CsaV3_5G023010 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G023010
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	chr5 : 17061938 .. 17063609 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCACCTCACCCACATACCCATATCTCCCACACCCATAATAATTGGATTCCATTCCCCCCCCTCCCCCTCCCTCTTTCTTCTTCTTCTTTTTTTTTTTATTCATTTCATTATTTAATTTAAAGAAAAAAAAAAAAAGTGTTAAGTTGCTATATATATTCCATCCCCCTGAGACCCTCAATTTCCATTCATTTCAATCCAAACCCCAAATCTCTCTCTTATTTCCTATTTCCTTCCATCTCTCTCTCTTAAAACTCAATTACAGAATTCAAATTAATTTTATAAAGAAAAGAAACTGATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACCCCATTACTCTTCCACTCATCGCCCTCGGCTACGGCGGAAGCAGAATCCCGTAAACTTCCATCTTCCCGTTTCAAAGGAGTTGTCCCTCAGCCCAACGGCCGATGGGGTGCTCAGATTTACGAGAAACACCAAAGAGTGTGGCTCGGCACTTTCAATGAAGAAAACGATGCCGCCAAGGCTTACGATATCGCCGCCCTTCGCTTCCGTGGACGCGATGCCGTCACCAACTTCAAACCCTCCCTCAACCACGACCACGACAACGCCCTCGAGGCCGACTTCCTCAACTCCCATTCCAAGTTGGAGATTGTGGACATGCTCCGTAAACACACCTACAATGAGGAGCTCCAACAGAGCAAGCGGCAGCAGCGGGGGGCGATGGCAGTTGATTCGGGGTCGTTCCCCCATTACCCGGGGTCGGATTCAAACCGGGAAGTGCTGTTTGAGAAAACGGTGACGCCAAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCTATGGAAGAGGGAGTGGTTTCGGGGAAGGGAATGCTTTTGAATTTTGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACGAAAGGATGGAGCCGATTCGTCAAAGACAACACTCTCAGAGCCGGAGATGTGGTTCGCTTTCTCCGCTCTACTGGACCAGATAAGCAGCTTTACATTCATGCTAACCCCATCAGTGCACCGGGAATTAACCCAGTTCATGTTGTTAAGCTTTTTGGAGTCAATATTTTGCAACTGCCGGTGGGGAAGACAGAAGGGGCATTCTTGGAATTACAACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAATACATATTCAATTTAATTACCTTTTTCCTTTTTTCTTTTTCTTGCCAAGTTGCGCAACCTGACTTGTATTAACCCAAAACAAAACAATAACATTTTTTTTAATCTCTTTATTTATGCCTTTTAATTTTCTTAATCAATTGCTTATAATATTTACCCTTTTTTTAACCATTAAATTCTTTTTCTTTTCTTCAAATTTTGAGTTGGGTTATTAAATGACTGCAAATGGATCTAAAATATTATCCAAATGGTTAGATATTTTATGGACTTGGAATAATACCCTTCTCAATCAATGTATTGGATCAACCAATAAGTGCACCTTAACTACTTAATTAGCTAAAAGTATATGTCTTAGGATATATGATTTTGTTTCAAAAGTCAAATTTTTATAGTTCAACTAATAGCAATAATAAGAATAATGAG

mRNA sequence

ATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACCCCATTACTCTTCCACTCATCGCCCTCGGCTACGGCGGAAGCAGAATCCCGTAAACTTCCATCTTCCCGTTTCAAAGGAGTTGTCCCTCAGCCCAACGGCCGATGGGGTGCTCAGATTTACGAGAAACACCAAAGAGTGTGGCTCGGCACTTTCAATGAAGAAAACGATGCCGCCAAGGCTTACGATATCGCCGCCCTTCGCTTCCGTGGACGCGATGCCGTCACCAACTTCAAACCCTCCCTCAACCACGACCACGACAACGCCCTCGAGGCCGACTTCCTCAACTCCCATTCCAAGTTGGAGATTGTGGACATGCTCCGTAAACACACCTACAATGAGGAGCTCCAACAGAGCAAGCGGCAGCAGCGGGGGGCGATGGCAGTTGATTCGGGGTCGTTCCCCCATTACCCGGGGTCGGATTCAAACCGGGAAGTGCTGTTTGAGAAAACGGTGACGCCAAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCTATGGAAGAGGGAGTGGTTTCGGGGAAGGGAATGCTTTTGAATTTTGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACGAAAGGATGGAGCCGATTCGTCAAAGACAACACTCTCAGAGCCGGAGATGTGGTTCGCTTTCTCCGCTCTACTGGACCAGATAAGCAGCTTTACATTCATGCTAACCCCATCAGTGCACCGGGAATTAACCCAGTTCATGTTGTTAAGCTTTTTGGAGTCAATATTTTGCAACTGCCGGTGGGGAAGACAGAAGGGGCATTCTTGGAATTACAACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAA

