CsaV3_5G010340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G010340
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPollen Ole e 1 allergen/extensin
Locationchr5 : 6215994 .. 6216901 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCACGTCTTCTAAATCCTTGATTCCATCACACACACACATATATATATAAATCCCATTTCCCTTTGTCCCCATCAAAGGAAAACAAACACATACACACAAAAATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCACATTGCTTCCGCCGACCCTGTCCGACTCCCCCACAAACCCCTCTCCATGGCAATCGAAGGATTGGTCTACTGCCAAAACTGCAAGAAAATCGGGACGTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCCAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCAGAGTTGGTTGGGTACCAAATGAACCACCCGGTTCTCGACCACCCACTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTTCGAGAAAAAATTTGTGGTCGGCACCAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAGATCATTATATTATATTGAGTAATATTATACATTTTAAACTTCTATATATAATTTATACTCTCTATGTGTGATTTAATGTGTTTTGTTTTGTTATTTTCTTTTGGGGGCTATTCATGTGTTTGGGGTTTGGAATTTGTTTGGTGCTAAATGTAGTTTGATGTGTTTTTGTTCAGCCAGAAATGAGAGAATGAGAAAGAAGTGAAACTTTTTTGTTTGGATTTAACTTTTTTCCATTTTATGATCCTTAATTGGATGATGTAGCAATGGGAATTATATATATATATATATAGTAGTGAGAATTGGG

mRNA sequence

ATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCACATTGCTTCCGCCGACCCTGTCCGACTCCCCCACAAACCCCTCTCCATGGCAATCGAAGGATTGGTCTACTGCCAAAACTGCAAGAAAATCGGGACGTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCCAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCAGAGTTGGTTGGGTACCAAATGAACCACCCGGTTCTCGACCACCCACTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTTCGAGAAAAAATTTGTGGTCGGCACCAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAG

Coding sequence (CDS)

ATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCACATTGCTTCCGCCGACCCTGTCCGACTCCCCCACAAACCCCTCTCCATGGCAATCGAAGGATTGGTCTACTGCCAAAACTGCAAGAAAATCGGGACGTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCCAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCAGAGTTGGTTGGGTACCAAATGAACCACCCGGTTCTCGACCACCCACTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTTCGAGAAAAAATTTGTGGTCGGCACCAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAG

Protein sequence

MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL
Homology
[Close]
BLAST of CsaV3_5G010340 vs. NCBI nr
Match: KGN50679.1 (hypothetical protein Csa_5G211030 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 4.5e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60
           MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG
Sbjct: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60

Query: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120
           AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD
Sbjct: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120

Query: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 167
           CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL
Sbjct: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 166

[Close]
BLAST of CsaV3_5G010340 vs. NCBI nr
Match: XP_008454812.1 (PREDICTED: non-classical arabinogalactan protein 30 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 4.4e-87
Identity = 158/167 (94.61%), Postives = 164/167 (98.20%), Query Frame = 0 

Query: 1   MSTKNLLSLSF-LLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPIS 60
           MSTKNLLSLSF LLLLLHIASA+PVR PHKPLS+A+EGLVYCQNCKK+GTWSLTEAKPIS
Sbjct: 1   MSTKNLLSLSFLLLLLLHIASANPVRPPHKPLSVAVEGLVYCQNCKKVGTWSLTEAKPIS 60

Query: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120
           GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS
Sbjct: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120

Query: 121 DCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 167
           DCNLLTNLNYGLTGAPLR+EKKFV+G NYRAAVYAAGPLAFHPQKCL
Sbjct: 121 DCNLLTNLNYGLTGAPLRYEKKFVLGHNYRAAVYAAGPLAFHPQKCL 167

[Close]
BLAST of CsaV3_5G010340 vs. NCBI nr
Match: XP_004148198.2 (PREDICTED: proline-rich protein 3 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 8.5e-75
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 33  MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 92
           MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL
Sbjct: 1   MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 60

Query: 93  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAV 152
           VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAV
Sbjct: 61  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAV 120

