CsaV3_5G008220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G008220
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionE3 ubiquitin-protein ligase RING1-like
Locationchr5 : 4953167 .. 4957229 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACATCCAAAATGATTTTAGATCATATTATAAAAAACAGAAAAATGTTAATTGAATTTTATTTTTTTAAAAAAAAGAGATGGATAAAAAGGAAGGGAATAAAAGAGTTGGTGGTGGAAGCGTTGAAAAGTTAAACTATGAAGCGGCAAACGGGTAGTCAGTCGGGGGAAGTACACAGCATCTTGGAGATCTCGTAACGCCGTTAAATTGAACGAAGAAGATTGGGACCACGTGTCCCCAAACTGAAAAAGGCGTTGCTAAGACGCTAACAGTAACGAAGACGACGCGGTTTTACCGTTTAAAGCCAATTTTTCTCTTCGTTCCATTTTCTGTTTTCTTTACAAAATTCCCAAAATCAAATCCTCTGCCCTTTCAAACCTTTTCCACCCCCAATTTCGTTGGCCCCACTGTTTCTAGGGTTCTTTAATCGAATCCCCCATTTCCCAATTCACACTCTCCTAATTCAATTCAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTCCTTTTTTTTTTGTTTTGTTTTTAATTTGACTTCATTTTTCTTTTTGGGGTTCGTGGCCGACATTTTGATCGTGGGGGGGGCGTTGCGTTTTGTTTTTGTTTCTGGGGTTGTTCGTTTCTGTTGTTTTCTGGTCCTGGTAGGATTGAAAGTTTGTGGGATCTTTGATTTGTGGGGTTGGTGATTGGTTTGATTGAGTTTTGTTGATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGTCACCGTTGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACATCCCTCGAGGTTGGTGAACGTGGAAGCTGCGCCGCGGAGGAGATTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGAAGATCTCGGAGGAATGGAGGGGATCGCTCGCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTCCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCCGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCGAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATTATTTGGCAACTGAGTCACACTGTGCTGTTTGTAAAGAAGCATTCGAATTGGGAACCGAAGCACGGGAGATGCCCTGTAAGCATATTTATCATTGTGATTGTATTTTACCGTGGCTTTCCATTCGAAATTCTTGTCCAGTTTGTCGTCACGAATTACCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGGTTTGCGGTAGGGCGGTTTCATGGTGGCAGGAGAGGGGGGGAGAGAGAGCTCCCGGTTGTTTACACTGAAGTGGATGGCGGTTTTACTAATGGTGGTCTTCCTAGAAGAGTATCATTTGCTTCTAGAGGCAGGGGTAGGGAGAGAGGCAGGTGGGGCCAAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCAAGGAGTAGTAGACCACTTCCGCATTTCAATAGCGAGCCAAGGCGACGGCGTACATGGTCTATGGAGGTTAACAGCGGAACAATCAGCTGGTGATTTGGGAATTTGGTTGGTTAGGAAAGTTAATTACTTGAAGAAGTTCTAGCTGGGATTGGGACTTTGAGGGATAGGCTTATTTATTGCTGTAAATAGCAAAATTTGAACTTGGGTGGGAATGGATGCAGTTCTCCCAGCTTTATATTGATCAAAATCAGAGTTTCTCGGGTGAAGAAGATTTTTTTTCTCCTTTTTGGGTTATTTGATAAGAGATATTGCAATAGAAATGTGGAAAATAAATGCAGTCATCCTTAAGCGGAAGAAAAGAAGAGAGGTACCTCCTACTGCATTAGAAAATGATGGAAAACACAAGGTTTACATTTAAATGCTTGAAGGTTCTTTAGTAGAGCAAGGTGCATAATCCCATTAATATAGTCTTTTAGAAACCAGTCTCAGAGATGGAGCTAGAGCACTTGCAACTTCGTATCTTTACAATATCTGCTATCAAGTATTTACTACTTAAATATGTTGTTAGGCTCAGTTTTTTTTTTTTTTTCCTTCTTAATATGATTCGGTTATTTTAAAGAATATGTGAGCTCTTGTGATGCACATGATGAATACTGCATCAAGTTAATTACTTGCTTGACTATTGTTTTTCACATCTTATGCTTGTAATGATGATGTATATTGCTAGAAATAAATTGCTTTATTGGCGTTTGTATTCAACTGGCTGCTAACCAGTGTTCATATTTAAATTCAAGAGCTCTCCATAGTCCATACTTGGTTAACCTGTTATGTGCCTTTATATTAGAGTCGGTGTGATTAGATTTAGATTCCTACTTATTGGGCTGAGATCTTGGCTTATTCTTCTATTTGCTTAATCATTGTAGAGGGGTTCAGATTGATAATAGATTTAGATTCCTATTAGTAGTGTCTATTGTAATGTTAGGGAGATTGATGATCTGAGTTATATTCTTAGCTTGTTCTTCTATTTGCTGAATCATTGGTTTTGTACCTTTTATCTCGTGTTTAGCAAGAAGCAAACTGTTCTTAATGAGACAAACAGTAACTCTTGATTATTTCCACCCTTGATGAGATAAGAGGAACTTTTCTCGAAAAGGTTTGGCATCAAAATTTTGATTGGATTGATTTTGAAATTATGTTGCCGAACATCAATCTGTAAGATAAAAGACCATGCAACACGTGGTAGAAACTGGAATTTTGAAATATTCTTCTCAGGCTATGCTACTGTTTTCTAACAGTTGTGTTGGTAGACTGCAATTAGGAGCTAAATTATAATAGAAAACTATCCAATACCGAAGACTACAGGATACATGGTTAATGTTGTGGACTAGTTCAGGCTATTCCATTTTTGTTCAATCAACAAATCGTAGTTTTTATGTGTGTTACGTATAACTCCATCCTGATTTTGAGGTCTCAAATCCAAGTTCTCAATTGAGCTTAATACCAAAAGCCCTTGATGTCTCCCGTGTTCGAGTCCTGGGACAGGTGTGGATGCTATAGGGCGTAGGGGGCGAAGTTCCTACTCCTGGTTACTAGTTATAAATATTAGTAATAGCGCTAGATTTATTTGGTCCAAGTAGGGGAATTTTTAGCATGTTTCTACTGTCACTTTCGCAAGTGCACATTCTCTGGATGCCTTCGGTTATATGAGATATAGCTATACGCTTTTTAAAAGTTTATAGAGTAACTTGTAGATTTCTTTTTCAAAAGAGACATGAAGTAGTTGTATTTCTTTGTCACTGAGATTTTTGGTAATGATTTAGATGGAGGATTACAGAAAAGACTCTTTCATTGGAATCAGAGATTCAGAAGGAACCATGGAACCAATGGAAGTGAGGGAATCTTGTTGGTCTGGTTTGATGAGATATAAAACAGAAGATTAGTCTGTGGGTTTGATTTCAATTCTTACGGCTTCATCAGTTTCGATTTGTTTGGTGGATTGATGAGTTTGGCAGTTTTCTGGTGTAGGGGTCCTTTGAGAAGACAACTGCTATATTGGAACCTAACTTTTAGTTGAGGAAAGTATAGGTAAAGAGTTGGTGTTTTGAGAGTTACTAAGGCAGCATCCTCAAACAACAGTTTGGTAGGTGTGTAAGAGTTGTCTTGAGGAAGAGAAGTATTCTTTCTTGCTGGGTTGGTATTGTTCAAATAAAAAAAAGAAAGCTAACTTCTATAATAATATATTATTTTGATACTTGTATAAGACATGTTTTTTGTTGGTGG