Coding sequence (CDS)

ATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACCCCATTACTCTTCCACTCATCGCCCTCGGCTACGGCGGAAGCAGAATCCCGTAAACTTCCATCTTCCCGTTTCAAAGGAGTTGTCCCTCAGCCCAACGGCCGATGGGGTGCTCAGATTTACGAGAAACACCAAAGAGTGTGGCTCGGCACTTTCAATGAAGAAAACGATGCCGCCAAGGCTTACGATATCGCCGCCCTTCGCTTCCGTGGACGCGATGCCGTCACCAACTTCAAACCCTCCCTCAACCACGACCACGACAACGCCCTCGAGGCCGACTTCCTCAACTCCCATTCCAAGTTGGAGATTGTGGACATGCTCCGTAAACACACCTACAATGAGGAGCTCCAACAGAGCAAGCGGCAGCAGCGGGGGGCGATGGCAGTTGATTCGGGGTCGTTCCCCCATTACCCGGGGTCGGATTCAAACCGGGAAGTGCTGTTTGAGAAAACGGTGACGCCAAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCTATGGAAGAGGGAGTGGTTTCGGGGAAGGGAATGCTTTTGAATTTTGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACGAAAGGATGGAGCCGATTCGTCAAAGACAACACTCTCAGAGCCGGAGATGTGGTTCGCTTTCTCCGCTCTACTGGACCAGATAAGCAGCTTTACATTCATGCTAACCCCATCAGTGCACCGGGAATTAACCCAGTTCATGTTGTTAAGCTTTTTGGAGTCAATATTTTGCAACTGCCGGTGGGGAAGACAGAAGGGGCATTCTTGGAATTACAACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAA

Protein sequence

MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGAFLELQQPTKKQRIIKPL

Homology

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BLAST of CsaV3_5G023010 vs. NCBI nr
Match: XP_004151060.1 (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis sativus])

HSP 1 Score: 639.8 bits (1649), Expect = 4.9e-180
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK 120
           YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVGKL 180
           LEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVGKL
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240
           NRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240

Query: 241 VKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGA 300
           VKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGA
Sbjct: 241 VKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGA 300

Query: 301 FLELQQPTKKQRIIKPL 318
           FLELQQPTKKQRIIKPL
Sbjct: 301 FLELQQPTKKQRIIKPL 317

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BLAST of CsaV3_5G023010 vs. NCBI nr
Match: XP_008465773.1 (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo] >AML83922.1 RAV1 [Cucumis melo])

HSP 1 Score: 619.4 bits (1596), Expect = 6.8e-174
Identity = 309/321 (96.26%), Postives = 313/321 (97.51%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK 120
           YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHD+ALEADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHY----PGSDSNREVLFEKTVTPSD 180
           LEIVDMLRKHTYNEELQQSKR QRGAMAVDSGSFPHY     GSDS REVLFEKTVTPSD
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTPSD 180

Query: 181 VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 240
           VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG
Sbjct: 181 VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 240

Query: 241 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGK 300
           WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPI+APGI PVHVVKLFGVNILQLPVGK
Sbjct: 241 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPVGK 300

Query: 301 TEGAFLELQQPTKKQRIIKPL 318
           TEGAFLELQQPTKKQR+IKPL
Sbjct: 301 TEGAFLELQQPTKKQRVIKPL 321

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BLAST of CsaV3_5G023010 vs. NCBI nr
Match: XP_022922118.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 257/327 (78.59%), Postives = 275/327 (84.10%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES  SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSH 120
           QIYEKHQRVWLGTFN+E+ AA AYDIAALRFRGRDAVTNFK   + D  +A+E +FLNSH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 120

Query: 121 SKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVG 180
           SKLEIVDMLRKHTYNEEL+QSKR QRGA+A  + +  H+ G DS REVLFEKTVTPSDVG
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKR-QRGAIAA-ANTAVHHSGVDSKREVLFEKTVTPSDVG 180

Query: 181 KLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240
           KLNRLVIPKQHAEKNFPM EGV SGKGMLLN EDMGGKVWRFRYSYWNSSQSYVLTKGWS
Sbjct: 181 KLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240

