CmoCh04G002060 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G002060
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein
LocationCmo_Chr04 : 1021063 .. 1022229 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGAGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCATATTGAAATGAACAGCATTGGGCAATTTGAAACCCCTCCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATGACCTCGAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAAGCAGCTGGTGA

mRNA sequence

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGAGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCATATTGAAATGAACAGCATTGGGCAATTTGAAACCCCTCCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATGACCTCGAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAAGCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGAGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCATATTGAAATGAACAGCATTGGGCAATTTGAAACCCCTCCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATGACCTCGAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAAGCAGCTGGTGA
Homology
[Close]
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.4e-85
Identity = 199/406 (49.01%), Postives = 246/406 (60.59%), Query Frame = 1 

Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPL------SLRNMETAPRR---R 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL      S     T   R   R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  FP-----ASAMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------S 125
           FP     +S      H  NS     + + R R N   RSP NPVIVLRG          S
Sbjct: 62  FPPPSSSSSTPSASMHADNS--PTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVS 121

Query: 126 EGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMN---SIGQFETP 185
           EG +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+S IE+N   ++   E P
Sbjct: 122 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 181

Query: 186 PASKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLS 245
           PASKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+
Sbjct: 182 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 241

Query: 246 IRNSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGG 305
           IRNSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG
Sbjct: 242 IRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 301

Query: 306 RRGGERELPVVYTEVDGA-FTNGGVPRRVSFGSRR-----GRGRER-GGWRRFVRNMFGC 365
            RGG+R +PVVYTEVDG    +  +PRRV++GSRR     G  RER GG+   +  +FGC
Sbjct: 302 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGC 361

Query: 366 F--RQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQRRTW 378
           F      + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 FSGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.4e-76
Identity = 188/402 (46.77%), Postives = 234/402 (58.21%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQE------SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV     +      SV CP C+ GF+EQI+   S     T P       A
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIP-------A 75

Query: 68  MYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
              +   +N+R+   S IRR  R  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  STEVRSINNNRR---SVIRR--RRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLS IE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRVSF----------GSRRGRGRERGG-WRRFVRNMFGCFR 367
           TE+DG    GG+      PRR+S+           +  G G   GG  RR VR M    R
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMR 375

Query: 368 Q-QPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQ 374
           + +P R   SS+A  S+SS +   +    SR L + N+  R+
Sbjct: 376 RVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRR 390

[Close]
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-75
Identity = 178/370 (48.11%), Postives = 215/370 (58.11%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQES----VVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+      +   +     PAS   
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIE------DSSNSTVAAIPASTPE 88

Query: 68  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG------------ESR 127
           +       R    S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  VRSVEETHR----SIIRRRRSNR--RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLS IE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQDSLDAAEIGVNGGSMTSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSD--------------PIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVSF------------GSRRGRGRERGGWRRFVRNMFGCF 344
           PVV TE+DG    +N G PRR+S+            G R G G   G  RR VR M    
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNG---GRLRRAVRGMVSFM 368

[Close]
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-35
Identity = 93/278 (33.45%), Postives = 150/278 (53.96%), Query Frame = 1 

Query: 10  YWCYRCSRFVRAS---NQESVVCPDCNSGFVEQIDHPLSLR-------NMETAPRRRFP- 69
           ++CY+C+R V  +         CP CN GF+E+ D+P   +       N  + P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ------ASAMYMIGHRSNSRQNLGSA--------IRRPRRNG-GDRSPFNPVIVLRGPPD 129
                 AS + ++   S+S     SA        +  P R+G GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPP 189
                 ++   +  ++ +  G R LP ++ ++ +G G ++L++QL+  + N  G   TPP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPP 202

Query: 190 ASKSAIESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 249
           ASKSAIE++P + I +++L +E + CAVC + FE G EA++MPC H+YH DC+LPWL + 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

Query: 250 NSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENG 261
           NSCPVCRHELP+D+ D  +    G  G S  ++ D +G
Sbjct: 263 NSCPVCRHELPTDDPD-YERRVRGAQGTSGGNDGDNSG 295

[Close]
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-31
Identity = 79/269 (29.37%), Postives = 141/269 (52.42%), Query Frame = 1 

