Cp4.1LG01g17620 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g17620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	AP2/B3 transcription factor family protein
Location	Cp4.1LG01 : 13371389 .. 13372369 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

mRNA sequence

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

Coding sequence (CDS)

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

Protein sequence

MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIVKAL

Homology

[Close]

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.0e-92
Identity = 190/298 (63.76%), Postives = 213/298 (71.48%), Query Frame = 1


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           +AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RD
Sbjct: 51  EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRD 110

Query: 100 AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRY--GGGTTTTTT 159
           AVTNFK           E DFLNSHSK EIVDMLRKHTYN+E++QSKR   G G  T T 
Sbjct: 111 AVTNFKDVKMDED----EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTL 170

Query: 160 AAAAHSLQNAASESDR--EVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGI 219
             +  S    ++   R  E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KG+
Sbjct: 171 LTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGV 230

Query: 220 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 279
           LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI
Sbjct: 231 LLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI 290

Query: 280 DGKP---GGVKAVQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIVKA 326
             K      + A +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 291 GWKSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.7e-92
Identity = 191/305 (62.62%), Postives = 213/305 (69.84%), Query Frame = 1


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 100 AVTNFKPGAFSSVDAA-FEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA 159
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R         + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 160 AAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGS 219
               +  N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G     
Sbjct: 181 LETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSP 240

Query: 220 TKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDK 279
           TKG+L+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD+
Sbjct: 241 TKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDR 300

Query: 280 KLYIDGKPGGVKAVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERTKKQR 327
           +LYI  K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ 
Sbjct: 301 QLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQA 360

[Close]

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 9.4e-90
Identity = 193/339 (56.93%), Postives = 227/339 (66.96%), Query Frame = 1


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSSSSCPPG------VPYDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP + L    S +S          V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAAS 180
                  E +FLN+HSK EIVDMLRKHTY +E+ Q KR   G    TTA A  S+     
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSTKGILLNFEDMGGKLW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+W
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG---VKA 300
           RFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K      ++ 
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIV 324
            +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 GRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-89
Identity = 191/326 (58.59%), Postives = 216/326 (66.26%), Query Frame = 1


Query: 29  SSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAY 88
           SS    P    + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++Y
Sbjct: 43  SSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSY 102

Query: 89  DIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS--- 148
           DIAA RFRGRDAV NFK       D A    FL +HSK EIVDMLRKHTY DE++Q+   
Sbjct: 103 DIAACRFRGRDAVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKR 162

Query: 149 ----------KRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIP 208
                     KR G  TT           QN      REVLFEK VTPSDVGKLNRLVIP
Sbjct: 163 QLFLSVDANGKRNGSSTT-----------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 222

Query: 209 KQHAEKNFPL-GEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKT 268
           KQHAEK+FPL       TKG+L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK 
Sbjct: 223 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 282

Query: 269 LRAGDVVRFLRSTGPDKKLYIDGK----PGGVKAVQVVKLFGVNILEVP-------VGWC 327
           LRAGDVV F RSTG +++LYID K    P       VV+LFGV+I  V        V  C
Sbjct: 283 LRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVC 342

[Close]

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.4e-85
Identity = 176/282 (62.41%), Postives = 203/282 (71.99%), Query Frame = 1


Query: 45  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 104
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E  AA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 105 KPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTT---TTTTAAAA 164
           +P A +  DAA E  FL + SK E+VDMLRKHTY DE+ QSKR    +T    TTTA+ +
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 165 HSLQNA-----ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP--LGEGMGSTKG 224
           +   ++     A  + R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP  L    G +KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 225 ILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLR---STGPDK 284
           +LLNFED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 285 KLYIDGK-----------PGGVKA---VQVVKLFGVNILEVP 300
           KL+ID K           P    A   V+ V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of Cp4.1LG01g17620 vs. TrEMBL
Match: V7BDZ9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G102800g PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 7.5e-102
Identity = 219/368 (59.51%), Postives = 252/368 (68.48%), Query Frame = 1


