CsaV3_5G004900 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCAAACAAAAAAAAAAAAGAGTAAAAGAGAAAAACGGAAAGAGCGACTCACCCCTTTGGAAGCTTCTCCGTAATCACAAATCATTCATATACCGAATGCCCCACACTCTAAACTACCCTTTTACCCTTCCTCCCCAAATAAACCTTCCCCTCCTTTCCTCTCCCTTTCCTCGAATCTCCTCTGAATCCCCCATTTTCATATCCTTTATAACCTCTCCTTCCTCACTCCCATTTTTCCACTCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCCAATTTCATAACCCATCAACCGATTCCATGGATGACGCTTCCACTCTCGATCTCATCAGACAACATCTCCTCAACGATTTCAACTCCATCGAAGCTTTCGCTTCAAATCTCAACTTCGACCACAACAGTGGAGTCAACTCTCAAATCTCCTCCCCCACCCCTTCAAAGGTTGCTCCACGCCGCCCTTCGTTAAACGTAGCGATTCCACCTAAGAGTATCTCTGTAGGATCCGCGGTTGAAACCTCGATTGAGGCTAAATCGGATGTGGGTGTGAGTCGGCATTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAATTCGCGGCGGAGATTCGTGATCCCGCTAAGCGTGGGGCTCGGGTTTGGCTTGGAACTTATGATACTGCTATTGAAGCTGCGAAAGCTTATGACAGAGCTGCTTTTAGGATGAGGGGAAGTAAAGCGATTTTGAATTTCCCTCTTGAGGCTGGGAAGGATGTGGAGGATCCGCAGTCGACATCGGATGTTGGGCGGAAAAGGAGGAGGGAAAGTGAGAGTGAGGTTGTGGAAATGGGAAAGAAGGAGATGAAGAAAGAGGAGAGATCGGAAACAGAGGAGATCGGAGTTCCGACTACCGTTTGTCCATTAACGCCGTCTTGTTGGGCGTCGGTTTGGGACAGTGATGGGAAAGGAATTTTTAACGTGCCGCCGTTATCTCCTTACCCGTTAATGGGACATCCTCAATGCACAGTCATATAAATATATAAATAAAAATTGTGAAAAAAGAAATTTCATGAATTTGTTTTTCTTTTTTCTAAAAAAAAAAAAAAAGAAAAATTAAAATCCTTCAACTTTGTGAGGGTGAAGATGAAGCTTATCCAAGTTGATGAGAATTTAAAAAAGAAAAAAAAGAGATATATTTTGAGGTTTGGAAATTAGTATATGATTTGTTTGTTCATTTATTGATATGTAAAATTTTGAACCATCAAACATCATGAAGATGTGTTGATAGGTTAAATGGCTAAATATGAATTTCATTTGGTATGTGACTTTGTTTAAATTTTATGCCATGCTTCTTCTTGTTGCTTTAATTTCATCTTCTACAAATGTAAATAAGTTGTTTAATATATATAATAATGTTATGTTAAATTCAATGTGTGAGTATCACTTTTAATCACGTCGAACGCAATTAGCAAATCAATGTAGAGGTGCAATAAAATATATACACAATCTATCGCTGCGATATGTAGGACATGTTTGAATTGTTTTTTGAAGTATTTCAAAACACTTTTTAATTTAAAAGTACTTTTCAAAAAAAGTCAATCCAATCGAACTCGTACCAACCTCATTCATTTTATTAGTTAGAGCATGTTAGGTCATGTAATCCATCTCCTTTACTTTTAACTTAGGACATGATTGATTGTATGTTATATACTGTTCATTGATATAGATACTCATGATATAGTGTTGGCCGAACTGTCATAGTAAGATGCAAAAGGTCTCGATTGATTGTATGTTATTGTTCCTTGATATGGTAGTCGGCTTTCTAATCAAAGTCTATTACCATGAAAAAAATTTAAATTTTAGTCCCTCGAGTTTTCGAGAACGGTTGAGATTTTAAAATATGCAAATTTAATTCTTGCATTTATAACAATCAAAACATGTATATACAAACACATACGTACTTTTGCATTCTATGTAGTTTACTTGCAACTCTTCCCCCTCCTTTCAAAATATTCGTAAAGGTACTTTCTTGGTTTTTGTTCATCTTTTTCCAATAAAAACGAGACTGTTGTGAAATCGAAAAATAAAACGAGTCACAACCGAAATATGAATATGAAGAAAATATAATATCATAGTAATATAAATAATAAATAACAAAACGACTAAAATGATATTTAAAATTTCACATTGTCTCATCCTTAGAATAGAGACTCAATTTTATAATTTCCAAGAACCCATTATAATTTTATTTTCGCTAAAAGAAAAATACGTCAA ATGGATGACGCTTCCACTCTCGATCTCATCAGACAACATCTCCTCAACGATTTCAACTCCATCGAAGCTTTCGCTTCAAATCTCAACTTCGACCACAACAGTGGAGTCAACTCTCAAATCTCCTCCCCCACCCCTTCAAAGGTTGCTCCACGCCGCCCTTCGTTAAACGTAGCGATTCCACCTAAGAGTATCTCTGTAGGATCCGCGGTTGAAACCTCGATTGAGGCTAAATCGGATGTGGGTGTGAGTCGGCATTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAATTCGCGGCGGAGATTCGTGATCCCGCTAAGCGTGGGGCTCGGGTTTGGCTTGGAACTTATGATACTGCTATTGAAGCTGCGAAAGCTTATGACAGAGCTGCTTTTAGGATGAGGGGAAGTAAAGCGATTTTGAATTTCCCTCTTGAGGCTGGGAAGGATGTGGAGGATCCGCAGTCGACATCGGATGTTGGGCGGAAAAGGAGGAGGGAAAGTGAGAGTGAGGTTGTGGAAATGGGAAAGAAGGAGATGAAGAAAGAGGAGAGATCGGAAACAGAGGAGATCGGAGTTCCGACTACCGTTTGTCCATTAACGCCGTCTTGTTGGGCGTCGGTTTGGGACAGTGATGGGAAAGGAATTTTTAACGTGCCGCCGTTATCTCCTTACCCGTTAATGGGACATCCTCAATGCACAGTCATATAA