Query: 10  YWCYRCSRFVRASNQESV--VCPDCNSGFVEQIDHPLSLRNMETAPRRRF-------PAS 69
           ++CY+C++ V  S   S    CP CN GF+E+ + P   +++   P           P S
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  AMYMIGHRSNSR-------QNLGSAIRRPRRNGGDRSP----FNPVIVLRGPPDGSEGGE 129
            +  +   S++         +L     +P+     ++P    F+P   L+          
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSG 140

Query: 130 SRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAI 189
           +  FE   ++        +P +  ++  G G ++L++QL+  + N  G   TPPASKSAI
Sbjct: 141 TH-FEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 200

Query: 190 ESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVC 249
           +++PT+++ ++ L++E + CAVC + FE G++ ++MPC H++H DC+LPWL + NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

Query: 250 RHELPSDNQDSLDAAEIGVNGGSMTSNVD 258
           R ELP+D+ D  + ++     G    +V+
Sbjct: 261 RFELPTDDPDYENRSQGSQGSGDGQGSVE 285

[Close]
BLAST of CmoCh04G002060 vs. TrEMBL
Match: A0A0A0KLW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G182680 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 5.1e-182
Identity = 324/388 (83.51%), Postives = 346/388 (89.18%), Query Frame = 1 

Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWC+RCS FVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNS QNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           +L TESHCAVCKEAFELG EAREMPC HIYH DCILPWLSIRNSCPVCRHELPSDNQ+SL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGG+PRRVSF S RGRGRERG W + +RNMF CF    MRS A+ TS+S+ DSGPSR  S
Sbjct: 301 NGGLPRRVSFAS-RGRGRERGRWGQMIRNMFACFGGS-MRSIAS-TSNSTSDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
           SRPLP  N+EPR+RRTWSMEVNSGT SW
Sbjct: 361 SRPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CmoCh04G002060 vs. TrEMBL
Match: W9R2B5_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_025341 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.7e-135
Identity = 259/390 (66.41%), Postives = 293/390 (75.13%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +A SSYWCYRCSRFVR  N ++VVCPDC+ GFVE+I++P         PRRR FPA+AMY
Sbjct: 3   SARSSYWCYRCSRFVRVWNDDAVVCPDCDGGFVEEIENPPQPAVHVGGPRRRRFPAAAMY 62

Query: 65  MIGHR------SNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG---ESRRFE 124
           MIG        S+ R + G  +RR RRNGGDRSPFNPVIVLRG PDG  GG   E R FE
Sbjct: 63  MIGAAQRNAPSSSDRNDSGPILRRTRRNGGDRSPFNPVIVLRGSPDGGGGGGEGEGRGFE 122

Query: 125 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPT 184
           LYYDDG GSGLRPLP SMSEFLLGSGFDRLLEQLS IE+N IG+ E PPASK+AIESMPT
Sbjct: 123 LYYDDGGGSGLRPLPASMSEFLLGSGFDRLLEQLSQIEINGIGRLEQPPASKAAIESMPT 182

Query: 185 IRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPS 244
           I I ++H+ TESHCAVCKE FELG EAREMPC HIYH +CILPWLS+ NSCPVCRHELP+
Sbjct: 183 IEIDDSHISTESHCAVCKEPFELGTEAREMPCKHIYHPECILPWLSLHNSCPVCRHELPA 242

Query: 245 DNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTE 304
           D  +S +      NG  +T N +EN GLTIWRLPGGGFAVGRF GGRRGGERELPVVYTE
Sbjct: 243 DAPNSSEPE----NGQPLTPNEEENVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 302

Query: 305 VDGAFTNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSG 364
           +DG F NGG+PRR+S+ SR  RGRERGG RR  RN+F CF     R+S +  SSSS +S 
Sbjct: 303 MDGGFNNGGLPRRISWSSRGSRGRERGGLRRVFRNLFACFSGN--RASGS-DSSSSSESR 362

Query: 365 PSRSSSSRPLPQMNAEPRQRRTWSMEVNSG 385
           P+R   S         PR+RRTWSMEVNSG
Sbjct: 363 PARRVRSLAHSGATDGPRRRRTWSMEVNSG 385

[Close]
BLAST of CmoCh04G002060 vs. TrEMBL
Match: V7CZ69_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G233700g PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.4e-131
Identity = 249/394 (63.20%), Postives = 286/394 (72.59%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +  SSYWCYRCSRF+R    ++VVCPDC+SGF+E+I+HP   R++   PRRR FPA+AMY
Sbjct: 4   SGTSSYWCYRCSRFIRVLRHDAVVCPDCDSGFIEEIEHPP--RSVHLDPRRRRFPAAAMY 63

Query: 65  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRG---PPDGSEGGESRRFELYYDDG 124
           MIG R  S      A+RR RRNGGDRSPFNPVIVLRG       S   ESR FEL+YDDG
Sbjct: 64  MIGQRPASDNAARPALRRTRRNGGDRSPFNPVIVLRGGAAATSASSEDESRGFELFYDDG 123

Query: 125 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 184
            GSGLRPLPPSMSEFLLGSGFDRLLEQLS IE+N IG++E PPASK+AI+S+PTI I + 
Sbjct: 124 AGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDDT 183

Query: 185 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSD----- 244
           HL  ESHCAVCKEAFELG   REMPC HIYH +CILPWL++ NSCPVCRHELP+D     
Sbjct: 184 HLAMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSNVN 243

Query: 245 -NQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTE 304
            N +S     +G+       N +EN GLTIWRLPGGGFAVGRF GGRRG ERELPVVYTE
Sbjct: 244 SNANSNPPQNVGL-------NEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTE 303

Query: 305 VDGAFTNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSG 364
           +DG F NGG PRR+S+ SR  RGRE GG  RF RN+FGCFR     S    T  S+    
Sbjct: 304 MDGGFNNGGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGTNATQRSTSSRE 363

Query: 365 PSRSSSSRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
             R+SSSR    M+  PR RRTWSM+VNSG  +W
Sbjct: 364 SMRASSSR--SSMDPSPRSRRTWSMDVNSGMRAW 386

[Close]
BLAST of CmoCh04G002060 vs. TrEMBL
Match: A0A0S3RZL8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G363300 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 5.9e-130
Identity = 245/388 (63.14%), Postives = 285/388 (73.45%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +  SSYWCYRCSRFVR   Q++VVCPDC+ GF+E+I+HP   R++   PRRR FPA+AMY
Sbjct: 4   SGTSSYWCYRCSRFVRVFRQDAVVCPDCDGGFIEEIEHPP--RSVLLDPRRRRFPAAAMY 63

Query: 65  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG---ESRRFELYYDDG 124
           MIG R  S       +RR RRNGGDRSPFNPVIVLRG    +      ESR FEL+YDDG
Sbjct: 64  MIGQRPASDNAARPFLRRTRRNGGDRSPFNPVIVLRGSAAATSATSEEESRGFELFYDDG 123

Query: 125 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 184
            GSGL PLPPSMSEFLLGSGFDRLLEQLS IE+N IG++E PPASK+AI+S+PTI I   
Sbjct: 124 AGSGLSPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDNT 183

Query: 185 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 244
           HL  ESHCAVCKEAFELG   REMPC HIYH +CILPWL++ NSCPVCRHELP+D+ ++ 
Sbjct: 184 HLTMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSNAN 243

Query: 245 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 304
             A       ++  N +EN GLTIWRLPGGGFAVGRF GGRRG ERELPVVYTE+DG F 
Sbjct: 244 SNANSNPPQ-NVGLNEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFN 303

Query: 305 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 364
           NGG PRR+S+ SR  RGRE GG  RF RN+FGCFR     S ++ T  S+      R+SS
Sbjct: 304 NGGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGSSTTQRSASSRESMRASS 363

Query: 365 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
           SR    M+  PR RRTWSM+VNSG  +W
Sbjct: 364 SRS--SMDPSPRSRRTWSMDVNSGMRAW 386

[Close]
BLAST of CmoCh04G002060 vs. TrEMBL
Match: A0A0L9U8T3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g257000 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 5.9e-130
Identity = 245/388 (63.14%), Postives = 285/388 (73.45%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +  SSYWCYRCSRFVR   Q++VVCPDC+ GF+E+I+HP   R++   PRRR FPA+AMY
Sbjct: 4   SGTSSYWCYRCSRFVRVFRQDAVVCPDCDGGFIEEIEHPP--RSVLLDPRRRRFPAAAMY 63