Query: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQ--LPVG- 300
           RFVK+ +LRAGDVVRFLRSTG DKQLYI     S  G+  VHVVKLFGVNIL+  LPVG 
Sbjct: 241 RFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLPVGR 300

Query: 301 -----KTEGAFLELQQPTKKQRIIKPL 318
                K +G  LEL QP+KKQRIIK L
Sbjct: 301 CGGEPKNQGVLLEL-QPSKKQRIIKAL 324

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BLAST of CsaV3_5G023010 vs. NCBI nr
Match: XP_022974368.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 2.9e-132
Identity = 260/328 (79.27%), Postives = 279/328 (85.06%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES+ SDSTSISP+TPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 26  MDASSIDESSGSDSTSISPITPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 85

Query: 61  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDN-ALEADFLNS 120
           QIYEKHQRVWLGTFN+E+ AA AYDIAALRFRGRDAVTNFK SL+ D DN A+E +FLNS
Sbjct: 86  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFK-SLDDDDDNDAMEGEFLNS 145

Query: 121 HSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDV 180
           HSKLEIVDMLRKHTYNEELQQSKR QRGA+A  + +  H+ G DS REVLFEKTVTPSDV
Sbjct: 146 HSKLEIVDMLRKHTYNEELQQSKR-QRGAIAA-ANTPVHHSGVDSKREVLFEKTVTPSDV 205

Query: 181 GKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGW 240
           GKLNRLVIPKQHAEKNFP  EG+ SGKGMLLN EDMGGKVWRFRYSYWNSSQSYVLTKGW
Sbjct: 206 GKLNRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGW 265

Query: 241 SRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQ--LPVG 300
           SRFVK+ +LRAGDVVRFLRSTG DKQLYI    IS  G+  VHVVKLFGVNIL+  LPVG
Sbjct: 266 SRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLPVG 325

Query: 301 ------KTEGAFLELQQPTKKQRIIKPL 318
                 K +G  LEL QP+KKQRIIK L
Sbjct: 326 RCGGEPKNQGVLLEL-QPSKKQRIIKAL 349

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BLAST of CsaV3_5G023010 vs. NCBI nr
Match: XP_023549821.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126
Identity = 250/335 (74.63%), Postives = 272/335 (81.19%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES+ SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSH 120
           QIYEKHQRVWLGTFN+E+ AA AYDIAALRFRGRDAVTNFK   + D ++ +E +FL SH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120

Query: 121 SKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDSNREVLFEKTVTPSDVG 180
           SK+EIVDMLRKHTYNEEL+Q KR QRGA+A  + +  H+ GSDS REVLFEKTVTPSDVG
Sbjct: 121 SKMEIVDMLRKHTYNEELEQRKR-QRGAIAA-ANTAVHHSGSDSKREVLFEKTVTPSDVG 180

Query: 181 KLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240
           KLNRLVIPKQHAEKNFPM EGV SGKGMLLN EDMGGKVWRFRYSYWNSSQSYVLT+GWS
Sbjct: 181 KLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWS 240

Query: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGI--------NPVHVVKLFGVNIL 300
           RFVK+ +LRAGDVVRFLRSTG DKQLYI    IS  G+              KLFGVNIL
Sbjct: 241 RFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVXXXXXXXXXXXXXXKLFGVNIL 300

Query: 301 Q--LPVG------KTEGAFLELQQPTKKQRIIKPL 318
           +  LPVG      K +G  LEL QP+KKQRIIK L
Sbjct: 301 EVPLPVGRCGGEPKNQGVLLEL-QPSKKQRIIKAL 332

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BLAST of CsaV3_5G023010 vs. TAIR10
Match: AT1G13260.1 (related to ABI3/VP1 1)

HSP 1 Score: 342.8 bits (878), Expect = 2.2e-94
Identity = 192/313 (61.34%), Postives = 223/313 (71.25%), Query Frame = 0


Query: 1   MDASSIDESTAS-----DSTSISP-----VTPLLFHSSPSAT-------AEAESRKLPSS 60
           M++SS+DEST S     ++ +I+P     V  L    S S+         EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLN 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE++AA+AYD+A  RFR RDAVTNFK  + 
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFK-DVK 120

Query: 121 HDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDS- 180
            D D   E DFLNSHSK EIVDMLRKHTYNEEL+QSKR++ G   +          +D  
Sbjct: 121 MDED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGV 180