ATGGATGACGCTTCCACTCTCGATCTCATCAGACAACATCTCCTCAACGATTTCAACTCCATCGAAGCTTTCGCTTCAAATCTCAACTTCGACCACAACAGTGGAGTCAACTCTCAAATCTCCTCCCCCACCCCTTCAAAGGTTGCTCCACGCCGCCCTTCGTTAAACGTAGCGATTCCACCTAAGAGTATCTCTGTAGGATCCGCGGTTGAAACCTCGATTGAGGCTAAATCGGATGTGGGTGTGAGTCGGCATTACAGAGGAGTTCGCCGGCGGCCGTGGGGGAAATTCGCGGCGGAGATTCGTGATCCCGCTAAGCGTGGGGCTCGGGTTTGGCTTGGAACTTATGATACTGCTATTGAAGCTGCGAAAGCTTATGACAGAGCTGCTTTTAGGATGAGGGGAAGTAAAGCGATTTTGAATTTCCCTCTTGAGGCTGGGAAGGATGTGGAGGATCCGCAGTCGACATCGGATGTTGGGCGGAAAAGGAGGAGGGAAAGTGAGAGTGAGGTTGTGGAAATGGGAAAGAAGGAGATGAAGAAAGAGGAGAGATCGGAAACAGAGGAGATCGGAGTTCCGACTACCGTTTGTCCATTAACGCCGTCTTGTTGGGCGTCGGTTTGGGACAGTGATGGGAAAGGAATTTTTAACGTGCCGCCGTTATCTCCTTACCCGTTAATGGGACATCCTCAATGCACAGTCATATAA MDDASTLDLIRQHLLNDFNSIEAFASNLNFDHNSGVNSQISSPTPSKVAPRRPSLNVAIPPKSISVGSAVETSIEAKSDVGVSRHYRGVRRRPWGKFAAEIRDPAKRGARVWLGTYDTAIEAAKAYDRAAFRMRGSKAILNFPLEAGKDVEDPQSTSDVGRKRRRESESEVVEMGKKEMKKEERSETEEIGVPTTVCPLTPSCWASVWDSDGKGIFNVPPLSPYPLMGHPQCTVI
BLAST of CsaV3_5G004900 vs. NCBI nr
Match: XP_004143677.2 (PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis sativus] >KGN50320.1 hypothetical protein Csa_5G167120 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 9.4e-128 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. NCBI nr
Match: XP_008436974.1 (PREDICTED: ethylene-responsive transcription factor ERF105 [Cucumis melo]) HSP 1 Score: 437.6 bits (1124), Expect = 2.7e-119 Identity = 223/236 (94.49%), Postives = 228/236 (96.61%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. NCBI nr
Match: XP_022957640.1 (ethylene-responsive transcription factor ERF105-like [Cucurbita moschata]) HSP 1 Score: 349.0 bits (894), Expect = 1.3e-92 Identity = 182/239 (76.15%), Postives = 202/239 (84.52%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. NCBI nr
Match: XP_022996031.1 (ethylene-responsive transcription factor ERF105-like [Cucurbita maxima] >XP_022996032.1 ethylene-responsive transcription factor ERF105-like [Cucurbita maxima]) HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89 Identity = 179/240 (74.58%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. NCBI nr
Match: XP_023532498.1 (ethylene-responsive transcription factor ERF105-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88 Identity = 178/240 (74.17%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TAIR10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47 Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TAIR10
Match: AT5G47230.1 (ethylene responsive element binding factor 5) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36 Identity = 93/191 (48.69%), Postives = 119/191 (62.30%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TAIR10
