CsaV3_5G004690 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G004690
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	sec-independent protein translocase protein TatB
Location	chr5 : 3055536 .. 3060486 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATTATGCCGTTCTTCCACAGCTCACACCATACTCGCCACCGGCGCCTGTCGTCGCCCACCGCCGTCCATTGCACAACCATCAACGTGCCGCTTTACACGACCTGATTCTAAAGGGAGAAACCCTAGTCCCCATAGTTTTTTTTTTTTTTTTTTTTTTTTTATGTTTTCTTTTCACTTGTGCCGCCTACACCCTTGCATTTGTATTGGTTTGTCGCAGCCGATCGCCACTGTCCGCTGATTTACACCTCACAAGGCTAAGGTTCAAGTTTCTGTAGGGTGTTTGTTCAGTGAGGCGAAAAGGAAAAAAGAATAAAGGTTTTGCTCTGTACCCAATTTTGGAATTTTATTCTTGTTTTGATTTTTTTAACGAGGTGGGTAATGAAAGGAATGCTATTAGAATAGAACTAGTGTATCAGGGTATGTTGTTAATTATGTAAGGAGATAATTTTTTTGTTTTTTGGAGAGTTTTGCTATAAATAGAGTGGGCTAGAAGGATATGGAGTGAGGCATTTGGTGAGTGAGTTCGTGATTTAGTGAATCAATTAGGGCTTGAGGAGTATCTCAAAAGGAGTTCAGCTCCCCTAATAATTTGTTTTTATCTTCTACATTTCAATACATTCTGGTTCTGTTTTGGATTCTGTCAGAGGTATCAAATGTATCTTGTACTTGTACAAGTCTCCCATTAACGAAATGTTATACATTTCGTAGGAAAAGAAAGGACTGATAGTGTTTTTGCTTGTCTGTTGTGAAATTTCCTATTTTGTTTCTGAAGATTGGTCTTCAATTGGATTGGAACCACTCCAAAAAGTTTAGATAATTCCATTTGGGATCATTCTCTCGAAAAAGTGAGGATTGAAGTGAAAGTTATTGCATTTGAGATCCTTCTCAAACAGGCCTGGCTTGATTGCTATTCAGAGTTCTGAGAAACTACGAAACTCAAATGCTAGGCATTTCATATGGAGAAGTCCTCCTCCTTATTGGTGCTACTGCTGCCTTAATTGGTAATTACTGCACCACCTTTTTCATTTCCTATACCATCTAATATATTTAAGCCGTGGATAGAGTTTTGACTCCCAAATTATTATGAGAAGGGCCAAAGGATCTCCCATTGATATCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTATGATGGAACAAACCAATGCTCGCAAGGTATTTCTTATTTAGTTTAAATAACCATTAGGAAAATTTATGGTCATTTTTGTGAAGGTTCCAGCAGCATTAGTATTGTCTTCTGGAAAGATGTTGGATAGTACATGGTAAAGATATGTTTTTAGTGAATGGACCACATTTTAGGCCATGATTGGAAGTGACTAAGATCACTTTTGTTGTGTTCAAAATCACTTCTAAACATGTCTTTAATCATCAAAACATATTTCAATTGCATGAAAACTTGCCGTCAGTTATGGTCAAATTAGAAACTTGTTTGAACTGATCAAAGTACTCTTTGGAATTGATTTGTTGGTTTTGGAGCTAGGCTGAGCAGAAAAGTAAATTGCTAGAGTTCAATGCATATTGCACATTTTTTAAATGTTCTTTCTGATTAAATTAAATCTTCTATTTGATGCTCCTGTTTCTTCGTACTTTTTTTTAGAATTCTCTCTACGCTCATTATGCATGTCAATAGCAAGGGTGTTTAACTTTTACTCATAATAGGACATAGAACTGCCAGATTTTGAGAATAGGTTTACATTAATGTGGCATTTAGTGCTTGTGGACACTATTGTTACATCAAGACTGCAACAGATTAGATTGAACCATGTGTAACAACATAATTGGATGATTATAAAAGTTATGGAATTTAATTTACATTGAAGTTCTTTGATATAATTCTCTGTTTGCAGGTTCACAAGGAATTGCAAGACACGTTGGCTCAACTTGATGCTATTCGCCATGAAATTCGAAGCATTTCAATCTTGAATCCTGGGCCATTGACTCAAAGGCTTGTTGACAACCCTGAGCTCAAAGCAGCTGATAGTGGTGTAACTAGTAGGTGATATGTATCCCTACTGCTAATCTTCACTAGGGCTTCTAGTTTTCGTAATTGGTTTTTCCTCTTGCATTTCAAATGGTAGGTAATTCAGCCGAAGAAAAACCTACTGTGGAGACTACACCAGTTGCTGAGAAAACTGCACCAGCAGCTAGCATCCTCAAGGTTCCTATTAATTGCTGAATCTCATCATGGACCTTTCCTTTTTTGCCACTACAAGTTTAAGCGACTTCAATGGATCTGCACTTTTCTTCAGGTTGCAACTTCACAAATATCAAATGAGCACAGCCGAGCAACTACGTTTGCCAGGTTGGCTGAATCACCGAACATAAAGAATGGATCCTCTGCCTCGTTGCCAATTACTACAGATGTAGAGAAGCTGAATGACGAGTTTGGACTTCCCGTCTTACCTGTGTCGGCTGAAAATACTGGGTTGTTACCTAAGCGCCCGGGTACAGTATCTGTTATTCAGTTAAAAGATTTGATAATGATTGTCTTATTTTATAAATTTCTCCATTAGTAGCGTTAAAATCTTCATTAGGGAGGTTAGTGCACTTTGAAGCAAAATATCAATTGATGTGATTAGATAAGCTATGGACTGGTGGGACACCAATTATACTTGATAACCACAACTAGTGATGAGATGCATTCATTGTTCGGTTGGGGATATTTTCTATAATGTAGAATTGCTCTCATTTCTTACACACCAATGTTGAGTGGAGGCCAGGGTGTAAACATTTCATTCAGTTATTTTCCTAAACTTAATTCACTCTTGTTATGTTGGGGAAACTTTTGTTTTAAGGAATCAAATATTAAGAATGACAACCACTTTGCTGTTAGATTTGTGTTCCATGTATTGAAGCTATTCAGTTTTTTCACAGAGGAGTTTAAAGGGTCTGACATAATGTTAGAAGCAGTATTGGAAGCAGAGGTTGCTCACAATGCAAAAGAATTTTTCTCATCTCATCAAAGTCAAATGAAACAGGAACAAGAATGAAAATTTCATGAACATCATTTTGGTGAATCATAGTATTGATGATTGGCCTATAAATGAAGTTCAGAAGGTTCAAAAAGCGTACCCCACCTCAGGTATTCCCCCAACTTCATATTTTTCATTTATGTAAGAAAATGAGTTACATAGAAAGTTACACTTTACCCCTTCATATGTATATTTAACTTACTTTTGCCAGTCAGAAAGAAATAGGGGAAAAGAAACACATATTCTGCTCATAAGTATTTCTTGCCTACGAGATAGAGGGTGATTGGAGCATTGAATTGATTATTATAGTTAATAGATTATAATAGTTACATCCGCTTCCCGACAATCCATACTGTCACGAAAGTGAACATGATGGACGGATAGTGAATGTCATCTCTTCTGATATCATTGACTAGCTGTAACCAACATACTTAACAAGCCTGCTAAAACACCATTTACAAGCTACATCTTAGATACCAAATGAGTGACGAACTTTTATACATAAACATAAGCCTTACAGAGACTAGTTACACAATATTTGTTTATTACATTTCAACAACCAGCATATGCAACACAATAGAAACAAAAGTACACCTAGACTCAACCCCCACTACTGGACTCAAAAGTAAGCAAATGTACAAACACGTATTAAGTGTGACCAGAAGCAACGTTACAGGAACTCTCAGGTTAACTGGGGAGGGAGGAAAACAAAATAATTTTGAAAGATGAGCTAAACGAACTCAAGGAGTGACAATTTAATAAAACATATATTTTTCCTTTTGCAATACATTCGGAAACATGTTTGTTATCAAAGCAAACACAACCCAAAAGAACACAGGATTGTTGGTGCTGGTTATCAAAGCATGCACTTAAAATTTCCAAAATTAACAAACACTATAACAAAGAGGGAAAAAGAAGATAGGTAGGAAATAGTAAACATTGTAACAAGGAGATATTTGAATACACTATAACAAATAGGGTGATTTGCTTAGGTTTTTATTGTTGGAAACATCAACTATTATGATTGGAACCACAACCCACATCACCCACTTGAAGTAATTGGGGGTCCAAACGCCATCTAATTGTTTTCACGGCTCTTTGTCACTTATGTACAGAAGTTGTGGTGTATCACTGCTCTTAATCACCTTGGAGAACCACACCCCCAAAAGTCAACTACTGGGGTGGGAGAACCAAGCCACCTACATACTAAATTGGACATCCCATTCTAACTAATGTGGAACAAAGGCAGCCTATACTATCTTGGTTCCTAACACAAATGCTACTTGAGGCTTATGTTTTAAACAGTGCTTTTCCTTATTTTCATGGGAGGATAAGAATCCTCGTTTTTTTCTCAATAGCCATGATTTTAAGCTGCAATAACATCAGCAGGGTAGATTTGAAACATTAATTGCCTTTTTTACTTACCTGTTGTGGTAGAAATTGATATTCTTTTGCAGTTTATGAATTTTTATACTCTAGTTTGTGTTCAAAATGAAAGAAATACAATTAGTCTGATTGTACACAACTTTGTGACTAAATTTTATGTTTGTTTTTATTTTTCTTTTTCATTGTGCAGCTCTTGGTTTGATCATTCTGAAAGGGATTTAACGCATTCACATTAAACTAAGAAAGGCTTTGGAAACTAAATAAGTTCGAGTTGATATTTTTCAGCTTTTAATGTTATATGTAATAGGCAGTTCTTCAAGGATTAGTTATAAGTGAACTATGCTTGTTTTAATCTCTGAATGTGTAATTCCACCAATTATATTAGAGGTTTTCTTGGTTTTTTGAAAATCGAGATACCAAATTATCGCCAAAAGACTAAAAAGTAAAATTATCACAGTTTTGGGACGTTTTCAAATATAACTAAATGAATCAAAATATTTGCAATATATACCAATAATTTTAGTAAAGATA

