CmoCh04G001370 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G001370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pollen Ole e 1 allergen and extensin family protein
Location	Cmo_Chr04 : 703939 .. 704439 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCTCCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATATCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

mRNA sequence

ATGGAAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCTCCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATATCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

Coding sequence (CDS)

ATGGAAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCTCCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATATCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

Homology

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BLAST of CmoCh04G001370 vs. Swiss-Prot
Match: AGP30_ARATH (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana GN=AGP30 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G+VYC+ C+  G  ++ GAKP+  A + ++CKN  N +S  K  
Sbjct: 98  PPVYPPKYNKTLVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK-- 157

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V ++ ++ C+   + SP + C  +++L+ G  G+ L+   
Sbjct: 158 -TDKNGYFM-----LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVL 217

Query: 143 K----FVVGPKYRAAVYSAGPLAFHP 163
           K      +   ++ +VY+ GP AF P
Sbjct: 218 KPGFSSTIMRWFKYSVYNVGPFAFEP 235

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BLAST of CmoCh04G001370 vs. Swiss-Prot
Match: AGP31_ARATH (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11
Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 1


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G VYC++C+     +L GAKPI GA + ++CK+  N  +     
Sbjct: 218 PPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITA---ET 277

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V +   + C+V  + S    C  ++ L  G  GA L+ +K
Sbjct: 278 TTDKNGYFL-----LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEK 337

Query: 143 KF----VVGPKYRAAVYSAGPLAFHP 163
           K     VV  K    +++ GP AF+P
Sbjct: 338 KLGKSTVVVNKLVYGLFNVGPFAFNP 355

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BLAST of CmoCh04G001370 vs. Swiss-Prot
Match: PRP3_ARATH (Proline-rich protein 3 OS=Arabidopsis thaliana GN=PRP3 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-08
Identity = 45/146 (30.82%), Postives = 65/146 (44.52%), Query Frame = 1


Query: 26  PTPKP----VAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKN------HNNQVS 85
           PT KP    +  AV+G++ C+N  +          PI GAKI ++C +       N +V 
Sbjct: 175 PTTKPYVPEILKAVDGIILCKNGYE--------TYPILGAKIQIVCSDPASYGKSNTEVV 234

Query: 86  FYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAP 145
            Y    T+  GYF+  L   K         L  C+VK   SP+  C   TN+N G+ G P
Sbjct: 235 IYS-NPTDSKGYFHLSLTSIK--------DLAYCRVKLYLSPVETCKNPTNVNKGLTGVP 294

Query: 146 LR-YDKKFVVGPKYRAAVYSAGPLAF 161
           L  Y  +F   P     ++S GP  +
Sbjct: 295 LALYGYRFY--PDKNLELFSVGPFYY 301

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BLAST of CmoCh04G001370 vs. Swiss-Prot
Match: PRP1_ARATH (Proline-rich protein 1 OS=Arabidopsis thaliana GN=PRP1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.6e-07
Identity = 44/146 (30.14%), Postives = 61/146 (41.78%), Query Frame = 1


Query: 23  PPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHN------NQVSF 82
           P +P    +  AV G++ C+N  +          PI GAK  ++C          N+V  
Sbjct: 202 PTKPYVPEIIKAVGGIILCKNGYE--------TYPIQGAKAKIVCSERGSYEKSKNEVVI 261

Query: 83  YKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPL 142
           Y    T+  GYF+  L   K         L  C+VK  +SP+  C   TN+N G+ G P 
Sbjct: 262 YSD-PTDFKGYFHVVLTHIKN--------LSNCRVKLYTSPVETCKNPTNVNKGLTGVPF 321

Query: 143 -----RYDKKFVVGPKYRAAVYSAGP 158
                +  K F VGP Y  A   A P
Sbjct: 322 SMYSDKNLKLFNVGPFYFTAGSKAAP 330

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BLAST of CmoCh04G001370 vs. TrEMBL
Match: A0A0A0KP60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G211030 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-73
Identity = 131/166 (78.92%), Postives = 152/166 (91.57%), Query Frame = 1