Query: 153 YAAGPLAFHPQKCL 167
           YAAGPLAFHPQKCL
Sbjct: 121 YAAGPLAFHPQKCL 134

[Close]
BLAST of CsaV3_5G010340 vs. NCBI nr
Match: XP_022942759.1 (non-classical arabinogalactan protein 30 [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 9.8e-63
Identity = 110/131 (83.97%), Postives = 124/131 (94.66%), Query Frame = 0 

Query: 36  EGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGY 95
           EG+VYCQNC+KIG+WSLT AKPI+GAKISVICKNHN+QV FYKVY+TNK GYFYAELVGY
Sbjct: 69  EGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGY 128

Query: 96  QMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAA 155
           +M HPVLDHPLQACKVKP+SSPLSDC+LLTNLNYG+ GAPLR++KKFVVG  YRAAVY+A
Sbjct: 129 KMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSA 188

Query: 156 GPLAFHPQKCL 167
           GPLAFHP+KCL
Sbjct: 189 GPLAFHPEKCL 199

[Close]
BLAST of CsaV3_5G010340 vs. NCBI nr
Match: XP_023541968.1 (non-classical arabinogalactan protein 30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.3 bits (630), Expect = 3.7e-62
Identity = 109/131 (83.21%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 36  EGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGY 95
           EG+VYCQNC+KIG+WSLT AKPI+GAKISVICKNHN+QV FYKVY+TNK GYFYAELVGY
Sbjct: 36  EGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGY 95

Query: 96  QMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAA 155
           +M HPVLDHPLQACKVKP+SSPL DC+LLTNLNYG+ GAPLR++KKFVVG  YRAAVY+A
Sbjct: 96  KMPHPVLDHPLQACKVKPISSPLPDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSA 155

Query: 156 GPLAFHPQKCL 167
           GPLAFHP+KCL
Sbjct: 156 GPLAFHPEKCL 166

[Close]
BLAST of CsaV3_5G010340 vs. TAIR10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 181.4 bits (459), Expect = 4.5e-46
Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 0 

Query: 29  KPLSMAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYF 88
           K +  A+EG+VYCQ+C K G+WSL  A+ I+GAKIS+ICKNH  QV FYKV++T+  G+F
Sbjct: 39  KTVEAAVEGMVYCQSCDKFGSWSLAGAEAIAGAKISIICKNHRQQVSFYKVFRTDSYGHF 98

Query: 89  YAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNY 148
           Y EL G++M    LDHPL +C+ K VSSP  DCNL +N+N  L GAPLR+E+K +  TNY
Sbjct: 99  YGELKGFKMTPHFLDHPLHSCRAKLVSSPREDCNLFSNINNALDGAPLRYEEKRLKWTNY 158

Query: 149 RAAVYAAGPLAFHPQKC 166
            A +YAAGPLAF P  C
Sbjct: 159 EAVIYAAGPLAFRPDHC 175

[Close]
BLAST of CsaV3_5G010340 vs. TAIR10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-15
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 0 

Query: 4   KNLLSLSFLLLLLH---IASADPVRLPHKPLSM-----AIEGLVYCQNCKKIGTWSLTEA 63
           K LL LS  L  ++   ++SA P+  P  P  M     A+EG+VYC++CK  G  +L EA
Sbjct: 9   KYLLLLSISLTFIYTNAVSSASPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEA 68

Query: 64  KPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKP-V 123
            P+ GA + + C N    V      +T+K+GYF+  ++  +       H  +A    P  
Sbjct: 69  SPLQGATVKLACNNTKRGVTMET--KTDKNGYFF--MLAPKKLTTYAFHTCRAWPTNPGP 128

Query: 124 SSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHP 163
           ++    C + + LN G+TGA L+  K   +G  +   +++ GP AF P
Sbjct: 129 TTATMTCTVPSKLNNGITGAMLKPSKTINIG-EHDYVLFSVGPFAFEP 171

