 SRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRD 315
            +++A  ALL +  ++  ++   +L EG +P L+ L+  GTP+++ KA+ LL   R+
Sbjct: 772 GKENAAAALLQL-STNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRN 820

[Close]
BLAST of CmoCh04G024020 vs. TAIR10
Match: AT3G01400.1 (AT3G01400.1 ARM repeat superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26
Identity = 100/294 (34.01%), Postives = 155/294 (52.72%), Query Frame = 1 

Query: 29  SPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSES--IPHLVSMLHRPHS 88
           S ++  H    L  S S D + Q A EIR L+K     R  ++++  I  L+S++    S
Sbjct: 60  SDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISS--S 119

Query: 89  PESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLTLSAS 148
                E  + A+LNL++ DE NK  I  +GA+ P++   +  +   +ENA  +LL LS  
Sbjct: 120 DLQLQEYGVTAILNLSLCDE-NKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQI 179

Query: 149 TVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPSIVSL 208
             NK  I  +GAIPLLV +L  G  +AK DA  AL +L +   N    + S  +  +V L
Sbjct: 180 EENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVEL 239

Query: 209 LKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHAVGAL 268
           +      S   +K   ++  L+   E + A+  EEGGV  +VE++E G+ + ++ AV  L
Sbjct: 240 M--ADFGSNMVDKSAFVMSLLMSVPESKPAIV-EEGGVPVLVEIVEVGTQRQKEMAVSIL 299

Query: 269 LTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRS 321
           L +CE +   YR  +  EG IP L+ L+  GT +++ KA+ L+ LLR    PRS
Sbjct: 300 LQLCE-ESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQ---PRS 343

[Close]
BLAST of CmoCh04G024020 vs. NCBI nr
Match: gi|659121132|ref|XP_008460513.1| (PREDICTED: U-box domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 669.1 bits (1725), Expect = 4.8e-189
Identity = 358/388 (92.27%), Postives = 367/388 (94.59%), Query Frame = 1 

Query: 4   YCTSPATSYPHHHRHRSTDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTS 63
           YCTSP+ +  HHHR       TA  SP+ A+HKALLLVQSD+ DSKFQGACEIRRLTKTS
Sbjct: 3   YCTSPSAT--HHHR------TTAASSPDAALHKALLLVQSDALDSKFQGACEIRRLTKTS 62

Query: 64  QSCRRHLSESIPHLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 123
           Q CRRHLS+SIPHLVSMLHR HSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG
Sbjct: 63  QRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 122

Query: 124 FFQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 183
           F QSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN
Sbjct: 123 FLQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 182

Query: 184 LSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGG 243
           LSTLP NLSIILDS P+P+IVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGG
Sbjct: 183 LSTLPHNLSIILDSNPVPAIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGG 242

Query: 244 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 303
           VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS
Sbjct: 243 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 302

Query: 304 KAKTLLRLLRDSPYPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 363
           KAKTLLRLLRDSPYPRSELQ DTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS
Sbjct: 303 KAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 362

Query: 364 LRHLQRRALVCTPTDMPINTCTSEVSSK 392
           LRHLQRRALVCTPT+MPIN CTSEVSSK
Sbjct: 363 LRHLQRRALVCTPTEMPINACTSEVSSK 382

[Close]
BLAST of CmoCh04G024020 vs. NCBI nr
Match: gi|449445088|ref|XP_004140305.1| (PREDICTED: U-box domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 656.4 bits (1692), Expect = 3.2e-185
Identity = 355/388 (91.49%), Postives = 363/388 (93.56%), Query Frame = 1 

Query: 4   YCTSPATSYPHHHRHRSTDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTS 63
           YCTSP+ +   HHR  S        SP+ AV KALLLVQSD+ DSKFQGA EIRRLTKTS
Sbjct: 3   YCTSPSAT---HHRTSSAS------SPDAAVLKALLLVQSDALDSKFQGASEIRRLTKTS 62

Query: 64  QSCRRHLSESIPHLVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 123
           Q CRRHLS+SIPHLVSMLHR HSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG
Sbjct: 63  QRCRRHLSQSIPHLVSMLHRLHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIG 122