Query: 1   MDTTSSLDDSAA-SDSTSVSP---VTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVP 60
           MD  SS D++   SDS S+ P     PL+   S    P  V  +AESRKLPSS++KGVVP
Sbjct: 1   MDAGSSTDETTTTSDSLSLPPNQSPPPLIRVGSGGVDPDAVSGEAESRKLPSSKYKGVVP 60

Query: 61  QPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAF 120
           QPNGRWGAQIYEKHQRVWLGTFN E +AA+AYDIAA RFRGRDAVTNFKP A +  DA  
Sbjct: 61  QPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLAGAGDDA-- 120

Query: 121 EADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVL 180
           E++FLNSHSK EIVDMLRKHTY+DE+QQS R G         AA  +   A     RE L
Sbjct: 121 ESEFLNSHSKSEIVDMLRKHTYDDELQQSTRCG-----RRRRAAEAASSGAFDPQAREQL 180

Query: 181 FEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS----------TKGILLNFEDMGGKL 240
           FEKTVTPSDVGKLNRLVIPKQHAEK+FPL  G GS           KG+LLNFED+GGK+
Sbjct: 181 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLSTGSGSGVSLCTAAAAAKGVLLNFEDVGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK-------- 300
           WRFRYSYWNSSQSYVLTKGWSRFVKE  LRAGD VRF +STGPD++LYID K        
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKENNLRAGDAVRFFKSTGPDRQLYIDCKARSSGGIC 300

Query: 301 ------PGG--------VKAVQVVKLFGVNILEVP------VGWCGKRDREGLSELERTK 327
                  GG        V+ VQ+V+LFGVN+L++P      VG+ GKR    L   E +K
Sbjct: 301 ELNNNNAGGLFVPVGPVVEQVQMVRLFGVNLLKLPGSDGVRVGYEGKRKEMELFAFECSK 360

[Close]

BLAST of Cp4.1LG01g17620 vs. TrEMBL
Match: B9SEJ0_RICCO (DNA-binding protein RAV1, putative OS=Ricinus communis GN=RCOM_0705620 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.2e-101
Identity = 217/375 (57.87%), Postives = 251/375 (66.93%), Query Frame = 1


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVP--------------------YDAESR 64
           S +D+S  SDS S++P + +    SS+  P   P                     +AESR
Sbjct: 4   SCIDESTTSDSISITPTSNI--SPSSNPLPSKSPESPLCRVGSGTSVVLDSESGIEAESR 63

Query: 65  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 124
           KLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDA+TNF
Sbjct: 64  KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAITNF 123

Query: 125 KPGA--FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAH 184
           KP A    S +   E  FLNSHSK EIVDMLRKHTYNDE++QSKR       T+      
Sbjct: 124 KPQATDHQSEEDEIETAFLNSHSKAEIVDMLRKHTYNDELEQSKR-----NYTSNNGRGD 183

Query: 185 SLQNAASESD-------------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGM 244
             QN  + ++             RE LFEK VTPSDVGKLNRLVIPKQHAEK+FPL  G 
Sbjct: 184 KFQNRTNMNNVGLSGSERIIMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS 243

Query: 245 GSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGP 304
            STKG+LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGD+VRFL+STGP
Sbjct: 244 NSTKGVLLNFEDITGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGP 303

Query: 305 DKKLYIDGKPG------------GVKAVQVVKLFGVNILEVP-----VGWCGKRDRE-GL 327
           DK+LYID K               V+ VQ+V+LFGVNI +VP      G  GKR RE  L
Sbjct: 304 DKQLYIDWKVRTLTPTVSNPVVCSVQPVQMVRLFGVNIFKVPGNSHIEGCNGKRIREMEL 363

[Close]

BLAST of Cp4.1LG01g17620 vs. TrEMBL
Match: W8CWZ4_OLEEU (Tempranillo OS=Olea europaea GN=TEM PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100
Identity = 218/357 (61.06%), Postives = 249/357 (69.75%), Query Frame = 1