Query: 181 ------NREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGK 240
                 + E LFEK VTPSDVGKLNRLVIPK HAEK+FP+    VS KG+LLNFED+ GK
Sbjct: 181 STTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGI 290
           VWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RS G D+QLYI     S   +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDL 300

[Close]

BLAST of CsaV3_5G023010 vs. TAIR10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein)

HSP 1 Score: 335.1 bits (858), Expect = 4.7e-92
Identity = 179/280 (63.93%), Postives = 205/280 (73.21%), Query Frame = 0


Query: 34  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRD 93
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 94  AVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGS 153
           AVTNFK  ++    N  E+ FL++HSK EIVDMLRKHTY +E +QS+R+        SG 
Sbjct: 121 AVTNFKSQVD---GNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGL 180

Query: 154 FPHYPGSDS---NREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVS-------G 213
                G+D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP+     +        
Sbjct: 181 ETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPT 240

Query: 214 KGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQ 273
           KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTGPD+Q
Sbjct: 241 KGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQ 300

Query: 274 LYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGAFLE 304
           LYIH    S+P      VV+LFGVNI  +   K     +E
Sbjct: 301 LYIHWKVRSSP---VQTVVRLFGVNIFNVSNEKPNDVAVE 334

[Close]

BLAST of CsaV3_5G023010 vs. TAIR10
Match: AT1G68840.1 (related to ABI3/VP1 2)

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-90
Identity = 178/276 (64.49%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 29  PSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALR 88
           P    E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE+ +AA++YDIAA R
Sbjct: 49  PENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACR 108

Query: 89  FRGRDAVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMA 148
           FRGRDAV NFK  L  D D A    FL +HSK EIVDMLRKHTY +EL+Q+ ++Q   ++
Sbjct: 109 FRGRDAVVNFKNVL-EDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQL-FLS 168

Query: 149 VDSGSFPHYPGSDSN------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-EEGVV 208
           VD+    +   +  N      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+      
Sbjct: 169 VDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPA 228

Query: 209 SGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPD 268
             KG+L+NFED+ GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTG +
Sbjct: 229 VTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLE 288

Query: 269 KQLYIHANPISAPGINPVH-VVKLFGVNILQLPVGK 297
           +QLYI     S P  NPV  VV+LFGV+I  +   K
Sbjct: 289 RQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVK 318

[Close]

BLAST of CsaV3_5G023010 vs. TAIR10
Match: AT3G25730.1 (ethylene response DNA binding factor 3)

HSP 1 Score: 322.8 bits (826), Expect = 2.4e-88
Identity = 195/339 (57.52%), Postives = 226/339 (66.67%), Query Frame = 0


Query: 1   MDA-SSIDE-STASDS----TSISPVTPLLFHSSPSAT-----------AEAESRKLPSS 60
           MDA SS+DE ST +DS     S SP + L    S ++             EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLN 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE++AA+AYD+AA RFRGRDAVTNFK +  
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 HDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRG----AMAVDSGSFPHYPG 180
            +     E +FLN+HSK EIVDMLRKHTY EEL Q KR + G      A    S     G
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 SDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEG--VVSGKGMLLNFEDMGGKV 240
                E+LFEKTVTPSDVGKLNRLVIPK  AEK+FP+  G   VS KGMLLNFED+ GKV
Sbjct: 181 F-KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGIN 300
           WRFRYSYWNSSQSYVLTKGWSRFVK+  L AGD++ F RS   D++ +I     S   + 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLE 300

Query: 301 PVHVVKLFGVNIL--QLPVGKTEGAFLELQQPTKKQRII 315
              V++LFGV+I    + V K     L      KKQR++
Sbjct: 301 TGRVMRLFGVDISLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of CsaV3_5G023010 vs. TAIR10
Match: AT1G50680.1 (AP2/B3 transcription factor family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 97/261 (37.16%), Postives = 140/261 (53.64%), Query Frame = 0


Query: 19  PVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDA 78
           P   L+  SSP     + + K     +KGVV Q NG WGAQIY  H+R+WLGTF   ++A
Sbjct: 7   PENALVVSSSPKTVVASGNVK-----YKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEA 66

Query: 79  AKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQ 138
           A AYD A+++ R  DA  N   +         E DF N ++   +++M+R  +Y  + + 
Sbjct: 67  ATAYDSASIKLRSFDA--NSHRNFPWSTITLNEPDFQNCYTTETVLNMIRDGSYQHKFRD 126