Query: 124 FFQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 183
           F QSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN
Sbjct: 123 FLQSESLILQENATASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSN 182

Query: 184 LSTLPCNLSIILDSKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGG 243
           LSTLP NLSIILDS P+P+IVSLLKTCKKSSKTAEKCCSLIE LVGFDEGRIALTSEEGG
Sbjct: 183 LSTLPHNLSIILDSNPVPAIVSLLKTCKKSSKTAEKCCSLIEYLVGFDEGRIALTSEEGG 242

Query: 244 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 303
           VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS
Sbjct: 243 VLAVVEVLENGSLQSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQS 302

Query: 304 KAKTLLRLLRDSPYPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 363
           KAKTLLRLLRDSPYPRSELQ DTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS
Sbjct: 303 KAKTLLRLLRDSPYPRSELQADTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQS 362

Query: 364 LRHLQRRALVCTPTDMPINTCTSEVSSK 392
           LRHLQRRALVCTPT+MPINTCTSEVSSK
Sbjct: 363 LRHLQRRALVCTPTEMPINTCTSEVSSK 381

[Close]
BLAST of CmoCh04G024020 vs. NCBI nr
Match: gi|657978761|ref|XP_008381322.1| (PREDICTED: U-box domain-containing protein 4-like [Malus domestica])

HSP 1 Score: 544.7 bits (1402), Expect = 1.4e-151
Identity = 298/375 (79.47%), Postives = 330/375 (88.00%), Query Frame = 1 

Query: 17  RHRSTDTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPH 76
           R+ + D+ ++T S   AVH+AL L+QSD  DSK QGA EIRRLTKTSQ CRR LS+S+  
Sbjct: 10  RNSTXDSPSSTFSSSSAVHRALQLIQSDDQDSKLQGAQEIRRLTKTSQRCRRQLSDSVGP 69

Query: 77  LVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENA 136
           LVSML    SPESH E+ALLALLNLAVKDE NKIKIVEAGAL PII F QS+S  LQE A
Sbjct: 70  LVSMLRVCDSPESH-ESALLALLNLAVKDETNKIKIVEAGALEPIITFLQSQSCNLQECA 129

Query: 137 TASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILD 196
           TA+LLTLSAS +NKP+I A+GAIPLLVEILR G+PQAK D+VMALSNLST P NLSIIL+
Sbjct: 130 TAALLTLSASAINKPVIGASGAIPLLVEILRHGAPQAKVDSVMALSNLSTHPANLSIILE 189

Query: 197 SKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSL 256
           +KPIPSIVSLLK CKKSSKTAEKCC+LIESLVGFDEGR ALTSEEGGVLAV+EVLENGSL
Sbjct: 190 AKPIPSIVSLLKPCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGGVLAVIEVLENGSL 249

Query: 257 QSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSP 316
           QSR+HAV ALLTMC+SDRC+YRE IL +GVIPGLLELTVQGTPKSQ+KA TLLRLLRDSP
Sbjct: 250 QSREHAVSALLTMCQSDRCRYREAILKDGVIPGLLELTVQGTPKSQTKAHTLLRLLRDSP 309

Query: 317 YPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTP 376
           YPRS+LQ DT+ENIVCNIISQID  DDQS+KAKKMLAEMVQVSMEQSLRHLQ+RALVCT 
Sbjct: 310 YPRSDLQADTLENIVCNIISQID-SDDQSNKAKKMLAEMVQVSMEQSLRHLQQRALVCTS 369

Query: 377 TDMPINTCTSEVSSK 392
           TD+PI+TCTSEVS K
Sbjct: 370 TDLPISTCTSEVSLK 382

[Close]
BLAST of CmoCh04G024020 vs. NCBI nr
Match: gi|694392657|ref|XP_009371797.1| (PREDICTED: U-box domain-containing protein 4 [Pyrus x bretschneideri])

HSP 1 Score: 539.3 bits (1388), Expect = 5.7e-150
Identity = 298/375 (79.47%), Postives = 328/375 (87.47%), Query Frame = 1 