Query: 65  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG---ESRRFELYYDDG 124
           MIG R  S       +RR RRNGGDRSPFNPVIVLRG    +      ESR FEL+YDDG
Sbjct: 64  MIGQRPASDNAARPFLRRTRRNGGDRSPFNPVIVLRGSAAATSATSEEESRGFELFYDDG 123

Query: 125 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 184
            GSGL PLPPSMSEFLLGSGFDRLLEQLS IE+N IG++E PPASK+AI+S+PTI I   
Sbjct: 124 AGSGLSPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDNT 183

Query: 185 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 244
           HL  ESHCAVCKEAFELG   REMPC HIYH +CILPWL++ NSCPVCRHELP+D+ ++ 
Sbjct: 184 HLTMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSNAN 243

Query: 245 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 304
             A       ++  N +EN GLTIWRLPGGGFAVGRF GGRRG ERELPVVYTE+DG F 
Sbjct: 244 SNANSNPPQ-NVGLNEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFN 303

Query: 305 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 364
           NGG PRR+S+ SR  RGRE GG  RF RN+FGCFR     S ++ T  S+      R+SS
Sbjct: 304 NGGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGSSTTQRSASSRESMRASS 363

Query: 365 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
           SR    M+  PR RRTWSM+VNSG  +W
Sbjct: 364 SRS--SMDPSPRSRRTWSMDVNSGMRAW 386

[Close]
BLAST of CmoCh04G002060 vs. TAIR10
Match: AT2G39720.1 (AT2G39720.1 RING-H2 finger C2A)

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-86
Identity = 199/406 (49.01%), Postives = 246/406 (60.59%), Query Frame = 1 

Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPL------SLRNMETAPRR---R 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL      S     T   R   R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  FP-----ASAMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------S 125
           FP     +S      H  NS     + + R R N   RSP NPVIVLRG          S
Sbjct: 62  FPPPSSSSSTPSASMHADNS--PTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVS 121

Query: 126 EGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMN---SIGQFETP 185
           EG +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+S IE+N   ++   E P
Sbjct: 122 EGLDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHP 181

Query: 186 PASKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLS 245
           PASKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+
Sbjct: 182 PASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 241

Query: 246 IRNSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGG 305
           IRNSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG
Sbjct: 242 IRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 301

Query: 306 RRGGERELPVVYTEVDGA-FTNGGVPRRVSFGSRR-----GRGRER-GGWRRFVRNMFGC 365
            RGG+R +PVVYTEVDG    +  +PRRV++GSRR     G  RER GG+   +  +FGC
Sbjct: 302 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGC 361

Query: 366 F--RQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQRRTW 378
           F      + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 FSGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]
BLAST of CmoCh04G002060 vs. TAIR10
Match: AT5G59550.1 (AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 286.2 bits (731), Expect = 3.0e-77
Identity = 188/402 (46.77%), Postives = 234/402 (58.21%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQE------SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV     +      SV CP C+ GF+EQI+   S     T P       A
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTIP-------A 75

Query: 68  MYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
              +   +N+R+   S IRR  R  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  STEVRSINNNRR---SVIRR--RRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLS IE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRVSF----------GSRRGRGRERGG-WRRFVRNMFGCFR 367
           TE+DG    GG+      PRR+S+           +  G G   GG  RR VR M    R
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMR 375

Query: 368 Q-QPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQ 374
           + +P R   SS+A  S+SS +   +    SR L + N+  R+
Sbjct: 376 RVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRR 390

[Close]
BLAST of CmoCh04G002060 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 284.6 bits (727), Expect = 8.8e-77
Identity = 178/370 (48.11%), Postives = 215/370 (58.11%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQES----VVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+      +   +     PAS   
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIE------DSSNSTVAAIPASTPE 88

Query: 68  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG------------ESR 127
           +       R    S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  VRSVEETHR----SIIRRRRSNR--RTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLS IE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQDSLDAAEIGVNGGSMTSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSD--------------PIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVSF------------GSRRGRGRERGGWRRFVRNMFGCF 344
           PVV TE+DG    +N G PRR+S+            G R G G   G  RR VR M    
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNG---GRLRRAVRGMVSFM 368