Query: 1   MEAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M  K+LLSLS LLLLLHIA+A+P R   KP+++A+EG+VYCQNC+KIG+WSLT AKPI+G
Sbjct: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHN+QV FYKVY+TNK GYFYAELVGY+M HPVLDHPLQACKVKP+SSPLSD
Sbjct: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 167
           C+LLTNLNYG+ GAPLR++KKFVVG  YRAAVY+AGPLAFHP+KCL
Sbjct: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 166

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BLAST of CmoCh04G001370 vs. TrEMBL
Match: A0A0L9UAQ6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g299600 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.2e-48
Identity = 94/169 (55.62%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 1   MEAKSLLSLSLLLLLLHI----AAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAK 60
           M  +   SLSLLLLL+      A  + P+   K + + VE MVYCQ+C   G+WS+ GAK
Sbjct: 1   MAGRHFSSLSLLLLLVAFSYTQATPDVPKTAEKKIEVVVEAMVYCQSCDHFGTWSMIGAK 60

Query: 61  PIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISS 120
           PI  AK+SV CK++N  VS+YKV+ET+K GY YA L G+KM H VLDHPL AC VKP+ S
Sbjct: 61  PIPSAKVSVTCKSYNGHVSYYKVFETDKNGYLYAPLEGFKMQHSVLDHPLHACYVKPVWS 120

Query: 121 PLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           PL  C LL+N+NYG+ GAPLRY+KK + G KY A +Y+AGPLAF P +C
Sbjct: 121 PLESCSLLSNVNYGMNGAPLRYEKKRLHGSKYEAVIYAAGPLAFRPSEC 169

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BLAST of CmoCh04G001370 vs. TrEMBL
Match: A0A0S3S0V0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G411300 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.2e-48
Identity = 94/169 (55.62%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 1   MEAKSLLSLSLLLLLLHI----AAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAK 60
           M  +   SLSLLLLL+      A  + P+   K + + VE MVYCQ+C   G+WS+ GAK
Sbjct: 1   MAGRHFSSLSLLLLLVAFSYTQATPDVPKTAEKKIEVVVEAMVYCQSCDHFGTWSMIGAK 60

Query: 61  PIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISS 120
           PI  AK+SV CK++N  VS+YKV+ET+K GY YA L G+KM H VLDHPL AC VKP+ S
Sbjct: 61  PIPSAKVSVTCKSYNGHVSYYKVFETDKNGYLYAPLEGFKMQHSVLDHPLHACYVKPVWS 120

Query: 121 PLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           PL  C LL+N+NYG+ GAPLRY+KK + G KY A +Y+AGPLAF P +C
Sbjct: 121 PLESCSLLSNVNYGMNGAPLRYEKKRLHGSKYEAVIYAAGPLAFRPSEC 169

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BLAST of CmoCh04G001370 vs. TrEMBL
Match: D7T4L1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01540 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.4e-48
Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 1


Query: 5   SLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKIS 64
           S L LSL    + +A   P +   K  A+ VEGMVYCQ+C + GSWSLTGA+PI  AK+S
Sbjct: 12  SCLLLSLSFPSVTMAEEIPKKTEEKTAAVVVEGMVYCQSCDQFGSWSLTGAEPIPAAKVS 71

Query: 65  VICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLL 124
           VICK+H +QVSFYK +ET+  GYFYAEL G+KM H +LDHPL +C VK +SSPL +C+LL
Sbjct: 72  VICKDHKDQVSFYKAFETDGNGYFYAELDGFKMSHNILDHPLHSCHVKLVSSPLENCNLL 131

Query: 125 TNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           +N+NYG+ G+PLRY+ K + G  Y A +Y+AGPLAF P  C
Sbjct: 132 SNVNYGLYGSPLRYENKRLFGKHYEAVIYAAGPLAFRPAHC 172

[Close]

BLAST of CmoCh04G001370 vs. TrEMBL
Match: A0A067L8M0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01222 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.4e-48
Identity = 90/144 (62.50%), Postives = 107/144 (74.31%), Query Frame = 1