Query: 18  HRST-DTATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPH 77
           H ST D+ ++T S   AVH+AL L+QSD  DSK QGA EIRRLTKTSQ CRR LS+S+  
Sbjct: 10  HNSTPDSPSSTFSSSSAVHRALQLIQSDDQDSKLQGAQEIRRLTKTSQRCRRQLSDSVGP 69

Query: 78  LVSMLHRPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENA 137
           LVSML    SPESH E+ALLALLNLAVKDE NKIKIVEAGAL PII F  S+S  LQE A
Sbjct: 70  LVSMLRVCGSPESH-ESALLALLNLAVKDETNKIKIVEAGALEPIITFLPSQSCNLQEYA 129

Query: 138 TASLLTLSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILD 197
           TA+LLTLSAS VNKP+I A+GAIPLLVEILR G+PQAK D+VMALSNLST P NLSIIL+
Sbjct: 130 TAALLTLSASAVNKPVIGASGAIPLLVEILRHGTPQAKVDSVMALSNLSTHPANLSIILE 189

Query: 198 SKPIPSIVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSL 257
           +KPIPSIVSLLK CKKSSKTAEKCC+LIESLVGFDEGR ALTSEEGGVLAV+EVLENGSL
Sbjct: 190 AKPIPSIVSLLKPCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGGVLAVIEVLENGSL 249

Query: 258 QSRDHAVGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSP 317
           QSR+HAV ALLTMC+SDRC+YRE IL +GVIPGLLELTVQGTPKSQ+KA  LLRLLRDSP
Sbjct: 250 QSREHAVSALLTMCKSDRCRYREAILKDGVIPGLLELTVQGTPKSQTKAHMLLRLLRDSP 309

Query: 318 YPRSELQPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTP 377
           YPRSELQ DT+ENIVCNIISQID  D+QSSKAKKMLA+MVQVSMEQSLRHLQ+RALVCT 
Sbjct: 310 YPRSELQADTLENIVCNIISQID-SDEQSSKAKKMLADMVQVSMEQSLRHLQQRALVCTS 369

Query: 378 TDMPINTCTSEVSSK 392
           TD+P++TCTSEVS K
Sbjct: 370 TDLPVSTCTSEVSLK 382

[Close]
BLAST of CmoCh04G024020 vs. NCBI nr
Match: gi|645246160|ref|XP_008229225.1| (PREDICTED: U-box domain-containing protein 4 [Prunus mume])

HSP 1 Score: 538.9 bits (1387), Expect = 7.4e-150
Identity = 294/369 (79.67%), Postives = 324/369 (87.80%), Query Frame = 1 

Query: 23  TATATLSPEVAVHKALLLVQSDSPDSKFQGACEIRRLTKTSQSCRRHLSESIPHLVSMLH 82
           +++ T SP  AV +AL L+QSD+ DSK QGA EIRRLTKTS  CRR LS S+  LV+ML 
Sbjct: 17  SSSPTSSPSSAVQRALQLIQSDNQDSKLQGAQEIRRLTKTSHRCRRQLSASVGPLVAMLR 76

Query: 83  RPHSPESHLEAALLALLNLAVKDEKNKIKIVEAGALGPIIGFFQSESLILQENATASLLT 142
            P S ESH E+ALLALLNLAVKDE NKIKIVEAGAL PII F +S+S  LQE A ASLLT
Sbjct: 77  VPDSTESH-ESALLALLNLAVKDETNKIKIVEAGALEPIISFLESQSSNLQEYAAASLLT 136

Query: 143 LSASTVNKPLISAAGAIPLLVEILRCGSPQAKADAVMALSNLSTLPCNLSIILDSKPIPS 202
           LSAS VNKP+I ++GAIPLLVE LR GSPQAK D+VMALSNLST P NL+IIL++KPIPS
Sbjct: 137 LSASAVNKPIIGSSGAIPLLVETLRHGSPQAKVDSVMALSNLSTHPSNLTIILEAKPIPS 196

Query: 203 IVSLLKTCKKSSKTAEKCCSLIESLVGFDEGRIALTSEEGGVLAVVEVLENGSLQSRDHA 262
           IV+LLK CKKSSKTAEKCC+LIESLVGFDEGR ALTSEEGGVLAV+EVLENGSLQSR+HA
Sbjct: 197 IVTLLKPCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGGVLAVIEVLENGSLQSREHA 256