Query: 4   TSSLDDSAASDSTSVSPVTPL----LFHSSSSSCPPG----------VPYDAESRKLPSS 63
           TSS+ +S  SDS S++P++      +  S  S C  G          V  +AESRKLPSS
Sbjct: 3   TSSIGESTTSDSISMAPISAASTLPVTKSPESLCRVGSGSSAIIDAEVGVEAESRKLPSS 62

Query: 64  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 123
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDAVTNFKP + 
Sbjct: 63  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPLSE 122

Query: 124 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS-KRYGGGTTTTTTAAAAHSLQNAA 183
           +  D   E  FLNSHSK EIVDMLRKHTY+DE++QS K YG    +         L ++ 
Sbjct: 123 TEEDDV-ETAFLNSHSKAEIVDMLRKHTYSDELEQSRKNYGLFDGSGQRIMNKDGLFSSF 182

Query: 184 SESD-----REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMG 243
              D     RE LFEK VTPSDVGKLNRLVIPKQHAEK+FPL  G  ++KG+LLNFEDMG
Sbjct: 183 GGGDRAVKSREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLKSG-NNSKGVLLNFEDMG 242

Query: 244 GKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG-- 303
           GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGD+V F RSTGPD +LYID KP    
Sbjct: 243 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGPDNQLYIDWKPRNGS 302

Query: 304 --------VKAVQVVKLFGVNILEVPVG---WCGKRDRE-GLSELERTKKQRIVKAL 327
                    + + +V+LFGVNI EVP       GKR RE  L  LE TKKQR++ AL
Sbjct: 303 NVVGLPVPAQPIPMVRLFGVNIFEVPSNESCSTGKRMREMELLALECTKKQRVIDAL 357

[Close]

BLAST of Cp4.1LG01g17620 vs. TrEMBL
Match: F6HFQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03070 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.8e-100
Identity = 219/357 (61.34%), Postives = 247/357 (69.19%), Query Frame = 1


Query: 5   SSLDDSAASDSTSVS-PVTPLL--FHSSSSSCPPGV----------PYDAESRKLPSSRF 64
           S +D+S  SDS S S P    L    S  S C  G             +AESRKLPSSRF
Sbjct: 24  SCIDESTTSDSISTSLPALSALPATKSPESLCRVGSGTSVILDSESSIEAESRKLPSSRF 83

Query: 65  KGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSS 124
           KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDAVTNFKP + + 
Sbjct: 84  KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETE 143

Query: 125 VDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASE- 184
            D   EA FLNSHSK EIVDMLRKHTYNDE++QSKR  G       + A   +    S+ 
Sbjct: 144 ED-DIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPFGSDR 203

Query: 185 --SDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWR 244
               RE LFEKTVTPSDVGKLNRLVIPKQHAEK+FPL  G  ++KG+LLNFEDMGGK+WR
Sbjct: 204 VTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGT-TSKGVLLNFEDMGGKVWR 263

Query: 245 FRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP--------G 304
           FRYSYWNSSQSYVLTKGWSRFVKEK L+AGD+V F RSTG DK+LYID K          
Sbjct: 264 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTNQIN 323

Query: 305 GVKAVQVVKLFGVNILEVPV----------GWCGKRDRE-GLSELERTKKQRIVKAL 327
            V+ V++V+LFGVNI +VPV           W GKR  E  L   E +KKQR++ A+
Sbjct: 324 PVEPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEMELLSFECSKKQRVIGAV 378

[Close]

BLAST of Cp4.1LG01g17620 vs. TrEMBL
Match: A0A0D2W3Z8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G080000 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 5.4e-100
Identity = 215/349 (61.60%), Postives = 241/349 (69.05%), Query Frame = 1


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYD--AESRKLPSSRFKGVVPQP 60
           MD +S +DDS  SDS +VSP++PL    S +S   GV  D  AESRKLPSS++KGVVPQP
Sbjct: 1   MDGSSCIDDSTTSDSMNVSPLSPLCRVGSGNS---GVILDTEAESRKLPSSKYKGVVPQP 60

Query: 61  NGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEA 120
           NGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDAVTNFK    +  D   E 
Sbjct: 61  NGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAARRFRGRDAVTNFKQAEKTEGDD-MEM 120