mRNA sequence

ATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGTCACCGTTGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACATCCCTCGAGGTTGGTGAACGTGGAAGCTGCGCCGCGGAGGAGATTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGAAGATCTCGGAGGAATGGAGGGGATCGCTCGCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTCCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCCGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCGAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATTATTTGGCAACTGAGTCACACTGTGCTGTTTGTAAAGAAGCATTCGAATTGGGAACCGAAGCACGGGAGATGCCCTGTAAGCATATTTATCATTGTGATTGTATTTTACCGTGGCTTTCCATTCGAAATTCTTGTCCAGTTTGTCGTCACGAATTACCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGGTTTGCGGTAGGGCGGTTTCATGGTGGCAGGAGAGGGGGGGAGAGAGAGCTCCCGGTTGTTTACACTGAAGTGGATGGCGGTTTTACTAATGGTGGTCTTCCTAGAAGAGTATCATTTGCTTCTAGAGGCAGGGGTAGGGAGAGAGGCAGGTGGGGCCAAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCAAGGAGTAGTAGACCACTTCCGCATTTCAATAGCGAGCCAAGGCGACGGCGTACATGGTCTATGGAGGTTAACAGCGGAACAATCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGTCACCGTTGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACATCCCTCGAGGTTGGTGAACGTGGAAGCTGCGCCGCGGAGGAGATTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGAAGATCTCGGAGGAATGGAGGGGATCGCTCGCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTCCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCCGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCGAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATTATTTGGCAACTGAGTCACACTGTGCTGTTTGTAAAGAAGCATTCGAATTGGGAACCGAAGCACGGGAGATGCCCTGTAAGCATATTTATCATTGTGATTGTATTTTACCGTGGCTTTCCATTCGAAATTCTTGTCCAGTTTGTCGTCACGAATTACCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGGTTTGCGGTAGGGCGGTTTCATGGTGGCAGGAGAGGGGGGGAGAGAGAGCTCCCGGTTGTTTACACTGAAGTGGATGGCGGTTTTACTAATGGTGGTCTTCCTAGAAGAGTATCATTTGCTTCTAGAGGCAGGGGTAGGGAGAGAGGCAGGTGGGGCCAAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCAAGGAGTAGTAGACCACTTCCGCATTTCAATAGCGAGCCAAGGCGACGGCGTACATGGTCTATGGAGGTTAACAGCGGAACAATCAGCTGGTGA

Protein sequence

MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFTNGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLPHFNSEPRRRRTWSMEVNSGTISW
Homology
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BLAST of CsaV3_5G008220 vs. NCBI nr
Match: XP_004147682.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50563.1 hypothetical protein Csa_5G182680 [Cucumis sativus])

HSP 1 Score: 785.8 bits (2028), Expect = 6.7e-224
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HFNSEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

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BLAST of CsaV3_5G008220 vs. NCBI nr
Match: XP_008461689.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 771.5 bits (1991), Expect = 1.3e-219
Identity = 376/383 (98.17%), Postives = 380/383 (99.22%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCSHFVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           +LATESHCAVCKEAFELG EAREMPCKHIYHCDCILPWLS+RNSCPVCRHELPSDNQNSL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGGLPRRVSFASRGRGRERG WG+MIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HFNSEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