Query: 139 SKRQQRGAMAVDSGSFPHYPGSDSNRE--------VLFEKTVTPSDVGKLNRLVIPKQHA 198
             R +   +A  +   P     + N+E         LF+K +TPSDVGKLNRLVIPK++A
Sbjct: 127 FLRIRSQIVASINIGGPKQARGEVNQESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYA 186

Query: 199 EKNFPM--------EEGVVSG--KGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 258
            K  P         EEG + G  + + + F D   + W+FRY YW SSQS+V T+GW+ F
Sbjct: 187 VKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSF 246

Query: 259 VKDNTLRAGDVVRFLRSTGPD 262
           VK+  L+  DV+ F     P+
Sbjct: 247 VKEKNLKEKDVIAFYTCDVPN 260

[Close]

BLAST of CsaV3_5G023010 vs. Swiss-Prot
Match: sp|Q9ZWM9|RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.0e-93
Identity = 192/313 (61.34%), Postives = 223/313 (71.25%), Query Frame = 0


Query: 1   MDASSIDESTAS-----DSTSISP-----VTPLLFHSSPSAT-------AEAESRKLPSS 60
           M++SS+DEST S     ++ +I+P     V  L    S S+         EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLN 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE++AA+AYD+A  RFR RDAVTNFK  + 
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFK-DVK 120

Query: 121 HDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSDS- 180
            D D   E DFLNSHSK EIVDMLRKHTYNEEL+QSKR++ G   +          +D  
Sbjct: 121 MDED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGV 180

Query: 181 ------NREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGK 240
                 + E LFEK VTPSDVGKLNRLVIPK HAEK+FP+    VS KG+LLNFED+ GK
Sbjct: 181 STTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGI 290
           VWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RS G D+QLYI     S   +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDL 300

[Close]

BLAST of CsaV3_5G023010 vs. Swiss-Prot
Match: sp|Q9C6M5|RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 8.4e-91
Identity = 179/280 (63.93%), Postives = 205/280 (73.21%), Query Frame = 0


Query: 34  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRD 93
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 94  AVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGS 153
           AVTNFK  ++    N  E+ FL++HSK EIVDMLRKHTY +E +QS+R+        SG 
Sbjct: 121 AVTNFKSQVD---GNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGL 180

Query: 154 FPHYPGSDS---NREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVS-------G 213
                G+D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP+     +        
Sbjct: 181 ETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPT 240

Query: 214 KGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQ 273
           KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTGPD+Q
Sbjct: 241 KGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQ 300

Query: 274 LYIHANPISAPGINPVHVVKLFGVNILQLPVGKTEGAFLE 304
           LYIH    S+P      VV+LFGVNI  +   K     +E
Sbjct: 301 LYIHWKVRSSP---VQTVVRLFGVNIFNVSNEKPNDVAVE 334

[Close]

BLAST of CsaV3_5G023010 vs. Swiss-Prot
Match: sp|P82280|RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-89
Identity = 178/276 (64.49%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 29  PSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALR 88
           P    E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE+ +AA++YDIAA R
Sbjct: 49  PENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACR 108

Query: 89  FRGRDAVTNFKPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMA 148
           FRGRDAV NFK  L  D D A    FL +HSK EIVDMLRKHTY +EL+Q+ ++Q   ++
Sbjct: 109 FRGRDAVVNFKNVL-EDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQL-FLS 168

Query: 149 VDSGSFPHYPGSDSN------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-EEGVV 208
           VD+    +   +  N      REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+      
Sbjct: 169 VDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPA 228

Query: 209 SGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPD 268
             KG+L+NFED+ GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTG +
Sbjct: 229 VTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLE 288

Query: 269 KQLYIHANPISAPGINPVH-VVKLFGVNILQLPVGK 297
           +QLYI     S P  NPV  VV+LFGV+I  +   K
Sbjct: 289 RQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVK 318

[Close]

BLAST of CsaV3_5G023010 vs. Swiss-Prot
Match: sp|Q9LS06|RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.3e-87
Identity = 195/339 (57.52%), Postives = 226/339 (66.67%), Query Frame = 0


Query: 1   MDA-SSIDE-STASDS----TSISPVTPLLFHSSPSAT-----------AEAESRKLPSS 60
           MDA SS+DE ST +DS     S SP + L    S ++             EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLN 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE++AA+AYD+AA RFRGRDAVTNFK +  
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 HDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRG----AMAVDSGSFPHYPG 180
            +     E +FLN+HSK EIVDMLRKHTY EEL Q KR + G      A    S     G
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 SDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEG--VVSGKGMLLNFEDMGGKV 240
                E+LFEKTVTPSDVGKLNRLVIPK  AEK+FP+  G   VS KGMLLNFED+ GKV
Sbjct: 181 F-KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGIN 300
           WRFRYSYWNSSQSYVLTKGWSRFVK+  L AGD++ F RS   D++ +I     S   + 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLE 300