Query: 121 DFLNSHSKLEIVDMLRKHTYNDEIQQSKRY----GGGTTTTTTAAAAHSLQNAASESDRE 180
            FL S SK EIVDMLRKHTYNDE++QS+R     G G       A             RE
Sbjct: 121 AFLESRSKAEIVDMLRKHTYNDELEQSRRSYGLDGNGKRVVKYNAGFGPFSFGLGLKPRE 180

Query: 181 VLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYW 240
            LFEK VTPSDVGKLNRLVIPKQHAEK+FPL  G   +K +LLNFED+ GK+WRFRYSYW
Sbjct: 181 QLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQTGTAFSKEVLLNFEDVRGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYID---------GKPGGVKAV 300
           NSSQSYVLTKGWSRFVKEK L AGD+V F RSTGP+K+LYID         G       V
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLNAGDIVSFQRSTGPEKQLYIDCKARTGSVSGSANPAVPV 300

Query: 301 QVVKLFGVNILEV------PVGWC-GKRDRE-GLSELERTKKQRIVKAL 327
             V+LFGVNI  +       VG C GKR RE  L ELE +KKQR++ AL
Sbjct: 301 PFVRLFGVNIFNISGGGGDSVGGCNGKRTREMELLELEFSKKQRVIDAL 345

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR10
Match: AT1G13260.1 (AT1G13260.1 related to ABI3/VP1 1)

HSP 1 Score: 340.5 bits (872), Expect = 1.1e-93
Identity = 190/298 (63.76%), Postives = 213/298 (71.48%), Query Frame = 1


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           +AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RD
Sbjct: 51  EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRD 110

Query: 100 AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRY--GGGTTTTTT 159
           AVTNFK           E DFLNSHSK EIVDMLRKHTYN+E++QSKR   G G  T T 
Sbjct: 111 AVTNFKDVKMDED----EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTL 170

Query: 160 AAAAHSLQNAASESDR--EVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGI 219
             +  S    ++   R  E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KG+
Sbjct: 171 LTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGV 230

Query: 220 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 279
           LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI
Sbjct: 231 LLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI 290

Query: 280 DGKP---GGVKAVQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIVKA 326
             K      + A +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 291 GWKSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR10
Match: AT1G25560.1 (AT1G25560.1 AP2/B3 transcription factor family protein)

HSP 1 Score: 338.6 bits (867), Expect = 4.3e-93
Identity = 191/305 (62.62%), Postives = 213/305 (69.84%), Query Frame = 1


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 100 AVTNFKPGAFSSVDAA-FEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA 159
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R         + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 160 AAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGS 219
               +  N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G     
Sbjct: 181 LETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSP 240

Query: 220 TKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDK 279
           TKG+L+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD+
Sbjct: 241 TKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDR 300

Query: 280 KLYIDGKPGGVKAVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERTKKQR 327
           +LYI  K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ 
Sbjct: 301 QLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQA 360

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR10
Match: AT3G25730.1 (AT3G25730.1 ethylene response DNA binding factor 3)

HSP 1 Score: 331.6 bits (849), Expect = 5.3e-91
Identity = 193/339 (56.93%), Postives = 227/339 (66.96%), Query Frame = 1


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSSSSCPPG------VPYDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP + L    S +S          V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAAS 180
                  E +FLN+HSK EIVDMLRKHTY +E+ Q KR   G    TTA A  S+     
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSTKGILLNFEDMGGKLW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+W
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG---VKA 300
           RFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K      ++ 
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIV 324
            +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 GRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR10
Match: AT1G68840.1 (AT1G68840.1 related to ABI3/VP1 2)

HSP 1 Score: 331.3 bits (848), Expect = 6.9e-91
Identity = 191/326 (58.59%), Postives = 216/326 (66.26%), Query Frame = 1


Query: 29  SSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAY 88
           SS    P    + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++Y
Sbjct: 43  SSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSY 102

Query: 89  DIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS--- 148
           DIAA RFRGRDAV NFK       D A    FL +HSK EIVDMLRKHTY DE++Q+   
Sbjct: 103 DIAACRFRGRDAVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKR 162