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BLAST of CsaV3_5G008220 vs. NCBI nr
Match: XP_022138905.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 737.3 bits (1902), Expect = 2.7e-209
Identity = 358/383 (93.47%), Postives = 371/383 (96.87%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCS FVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSGLRRSRRNGGDRS FNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           +L TESHCAVCKEAFELG EAREMPCKHIYH DCILPWLSIRNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENGG VTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGG+PRRVSFASRGRGRERG W +++RN+FACFGGSMRS ASTS+S +DSGPSRSSRPLP
Sbjct: 301 NGGVPRRVSFASRGRGRERGGWSRILRNLFACFGGSMRSTASTSSSPTDSGPSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HFN+EPR+RRTWSMEVNSGT+SW
Sbjct: 361 HFNTEPRQRRTWSMEVNSGTMSW 383

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BLAST of CsaV3_5G008220 vs. NCBI nr
Match: XP_022987501.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima])

HSP 1 Score: 722.6 bits (1864), Expect = 6.9e-205
Identity = 350/383 (91.38%), Postives = 368/383 (96.08%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCS FVRV NQDSVVCPDCNSGF+EQIEHPSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           +L TESHCAVCKEAFELGTEAREMPCKHIYH DCILPWLSIRNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLT+WRLPGGGFAVGRF+GGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTVWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGG+PRR+SFASRGRGRERG W ++IRNMFACF GSMRS++STSNST DSG SRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSGSSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HF +EPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

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BLAST of CsaV3_5G008220 vs. NCBI nr
Match: XP_022957087.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata])

HSP 1 Score: 715.7 bits (1846), Expect = 8.5e-203
Identity = 348/383 (90.86%), Postives = 365/383 (95.30%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCS FVRV NQDSVVCPDCNSGF+EQIEHPSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSG NLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGPNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           +L TESHCAVCKEAFELGTEAREMPCKHIYH DCILPWLSIRNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLTIWRLPGGGFAVGRF+GGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGG+PRR+SFASRGRGRERG W ++I NMFACF GSMRS++STSNST DS  SRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIGNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HF +EPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CsaV3_5G008220 vs. TAIR10
Match: AT2G39720.1 (RING-H2 finger C2A)

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-77
Identity = 175/365 (47.95%), Postives = 215/365 (58.90%), Query Frame = 0 

Query: 6   AASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMI 65
           A+ SYWC+ CS FV VS  DS+ CPDC+ GF+E I+ P     ++  P   F        
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEP-----LDFTPSDSFXXXXXXXX 61

Query: 66  GNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLR------------------GPSDG--S 125
                                 D SP  P IV R                   PS    S
Sbjct: 62  XXXXXXXXXXXXXXXXXXSMHADNSP-TPTIVTRTXXXXXXXXXXXXRGSAAAPSSDVVS 121

Query: 126 EAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFENP 185
           E  +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E+P
Sbjct: 122 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 181

Query: 186 PASKAAIESMPTIQICENYLA--TESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLS 245
           PASK+AIE++P I+I   +L   ++SHCAVCKE F L + AREMPC HIYH DCILPWL+
Sbjct: 182 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 241

Query: 246 IRNSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEEN--VGLTIWRLPGGGFAVGRFH 305
           IRNSCPVCRHELP+++    D   +     + T+  EE+   GLTIWRLPGGGFAVGR  
Sbjct: 242 IRNSCPVCRHELPAEDLT--DGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIP 301

Query: 306 GGRRGGERELPVVYTEVDGG-FTNGGLPRRVSFASR------GRGRER-GRWGQMIRNMF 336
           GG RGG+R +PVVYTEVDGG   +  LPRRV++ SR      G  RER G +   I  +F
Sbjct: 302 GGWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLF 356

[Close]
BLAST of CsaV3_5G008220 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 273.1 bits (697), Expect = 2.6e-73
Identity = 160/315 (50.79%), Postives = 193/315 (61.27%), Query Frame = 0 

Query: 15  CSHFVRV------SNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGNR 74
           C+ FV V      +   SV CP C+ GF+EQI   S      AA     PA+        
Sbjct: 23  CTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST------- 82

Query: 75  SNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGES-------RRFELYYDDGG 134
                N              R  FNPVIVL+G +   E GE        R FE YYDDG 
Sbjct: 83  EVRSINXXXXXXXXXXXXXXRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGS 142

Query: 135 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFENPPASKAAIESMPTIQICE 194
           GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  NPPASK+AIES+P ++I +
Sbjct: 143 GSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISD 202

Query: 195 NYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSD-NQN 254
            ++ +E++CAVC E FE  TEAREMPCKH++H DCI+PWLSIRNSCPVCR ELPS+ N+ 
Sbjct: 203 CHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRR 262

Query: 255 SLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG 311
           S              +N E+N VG+TIWRLPGGGFAVGRF+   R GER LPVV TE+DG
Sbjct: 263 S-------------NNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDG 312

[Close]
BLAST of CsaV3_5G008220 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 167/378 (44.18%), Postives = 208/378 (55.03%), Query Frame = 0 