mRNA sequence

ATGCTAGGCATTTCATATGGAGAAGTCCTCCTCCTTATTGGTGCTACTGCTGCCTTAATTGGGCCAAAGGATCTCCCATTGATATCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTATGATGGAACAAACCAATGCTCGCAAGGTTCACAAGGAATTGCAAGACACGTTGGCTCAACTTGATGCTATTCGCCATGAAATTCGAAGCATTTCAATCTTGAATCCTGGGCCATTGACTCAAAGGCTTGTTGACAACCCTGAGCTCAAAGCAGCTGATAGTGGTGTAACTAGTAATTCAGCCGAAGAAAAACCTACTGTGGAGACTACACCAGTTGCTGAGAAAACTGCACCAGCAGCTAGCATCCTCAAGGTTGCAACTTCACAAATATCAAATGAGCACAGCCGAGCAACTACGTTTGCCAGGTTGGCTGAATCACCGAACATAAAGAATGGATCCTCTGCCTCGTTGCCAATTACTACAGATGTAGAGAAGCTGAATGACGAGTTTGGACTTCCCGTCTTACCTGTGTCGGCTGAAAATACTGGGTTGTTACCTAAGCGCCCGGAGGAGTTTAAAGGGTCTGACATAATGTTAGAAGCAGTATTGGAAGCAGAGGTTGCTCACAATGCAAAAGAATTTTTCTCATCTCATCAAAGTCAAATGAAACAGGAACAAGAATGA