Query: 301 PVHVVKLFGVNIL--QLPVGKTEGAFLELQQPTKKQRII 315
              V++LFGV+I    + V K     L      KKQR++
Sbjct: 301 TGRVMRLFGVDISLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of CsaV3_5G023010 vs. Swiss-Prot
Match: sp|Q8RZX9|Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.0e-84
Identity = 171/282 (60.64%), Postives = 199/282 (70.57%), Query Frame = 0


Query: 39  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNF 98
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E+DAA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 99  KPSLNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGA--------MAVD 158
           +P    D D A E  FL + SK E+VDMLRKHTY +EL QSKR    +         ++ 
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 159 SG--SFPHYP-GSDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSG--KG 218
           +G  S P  P    + R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP++     G  KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 219 MLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLR---STGPDK 278
           +LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 279 QLYIH-----------ANPISAPGINPVHVVKLFGVNILQLP 294
           +L+I            A+P   P  +PV  V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of CsaV3_5G023010 vs. TrEMBL
Match: tr|A0A1S3CPL6|A0A1S3CPL6_CUCME (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo OX=3656 GN=LOC103503374 PE=2 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 4.5e-174
Identity = 309/321 (96.26%), Postives = 313/321 (97.51%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK 120
           YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHD+ALEADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHY----PGSDSNREVLFEKTVTPSD 180
           LEIVDMLRKHTYNEELQQSKR QRGAMAVDSGSFPHY     GSDS REVLFEKTVTPSD
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTPSD 180

Query: 181 VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 240
           VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG
Sbjct: 181 VGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 240

Query: 241 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGK 300
           WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPI+APGI PVHVVKLFGVNILQLPVGK
Sbjct: 241 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPVGK 300

Query: 301 TEGAFLELQQPTKKQRIIKPL 318
           TEGAFLELQQPTKKQR+IKPL
Sbjct: 301 TEGAFLELQQPTKKQRVIKPL 321

[Close]

BLAST of CsaV3_5G023010 vs. TrEMBL
Match: tr|A0A2G9I1N7|A0A2G9I1N7_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03590 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 9.3e-103
Identity = 216/353 (61.19%), Postives = 247/353 (69.97%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSAT----------------AEAESRKLPSSR 60
           MD SS+DEST +DS SI+P +       P +                  EAESRKLPSSR
Sbjct: 1   MDGSSVDESTTTDSISITPPSNSPPTKPPESLCRVGSGASVIVDSENGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNH 120
           FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA+AYD AA RFRGRDAVTNFK  L  
Sbjct: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDTAAQRFRGRDAVTNFKTLL-- 120

Query: 121 DHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPHYPGSD--- 180
           + ++ +EA FLNSHSK EIVDMLRKHTYN+EL+QS+R   G  A   G F    G D   
Sbjct: 121 EKEDEIEAAFLNSHSKAEIVDMLRKHTYNDELEQSRRNYGGNRAAKDGIFSFSSGGDRAA 180

Query: 181 SNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFR 240
             RE LFEK VTPSDVGKLNRLVIPKQHAEK+FP++ G  S KG+LLNFED GGKVWRFR
Sbjct: 181 KAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGNTS-KGILLNFEDSGGKVWRFR 240

Query: 241 YSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIH---ANPISAPG-IN 300
           YSYWNSSQSYVLTKGWSRFVK+  LRAGD+V F RSTGP+KQLYI     N  S PG ++
Sbjct: 241 YSYWNSSQSYVLTKGWSRFVKEKNLRAGDIVSFQRSTGPEKQLYIDWKARNNGSVPGPVH 300

Query: 301 PVHVVKLFGVNILQLP--------VGKTEG-AFLELQ----QPTKKQRIIKPL 318
           PV +V+LFGVNI + P         G   G   +E++      +KKQR+I  L
Sbjct: 301 PVQMVRLFGVNIFEGPRNGGPVAIDGSCSGKRMIEMELLGLNSSKKQRVINAL 350

[Close]

BLAST of CsaV3_5G023010 vs. TrEMBL
Match: tr|F6HFQ2|F6HFQ2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03070 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.6e-102
Identity = 218/358 (60.89%), Postives = 252/358 (70.39%), Query Frame = 0