[Close]
BLAST of CsaV3_5G010340 vs. TAIR10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 67.4 bits (163), Expect = 9.6e-12
Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 23  PVRLPHKPLS---MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKF--- 82
           PV+ P+ P S   +AIEG + C++  K          PI G K+ V+C   +   K    
Sbjct: 42  PVKTPYLPKSNPDIAIEGFILCKSGYK--------TYPIQGGKVKVVCPVVDSYGKLVAK 101

Query: 83  --YKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGA 137
                Y T+  GYFY   + Y ++H V  + + +CKVK  SSP+  C   TN+N G+TGA
Sbjct: 102 VTISSYPTDLKGYFY--FITYGLSHKV--NNISSCKVKLESSPVFTCKTPTNVNKGVTGA 151

[Close]
BLAST of CsaV3_5G010340 vs. TAIR10
Match: AT2G33790.1 (arabinogalactan protein 30)

HSP 1 Score: 67.4 bits (163), Expect = 9.6e-12
Identity = 39/134 (29.10%), Postives = 70/134 (52.24%), Query Frame = 0 

Query: 33  MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 92
           +A+ G+VYC+ CK  G  ++  AKP+  A + ++CKN  + +   K   T+K+GYF    
Sbjct: 110 VAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK---TDKNGYFM--- 169

Query: 93  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKK----FVVGTNY 152
                   V ++ ++ C+   V SP + C+ +++L+ G  G+ L+   K      +   +
Sbjct: 170 --LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWF 229

Query: 153 RAAVYAAGPLAFHP 163
           + +VY  GP AF P
Sbjct: 230 KYSVYNVGPFAFEP 235

[Close]
BLAST of CsaV3_5G010340 vs. TAIR10
Match: AT1G28290.1 (arabinogalactan protein 31)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 42/134 (31.34%), Postives = 64/134 (47.76%), Query Frame = 0 

Query: 33  MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 92
           +A+ G VYC++CK     +L  AKPI GA + ++CK+  +         T+K+GYF    
Sbjct: 230 VAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKN---ITAETTTDKNGYFL--- 289

Query: 93  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKF----VVGTNY 152
                   V +   + C+V  V S    C+ ++ L  G  GA L+ EKK     VV    
Sbjct: 290 --LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKL 349

Query: 153 RAAVYAAGPLAFHP 163
              ++  GP AF+P
Sbjct: 350 VYGLFNVGPFAFNP 355

[Close]
BLAST of CsaV3_5G010340 vs. Swiss-Prot
Match: sp|P93013|AGP30_ARATH (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 39/134 (29.10%), Postives = 70/134 (52.24%), Query Frame = 0 

Query: 33  MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 92
           +A+ G+VYC+ CK  G  ++  AKP+  A + ++CKN  + +   K   T+K+GYF    
Sbjct: 110 VAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK---TDKNGYFM--- 169

Query: 93  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKK----FVVGTNY 152
                   V ++ ++ C+   V SP + C+ +++L+ G  G+ L+   K      +   +
Sbjct: 170 --LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWF 229

Query: 153 RAAVYAAGPLAFHP 163
           + +VY  GP AF P
Sbjct: 230 KYSVYNVGPFAFEP 235

[Close]
BLAST of CsaV3_5G010340 vs. Swiss-Prot
Match: sp|Q9FZA2|AGP31_ARATH (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 42/134 (31.34%), Postives = 64/134 (47.76%), Query Frame = 0 

Query: 33  MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 92
           +A+ G VYC++CK     +L  AKPI GA + ++CK+  +         T+K+GYF    
Sbjct: 230 VAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKN---ITAETTTDKNGYFL--- 289

Query: 93  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKF----VVGTNY 152
                   V +   + C+V  V S    C+ ++ L  G  GA L+ EKK     VV    
Sbjct: 290 --LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKL 349

Query: 153 RAAVYAAGPLAFHP 163
              ++  GP AF+P
Sbjct: 350 VYGLFNVGPFAFNP 355

[Close]
BLAST of CsaV3_5G010340 vs. Swiss-Prot
Match: sp|Q9LZJ7|PRP3_ARATH (Proline-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=PRP3 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.8e-07
Identity = 36/109 (33.03%), Postives = 51/109 (46.79%), Query Frame = 0 