Query: 12  CHRCSHFVRV-SNQDS---VVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGN 71
           C+ C+ F+ V  +QD+   V+CP CN GF+E+IE  S   +  AA     P        +
Sbjct: 33  CYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN--STVAAIPASTPEVRSVEETH 92

Query: 72  RSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAG--ESRRFELYYDDGGGSGL 131
           RS                                         E R +E YYDDG GSGL
Sbjct: 93  RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATRERRAYEFYYDDGSGSGL 152

Query: 132 RPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFENPPASKAAIESMPTIQICENYLA 191
           RPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  NPPASK+AIES+P ++I + +  
Sbjct: 153 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 212

Query: 192 TESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSLDAA 251
            E++CAVC E FE G E REMPCKHI+H DCI+PWLSIRNSCPVCR ELPSD        
Sbjct: 213 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQ----- 272

Query: 252 ESGENGGSVTSNGEEN-VGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGG--FT 311
                     SN EE+ VG+TIWRLPGGGFAVGRF+ G R GER LPVV TE+DGG   +
Sbjct: 273 ---------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGS 332

Query: 312 NGGLPRRVSFA----------SRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDS 369
           N G PRR+S+           + GR    GR  + +R M +       S  S++++  D 
Sbjct: 333 NEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDL 392

[Close]
BLAST of CsaV3_5G008220 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 86/245 (35.10%), Postives = 135/245 (55.10%), Query Frame = 0 

Query: 5   AAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIE----HPSRLVNVEAAPRRR---- 64
           ++ +++WCHRC   VR+  Q+  VC  C  GFVE+++     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPAAAMYM---IGNRSNSGQNLGSGLRRSRRNGGDRSP-FNPVIVLRGPSDGSEAGES 124
               A +++M   +  RS+  +  G    R+  +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRG----RTISSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIE 184
               L+  +GG  G+     +  ++  G G + L EQLS     G  R   PPA ++AI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIQICENYL-ATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCR 235
           ++PTI+I + +L +++S+C VCK+ FELG+EA++MPC HIYH DCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 236

[Close]
BLAST of CsaV3_5G008220 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 7.8e-33
Identity = 90/266 (33.83%), Postives = 136/266 (51.13%), Query Frame = 0 

Query: 8   SSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIE-HPSRL-VNVEAAP----RRRFPAAA 67
           +++WCHRC   V +  +D+ VC  C  GFVE+I+  PSR   +VE  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGG 127
              +  RS   +  G   R         S   P+++  G +    AG        + +G 
Sbjct: 66  RSRLAERSYDREISG---RLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGA 125

Query: 128 GSGLR-PLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 187
             G+      +  ++  G G + L+EQLS    +G      PPA K++I+++PTI+I + 
Sbjct: 126 APGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQK 185

Query: 188 YL-ATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNS 247
           +L +++SHC VCK+ FEL +EA++MPC HIYH DCI+PWL   NSCPVCR ELPS   +S
Sbjct: 186 HLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSS 245

Query: 248 LDAAESGENGGSVTSNGEENVGLTIW 266
              +          ++   N+   +W
Sbjct: 246 STQSXXXXXXXGRENSRRRNIFSNLW 263

[Close]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.2e-76
Identity = 175/365 (47.95%), Postives = 215/365 (58.90%), Query Frame = 0 

Query: 6   AASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMI 65
           A+ SYWC+ CS FV VS  DS+ CPDC+ GF+E I+ P     ++  P   F        
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEP-----LDFTPSDSFXXXXXXXX 61

Query: 66  GNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLR------------------GPSDG--S 125
                                 D SP  P IV R                   PS    S
Sbjct: 62  XXXXXXXXXXXXXXXXXXSMHADNSP-TPTIVTRTXXXXXXXXXXXXRGSAAAPSSDVVS 121

Query: 126 EAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFENP 185
           E  +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E+P
Sbjct: 122 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 181

Query: 186 PASKAAIESMPTIQICENYLA--TESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLS 245
           PASK+AIE++P I+I   +L   ++SHCAVCKE F L + AREMPC HIYH DCILPWL+
Sbjct: 182 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 241

Query: 246 IRNSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEEN--VGLTIWRLPGGGFAVGRFH 305
           IRNSCPVCRHELP+++    D   +     + T+  EE+   GLTIWRLPGGGFAVGR  
Sbjct: 242 IRNSCPVCRHELPAEDLT--DGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIP 301

Query: 306 GGRRGGERELPVVYTEVDGG-FTNGGLPRRVSFASR------GRGRER-GRWGQMIRNMF 336
           GG RGG+R +PVVYTEVDGG   +  LPRRV++ SR      G  RER G +   I  +F
Sbjct: 302 GGWRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLF 356

[Close]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.8e-72
Identity = 160/315 (50.79%), Postives = 193/315 (61.27%), Query Frame = 0 

Query: 15  CSHFVRV------SNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGNR 74
           C+ FV V      +   SV CP C+ GF+EQI   S      AA     PA+        
Sbjct: 23  CTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST------- 82

Query: 75  SNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGES-------RRFELYYDDGG 134
                N              R  FNPVIVL+G +   E GE        R FE YYDDG 
Sbjct: 83  EVRSINXXXXXXXXXXXXXXRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGS 142

Query: 135 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFENPPASKAAIESMPTIQICE 194
           GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  NPPASK+AIES+P ++I +
Sbjct: 143 GSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISD 202