Query: 263 VGALLTMCESDRCKYREPILGEGVIPGLLELTVQGTPKSQSKAKTLLRLLRDSPYPRSEL 322
           VGALLTMC+SDRC+YRE IL +GVIPGLLELTVQGTPKSQ+KA TLL LLRDSPYPRSEL
Sbjct: 257 VGALLTMCQSDRCRYREAILKDGVIPGLLELTVQGTPKSQTKAHTLLHLLRDSPYPRSEL 316

Query: 323 QPDTIENIVCNIISQIDGDDDQSSKAKKMLAEMVQVSMEQSLRHLQRRALVCTPTDMPIN 382
           Q DT+ENIVCNIISQIDG DDQS KAKKMLAEMVQVSMEQSLRHLQ+RALVCTPTD+PI+
Sbjct: 317 QADTLENIVCNIISQIDG-DDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTDLPIS 376

Query: 383 TCTSEVSSK 392
           TCTSEVS K
Sbjct: 377 TCTSEVSLK 383

The following BLAST results are available for this feature:
BLAST of CmoCh04G024020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB4_ARATH3.2e-2833.33U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3[more]
PUB2_ARATH4.0e-2634.09U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1[more]
PUB3_ARATH2.8e-2433.67U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2[more]
PUB12_ORYSJ1.7e-2132.13U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2... [more]
PUB17_ARATH2.9e-2130.96U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=2 SV=1[more]
BLAST of CmoCh04G024020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNA6_CUCSA2.2e-18591.49Uncharacterized protein OS=Cucumis sativus GN=Csa_5G418780 PE=4 SV=1[more]
M5XCA8_PRUPE8.3e-14879.13Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007075mg PE=4 SV=1[more]
A0A061ENS0_THECC3.1e-14780.56ARM repeat superfamily protein OS=Theobroma cacao GN=TCM_019211 PE=4 SV=1[more]
A0A067FIS5_CITSI2.3e-14577.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015988mg PE=4 SV=1[more]
A0A151U9C1_CAJCA2.9e-14579.44U-box domain-containing protein 4 OS=Cajanus cajan GN=KK1_020136 PE=4 SV=1[more]
BLAST of CmoCh04G024020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G03440.13.5e-12169.03 ARM repeat superfamily protein[more]
AT4G12710.12.2e-6745.15 ARM repeat superfamily protein[more]
AT5G14510.11.2e-3334.69 ARM repeat superfamily protein[more]
AT2G23140.11.8e-2933.33 RING/U-box superfamily protein with ARM repeat domain[more]
AT3G01400.13.2e-2634.01 ARM repeat superfamily protein[more]
BLAST of CmoCh04G024020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121132|ref|XP_008460513.1|4.8e-18992.27PREDICTED: U-box domain-containing protein 4 [Cucumis melo][more]
gi|449445088|ref|XP_004140305.1|3.2e-18591.49PREDICTED: U-box domain-containing protein 2 [Cucumis sativus][more]
gi|657978761|ref|XP_008381322.1|1.4e-15179.47PREDICTED: U-box domain-containing protein 4-like [Malus domestica][more]
gi|694392657|ref|XP_009371797.1|5.7e-15079.47PREDICTED: U-box domain-containing protein 4 [Pyrus x bretschneideri][more]
gi|645246160|ref|XP_008229225.1|7.4e-15079.67PREDICTED: U-box domain-containing protein 4 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0005488 binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G024020.1CmoCh04G024020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloPFAMPF00514Armcoord: 148..185
score: 1.
IPR000225ArmadilloSMARTSM00185arm_5coord: 146..186
score: 0.014coord: 63..103
score: 22.0coord: 105..145
score: 23.0coord: 230..271
score: 2
IPR000225ArmadilloPROFILEPS50176ARM_REPEATcoord: 72..116
score: 11
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 25..315
score: 1.1
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 38..355
score: 1.93
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 33..388
score: 2.5E
NoneNo IPR availablePANTHERPTHR23315:SF65ARM REPEAT SUPERFAMILY PROTEINcoord: 33..388
score: 2.5E