Query: 34  AIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKN------HNDQVKFYKVYQTNKDGY 93
           A++G++ C+N          E  PI GAKI ++C +       N +V  Y    T+  GY
Sbjct: 187 AVDGIILCKNG--------YETYPILGAKIQIVCSDPASYGKSNTEVVIYS-NPTDSKGY 246

Query: 94  FYAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPL 137
           F+  L   +         L  C+VK   SP+  C   TN+N GLTG PL
Sbjct: 247 FHLSLTSIK--------DLAYCRVKLYLSPVETCKNPTNVNKGLTGVPL 278

[Close]
BLAST of CsaV3_5G010340 vs. Swiss-Prot
Match: sp|Q03211|PEXLP_TOBAC (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 32/103 (31.07%), Postives = 48/103 (46.60%), Query Frame = 0 

Query: 35  IEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVG 94
           + GLVYC++C   G  +L  A  + GA + +IC      V++     T+  G F      
Sbjct: 291 VSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKTMVQW---ATTDNKGEFRI---- 350

Query: 95  YQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLR 138
             M   +    +  CKV  V SP  +CN+ TN N G +G  L+
Sbjct: 351 --MPKSLTTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLK 384

[Close]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match: tr|A0A0A0KP60|A0A0A0KP60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G211030 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.0e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60
           MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG
Sbjct: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60

Query: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120
           AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD
Sbjct: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120

Query: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 167
           CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL
Sbjct: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 166

[Close]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match: tr|A0A1S3BZJ5|A0A1S3BZJ5_CUCME (non-classical arabinogalactan protein 30 OS=Cucumis melo OX=3656 GN=LOC103495126 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-87
Identity = 158/167 (94.61%), Postives = 164/167 (98.20%), Query Frame = 0 

Query: 1   MSTKNLLSLSF-LLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPIS 60
           MSTKNLLSLSF LLLLLHIASA+PVR PHKPLS+A+EGLVYCQNCKK+GTWSLTEAKPIS
Sbjct: 1   MSTKNLLSLSFLLLLLLHIASANPVRPPHKPLSVAVEGLVYCQNCKKVGTWSLTEAKPIS 60

Query: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120
           GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS
Sbjct: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120

Query: 121 DCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 167
           DCNLLTNLNYGLTGAPLR+EKKFV+G NYRAAVYAAGPLAFHPQKCL
Sbjct: 121 DCNLLTNLNYGLTGAPLRYEKKFVLGHNYRAAVYAAGPLAFHPQKCL 167

[Close]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match: tr|A0A2P6SLD1|A0A2P6SLD1_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0370811 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50
Identity = 97/160 (60.62%), Postives = 120/160 (75.00%), Query Frame = 0 

Query: 6   LLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISGAKISV 65
           +L  S LL +L    +       K + + +EG+VYCQ+C   GTWS+T AKPI  AKISV
Sbjct: 8   VLVSSLLLTVLAFFPSTTATEHQKKIDVVVEGMVYCQSCDHSGTWSMTGAKPIPSAKISV 67

Query: 66  ICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLT 125
           ICKNH DQV FYK +QTN DGYFYA L G++MNH +LDHPLQAC VKPVSSPL DC LL+
Sbjct: 68  ICKNHKDQVSFYKAFQTNADGYFYAHLDGFKMNH-MLDHPLQACHVKPVSSPLEDCRLLS 127

Query: 126 NLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKC 166
           N+NYGL+GAPLR+E K V+G++Y A V++AGPLAF P+ C
Sbjct: 128 NINYGLSGAPLRYEDKRVMGSSYEAVVFSAGPLAFRPESC 166

[Close]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match: tr|A0A2I4DYR9|A0A2I4DYR9_9ROSI (non-classical arabinogalactan protein 30-like OS=Juglans regia OX=51240 GN=LOC108984707 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 96/166 (57.83%), Postives = 124/166 (74.70%), Query Frame = 0 