Query: 149 ----------KRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIP 208
                     KR G  TT           QN      REVLFEK VTPSDVGKLNRLVIP
Sbjct: 163 QLFLSVDANGKRNGSSTT-----------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 222

Query: 209 KQHAEKNFPL-GEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKT 268
           KQHAEK+FPL       TKG+L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK 
Sbjct: 223 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 282

Query: 269 LRAGDVVRFLRSTGPDKKLYIDGK----PGGVKAVQVVKLFGVNILEVP-------VGWC 327
           LRAGDVV F RSTG +++LYID K    P       VV+LFGV+I  V        V  C
Sbjct: 283 LRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVC 342

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR10
Match: AT1G50680.1 (AT1G50680.1 AP2/B3 transcription factor family protein)

HSP 1 Score: 165.2 bits (417), Expect = 6.6e-41
Identity = 93/244 (38.11%), Postives = 138/244 (56.56%), Query Frame = 1


Query: 50  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 109
           ++KGVV Q NG WGAQIY  H+R+WLGTF    +AA AYD A+++ R  DA  + +   +
Sbjct: 27  KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDA-NSHRNFPW 86

Query: 110 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAAS 169
           S++    E DF N ++   +++M+R  +Y  + +   R       +         +   +
Sbjct: 87  STITLN-EPDFQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARGEVN 146

Query: 170 -ESDR----EVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL----------GEGMGSTKG 229
            ESD+      LF+K +TPSDVGKLNRLVIPK++A K  P           GE +GS + 
Sbjct: 147 QESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVED 206

Query: 230 ILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLY 279
           + + F D   + W+FRY YW SSQS+V T+GW+ FVKEK L+  DV+ F     P+    
Sbjct: 207 VEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKT 266

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: gi|659131613|ref|XP_008465773.1| (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 1.1e-125
Identity = 240/326 (73.62%), Postives = 265/326 (81.29%), Query Frame = 1


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S ASDSTS+SPVTPLLFHSS     P    +AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESTASDSTSISPVTPLLFHSS-----PSATAEAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN E+ AAKAYDIAALRFRGRDAVTNFKP      D A EADFLNSH
Sbjct: 64  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAH-SLQNAASESDREVLFEKTVTP 184
           SKLEIVDMLRKHTYN+E+QQSKR+  G     + +  H S   + S+S REVLFEKTVTP
Sbjct: 124 SKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTP 183

Query: 185 SDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLT 244
           SDVGKLNRLVIPKQHAEKNFP+ EG+ S KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLT
Sbjct: 184 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 243

Query: 245 KGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP---GGVKAVQVVKLFGVNILEVPV 304
           KGWSRFVK+ TLRAGDVVRFLRSTGPDK+LYI   P    G+K V VVKLFGVNIL++PV
Sbjct: 244 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 303

Query: 305 GWCGKRDREGLSELERTKKQRIVKAL 327
              GK +   L   + TKKQR++K L
Sbjct: 304 ---GKTEGAFLELQQPTKKQRVIKPL 321

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: gi|449466693|ref|XP_004151060.1| (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-124
Identity = 239/325 (73.54%), Postives = 262/325 (80.62%), Query Frame = 1


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S ASDSTS+SPVTPLLFHSS     P    +AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESTASDSTSISPVTPLLFHSS-----PSATAEAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN E+ AAKAYDIAALRFRGRDAVTNFKP      D A EADFLNSH
Sbjct: 64  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPS 184
           SKLEIVDMLRKHTYN+E+QQSKR   G     + +  H      S+S+REVLFEKTVTPS
Sbjct: 124 SKLEIVDMLRKHTYNEELQQSKRQQRGAMAVDSGSFPH---YPGSDSNREVLFEKTVTPS 183

Query: 185 DVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTK 244
           DVGKLNRLVIPKQHAEKNFP+ EG+ S KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLTK
Sbjct: 184 DVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTK 243