Query: 22  NPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYE 81
           N   P  K V + VEGMVYCQ+C   GSWS  GAKPI  AKISVICKNH  QVS+YK  E
Sbjct: 7   NQAEPEEKKVDVVVEGMVYCQSCDHYGSWSFNGAKPIRSAKISVICKNHRKQVSYYKAVE 66

Query: 82  TNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDKK 141
           T++ GYFYA+L G+KM H +LDHPLQ+C VK +SSPL++C LL+N+NYGI GAPLR++ K
Sbjct: 67  TDENGYFYAQLDGFKMGHSLLDHPLQSCHVKLVSSPLANCSLLSNVNYGIYGAPLRFENK 126

Query: 142 FVVGPKYRAAVYSAGPLAFHPEKC 166
            + G  Y A VYSAGPLAF P  C
Sbjct: 127 ILRGSHYEAVVYSAGPLAFRPAHC 150

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BLAST of CmoCh04G001370 vs. TAIR10
Match: AT5G05500.1 (AT5G05500.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 189.1 bits (479), Expect = 2.2e-48
Identity = 92/175 (52.57%), Postives = 119/175 (68.00%), Query Frame = 1


Query: 1   MEAKSLLSLSLLLLLLHIAAAN---PPRPTP-------KPVAIAVEGMVYCQNCQKIGSW 60
           M++++L    L++L+     AN   PP P P       K V  AVEGMVYCQ+C K GSW
Sbjct: 1   MDSRALPFSVLVILIATAVLANAYTPPPPPPTTAYPAVKTVEAAVEGMVYCQSCDKFGSW 60

Query: 61  SLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACK 120
           SL GA+ IAGAKIS+ICKNH  QVSFYKV+ T+ YG+FY EL G+KM    LDHPL +C+
Sbjct: 61  SLAGAEAIAGAKISIICKNHRQQVSFYKVFRTDSYGHFYGELKGFKMTPHFLDHPLHSCR 120

Query: 121 VKPISSPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
            K +SSP  DC+L +N+N  + GAPLRY++K +    Y A +Y+AGPLAF P+ C
Sbjct: 121 AKLVSSPREDCNLFSNINNALDGAPLRYEEKRLKWTNYEAVIYAAGPLAFRPDHC 175

[Close]

BLAST of CmoCh04G001370 vs. TAIR10
Match: AT2G33790.1 (AT2G33790.1 arabinogalactan protein 30)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-14
Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G+VYC+ C+  G  ++ GAKP+  A + ++CKN  N +S  K  
Sbjct: 98  PPVYPPKYNKTLVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK-- 157

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V ++ ++ C+   + SP + C  +++L+ G  G+ L+   
Sbjct: 158 -TDKNGYFM-----LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVL 217

Query: 143 K----FVVGPKYRAAVYSAGPLAFHP 163
           K      +   ++ +VY+ GP AF P
Sbjct: 218 KPGFSSTIMRWFKYSVYNVGPFAFEP 235

[Close]

BLAST of CmoCh04G001370 vs. TAIR10
Match: AT2G34700.1 (AT2G34700.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-14
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 1


Query: 6   LLSLSLLLLLLH-IAAANPPRPTPKPVA-----IAVEGMVYCQNCQKIGSWSLTGAKPIA 65
           LLS+SL  +  + +++A+P  P   P       +AVEGMVYC++C+  G  +L  A P+ 
Sbjct: 13  LLSISLTFIYTNAVSSASPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQ 72

Query: 66  GAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPI----S 125
           GA + + C N    V+     +T+K GYF+        P  +  +    C+  P     +
Sbjct: 73  GATVKLACNNTKRGVTMET--KTDKNGYFF-----MLAPKKLTTYAFHTCRAWPTNPGPT 132

Query: 126 SPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHP 163
           +    C + + LN GI GA L+  K   +G ++   ++S GP AF P
Sbjct: 133 TATMTCTVPSKLNNGITGAMLKPSKTINIG-EHDYVLFSVGPFAFEP 171

[Close]