Coding sequence (CDS)

ATGCTAGGCATTTCATATGGAGAAGTCCTCCTCCTTATTGGTGCTACTGCTGCCTTAATTGGGCCAAAGGATCTCCCATTGATATCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTATGATGGAACAAACCAATGCTCGCAAGGTTCACAAGGAATTGCAAGACACGTTGGCTCAACTTGATGCTATTCGCCATGAAATTCGAAGCATTTCAATCTTGAATCCTGGGCCATTGACTCAAAGGCTTGTTGACAACCCTGAGCTCAAAGCAGCTGATAGTGGTGTAACTAGTAATTCAGCCGAAGAAAAACCTACTGTGGAGACTACACCAGTTGCTGAGAAAACTGCACCAGCAGCTAGCATCCTCAAGGTTGCAACTTCACAAATATCAAATGAGCACAGCCGAGCAACTACGTTTGCCAGGTTGGCTGAATCACCGAACATAAAGAATGGATCCTCTGCCTCGTTGCCAATTACTACAGATGTAGAGAAGCTGAATGACGAGTTTGGACTTCCCGTCTTACCTGTGTCGGCTGAAAATACTGGGTTGTTACCTAAGCGCCCGGAGGAGTTTAAAGGGTCTGACATAATGTTAGAAGCAGTATTGGAAGCAGAGGTTGCTCACAATGCAAAAGAATTTTTCTCATCTCATCAAAGTCAAATGAAACAGGAACAAGAATGA

Protein sequence

MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNARKVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVETTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLNDEFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE

Homology

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BLAST of CsaV3_5G004690 vs. NCBI nr
Match: XP_004152379.1 (PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654829.1 PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654830.1 PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus] >KGN50299.1 hypothetical protein Csa_5G166430 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 4.6e-122
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
           TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE
Sbjct: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 239

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BLAST of CsaV3_5G004690 vs. NCBI nr
Match: XP_008436983.1 (PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436984.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436985.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_008436986.1 PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >ADN34293.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 429.9 bits (1104), Expect = 5.8e-117
Identity = 231/239 (96.65%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDS+MEQT+AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAA SGVTSNSAEEKPTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
           TTPVAEKTA  ASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSS QSQMKQEQE
Sbjct: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

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BLAST of CsaV3_5G004690 vs. NCBI nr
Match: XP_022922242.1 (uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 uncharacterized protein LOC111430283 [Cucurbita moschata])

HSP 1 Score: 372.9 bits (956), Expect = 8.4e-100
Identity = 200/240 (83.33%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGAT A IGPKDLP I+RMAGR AG+AIGYVQLARGQFDS+M+QT AR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDT+AQLDAIRHEIRSIS LNPG LTQRLVDNPELKAADSGVTS+SA+EKP+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
            TP AE T PAA+ILKVATSQIS EHSRATTFA+LAESP I+NGSSAS P+ TDVEK ND
Sbjct: 121 ITPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPVATDVEKPND 180

Query: 181 EFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           E G+P VLPVSAEN G+LPKRPEE KGSDIMLEAVLEAEVA++AKEFFS HQ QMKQEQE
Sbjct: 181 ELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVLEAEVANSAKEFFSHHQIQMKQEQE 240

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BLAST of CsaV3_5G004690 vs. NCBI nr
Match: XP_023551431.1 (uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433.1 uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99
Identity = 199/240 (82.92%), Postives = 216/240 (90.00%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGAT A IGPKDLP I+RMAGR AG+AIGYVQLARGQFDS+M+QT AR
Sbjct: 1   MLGISYGELLLLIGATVAFIGPKDLPRIARMAGRRAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDT+AQLDAIRHEIRSIS LNPG LTQRLVDNPELKAADSGVTS+SA+EKP+VE
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSAKEKPSVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
            TP AE T PAA+ILKVATSQIS EHSRATTFA+LAESP I+NGSSAS P  TDVE  ND
Sbjct: 121 ITPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPAATDVEMPND 180