Query: 1   MSTKNLLSLSFLLLLLHIASADPVRL-PHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPIS 60
           M++  LL L   LL L  A A  +   P K   + +EG+VYCQ+C++ GTWSL+ AKPI 
Sbjct: 1   MASNQLLILVSSLLFLQSAFATLMAAEPAKKTDVVVEGVVYCQSCEQAGTWSLSGAKPIP 60

Query: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120
            AK+SVICKNH DQV +YKV++T+ +GYFYA+L G+ M+  +L+HPLQAC VKPVSSPL 
Sbjct: 61  AAKVSVICKNHKDQVSYYKVFETDGNGYFYAQLEGFTMSQCLLEHPLQACHVKPVSSPLQ 120

Query: 121 DCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKC 166
           +CNLLTN+NYGL G+PLR+E K + G+NY A +YAAGPLAF P  C
Sbjct: 121 NCNLLTNVNYGLYGSPLRYETKKLFGSNYEAVIYAAGPLAFRPDHC 166

[Close]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match: tr|A0A2N9IUX6|A0A2N9IUX6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56564 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.4e-49
Identity = 91/165 (55.15%), Postives = 127/165 (76.97%), Query Frame = 0 

Query: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60
           M++  LL L   L+L  +A +DPV    K + + +EG+VYCQ+C+  G+WSL+ AKPI  
Sbjct: 1   MASTQLLILISSLMLFQLAFSDPV----KKIDVVVEGMVYCQSCEHAGSWSLSGAKPIPA 60

Query: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120
           AK+SV+CKN+ DQV +YKV++T+ +GYFYA+L G+ M+  +++HPLQ+C VKPVSSPL +
Sbjct: 61  AKVSVVCKNYKDQVSYYKVFETDGNGYFYAQLEGFTMSQCLVEHPLQSCHVKPVSSPLEN 120

Query: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKC 166
           CNLLTN+NYGL G+PLR+E K ++G+NY A +YAAGPLAF P  C
Sbjct: 121 CNLLTNVNYGLYGSPLRYESKKLLGSNYEAVIYAAGPLAFRPDHC 161

The following BLAST results are available for this feature:
BLAST of CsaV3_5G010340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50679.14.5e-92100.00hypothetical protein Csa_5G211030 [Cucumis sativus][more]
XP_008454812.14.4e-8794.61PREDICTED: non-classical arabinogalactan protein 30 [Cucumis melo][more]
XP_004148198.28.5e-75100.00PREDICTED: proline-rich protein 3 [Cucumis sativus][more]
XP_022942759.19.8e-6383.97non-classical arabinogalactan protein 30 [Cucurbita moschata][more]
XP_023541968.13.7e-6283.21non-classical arabinogalactan protein 30 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_5G010340 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05500.14.5e-4657.66Pollen Ole e 1 allergen and extensin family protein[more]
AT2G34700.14.1e-1531.55Pollen Ole e 1 allergen and extensin family protein[more]
AT2G47530.19.6e-1236.07Pollen Ole e 1 allergen and extensin family protein[more]
AT2G33790.19.6e-1229.10arabinogalactan protein 30[more]
AT1G28290.13.1e-1031.34arabinogalactan protein 31[more]
BLAST of CsaV3_5G010340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93013|AGP30_ARATH1.7e-1029.10Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
sp|Q9FZA2|AGP31_ARATH5.5e-0931.34Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
sp|Q9LZJ7|PRP3_ARATH8.8e-0733.03Proline-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=PRP3 PE=2 SV=1[more]
sp|Q03211|PEXLP_TOBAC5.7e-0631.07Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
BLAST of CsaV3_5G010340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KP60|A0A0A0KP60_CUCSA3.0e-92100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G211030 PE=4 SV=1[more]
tr|A0A1S3BZJ5|A0A1S3BZJ5_CUCME2.9e-8794.61non-classical arabinogalactan protein 30 OS=Cucumis melo OX=3656 GN=LOC103495126... [more]
tr|A0A2P6SLD1|A0A2P6SLD1_ROSCH1.3e-5060.63Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0370811 PE=4... [more]
tr|A0A2I4DYR9|A0A2I4DYR9_9ROSI1.8e-4957.83non-classical arabinogalactan protein 30-like OS=Juglans regia OX=51240 GN=LOC10... [more]
tr|A0A2N9IUX6|A0A2N9IUX6_FAGSY2.4e-4955.15Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56564 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016049 cell growth
biological_process GO:0060560 developmental growth involved in morphogenesis
biological_process GO:0010054 trichoblast differentiation
biological_process GO:0048767 root hair elongation
biological_process GO:0009826 unidimensional cell growth
cellular_component GO:0005575 cellular_component
cellular_component GO:0031982 vesicle
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G010340.1CsaV3_5G010340.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 35..133
e-value: 6.6E-27
score: 93.7
NoneNo IPR availablePANTHERPTHR31614:SF10SUBFAMILY NOT NAMEDcoord: 26..165
NoneNo IPR availablePANTHERPTHR31614FAMILY NOT NAMEDcoord: 26..165