BLAST of CmoCh04G001370 vs. TAIR10
Match: AT1G28290.1 (AT1G28290.1 arabinogalactan protein 31)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 1


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G VYC++C+     +L GAKPI GA + ++CK+  N  +     
Sbjct: 218 PPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITA---ET 277

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V +   + C+V  + S    C  ++ L  G  GA L+ +K
Sbjct: 278 TTDKNGYFL-----LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEK 337

Query: 143 KF----VVGPKYRAAVYSAGPLAFHP 163
           K     VV  K    +++ GP AF+P
Sbjct: 338 KLGKSTVVVNKLVYGLFNVGPFAFNP 355

[Close]

BLAST of CmoCh04G001370 vs. TAIR10
Match: AT3G09925.1 (AT3G09925.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 1


Query: 33  IAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAEL 92
           I V G V CQ+C       + G++PI GA +S+ C +   +VS+Y    T++ G F   +
Sbjct: 36  IHVAGKVMCQDCSLNYDEWINGSEPIKGAVVSITCMDERRRVSYYGSDLTDERGQFDL-M 95

Query: 93  VGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPL-------RYDKKFVVG 149
           V   + H  +  P Q C V+ +SSP   C++ TN   G  G  L       R   K+VVG
Sbjct: 96  VNKVLSHGKVLKP-QLCNVRLVSSPDLSCNIPTNFGNGQTGVKLVRPFTVFRDLVKYVVG 155

[Close]

BLAST of CmoCh04G001370 vs. NCBI nr
Match: gi|659109661|ref|XP_008454812.1| (PREDICTED: uncharacterized protein LOC103495126 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 3.7e-74
Identity = 134/167 (80.24%), Postives = 154/167 (92.22%), Query Frame = 1


Query: 1   MEAKSLLSLS-LLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIA 60
           M  K+LLSLS LLLLLLHIA+ANP RP  KP+++AVEG+VYCQNC+K+G+WSLT AKPI+
Sbjct: 1   MSTKNLLSLSFLLLLLLHIASANPVRPPHKPLSVAVEGLVYCQNCKKVGTWSLTEAKPIS 60

Query: 61  GAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLS 120
           GAKISVICKNHN+QV FYKVY+TNK GYFYAELVGY+M HPVLDHPLQACKVKP+SSPLS
Sbjct: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120

Query: 121 DCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 167
           DC+LLTNLNYG+ GAPLRY+KKFV+G  YRAAVY+AGPLAFHP+KCL
Sbjct: 121 DCNLLTNLNYGLTGAPLRYEKKFVLGHNYRAAVYAAGPLAFHPQKCL 167

[Close]

BLAST of CmoCh04G001370 vs. NCBI nr
Match: gi|700195502|gb|KGN50679.1| (hypothetical protein Csa_5G211030 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73
Identity = 131/166 (78.92%), Postives = 152/166 (91.57%), Query Frame = 1


Query: 1   MEAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M  K+LLSLS LLLLLHIA+A+P R   KP+++A+EG+VYCQNC+KIG+WSLT AKPI+G
Sbjct: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHN+QV FYKVY+TNK GYFYAELVGY+M HPVLDHPLQACKVKP+SSPLSD
Sbjct: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 167
           C+LLTNLNYG+ GAPLR++KKFVVG  YRAAVY+AGPLAFHP+KCL
Sbjct: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 166

[Close]

BLAST of CmoCh04G001370 vs. NCBI nr
Match: gi|778701337|ref|XP_004148198.2| (PREDICTED: proline-rich protein 3 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.7e-63
Identity = 111/134 (82.84%), Postives = 127/134 (94.78%), Query Frame = 1


Query: 33  IAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAEL 92
           +A+EG+VYCQNC+KIG+WSLT AKPI+GAKISVICKNHN+QV FYKVY+TNK GYFYAEL
Sbjct: 1   MAIEGLVYCQNCKKIGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAEL 60

Query: 93  VGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAV 152
           VGY+M HPVLDHPLQACKVKP+SSPLSDC+LLTNLNYG+ GAPLR++KKFVVG  YRAAV
Sbjct: 61  VGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAV 120