Query: 195 NYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSD-NQN 254
            ++ +E++CAVC E FE  TEAREMPCKH++H DCI+PWLSIRNSCPVCR ELPS+ N+ 
Sbjct: 203 CHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRR 262

Query: 255 SLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG 311
           S              +N E+N VG+TIWRLPGGGFAVGRF+   R GER LPVV TE+DG
Sbjct: 263 S-------------NNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDG 312

[Close]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.3e-66
Identity = 167/378 (44.18%), Postives = 208/378 (55.03%), Query Frame = 0 

Query: 12  CHRCSHFVRV-SNQDS---VVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGN 71
           C+ C+ F+ V  +QD+   V+CP CN GF+E+IE  S   +  AA     P        +
Sbjct: 33  CYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN--STVAAIPASTPEVRSVEETH 92

Query: 72  RSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAG--ESRRFELYYDDGGGSGL 131
           RS                                         E R +E YYDDG GSGL
Sbjct: 93  RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATRERRAYEFYYDDGSGSGL 152

Query: 132 RPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFENPPASKAAIESMPTIQICENYLA 191
           RPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  NPPASK+AIES+P ++I + +  
Sbjct: 153 RPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTK 212

Query: 192 TESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSLDAA 251
            E++CAVC E FE G E REMPCKHI+H DCI+PWLSIRNSCPVCR ELPSD        
Sbjct: 213 AEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQ----- 272

Query: 252 ESGENGGSVTSNGEEN-VGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGG--FT 311
                     SN EE+ VG+TIWRLPGGGFAVGRF+ G R GER LPVV TE+DGG   +
Sbjct: 273 ---------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGS 332

Query: 312 NGGLPRRVSFA----------SRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDS 369
           N G PRR+S+           + GR    GR  + +R M +       S  S++++  D 
Sbjct: 333 NEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRVRPSRGSSNSNVIDL 392

[Close]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-32
Identity = 86/245 (35.10%), Postives = 135/245 (55.10%), Query Frame = 0 

Query: 5   AAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIE----HPSRLVNVEAAPRRR---- 64
           ++ +++WCHRC   VR+  Q+  VC  C  GFVE+++     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPAAAMYM---IGNRSNSGQNLGSGLRRSRRNGGDRSP-FNPVIVLRGPSDGSEAGES 124
               A +++M   +  RS+  +  G    R+  +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRG----RTISSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIE 184
               L+  +GG  G+     +  ++  G G + L EQLS     G  R   PPA ++AI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIQICENYL-ATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCR 235
           ++PTI+I + +L +++S+C VCK+ FELG+EA++MPC HIYH DCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 236

[Close]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31
Identity = 85/282 (30.14%), Postives = 145/282 (51.42%), Query Frame = 0 

Query: 10  YWCHRCSHFVRVS---NQDSVVCPDCNSGFVEQIEHPS-------RLVNVEAAPRR---- 69
           ++C++C+  V V+         CP CN GF+E+ ++P+          N  + P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ------------RFPAAAMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSD 129
                        FP+              N  S    +R   GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSXXXXXXXXXXXIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPP 189
              +  ++   +  ++    G R LP ++ ++ +G G ++L++QL++ + N   R+  PP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPN---RYGTPP 202

Query: 190 ASKAAIESMPTIQICENYLATE-SHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIR 249
           ASK+AIE++P + I ++ L +E + CAVC + FE GTEA++MPCKH+YH DC+LPWL + 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

Query: 250 NSCPVCRHELPSDN---QNSLDAAESGENGGSVTSNGEENVG 262
           NSCPVCRHELP+D+   +  +  A+    G    ++G+ + G
Sbjct: 263 NSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDG 300

[Close]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match: tr|A0A0A0KLW4|A0A0A0KLW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182680 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 4.4e-224
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HFNSEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match: tr|A0A1S3CGL6|A0A1S3CGL6_CUCME (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 8.6e-220
Identity = 376/383 (98.17%), Postives = 380/383 (99.22%), Query Frame = 0 

Query: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCSHFVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240
           +LATESHCAVCKEAFELG EAREMPCKHIYHCDCILPWLS+RNSCPVCRHELPSDNQNSL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360
           NGGLPRRVSFASRGRGRERG WG+MIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFNSEPRRRRTWSMEVNSGTISW 384
           HFNSEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match: tr|W9R2B5|W9R2B5_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis OX=981085 GN=L484_025341 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.1e-142
Identity = 272/390 (69.74%), Postives = 309/390 (79.23%), Query Frame = 0 

Query: 5   AAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSR-LVNVEAAPRRRFPAAAMY 64
           +A SSYWC+RCS FVRV N D+VVCPDC+ GFVE+IE+P +  V+V    RRRFPAAAMY
Sbjct: 3   SARSSYWCYRCSRFVRVWNDDAVVCPDCDGGFVEEIENPPQPAVHVGGPRRRRFPAAAMY 62

Query: 65  MIG----NRSNSGQNLGSG--LRRSRRNGGDRSPFNPVIVLRGPSDG---SEAGESRRFE 124
           MIG    N  +S     SG  LRR+RRNGGDRSPFNPVIVLRG  DG            E
Sbjct: 63  MIGAAQRNAPSSSDRNDSGPILRRTRRNGGDRSPFNPVIVLRGSPDGXXXXXXXXXXXXE 122