[Close]
BLAST of CmoCh04G002060 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-34
Identity = 93/244 (38.11%), Postives = 133/244 (54.51%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSL--RNMETAPR----RRFPASA 67
           +++WC+RC R V    +++V C  C  GFVE+ID   S   R++E  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDAV-CSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGHRSNSRQ---NLGSAIRRPRRNGGDRSPFNPVIVLRGP-PDGSEGGESRRFELYY 127
              +  RS  R+    LGSA           S   P+++  G  P    GG++   E + 
Sbjct: 66  RSRLAERSYDREISGRLGSA------GSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFV 125

Query: 128 DDGT-GSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIR 187
           +    G G+     +  ++  G G + L+EQLS    +       PPA KS+I+++PTI+
Sbjct: 126 NGAAPGIGIAR-GTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIK 185

Query: 188 ICENHLET-ESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSD 240
           I + HL++ +SHC VCK+ FEL +EA++MPC HIYHSDCI+PWL   NSCPVCR ELPS 
Sbjct: 186 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 237

[Close]
BLAST of CmoCh04G002060 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-32
Identity = 79/269 (29.37%), Postives = 141/269 (52.42%), Query Frame = 1 

Query: 10  YWCYRCSRFVRASNQESV--VCPDCNSGFVEQIDHPLSLRNMETAPRRRF-------PAS 69
           ++CY+C++ V  S   S    CP CN GF+E+ + P   +++   P           P S
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  AMYMIGHRSNSR-------QNLGSAIRRPRRNGGDRSP----FNPVIVLRGPPDGSEGGE 129
            +  +   S++         +L     +P+     ++P    F+P   L+          
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSG 140

Query: 130 SRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAI 189
           +  FE   ++        +P +  ++  G G ++L++QL+  + N  G   TPPASKSAI
Sbjct: 141 TH-FEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 200

Query: 190 ESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVC 249
           +++PT+++ ++ L++E + CAVC + FE G++ ++MPC H++H DC+LPWL + NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

Query: 250 RHELPSDNQDSLDAAEIGVNGGSMTSNVD 258
           R ELP+D+ D  + ++     G    +V+
Sbjct: 261 RFELPTDDPDYENRSQGSQGSGDGQGSVE 285

[Close]
BLAST of CmoCh04G002060 vs. NCBI nr
Match: gi|659123486|ref|XP_008461689.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 652.5 bits (1682), Expect = 4.6e-184
Identity = 327/388 (84.28%), Postives = 347/388 (89.43%), Query Frame = 1 

Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCS FVR SNQ+SVVCPDCNSGFVEQI+ P  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNS QNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HL TESHCAVCKEAFELGNEAREMPC HIYH DCILPWLS+RNSCPVCRHELPSDNQ+SL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGG+PRRVSF S RGRGRERGGW R +RNMF CF    MRS A+ TS+S+ DSGPSR  S
Sbjct: 301 NGGLPRRVSFAS-RGRGRERGGWGRMIRNMFACFGGS-MRSIAS-TSNSTSDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
           SRPLP  N+EPR+RRTWSMEVNSGT SW
Sbjct: 361 SRPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CmoCh04G002060 vs. NCBI nr
Match: gi|449459896|ref|XP_004147682.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 645.2 bits (1663), Expect = 7.3e-182
Identity = 324/388 (83.51%), Postives = 346/388 (89.18%), Query Frame = 1 

Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWC+RCS FVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNS QNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           +L TESHCAVCKEAFELG EAREMPC HIYH DCILPWLSIRNSCPVCRHELPSDNQ+SL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGG+PRRVSF S RGRGRERG W + +RNMF CF    MRS A+ TS+S+ DSGPSR  S
Sbjct: 301 NGGLPRRVSFAS-RGRGRERGRWGQMIRNMFACFGGS-MRSIAS-TSNSTSDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
           SRPLP  N+EPR+RRTWSMEVNSGT SW
Sbjct: 361 SRPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]
BLAST of CmoCh04G002060 vs. NCBI nr
Match: gi|1009120304|ref|XP_015876849.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 503.4 bits (1295), Expect = 3.4e-139
Identity = 265/399 (66.42%), Postives = 302/399 (75.69%), Query Frame = 1 