Query: 153 YSAGPLAFHPEKCL 167
           Y+AGPLAFHP+KCL
Sbjct: 121 YAAGPLAFHPQKCL 134

[Close]

BLAST of CmoCh04G001370 vs. NCBI nr
Match: gi|747075664|ref|XP_011084877.1| (PREDICTED: pistil-specific extensin-like protein [Sesamum indicum])

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 96/164 (58.54%), Postives = 123/164 (75.00%), Query Frame = 1


Query: 3   AKSLLSLSLLLLLLH-IAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGA 62
           A+ +  + LL L +H IAA  PP+P  K V + VEG+VYCQ+C   GSWSLTGAKPI  A
Sbjct: 4   AQLITIIPLLFLAIHTIAAHEPPKPAEKAVDVVVEGVVYCQSCNSYGSWSLTGAKPIESA 63

Query: 63  KISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDC 122
            +SVICK+H N+VSFYK + T+  GYFYAEL G++M H  LDHPLQACKVK ++SP+  C
Sbjct: 64  TVSVICKDHRNRVSFYKAFATDGNGYFYAELKGFRMSHYFLDHPLQACKVKLVASPMEAC 123

Query: 123 DLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           ++L+N+NYG+ GAPLRY++K +VG  Y A VY+AGPLAF P  C
Sbjct: 124 NVLSNVNYGLYGAPLRYEEKRLVGSNYEAVVYAAGPLAFRPAHC 167

[Close]

BLAST of CmoCh04G001370 vs. NCBI nr
Match: gi|764633987|ref|XP_011469935.1| (PREDICTED: proline-rich protein 3-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48
Identity = 96/160 (60.00%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 6   LLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISV 65
           +L  SLLL  L    +       K + + VEGMVYCQ+C   G+WS+TGAKPI  AK+SV
Sbjct: 8   VLVSSLLLTALAFFPSTTATEYQKKIDVVVEGMVYCQSCDHYGTWSMTGAKPIPSAKVSV 67

Query: 66  ICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLT 125
           ICKNH +QVSFYK ++TN  GYFYA L G+KM H +LDHPLQAC VKP+SSPL DC  L+
Sbjct: 68  ICKNHKDQVSFYKAFQTNADGYFYAPLDGFKMNH-MLDHPLQACHVKPVSSPLEDCRFLS 127

Query: 126 NLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           N+NYG+ GAPLRY+ K V+G  Y A VYSAGPLAF P+ C
Sbjct: 128 NVNYGLNGAPLRYEDKRVMGSNYEAVVYSAGPLAFRPQHC 166

The following BLAST results are available for this feature:

BLAST of CmoCh04G001370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP30_ARATH	1.1e-12	31.51	Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana GN=AGP30 PE=2 S...	[more]
AGP31_ARATH	3.4e-11	32.88	Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 S...	[more]
PRP3_ARATH	4.6e-08	30.82	Proline-rich protein 3 OS=Arabidopsis thaliana GN=PRP3 PE=2 SV=1	[more]
PRP1_ARATH	6.6e-07	30.14	Proline-rich protein 1 OS=Arabidopsis thaliana GN=PRP1 PE=2 SV=1	[more]

BLAST of CmoCh04G001370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP60_CUCSA	2.8e-73	78.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G211030 PE=4 SV=1	[more]
A0A0L9UAQ6_PHAAN	3.2e-48	55.62	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g299600 PE=4 SV=1	[more]
A0A0S3S0V0_PHAAN	3.2e-48	55.62	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G411300 PE=...	[more]
D7T4L1_VITVI	5.4e-48	57.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01540 PE=4 SV=...	[more]
A0A067L8M0_JATCU	5.4e-48	62.50	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01222 PE=4 SV=1	[more]