Query: 125 LYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPT 184
           LYYDDGGGSGLRPLP SMSEFLLGSGFDRLLEQLSQIE+NGIGR E PPASKAAIESMPT
Sbjct: 123 LYYDDGGGSGLRPLPASMSEFLLGSGFDRLLEQLSQIEINGIGRLEQPPASKAAIESMPT 182

Query: 185 IQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPS 244
           I+I +++++TESHCAVCKE FELGTEAREMPCKHIYH +CILPWLS+ NSCPVCRHELP+
Sbjct: 183 IEIDDSHISTESHCAVCKEPFELGTEAREMPCKHIYHPECILPWLSLHNSCPVCRHELPA 242

Query: 245 DNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTE 304
           D  NS +     ENG  +T N EENVGLTIWRLPGGGFAVGRF GGRRGGERELPVVYTE
Sbjct: 243 DAPNSSEP----ENGQPLTPNEEENVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 302

Query: 305 VDGGFTNGGLPRRVSFASRG-RGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPS 364
           +DGGF NGGLPRR+S++SRG RGRERG   ++ RN+FACF G+ R+  S S+S+S+S P+
Sbjct: 303 MDGGFNNGGLPRRISWSSRGSRGRERGGLRRVFRNLFACFSGN-RASGSDSSSSSESRPA 362

Query: 365 RSSRPLPHFNSE--PRRRRTWSMEVNSGTI 382
           R  R L H  +   PRRRRTWSMEVNSG +
Sbjct: 363 RRVRSLAHSGATDGPRRRRTWSMEVNSGGV 387

[Close]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match: tr|A0A2P5CIX6|A0A2P5CIX6_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_283160 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 8.0e-141
Identity = 278/398 (69.85%), Postives = 311/398 (78.14%), Query Frame = 0 

Query: 3   SMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHP-SRLVNVEAAPRRRFPAAA 62
           S    SSYWC+RCS FVRV N DSVVCPDC++GFVE IE+P +R V+V  + RRRFPAAA
Sbjct: 2   SSTTTSSYWCYRCSRFVRVWNDDSVVCPDCDTGFVEAIENPTTRSVHV-GSGRRRFPAAA 61

Query: 63  MYMIGN------RSNSGQ-NLGSGLRRSRRNGGDRSPFNPVIVLRGPSD----GSEAGES 122
           MYMIG        SNS + N G   RR+RRNGGDRSPFNPVIVLRG SD           
Sbjct: 62  MYMIGGGGGHRPGSNSDRSNSGPISRRTRRNGGDRSPFNPVIVLRGSSDXXXXXXXXXXX 121

Query: 123 RRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIE 182
             FELYYDDGGGSGLRPLP SMSEFLLGSGFDRLLEQLSQIE+ GIGR E PPASKAAIE
Sbjct: 122 XXFELYYDDGGGSGLRPLPASMSEFLLGSGFDRLLEQLSQIEIIGIGRLEQPPASKAAIE 181

Query: 183 SMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRH 242
           SMPTI+I ++++  ESHCAVCKEAFELG EAREMPCKHIYH DCILPWLS+ NSCPVCRH
Sbjct: 182 SMPTIEIDDSHVTMESHCAVCKEAFELGHEAREMPCKHIYHTDCILPWLSLHNSCPVCRH 241

Query: 243 ELPSDNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPV 302
           ELP+D  NS   AES ENG ++T N EENVGLTIWRLPGGGFAVGRF GGRRGGERELPV
Sbjct: 242 ELPTDTPNS---AES-ENGQTLTPNEEENVGLTIWRLPGGGFAVGRFSGGRRGGERELPV 301

Query: 303 VYTEVDGGFTNGGLPRRVSFASRG-RGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSD 362
           VYTE+DGGF NGGLPRR+S++SRG RGRERG   ++ RN+FACFGG+ RS AS S+S SD
Sbjct: 302 VYTEMDGGFNNGGLPRRISWSSRGSRGRERGGLSRIFRNLFACFGGT-RSSASVSSSGSD 361

Query: 363 SGPSRSSRPLPHFNSE------PRRRRTWSMEVNSGTI 382
           S  + S+R +    ++      PRRRRTWSMEVN G I
Sbjct: 362 SRSATSARRIRSLTNQGNSAAAPRRRRTWSMEVNGGGI 393

[Close]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match: tr|V7CZ69|V7CZ69_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G233700g PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.5e-131
Identity = 245/385 (63.64%), Postives = 284/385 (73.77%), Query Frame = 0 

Query: 5   AAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYM 64
           +  SSYWC+RCS F+RV   D+VVCPDC+SGF+E+IEHP R V+++   RRRFPAAAMYM
Sbjct: 4   SGTSSYWCYRCSRFIRVLRHDAVVCPDCDSGFIEEIEHPPRSVHLDPR-RRRFPAAAMYM 63

Query: 65  IGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRG---PSDGSEAGESRRFELYYDDGG 124
           IG R  S       LRR+RRNGGDRSPFNPVIVLRG    +  S   ESR FEL+YDDG 
Sbjct: 64  IGQRPASDNAARPALRRTRRNGGDRSPFNPVIVLRGGAAATSASSEDESRGFELFYDDGA 123

Query: 125 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENY 184
           GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIE+NGIGR+E+PPASKAAI+S+PTI+I + +
Sbjct: 124 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDDTH 183