Query: 8   SSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMYMIG- 67
           SS+WCYRCSRFVR SN E+VVCPDC+SGFVE+ID+P    ++++  RRRFPA+AMYMIG 
Sbjct: 2   SSHWCYRCSRFVRVSNDEAVVCPDCDSGFVEEIDNPPRAVHVDSR-RRRFPAAAMYMIGA 61

Query: 68  HRSNS---RQNLGSAIRRPRRNGGDRSPFNPVIVLRGPP----DGSEGGESRRFELYYDD 127
           HR  S   R N G  +RR RRNGGDRSPFNPVIVLRG      +G  G E R FELYYDD
Sbjct: 62  HRGGSNSDRNNSGPGLRRTRRNGGDRSPFNPVIVLRGSSSDGANGDGGSEGRGFELYYDD 121

Query: 128 GTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICE 187
           G GSGLRPLPPSMSEFL GSGFDRLLEQLS IE+N IG+ E PPASK+AIESMPTI I +
Sbjct: 122 GAGSGLRPLPPSMSEFLFGSGFDRLLEQLSQIEINGIGRCEQPPASKAAIESMPTIEIDD 181

Query: 188 NHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDS 247
           +H+  E HCAVCKEAFELG EAREMPC HIYHSDCILPWLS+ NSCPVCRHELP+D Q+S
Sbjct: 182 SHVSNEPHCAVCKEAFELGTEAREMPCKHIYHSDCILPWLSLHNSCPVCRHELPADTQNS 241

Query: 248 LDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAF 307
            ++     NG S+ SN DEN GLTIWRLPGGGFAVGRF GGRRGGERELPVVYTE+DG F
Sbjct: 242 SESE----NGQSLLSNEDENVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGF 301

Query: 308 TNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSS 367
            +GGVPRR+S+ SR  RGR+RGG RR  RN   CF    M SS+A +S+SS D+   RS+
Sbjct: 302 NSGGVPRRISWSSRGRRGRDRGGLRRVFRNFLACF--GGMGSSSASSSASSSDTRSRRST 361

Query: 368 SSRPLPQMNAE----------PRQRRTWSMEVNSGTSSW 389
           ++R  P   A           PR RRTWSM+VNSG   W
Sbjct: 362 TTRTTPARRATSLSNLDATTIPRTRRTWSMDVNSGIVRW 393

[Close]
BLAST of CmoCh04G002060 vs. NCBI nr
Match: gi|703099235|ref|XP_010096594.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 490.0 bits (1260), Expect = 3.9e-135
Identity = 259/390 (66.41%), Postives = 293/390 (75.13%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +A SSYWCYRCSRFVR  N ++VVCPDC+ GFVE+I++P         PRRR FPA+AMY
Sbjct: 3   SARSSYWCYRCSRFVRVWNDDAVVCPDCDGGFVEEIENPPQPAVHVGGPRRRRFPAAAMY 62

Query: 65  MIGHR------SNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG---ESRRFE 124
           MIG        S+ R + G  +RR RRNGGDRSPFNPVIVLRG PDG  GG   E R FE
Sbjct: 63  MIGAAQRNAPSSSDRNDSGPILRRTRRNGGDRSPFNPVIVLRGSPDGGGGGGEGEGRGFE 122

Query: 125 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPT 184
           LYYDDG GSGLRPLP SMSEFLLGSGFDRLLEQLS IE+N IG+ E PPASK+AIESMPT
Sbjct: 123 LYYDDGGGSGLRPLPASMSEFLLGSGFDRLLEQLSQIEINGIGRLEQPPASKAAIESMPT 182

Query: 185 IRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPS 244
           I I ++H+ TESHCAVCKE FELG EAREMPC HIYH +CILPWLS+ NSCPVCRHELP+
Sbjct: 183 IEIDDSHISTESHCAVCKEPFELGTEAREMPCKHIYHPECILPWLSLHNSCPVCRHELPA 242

Query: 245 DNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTE 304
           D  +S +      NG  +T N +EN GLTIWRLPGGGFAVGRF GGRRGGERELPVVYTE
Sbjct: 243 DAPNSSEPE----NGQPLTPNEEENVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 302

Query: 305 VDGAFTNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSG 364
           +DG F NGG+PRR+S+ SR  RGRERGG RR  RN+F CF     R+S +  SSSS +S 
Sbjct: 303 MDGGFNNGGLPRRISWSSRGSRGRERGGLRRVFRNLFACFSGN--RASGS-DSSSSSESR 362