Query: 245 GWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP---GGVKAVQVVKLFGVNILEVPVG 304
           GWSRFVK+ TLRAGDVVRFLRSTGPDK+LYI   P    G+  V VVKLFGVNIL++PV 
Sbjct: 244 GWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPV- 303

Query: 305 WCGKRDREGLSELERTKKQRIVKAL 327
             GK +   L   + TKKQRI+K L
Sbjct: 304 --GKTEGAFLELQQPTKKQRIIKPL 317

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: gi|593686260|ref|XP_007143801.1| (hypothetical protein PHAVU_007G102800g [Phaseolus vulgaris])

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-101
Identity = 219/368 (59.51%), Postives = 252/368 (68.48%), Query Frame = 1


Query: 1   MDTTSSLDDSAA-SDSTSVSP---VTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVP 60
           MD  SS D++   SDS S+ P     PL+   S    P  V  +AESRKLPSS++KGVVP
Sbjct: 1   MDAGSSTDETTTTSDSLSLPPNQSPPPLIRVGSGGVDPDAVSGEAESRKLPSSKYKGVVP 60

Query: 61  QPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAF 120
           QPNGRWGAQIYEKHQRVWLGTFN E +AA+AYDIAA RFRGRDAVTNFKP A +  DA  
Sbjct: 61  QPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLAGAGDDA-- 120

Query: 121 EADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVL 180
           E++FLNSHSK EIVDMLRKHTY+DE+QQS R G         AA  +   A     RE L
Sbjct: 121 ESEFLNSHSKSEIVDMLRKHTYDDELQQSTRCG-----RRRRAAEAASSGAFDPQAREQL 180

Query: 181 FEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS----------TKGILLNFEDMGGKL 240
           FEKTVTPSDVGKLNRLVIPKQHAEK+FPL  G GS           KG+LLNFED+GGK+
Sbjct: 181 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLSTGSGSGVSLCTAAAAAKGVLLNFEDVGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK-------- 300
           WRFRYSYWNSSQSYVLTKGWSRFVKE  LRAGD VRF +STGPD++LYID K        
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKENNLRAGDAVRFFKSTGPDRQLYIDCKARSSGGIC 300

Query: 301 ------PGG--------VKAVQVVKLFGVNILEVP------VGWCGKRDREGLSELERTK 327
                  GG        V+ VQ+V+LFGVN+L++P      VG+ GKR    L   E +K
Sbjct: 301 ELNNNNAGGLFVPVGPVVEQVQMVRLFGVNLLKLPGSDGVRVGYEGKRKEMELFAFECSK 360

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: gi|255566851|ref|XP_002524409.1| (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1 [Ricinus communis])

HSP 1 Score: 377.1 bits (967), Expect = 3.1e-101
Identity = 217/375 (57.87%), Postives = 251/375 (66.93%), Query Frame = 1


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVP--------------------YDAESR 64
           S +D+S  SDS S++P + +    SS+  P   P                     +AESR
Sbjct: 4   SCIDESTTSDSISITPTSNI--SPSSNPLPSKSPESPLCRVGSGTSVVLDSESGIEAESR 63

Query: 65  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 124
           KLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDA+TNF
Sbjct: 64  KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAITNF 123

Query: 125 KPGA--FSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAH 184
           KP A    S +   E  FLNSHSK EIVDMLRKHTYNDE++QSKR       T+      
Sbjct: 124 KPQATDHQSEEDEIETAFLNSHSKAEIVDMLRKHTYNDELEQSKR-----NYTSNNGRGD 183

Query: 185 SLQNAASESD-------------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGM 244
             QN  + ++             RE LFEK VTPSDVGKLNRLVIPKQHAEK+FPL  G 
Sbjct: 184 KFQNRTNMNNVGLSGSERIIMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS 243

Query: 245 GSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGP 304
            STKG+LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGD+VRFL+STGP
Sbjct: 244 NSTKGVLLNFEDITGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGP 303