Query: 185 LATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSLD 244
           LA ESHCAVCKEAFELGT  REMPCKHIYH +CILPWL++ NSCPVCRHELP+D+ N ++
Sbjct: 184 LAMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSN-VN 243

Query: 245 AAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFTN 304
           +                  GLTIWRLPGGGFAVGRF GGRRG ERELPVVYTE+DGGF N
Sbjct: 244 SNAXXXXXXXXXXXXXXXXGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNN 303

Query: 305 GGLPRRVSFASRG-RGRERGRWGQMIRNMFACFGGSMRSIA--STSNSTSDSGPSRSSRP 364
           GG PRR+S++SRG RGRE G   +  RN+F CF G + S    +T  ST           
Sbjct: 304 GGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGTNATQRSTXXXXXXXXXXX 363

Query: 365 LPHFNSEPRRRRTWSMEVNSGTISW 384
                  PR RRTWSM+VNSG  +W
Sbjct: 364 XXXXXPSPRSRRTWSMDVNSGMRAW 386

The following BLAST results are available for this feature:
BLAST of CsaV3_5G008220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147682.16.7e-224100.00PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50563.1 ... [more]
XP_008461689.11.3e-21998.17PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
XP_022138905.12.7e-20993.47probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia][more]
XP_022987501.16.9e-20591.38probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima][more]
XP_022957087.18.5e-20390.86probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata][more]
BLAST of CsaV3_5G008220 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G39720.12.3e-7747.95RING-H2 finger C2A[more]
AT5G59550.12.6e-7350.79zinc finger (C3HC4-type RING finger) family protein[more]
AT3G46620.11.3e-6744.18zinc finger (C3HC4-type RING finger) family protein[more]
AT2G40830.22.0e-3335.10RING-H2 finger C1A[more]
AT3G56580.27.8e-3333.83RING/U-box superfamily protein[more]
BLAST of CsaV3_5G008220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22283|RHC2A_ARATH4.2e-7647.95Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
sp|Q940T5|RDUF2_ARATH4.8e-7250.79E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
sp|Q9SNB6|RDUF1_ARATH2.3e-6644.18E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
sp|O22197|RHC1A_ARATH3.7e-3235.10Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
sp|P0CH30|RING1_GOSHI1.4e-3130.14E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
BLAST of CsaV3_5G008220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLW4|A0A0A0KLW4_CUCSA4.4e-224100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182680 PE=4 SV=1[more]
tr|A0A1S3CGL6|A0A1S3CGL6_CUCME8.6e-22098.17E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103500230 P... [more]
tr|W9R2B5|W9R2B5_9ROSA1.1e-14269.74E3 ubiquitin-protein ligase RING1 OS=Morus notabilis OX=981085 GN=L484_025341 PE... [more]
tr|A0A2P5CIX6|A0A2P5CIX6_9ROSA8.0e-14169.8543kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_283160 PE=... [more]
tr|V7CZ69|V7CZ69_PHAVU1.5e-13163.64Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G233700g PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR010543DUF1117
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0044765 single-organism transport
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0046873 metal ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G008220.1CsaV3_5G008220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 188..228
e-value: 2.2E-6
score: 37.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 187..229
e-value: 4.6E-10
score: 39.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 188..229
score: 11.84
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 9..40
e-value: 2.7E-13
score: 49.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..360
NoneNo IPR availablePANTHERPTHR44274:SF3E3 UBIQUITIN-PROTEIN LIGASE RDUF1-RELATEDcoord: 3..378
NoneNo IPR availablePANTHERPTHR44274FAMILY NOT NAMEDcoord: 3..378
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 188..229
e-value: 2.49561E-23
score: 90.4548
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 168..235
IPR010543Domain of unknown function DUF1117PFAMPF06547DUF1117coord: 260..357
e-value: 2.4E-34
score: 118.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 153..235
e-value: 3.0E-18
score: 67.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G008220CSPI05G09780Wild cucumber (PI 183967)cpicucB285