Query: 181 EFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           E G+P VLPVSAEN G+LPKRPEE KGSDIMLEAV+EAEVAH+AKEFFS HQ QMKQEQE
Sbjct: 181 ELGVPSVLPVSAENAGMLPKRPEELKGSDIMLEAVMEAEVAHSAKEFFSHHQIQMKQEQE 240

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BLAST of CsaV3_5G004690 vs. NCBI nr
Match: XP_022972971.1 (uncharacterized protein LOC111471495 [Cucurbita maxima] >XP_022972972.1 uncharacterized protein LOC111471495 [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 197/240 (82.08%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGATAA IGPKDLP I+RMAGRMAG+AIGYVQLARGQFDS+M+QT AR
Sbjct: 1   MLGISYGELLLLIGATAAFIGPKDLPRIARMAGRMAGKAIGYVQLARGQFDSVMQQTQAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDT+AQ+DAIRHEIRSIS LNPG LTQRLVDNPELKAADSGVTS+SA EKP+V 
Sbjct: 61  QVHKELQDTMAQIDAIRHEIRSISFLNPGTLTQRLVDNPELKAADSGVTSDSATEKPSV- 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
             P AE T PAA+ILKVATSQIS EHSRATTFA+LAESP I+NGSSAS P+ TDVEK ND
Sbjct: 121 -PPTAEGTTPAANILKVATSQISIEHSRATTFAKLAESPTIRNGSSASFPVATDVEKPND 180

Query: 181 EFGLP-VLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           E G+P VLPVSAEN G+LPKRP E KGSDIMLEAVLEAEVA++AKEFFS HQ Q KQEQE
Sbjct: 181 ELGVPSVLPVSAENAGMLPKRPVELKGSDIMLEAVLEAEVANSAKEFFSHHQIQTKQEQE 238

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BLAST of CsaV3_5G004690 vs. TAIR10
Match: AT5G43680.1 (unknown protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 114/238 (47.90%), Postives = 150/238 (63.03%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLG+SYGE+LL++GATAAL+GPKDLP+I+R  GR+ GRAIGY+ +ARG  D +M+Q   +
Sbjct: 1   MLGLSYGELLLIVGATAALVGPKDLPIIARAGGRLFGRAIGYINMARGHLDGVMKQPQMQ 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDN-----PELKAADSGVTSNSAEE 120
           ++ KE+QD  AQ+DAI H  R  S+ +  PLT+R VDN     P     +  VTS + EE
Sbjct: 61  EISKEVQDLRAQVDAISHGAR-FSLFDSSPLTRR-VDNQKTQEPSPSTTNGIVTSVNVEE 120

Query: 121 KPTVETTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDV 180
           K      PV   T   A     ++S   N H++AT+FARL+E+ N K  S          
Sbjct: 121 K----QKPVDHYT--KAQEFSGSSSASVNLHAQATSFARLSETVNGKTHS---------- 180

Query: 181 EKLNDEFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQ 234
             LN +   PVLPVSAE   LLP+R E  +GSD+MLEAVLEAEVAH AK FF+  + +
Sbjct: 181 --LNSD--SPVLPVSAEMAKLLPQRKESARGSDLMLEAVLEAEVAHKAKSFFAQAEKE 216

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BLAST of CsaV3_5G004690 vs. Swiss-Prot
Match: sp|A4G9I1|TATB_HERAR (Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans OX=204773 GN=tatB PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 1  MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
          M+ I++ ++ ++  A    IGP+ LP ++RMAG + GRA  Y+   + +    ME    R
Sbjct: 1  MIDIAFSKLAIIGVAALVFIGPEKLPTVARMAGTLFGRAQRYINDVKSEVSREMELDELR 60