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G010340CSPI05G10870Wild cucumber (PI 183967)cpicucB285
CsaV3_5G010340Cucsa.368350Cucumber (Gy14) v1cgycucB560
CsaV3_5G010340CmaCh04G001410Cucurbita maxima (Rimu)cmacucB0883
CsaV3_5G010340CmoCh04G001370Cucurbita moschata (Rifu)cmocucB0873
CsaV3_5G010340Cp4.1LG01g05600Cucurbita pepo (Zucchini)cpecucB0542
CsaV3_5G010340CsGy5G008210Cucumber (Gy14) v2cgybcucB232
CsaV3_5G010340Carg18380Silver-seed gourdcarcucB0105
CsaV3_5G010340Cla007228Watermelon (97103) v1cucwmB410
CsaV3_5G010340MELO3C018370Melon (DHL92) v3.5.1cucmeB383
CsaV3_5G010340ClCG07G004420Watermelon (Charleston Gray)cucwcgB422
CsaV3_5G010340Lsi04G010800Bottle gourd (USVL1VR-Ls)cuclsiB394
CsaV3_5G010340MELO3C018370.2Melon (DHL92) v3.6.1cucmedB377
CsaV3_5G010340Cla97C07G132890Watermelon (97103) v2cucwmbB407
CsaV3_5G010340Bhi07G000481Wax gourdcucwgoB524
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G010340Cucumber (Chinese Long) v3cuccucB205
CsaV3_5G010340Silver-seed gourdcarcucB0369
CsaV3_5G010340Silver-seed gourdcarcucB0708
CsaV3_5G010340Cucumber (Gy14) v2cgybcucB294
CsaV3_5G010340Cucumber (Gy14) v1cgycucB208
CsaV3_5G010340Cucurbita maxima (Rimu)cmacucB0884
CsaV3_5G010340Cucurbita maxima (Rimu)cmacucB0664
CsaV3_5G010340Cucurbita maxima (Rimu)cmacucB0739
CsaV3_5G010340Cucurbita moschata (Rifu)cmocucB0649
CsaV3_5G010340Cucurbita moschata (Rifu)cmocucB0728
CsaV3_5G010340Cucurbita moschata (Rifu)cmocucB0872
CsaV3_5G010340Cucurbita pepo (Zucchini)cpecucB0541
CsaV3_5G010340Cucurbita pepo (Zucchini)cpecucB0914
CsaV3_5G010340Wild cucumber (PI 183967)cpicucB360
CsaV3_5G010340Bottle gourd (USVL1VR-Ls)cuclsiB359
CsaV3_5G010340Watermelon (Charleston Gray)cucwcgB404
CsaV3_5G010340Watermelon (97103) v1cucwmB456
CsaV3_5G010340Watermelon (97103) v2cucwmbB385
CsaV3_5G010340Wax gourdcucwgoB506