Match: AT5G61600.1 (ethylene response factor 104) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36 Identity = 97/228 (42.54%), Postives = 126/228 (55.26%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TAIR10
Match: AT4G17490.1 (ethylene responsive element binding factor 6) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32 Identity = 91/220 (41.36%), Postives = 124/220 (56.36%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TAIR10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 122.1 bits (305), Expect = 4.6e-28 Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. Swiss-Prot
Match: sp|Q40478|ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.6e-46 Identity = 113/226 (50.00%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. Swiss-Prot
Match: sp|Q8VY90|EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.8e-46 Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. Swiss-Prot
Match: sp|Q9LW48|ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.3e-40 Identity = 102/189 (53.97%), Postives = 126/189 (66.67%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. Swiss-Prot
Match: sp|O80341|EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35 Identity = 93/191 (48.69%), Postives = 119/191 (62.30%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. Swiss-Prot
Match: sp|Q9FKG1|EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 GN=ERF104 PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35 Identity = 97/228 (42.54%), Postives = 126/228 (55.26%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TrEMBL
Match: tr|A0A0A0KKV1|A0A0A0KKV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167120 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 6.2e-128 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TrEMBL
Match: tr|A0A1S3ATH2|A0A1S3ATH2_CUCME (ethylene-responsive transcription factor ERF105 OS=Cucumis melo OX=3656 GN=LOC103482544 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 1.8e-119 Identity = 223/236 (94.49%), Postives = 228/236 (96.61%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TrEMBL
Match: tr|A0A2R6PLT3|A0A2R6PLT3_ACTCH (Ethylene-responsive transcription factor 5 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc27910 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52 Identity = 135/274 (49.27%), Postives = 167/274 (60.95%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TrEMBL
Match: tr|A0A2I4FVZ8|A0A2I4FVZ8_9ROSI (ethylene-responsive transcription factor ERF105-like OS=Juglans regia OX=51240 GN=LOC109002492 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.7e-51 Identity = 140/298 (46.98%), Postives = 172/298 (57.72%), Query Frame = 0
BLAST of CsaV3_5G004900 vs. TrEMBL
Match: tr|A0A2P5BQN2|A0A2P5BQN2_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF34 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.9e-50 Identity = 140/296 (47.30%), Postives = 161/296 (54.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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