CsaV3_5G008220CSPI03G32170Wild cucumber (PI 183967)cpicucB168
CsaV3_5G008220CSPI06G14310Wild cucumber (PI 183967)cpicucB362
CsaV3_5G008220Cucsa.165190Cucumber (Gy14) v1cgycucB264
CsaV3_5G008220Cucsa.175590Cucumber (Gy14) v1cgycucB284
CsaV3_5G008220CmaCh04G002050Cucurbita maxima (Rimu)cmacucB0883
CsaV3_5G008220CmaCh06G002850Cucurbita maxima (Rimu)cmacucB0992
CsaV3_5G008220CmaCh20G003890Cucurbita maxima (Rimu)cmacucB0663
CsaV3_5G008220CmaCh02G007890Cucurbita maxima (Rimu)cmacucB0738
CsaV3_5G008220CmaCh04G011750Cucurbita maxima (Rimu)cmacucB0884
CsaV3_5G008220CmoCh04G012460Cucurbita moschata (Rifu)cmocucB0872
CsaV3_5G008220CmoCh06G002860Cucurbita moschata (Rifu)cmocucB0977
CsaV3_5G008220CmoCh14G001260Cucurbita moschata (Rifu)cmocucB0298
CsaV3_5G008220CmoCh20G004220Cucurbita moschata (Rifu)cmocucB0648
CsaV3_5G008220CmoCh02G007890Cucurbita moschata (Rifu)cmocucB0727
CsaV3_5G008220CmoCh04G002060Cucurbita moschata (Rifu)cmocucB0873
CsaV3_5G008220Cp4.1LG05g09400Cucurbita pepo (Zucchini)cpecucB0913
CsaV3_5G008220Cp4.1LG16g06240Cucurbita pepo (Zucchini)cpecucB0347
CsaV3_5G008220Cp4.1LG01g10790Cucurbita pepo (Zucchini)cpecucB0541
CsaV3_5G008220Cp4.1LG01g05030Cucurbita pepo (Zucchini)cpecucB0542
CsaV3_5G008220Cp4.1LG03g02620Cucurbita pepo (Zucchini)cpecucB0773
CsaV3_5G008220CsGy6G014160Cucumber (Gy14) v2cgybcucB296
CsaV3_5G008220CsGy5G007130Cucumber (Gy14) v2cgybcucB232
CsaV3_5G008220CsGy3G029990Cucumber (Gy14) v2cgybcucB136
CsaV3_5G008220Carg18330Silver-seed gourdcarcucB0105
CsaV3_5G008220Carg00257Silver-seed gourdcarcucB0708
CsaV3_5G008220Cla003999Watermelon (97103) v1cucwmB416
CsaV3_5G008220Cla013320Watermelon (97103) v1cucwmB455
CsaV3_5G008220Cla017911Watermelon (97103) v1cucwmB392
CsaV3_5G008220MELO3C023875Melon (DHL92) v3.5.1cucmeB370
CsaV3_5G008220MELO3C009244Melon (DHL92) v3.5.1cucmeB405
CsaV3_5G008220ClCG10G021300Watermelon (Charleston Gray)cucwcgB368
CsaV3_5G008220ClCG02G020000Watermelon (Charleston Gray)cucwcgB403
CsaV3_5G008220ClCG07G003490Watermelon (Charleston Gray)cucwcgB422
CsaV3_5G008220Lsi04G008950Bottle gourd (USVL1VR-Ls)cuclsiB387
CsaV3_5G008220Lsi10G013920Bottle gourd (USVL1VR-Ls)cuclsiB358
CsaV3_5G008220Lsi03G021210Bottle gourd (USVL1VR-Ls)cuclsiB379
CsaV3_5G008220MELO3C023875.2Melon (DHL92) v3.6.1cucmedB362
CsaV3_5G008220MELO3C009244.2Melon (DHL92) v3.6.1cucmedB399
CsaV3_5G008220Cla97C10G204500Watermelon (97103) v2cucwmbB370
CsaV3_5G008220Cla97C02G045990Watermelon (97103) v2cucwmbB384
CsaV3_5G008220Cla97C07G131770Watermelon (97103) v2cucwmbB407
CsaV3_5G008220Bhi06G000860Wax gourdcucwgoB476
CsaV3_5G008220Bhi11G001887Wax gourdcucwgoB444
CsaV3_5G008220Bhi10G000586Wax gourdcucwgoB505
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_5G008220CsaV3_3G034750Cucumber (Chinese Long) v3cuccucB129
CsaV3_5G008220CsaV3_6G016680Cucumber (Chinese Long) v3cuccucB207
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G008220Cucumber (Chinese Long) v3cuccucB038
CsaV3_5G008220Cucumber (Chinese Long) v3cuccucB170
CsaV3_5G008220Cucumber (Chinese Long) v3cuccucB196
CsaV3_5G008220Cucumber (Gy14) v2cgybcucB040
CsaV3_5G008220Cucumber (Gy14) v2cgybcucB182
CsaV3_5G008220Cucumber (Gy14) v1cgycucB059
CsaV3_5G008220Cucurbita maxima (Rimu)cmacucB0575
CsaV3_5G008220Cucurbita maxima (Rimu)cmacucB0805
CsaV3_5G008220Cucurbita maxima (Rimu)cmacucB1032
CsaV3_5G008220Cucurbita moschata (Rifu)cmocucB0563
CsaV3_5G008220Cucurbita moschata (Rifu)cmocucB0869
CsaV3_5G008220Cucurbita moschata (Rifu)cmocucB0789
CsaV3_5G008220Cucurbita moschata (Rifu)cmocucB1015
CsaV3_5G008220Cucurbita pepo (Zucchini)cpecucB0090
CsaV3_5G008220Cucurbita pepo (Zucchini)cpecucB1068
CsaV3_5G008220Wild cucumber (PI 183967)cpicucB046
CsaV3_5G008220Wild cucumber (PI 183967)cpicucB232
CsaV3_5G008220Wild cucumber (PI 183967)cpicucB293
CsaV3_5G008220Bottle gourd (USVL1VR-Ls)cuclsiB365
CsaV3_5G008220Bottle gourd (USVL1VR-Ls)cuclsiB376
CsaV3_5G008220Melon (DHL92) v3.5.1cucmeB399
CsaV3_5G008220Melon (DHL92) v3.5.1cucmeB421
CsaV3_5G008220Melon (DHL92) v3.6.1cucmedB414
CsaV3_5G008220Watermelon (Charleston Gray)cucwcgB406
CsaV3_5G008220Watermelon (Charleston Gray)cucwcgB408
CsaV3_5G008220Watermelon (97103) v1cucwmB391
CsaV3_5G008220Watermelon (97103) v1cucwmB409
CsaV3_5G008220Watermelon (97103) v1cucwmB448
CsaV3_5G008220Watermelon (97103) v2cucwmbB390