Query: 61 KVHKELQDTLAQLD 75
          K+HK++QD    ++
Sbjct: 61 KMHKDVQDAATDVE 74

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BLAST of CsaV3_5G004690 vs. Swiss-Prot
Match: sp|Q0C0V9|TATB_HYPNA (Sec-independent protein translocase protein TatB OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=tatB PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.9e-04
Identity = 23/66 (34.85%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 3  GISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNARKV 62
          GI + E+LL+  A   +IGPKDLP++ R  G++ G+     +  +  FD +  Q+   ++
Sbjct: 4  GIGFSELLLIGLAALIIIGPKDLPMMMRTLGQLMGKGRRMAREFQAAFDDIARQSELDEL 63

Query: 63 HKELQD 69
           KE+QD
Sbjct: 64 KKEIQD 69

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BLAST of CsaV3_5G004690 vs. TrEMBL
Match: tr|A0A0A0KN15|A0A0A0KN15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 3.0e-122
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
           TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE
Sbjct: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 239

[Close]

BLAST of CsaV3_5G004690 vs. TrEMBL
Match: tr|A0A1S3ATI2|A0A1S3ATI2_CUCME (sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC103482550 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.8e-117
Identity = 231/239 (96.65%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDS+MEQT+AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAA SGVTSNSAEEKPTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
           TTPVAEKTA  ASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSS QSQMKQEQE
Sbjct: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of CsaV3_5G004690 vs. TrEMBL
Match: tr|E5GCU4|E5GCU4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.8e-117
Identity = 231/239 (96.65%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLGISYGE+LLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDS+MEQT+AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAA SGVTSNSAEEKPTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180
           TTPVAEKTA  ASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQMKQEQE 240
           EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSS QSQMKQEQE
Sbjct: 181 EFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSQQSQMKQEQE 239

[Close]

BLAST of CsaV3_5G004690 vs. TrEMBL
Match: tr|I1L890|I1L890_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791066 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 144/237 (60.76%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLG SYGE+ LL+GATAALIGPKDLP+I R AGR+AGRAIGYVQLARGQFD++M+Q+ AR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120
           +VHKELQDT+AQLDAIRHEIRSISI+NPGPLT+RLVD+P+        TS S E +   E
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPD-------QTSISNESRKPEE 120

Query: 121 TTPVAEKTAPAASILKVATSQISNE---HSRATTFARLAESPNIKNGSSASLPITTDVEK 180
           +    ++ +   +++K +TS  SN     ++AT ++RL  SP IKN  SAS   +T+VEK
Sbjct: 121 S---GQENSSIPTVMKDSTSMSSNSCHMQNQATIYSRLVNSPAIKNELSAS---STEVEK 180

Query: 181 LNDEFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQM 235
           + D+  L VLP+SAEN GLLP R  + KGSDI+LEA++EAEVAHNAKEFFS  Q+Q+
Sbjct: 181 IEDKLQLTVLPISAENAGLLPIRGADVKGSDIVLEAIVEAEVAHNAKEFFSQPQNQI 224

[Close]

BLAST of CsaV3_5G004690 vs. TrEMBL
Match: tr|A0A1S3E741|A0A1S3E741_CICAR (uncharacterized protein LOC101495456 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101495456 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.4e-64
Identity = 145/241 (60.17%), Postives = 178/241 (73.86%), Query Frame = 0


Query: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60
           MLG SYGE+ LL+GATAALIGPKDLP+ISR AGR+AGRAIGYVQLARGQ +++M+Q+ AR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIISRTAGRLAGRAIGYVQLARGQLETVMQQSQAR 60

Query: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRL-------VDNPELKAADSGVTSNSA 120
           +VHKELQDT+AQLDAIRHEIRSISI+NPGPLT+RL       + +  +K  D GV  N+ 
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLDNLDQTFISDDNMKPKDDGV--NNL 120

Query: 121 EEKPTVETTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITT 180
               T ++TP+               S   N  S+ATT+ARLAE+P IKNGS A+   +T
Sbjct: 121 ISSLTKDSTPL--------------PSNSRNMQSQATTYARLAEAPAIKNGSLAN---ST 180