Query: 365 PSRSSSSRPLPQMNAEPRQRRTWSMEVNSG 385
           P+R   S         PR+RRTWSMEVNSG
Sbjct: 363 PARRVRSLAHSGATDGPRRRRTWSMEVNSG 385

[Close]
BLAST of CmoCh04G002060 vs. NCBI nr
Match: gi|950954259|ref|XP_014496376.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vigna radiata var. radiata])

HSP 1 Score: 477.6 bits (1228), Expect = 2.0e-131
Identity = 249/394 (63.20%), Postives = 287/394 (72.84%), Query Frame = 1 

Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRR-FPASAMY 64
           +  SSYWCYRCSRFVR   Q++VVCPDC+ GF+E+I+HP   R++   PRRR FPA+AMY
Sbjct: 4   SGTSSYWCYRCSRFVRVFRQDAVVCPDCDGGFIEEIEHPP--RSVHLDPRRRRFPAAAMY 63

Query: 65  MIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGG---ESRRFELYYDDG 124
           MIG R  S       +RR RRNGGDRSPFNPVIVLRG    +      ESR FEL+YDDG
Sbjct: 64  MIGQRPASDNAARPFLRRTRRNGGDRSPFNPVIVLRGSAAATSATSEEESRGFELFYDDG 123

Query: 125 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 184
            GSGLRPLPPSMSEFLLGSGFDRLLEQLS IE+N IG++E PPASK+AI+S+PTI I   
Sbjct: 124 AGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDNT 183

Query: 185 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSD----- 244
           HL  ESHCAVCKEAFELG   REMPC HIYH +CILPWL++ NSCPVCRHELP+D     
Sbjct: 184 HLTMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSNAN 243

Query: 245 -NQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTE 304
            N +S  A  +G+       N +EN GLTIWRLPGGGFAVGRF GGRRG ERELPVVYTE
Sbjct: 244 TNANSNPAQNVGL-------NEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTE 303

Query: 305 VDGAFTNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSG 364
           +DG F NGG PRR+S+ SR  RGRE GG  RF RN+FGCFR     S ++ T  S+    
Sbjct: 304 MDGGFNNGGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGSSTTQRSASSRD 363

Query: 365 PSRSSSSRPLPQMNAEPRQRRTWSMEVNSGTSSW 389
             R+SSSR    M+  PR RRTWSM+VNSG  +W
Sbjct: 364 SMRASSSR--SSMDPSPRSRRTWSMDVNSGMRAW 386