Query: 305 DKKLYIDGKPG------------GVKAVQVVKLFGVNILEVP-----VGWCGKRDRE-GL 327
           DK+LYID K               V+ VQ+V+LFGVNI +VP      G  GKR RE  L
Sbjct: 304 DKQLYIDWKVRTLTPTVSNPVVCSVQPVQMVRLFGVNIFKVPGNSHIEGCNGKRIREMEL 363

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: gi|529366982|gb|AGS83386.1| (tempranillo [Olea europaea])

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 218/357 (61.06%), Postives = 249/357 (69.75%), Query Frame = 1


Query: 4   TSSLDDSAASDSTSVSPVTPL----LFHSSSSSCPPG----------VPYDAESRKLPSS 63
           TSS+ +S  SDS S++P++      +  S  S C  G          V  +AESRKLPSS
Sbjct: 3   TSSIGESTTSDSISMAPISAASTLPVTKSPESLCRVGSGSSAIIDAEVGVEAESRKLPSS 62

Query: 64  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 123
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AAKAYDIAA RFRGRDAVTNFKP + 
Sbjct: 63  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAAKAYDIAAQRFRGRDAVTNFKPLSE 122

Query: 124 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS-KRYGGGTTTTTTAAAAHSLQNAA 183
           +  D   E  FLNSHSK EIVDMLRKHTY+DE++QS K YG    +         L ++ 
Sbjct: 123 TEEDDV-ETAFLNSHSKAEIVDMLRKHTYSDELEQSRKNYGLFDGSGQRIMNKDGLFSSF 182

Query: 184 SESD-----REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMG 243
              D     RE LFEK VTPSDVGKLNRLVIPKQHAEK+FPL  G  ++KG+LLNFEDMG
Sbjct: 183 GGGDRAVKSREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLKSG-NNSKGVLLNFEDMG 242

Query: 244 GKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG-- 303
           GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGD+V F RSTGPD +LYID KP    
Sbjct: 243 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGPDNQLYIDWKPRNGS 302

Query: 304 --------VKAVQVVKLFGVNILEVPVG---WCGKRDRE-GLSELERTKKQRIVKAL 327
                    + + +V+LFGVNI EVP       GKR RE  L  LE TKKQR++ AL
Sbjct: 303 NVVGLPVPAQPIPMVRLFGVNIFEVPSNESCSTGKRMREMELLALECTKKQRVIDAL 357

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAV1_ARATH	2.0e-92	63.76	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
RAVL1_ARATH	7.7e-92	62.62	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
RAVL4_ARATH	9.4e-90	56.93	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
RAV2_ARATH	1.2e-89	58.59	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Y1934_ORYSJ	1.4e-85	62.41	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Cp4.1LG01g17620 vs. TrEMBL


Match Name	E-value	Identity	Description
V7BDZ9_PHAVU	7.5e-102	59.51	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G102800g PE=4 SV=1	[more]
B9SEJ0_RICCO	2.2e-101	57.87	DNA-binding protein RAV1, putative OS=Ricinus communis GN=RCOM_0705620 PE=4 SV=1	[more]
W8CWZ4_OLEEU	1.1e-100	61.06	Tempranillo OS=Olea europaea GN=TEM PE=2 SV=1	[more]
F6HFQ2_VITVI	1.8e-100	61.34	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03070 PE=4 SV=...	[more]
A0A0D2W3Z8_GOSRA	5.4e-100	61.60	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G080000 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g17620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13260.1	1.1e-93	63.76	related to ABI3/VP1 1	[more]
AT1G25560.1	4.3e-93	62.62	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	5.3e-91	56.93	ethylene response DNA binding factor 3	[more]
AT1G68840.1	6.9e-91	58.59	related to ABI3/VP1 2	[more]
AT1G50680.1	6.6e-41	38.11	AP2/B3 transcription factor family protein	[more]