BLAST of CmoCh04G001370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05500.1	2.2e-48	52.57	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G33790.1	5.9e-14	31.51	arabinogalactan protein 30	[more]
AT2G34700.1	5.9e-14	30.54	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G28290.1	1.9e-12	32.88	arabinogalactan protein 31	[more]
AT3G09925.1	3.1e-10	34.15	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of CmoCh04G001370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109661\|ref\|XP_008454812.1\|	3.7e-74	80.24	PREDICTED: uncharacterized protein LOC103495126 [Cucumis melo]	[more]
gi\|700195502\|gb\|KGN50679.1\|	4.1e-73	78.92	hypothetical protein Csa_5G211030 [Cucumis sativus]	[more]
gi\|778701337\|ref\|XP_004148198.2\|	1.7e-63	82.84	PREDICTED: proline-rich protein 3 [Cucumis sativus]	[more]
gi\|747075664\|ref\|XP_011084877.1\|	2.2e-50	58.54	PREDICTED: pistil-specific extensin-like protein [Sesamum indicum]	[more]
gi\|764633987\|ref\|XP_011469935.1\|	1.6e-48	60.00	PREDICTED: proline-rich protein 3-like [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010054	trichoblast differentiation
biological_process	GO:0016049	cell growth
biological_process	GO:0060560	developmental growth involved in morphogenesis
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009826	unidimensional cell growth
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031982	vesicle
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G001370.1	CmoCh04G001370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33470	FAMILY NOT NAMED	coord: 9..165 score: 4.4
None	No IPR available	PANTHER	PTHR33470:SF5	SUBFAMILY NOT NAMED	coord: 9..165 score: 4.4
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 35..133 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G001370	Cucsa.368350	Cucumber (Gy14) v1	cgycmoB1022
CmoCh04G001370	CmaCh04G001410	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G001370	Cla007228	Watermelon (97103) v1	cmowmB685
CmoCh04G001370	Csa5G211030	Cucumber (Chinese Long) v2	cmocuB737
CmoCh04G001370	MELO3C018370	Melon (DHL92) v3.5.1	cmomeB635
CmoCh04G001370	ClCG07G004420	Watermelon (Charleston Gray)	cmowcgB676
CmoCh04G001370	CSPI05G10870	Wild cucumber (PI 183967)	cmocpiB747
CmoCh04G001370	Lsi04G010800	Bottle gourd (USVL1VR-Ls)	cmolsiB663
CmoCh04G001370	Cp4.1LG01g05600	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G001370	MELO3C018370.2	Melon (DHL92) v3.6.1	cmomedB722
CmoCh04G001370	CsaV3_5G010340	Cucumber (Chinese Long) v3	cmocucB0873
CmoCh04G001370	Cla97C07G132890	Watermelon (97103) v2	cmowmbB755
CmoCh04G001370	Bhi07G000481	Wax gourd	cmowgoB0889
CmoCh04G001370	CsGy5G008210	Cucumber (Gy14) v2	cgybcmoB652
CmoCh04G001370	Carg18380	Silver-seed gourd	carcmoB0123

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G001370	Silver-seed gourd	carcmoB0924
CmoCh04G001370	Cucumber (Chinese Long) v3	cmocucB0806
CmoCh04G001370	Watermelon (97103) v2	cmowmbB721
CmoCh04G001370	Wax gourd	cmowgoB0884
CmoCh04G001370	Cucurbita moschata (Rifu)	cmocmoB187
CmoCh04G001370	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G001370	Cucurbita maxima (Rimu)	cmacmoB239
CmoCh04G001370	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G001370	Wild cucumber (PI 183967)	cmocpiB692
CmoCh04G001370	Cucumber (Chinese Long) v2	cmocuB678
CmoCh04G001370	Melon (DHL92) v3.5.1	cmomeB661
CmoCh04G001370	Watermelon (Charleston Gray)	cmowcgB649
CmoCh04G001370	Watermelon (97103) v1	cmowmB669
CmoCh04G001370	Cucurbita pepo (Zucchini)	cmocpeB674
CmoCh04G001370	Cucurbita pepo (Zucchini)	cmocpeB695
CmoCh04G001370	Bottle gourd (USVL1VR-Ls)	cmolsiB639
CmoCh04G001370	Cucumber (Gy14) v2	cgybcmoB125