Query: 181 DVEKLNDEFGLPVLPVSAENTGLLPKRPEEFKGSDIMLEAVLEAEVAHNAKEFFSSHQSQ 235
           +V K+ D+  L VLPVSAENTGLLP R  + KGSDI+ EA+LEAEVAHNAKEFFS  Q+Q
Sbjct: 181 EVGKIEDDLQLIVLPVSAENTGLLPNRGTDVKGSDIVQEAILEAEVAHNAKEFFSQPQNQ 222

The following BLAST results are available for this feature:

BLAST of CsaV3_5G004690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152379.1	4.6e-122	100.00	PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654829....	[more]
XP_008436983.1	5.8e-117	96.65	PREDICTED: sec-independent protein translocase protein TatB [Cucumis melo] >XP_0...	[more]
XP_022922242.1	8.4e-100	83.33	uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 unchar...	[more]
XP_023551431.1	3.2e-99	82.92	uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433....	[more]
XP_022972971.1	1.5e-96	82.08	uncharacterized protein LOC111471495 [Cucurbita maxima] >XP_022972972.1 uncharac...	[more]

BLAST of CsaV3_5G004690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43680.1	2.3e-43	47.90	unknown protein	[more]

BLAST of CsaV3_5G004690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A4G9I1\|TATB_HERAR	2.4e-05	32.43	Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans...	[more]
sp\|Q0C0V9\|TATB_HYPNA	5.9e-04	34.85	Sec-independent protein translocase protein TatB OS=Hyphomonas neptunium (strain...	[more]

BLAST of CsaV3_5G004690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KN15\|A0A0A0KN15_CUCSA	3.0e-122	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1	[more]
tr\|A0A1S3ATI2\|A0A1S3ATI2_CUCME	3.8e-117	96.65	sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|E5GCU4\|E5GCU4_CUCME	3.8e-117	96.65	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|I1L890\|I1L890_SOYBN	2.2e-64	60.76	Uncharacterized protein OS=Glycine max OX=3847 GN=100791066 PE=4 SV=1	[more]
tr\|A0A1S3E741\|A0A1S3E741_CICAR	6.4e-64	60.17	uncharacterized protein LOC101495456 isoform X1 OS=Cicer arietinum OX=3827 GN=LO...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G004690.1	CsaV3_5G004690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..125
None	No IPR available	PANTHER	PTHR35512	FAMILY NOT NAMED	coord: 1..236

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G004690	CSPI05G07250	Wild cucumber (PI 183967)	cpicucB285
CsaV3_5G004690	Cucsa.129540	Cucumber (Gy14) v1	cgycucB183
CsaV3_5G004690	CmaCh15G010920	Cucurbita maxima (Rimu)	cmacucB0352
CsaV3_5G004690	CmoCh15G011510	Cucurbita moschata (Rifu)	cmocucB0347
CsaV3_5G004690	Cp4.1LG13g02590	Cucurbita pepo (Zucchini)	cpecucB0209
CsaV3_5G004690	CsGy5G004680	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G004690	Carg23180	Silver-seed gourd	carcucB0580
CsaV3_5G004690	Cla003636	Watermelon (97103) v1	cucwmB440
CsaV3_5G004690	MELO3C005475	Melon (DHL92) v3.5.1	cucmeB353
CsaV3_5G004690	ClCG01G004480	Watermelon (Charleston Gray)	cucwcgB385
CsaV3_5G004690	Lsi09G004700	Bottle gourd (USVL1VR-Ls)	cuclsiB345
CsaV3_5G004690	MELO3C005475.2	Melon (DHL92) v3.6.1	cucmedB345
CsaV3_5G004690	Cla97C01G004680	Watermelon (97103) v2	cucwmbB351
CsaV3_5G004690	Bhi12G000451	Wax gourd	cucwgoB467

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G004690	Cucurbita pepo (Zucchini)	cpecucB0920
CsaV3_5G004690	Wax gourd	cucwgoB449