Query: 1   MDASSIDESTASD--STSISPVTPLLFHSSP----------------SATAEAESRKLPS 60
           MD S IDEST SD  STS+  ++ L    SP                 ++ EAESRKLPS
Sbjct: 21  MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 80

Query: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSL 120
           SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AAKAYDIAA RFRGRDAVTNFKP L
Sbjct: 81  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKP-L 140

Query: 121 NHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKR----QQRGAMAVDSGSFPHYP 180
           +   ++ +EA FLNSHSK EIVDMLRKHTYN+EL+QSKR       G  +   G    + 
Sbjct: 141 SETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPF- 200

Query: 181 GSD---SNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGG 240
           GSD    +RE LFEKTVTPSDVGKLNRLVIPKQHAEK+FP++ G  S KG+LLNFEDMGG
Sbjct: 201 GSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTS-KGVLLNFEDMGG 260

Query: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAP- 300
           KVWRFRYSYWNSSQSYVLTKGWSRFVK+  L+AGD+V F RSTG DKQLYI     + P 
Sbjct: 261 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPT 320

Query: 301 ----GINPVHVVKLFGVNILQLPVGK----------TEGAFLELQ----QPTKKQRII 315
                + PV +V+LFGVNI ++PV            T    +E++    + +KKQR+I
Sbjct: 321 NQINPVEPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQRVI 375

[Close]

BLAST of CsaV3_5G023010 vs. TrEMBL
Match: tr|A5C258|A5C258_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032171 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.6e-102
Identity = 211/327 (64.53%), Postives = 240/327 (73.39%), Query Frame = 0


Query: 1   MDASSIDESTASD--STSISPVTPLLFHSSP----------------SATAEAESRKLPS 60
           MD S IDEST SD  STS+  ++ L    SP                 ++ EAESRKLPS
Sbjct: 1   MDGSCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPS 60

Query: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSL 120
           SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AAKAYDIAA RFRGRDAVTNFKP L
Sbjct: 61  SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKP-L 120

Query: 121 NHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKR----QQRGAMAVDSGSFPHYP 180
           +   ++ +EA FLNSHSK EIVDMLRKHTYN+EL+QSKR       G  +   G    + 
Sbjct: 121 SETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPF- 180

Query: 181 GSD---SNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGG 240
           GSD    +RE LFEKTVTPSDVGKLNRLVIPKQHAEK+FP++ G  S KG+LLNFEDMGG
Sbjct: 181 GSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTS-KGVLLNFEDMGG 240

Query: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAP- 298
           KVWRFRYSYWNSSQSYVLTKGWSRFVK+  L+AGD+V F RSTG DKQLYI     + P 
Sbjct: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPT 300

[Close]

BLAST of CsaV3_5G023010 vs. TrEMBL
Match: tr|W8CWZ4|W8CWZ4_OLEEU (Tempranillo OS=Olea europaea OX=4146 GN=TEM PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 8.7e-101
Identity = 213/360 (59.17%), Postives = 252/360 (70.00%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPV---TPLLFHSSPSAT----------------AEAESRKLP 60
           MD SSI EST SDS S++P+   + L    SP +                  EAESRKLP
Sbjct: 1   MDTSSIGESTTSDSISMAPISAASTLPVTKSPESLCRVGSGSSAIIDAEVGVEAESRKLP 60

Query: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPS 120
           SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE++AAKAYDIAA RFRGRDAVTNFKP 
Sbjct: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKP- 120

Query: 121 LNHDHDNALEADFLNSHSKLEIVDMLRKHTYNEELQQSKRQQ-----RGAMAVD-SGSFP 180
           L+   ++ +E  FLNSHSK EIVDMLRKHTY++EL+QS++        G   ++  G F 
Sbjct: 121 LSETEEDDVETAFLNSHSKAEIVDMLRKHTYSDELEQSRKNYGLFDGSGQRIMNKDGLFS 180

Query: 181 HYPGSD---SNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFED 240
            + G D    +RE LFEK VTPSDVGKLNRLVIPKQHAEK+FP++ G  + KG+LLNFED
Sbjct: 181 SFGGGDRAVKSREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLKSG-NNSKGVLLNFED 240

Query: 241 MGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPIS 300
           MGGKVWRFRYSYWNSSQSYVLTKGWSRFVK+  L+AGD+V F RSTGPD QLYI   P +
Sbjct: 241 MGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGPDNQLYIDWKPRN 300

Query: 301 APGI-------NPVHVVKLFGVNILQLPVGKT--------EGAFLELQQPTKKQRIIKPL 318
              +        P+ +V+LFGVNI ++P  ++        E   L L + TKKQR+I  L
Sbjct: 301 GSNVVGLPVPAQPIPMVRLFGVNIFEVPSNESCSTGKRMREMELLAL-ECTKKQRVIDAL 357

The following BLAST results are available for this feature:

BLAST of CsaV3_5G023010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151060.1	4.9e-180	100.00	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucu...	[more]
XP_008465773.1	6.8e-174	96.26	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucu...	[more]
XP_022922118.1	2.2e-132	78.59	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]
XP_022974368.1	2.9e-132	79.27	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]
XP_023549821.1	1.1e-126	74.63	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo ...	[more]

BLAST of CsaV3_5G023010 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13260.1	2.2e-94	61.34	related to ABI3/VP1 1	[more]
AT1G25560.1	4.7e-92	63.93	AP2/B3 transcription factor family protein	[more]
AT1G68840.1	1.5e-90	64.49	related to ABI3/VP1 2	[more]
AT3G25730.1	2.4e-88	57.52	ethylene response DNA binding factor 3	[more]
AT1G50680.1	1.6e-39	37.16	AP2/B3 transcription factor family protein	[more]

BLAST of CsaV3_5G023010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZWM9\|RAV1_ARATH	4.0e-93	61.34	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
sp\|Q9C6M5\|RAVL1_ARATH	8.4e-91	63.93	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
sp\|P82280\|RAV2_ARATH	2.7e-89	64.49	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
sp\|Q9LS06\|RAVL4_ARATH	4.3e-87	57.52	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
sp\|Q8RZX9\|Y1934_ORYSJ	2.0e-84	60.64	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of CsaV3_5G023010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPL6\|A0A1S3CPL6_CUCME	4.5e-174	96.26	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]
tr\|A0A2G9I1N7\|A0A2G9I1N7_9LAMI	9.3e-103	61.19	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03590 P...	[more]
tr\|F6HFQ2\|F6HFQ2_VITVI	1.6e-102	60.89	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03070 PE=4 SV=...	[more]
tr\|A5C258\|A5C258_VITVI	4.6e-102	64.53	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032171 PE=4 SV=1	[more]
tr\|W8CWZ4\|W8CWZ4_OLEEU	8.7e-101	59.17	Tempranillo OS=Olea europaea OX=4146 GN=TEM PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR015300	DNA-bd_pseudobarrel_sf
IPR036955	AP2/ERF_dom_sf
IPR003340	B3_DNA-bd
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G023010.1	CsaV3_5G023010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 45..56 score: 33.94 coord: 81..101 score: 51.0
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 44..105 e-value: 9.1E-30 score: 114.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 43..91 e-value: 3.6E-7 score: 30.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 44..99 score: 19.888
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 43..101 e-value: 1.49348E-25 score: 96.1866
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 168..270 e-value: 1.4E-24 score: 97.7
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 168..266 e-value: 4.9E-28 score: 96.8
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 168..270 score: 14.113
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 167..267 e-value: 2.55265E-29 score: 107.799
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 43..101 e-value: 7.3E-19 score: 69.4
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 159..273 e-value: 7.2E-45 score: 153.6
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 165..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..162
None	No IPR available	PANTHER	PTHR31140:SF9	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED	coord: 34..296
None	No IPR available	PANTHER	PTHR31140	FAMILY NOT NAMED	coord: 34..296
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 43..100

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G023010	CmaCh04G020120	Cucurbita maxima (Rimu)	cmacucB0877
CsaV3_5G023010	Cp4.1LG01g17620	Cucurbita pepo (Zucchini)	cpecucB0530
CsaV3_5G023010	CsGy5G013930	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G023010	MELO3C003002	Melon (DHL92) v3.5.1	cucmeB351
CsaV3_5G023010	ClCG03G009860	Watermelon (Charleston Gray)	cucwcgB405
CsaV3_5G023010	Lsi09G010220	Bottle gourd (USVL1VR-Ls)	cuclsiB349
CsaV3_5G023010	MELO3C003002.2	Melon (DHL92) v3.6.1	cucmedB343
CsaV3_5G023010	Cla97C03G060820	Watermelon (97103) v2	cucwmbB386

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G023010	Wax gourd	cucwgoB463
CsaV3_5G023010	Wild cucumber (PI 183967)	cpicucB284