The following BLAST results are available for this feature:
BLAST of CmoCh04G002060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHC2A_ARATH6.4e-8549.01Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2... [more]
RDUF2_ARATH5.4e-7646.77E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RDUF1_ARATH1.6e-7548.11E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RING1_GOSHI2.7e-3533.45E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RNG1L_ARATH2.4e-3129.37E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
BLAST of CmoCh04G002060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLW4_CUCSA5.1e-18283.51Uncharacterized protein OS=Cucumis sativus GN=Csa_5G182680 PE=4 SV=1[more]
W9R2B5_9ROSA2.7e-13566.41E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_025341 PE=4 SV=1[more]
V7CZ69_PHAVU1.4e-13163.20Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G233700g PE=4 SV=1[more]
A0A0S3RZL8_PHAAN5.9e-13063.14Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G363300 PE=... [more]
A0A0L9U8T3_PHAAN5.9e-13063.14Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g257000 PE=4 SV=1[more]
BLAST of CmoCh04G002060 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G39720.13.6e-8649.01 RING-H2 finger C2A[more]
AT5G59550.13.0e-7746.77 zinc finger (C3HC4-type RING finger) family protein[more]
AT3G46620.18.8e-7748.11 zinc finger (C3HC4-type RING finger) family protein[more]
AT3G56580.21.1e-3438.11 RING/U-box superfamily protein[more]
AT3G19950.11.3e-3229.37 RING/U-box superfamily protein[more]
BLAST of CmoCh04G002060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123486|ref|XP_008461689.1|4.6e-18484.28PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449459896|ref|XP_004147682.1|7.3e-18283.51PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|1009120304|ref|XP_015876849.1|3.4e-13966.42PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
gi|703099235|ref|XP_010096594.1|3.9e-13566.41E3 ubiquitin-protein ligase RING1 [Morus notabilis][more]
gi|950954259|ref|XP_014496376.1|2.0e-13163.20PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vigna radiata var. radiata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR010543DUF1117
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0044765 single-organism transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046873 metal ion transmembrane transporter activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G002060.1CmoCh04G002060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 187..229
score: 3.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 188..228
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 188..229
score: 12
IPR010543Domain of unknown function DUF1117PFAMPF06547DUF1117coord: 261..357
score: 4.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 184..232
score: 2.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 1..329
score: 2.6E
NoneNo IPR availablePANTHERPTHR22763:SF42SUBFAMILY NOT NAMEDcoord: 1..329
score: 2.6E
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 8..40
score: 5.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 168..234
score: 3.53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G002060Cucsa.165190Cucumber (Gy14) v1cgycmoB0474
CmoCh04G002060CmaCh04G002050Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G002060CmaCh04G011750Cucurbita maxima (Rimu)cmacmoB731
CmoCh04G002060Cla003999Watermelon (97103) v1cmowmB673
CmoCh04G002060Csa5G182680Cucumber (Chinese Long) v2cmocuB737
CmoCh04G002060MELO3C023875Melon (DHL92) v3.5.1cmomeB646
CmoCh04G002060ClCG07G003490Watermelon (Charleston Gray)cmowcgB676
CmoCh04G002060CSPI05G09780Wild cucumber (PI 183967)cmocpiB747
CmoCh04G002060Lsi03G021210Bottle gourd (USVL1VR-Ls)cmolsiB655
CmoCh04G002060Lsi10G013920Bottle gourd (USVL1VR-Ls)cmolsiB619
CmoCh04G002060Lsi04G008950Bottle gourd (USVL1VR-Ls)cmolsiB670
CmoCh04G002060Cp4.1LG01g10790Cucurbita pepo (Zucchini)cmocpeB674
CmoCh04G002060Cp4.1LG05g09400Cucurbita pepo (Zucchini)cmocpeB705
CmoCh04G002060Cp4.1LG01g05030Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G002060MELO3C009244.2Melon (DHL92) v3.6.1cmomedB770
CmoCh04G002060MELO3C023875.2Melon (DHL92) v3.6.1cmomedB733
CmoCh04G002060CsaV3_3G034750Cucumber (Chinese Long) v3cmocucB0817
CmoCh04G002060CsaV3_5G008220Cucumber (Chinese Long) v3cmocucB0873
CmoCh04G002060Cla97C07G131770Watermelon (97103) v2cmowmbB755
CmoCh04G002060Cla97C02G045990Watermelon (97103) v2cmowmbB716
CmoCh04G002060Cla97C10G204500Watermelon (97103) v2cmowmbB693
CmoCh04G002060Bhi06G000860Wax gourdcmowgoB0837
CmoCh04G002060Bhi10G000586Wax gourdcmowgoB0876
CmoCh04G002060Bhi11G001887Wax gourdcmowgoB0821
CmoCh04G002060CsGy3G029990Cucumber (Gy14) v2cgybcmoB389
CmoCh04G002060CsGy5G007140Cucumber (Gy14) v2cgybcmoB652
CmoCh04G002060Carg18330Silver-seed gourdcarcmoB0123
CmoCh04G002060Carg00257Silver-seed gourdcarcmoB0924
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G002060CmoCh20G004220Cucurbita moschata (Rifu)cmocmoB421
CmoCh04G002060CmoCh04G012460Cucurbita moschata (Rifu)cmocmoB464
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G002060Cucurbita pepo (Zucchini)cmocpeB653
CmoCh04G002060Bottle gourd (USVL1VR-Ls)cmolsiB630
CmoCh04G002060Cucumber (Gy14) v2cgybcmoB522
CmoCh04G002060Melon (DHL92) v3.6.1cmomedB798
CmoCh04G002060Silver-seed gourdcarcmoB1247
CmoCh04G002060Cucumber (Chinese Long) v3cmocucB0837
CmoCh04G002060Watermelon (97103) v2cmowmbB722
CmoCh04G002060Cucurbita moschata (Rifu)cmocmoB448
CmoCh04G002060Cucurbita moschata (Rifu)cmocmoB478