BLAST of Cp4.1LG01g17620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131613\|ref\|XP_008465773.1\|	1.1e-125	73.62	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucu...	[more]
gi\|449466693\|ref\|XP_004151060.1\|	1.5e-124	73.54	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucu...	[more]
gi\|593686260\|ref\|XP_007143801.1\|	1.1e-101	59.51	hypothetical protein PHAVU_007G102800g [Phaseolus vulgaris]	[more]
gi\|255566851\|ref\|XP_002524409.1\|	3.1e-101	57.87	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1 [Ricinus c...	[more]
gi\|529366982\|gb\|AGS83386.1\|	1.5e-100	61.06	tempranillo [Olea europaea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR015300	DNA-bd_pseudobarrel_sf
IPR003340	B3_DNA-bd
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17620.1	Cp4.1LG01g17620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 50..105 score: 1.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..97 score: 5.
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..111 score: 1.4
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 50..105 score: 19
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 177..271 score: 1.3
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 177..279 score: 6.4
IPR003340	B3 DNA binding domain	PROFILE	PS50863	B3	coord: 177..279 score: 13
IPR015300	DNA-binding pseudobarrel domain	GENE3D	G3DSA:2.40.330.10		coord: 166..280 score: 4.8
IPR015300	DNA-binding pseudobarrel domain	unknown	SSF101936	DNA-binding pseudobarrel domain	coord: 173..270 score: 2.09
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 49..105 score: 2.88
None	No IPR available	PANTHER	PTHR31140	FAMILY NOT NAMED	coord: 41..300 score: 1.1E
None	No IPR available	PANTHER	PTHR31140:SF3	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED	coord: 41..300 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g17620	Cucsa.283870	Cucumber (Gy14) v1	cgycpeB0757
Cp4.1LG01g17620	CmaCh18G010420	Cucurbita maxima (Rimu)	cmacpeB436
Cp4.1LG01g17620	CmaCh04G020120	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g17620	CmoCh18G010600	Cucurbita moschata (Rifu)	cmocpeB400
Cp4.1LG01g17620	CmoCh04G021020	Cucurbita moschata (Rifu)	cmocpeB685
Cp4.1LG01g17620	CmoCh15G010510	Cucurbita moschata (Rifu)	cmocpeB286
Cp4.1LG01g17620	Cla020368	Watermelon (97103) v1	cpewmB439
Cp4.1LG01g17620	Cla000855	Watermelon (97103) v1	cpewmB401
Cp4.1LG01g17620	Csa5G608380	Cucumber (Chinese Long) v2	cpecuB434
Cp4.1LG01g17620	MELO3C003002	Melon (DHL92) v3.5.1	cpemeB352
Cp4.1LG01g17620	MELO3C012217	Melon (DHL92) v3.5.1	cpemeB387
Cp4.1LG01g17620	ClCG03G009860	Watermelon (Charleston Gray)	cpewcgB381
Cp4.1LG01g17620	ClCG05G023000	Watermelon (Charleston Gray)	cpewcgB400
Cp4.1LG01g17620	CSPI05G24970	Wild cucumber (PI 183967)	cpecpiB429
Cp4.1LG01g17620	Lsi09G010220	Bottle gourd (USVL1VR-Ls)	cpelsiB313
Cp4.1LG01g17620	MELO3C012217.2	Melon (DHL92) v3.6.1	cpemedB448
Cp4.1LG01g17620	MELO3C003002.2	Melon (DHL92) v3.6.1	cpemedB413
Cp4.1LG01g17620	CsaV3_5G023010	Cucumber (Chinese Long) v3	cpecucB0530
Cp4.1LG01g17620	CsaV3_5G034010	Cucumber (Chinese Long) v3	cpecucB0535
Cp4.1LG01g17620	Bhi07G001136	Wax gourd	cpewgoB0574
Cp4.1LG01g17620	CsGy5G024470	Cucumber (Gy14) v2	cgybcpeB640
Cp4.1LG01g17620	CsGy5G013930	Cucumber (Gy14) v2	cgybcpeB639
Cp4.1LG01g17620	Carg21562	Silver-seed gourd	carcpeB1450

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g17620	Cp4.1LG09g02730	Cucurbita pepo (Zucchini)	cpecpeB037

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g17620	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g17620	Cucurbita moschata (Rifu)	cmocpeB680
Cp4.1LG01g17620	Cucurbita moschata (Rifu)	cmocpeB682