Cla003636 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003636
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	cDNA clone 002-101-B03 full insert sequence (AHRD V1 ***- B7EZ71_ORYSJ)
Location	Chr1 : 5597576 .. 5601022 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGCATTTCATATGGAGAACTCCTCCTCCTTATTGGGGCTACTGCTGCCTTCATTGGTAATTACTGCACTACCCTTTCTCACTTGCTATACCATCTAATAGATTTAAGCCGTGGATAGAGACCTGACTCCCATATGATTATGAAAAGGGCCAAAGGATCTCCCAATGATAGCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTGATGCAACAAACCCAAGCTCGCCAGGTATTTCTTATTTAGTTTGGCTAACTATTAGGAAATTCTTTGGTGATTTGTTGAAGGTTTCAGTAGCATTAGCATTGCCTTCTGGAAACACAATGGATAGTACATTGTAAAGATATGTTTTTAGGGAATGAACCATATATTAGGCCATGTTTAAGATCACTTTATCATGTTCATGTTTTTTAATCAATCAAAACCTATTTCAATTGTATGAAAATCTGTGTAAAAGTGTAAAGGTAAACATAGAATACAATCAATTATAAACAAATTATTTTCACTGTCACTCTCAAACCTGCCCTTAGTTATGGTCAAATTAGAAACTTGTTGGAGCTGATCAAAGAACTCTTTGGAATTGATTTGTTGATTTTGGAGCTAGGCTGAGTGGAAAAGTAAATTGCTAGAATTCAATGCGTATTGCACATCCTTTAACTGTTCTTGCTGATTAAATTAAATCATTGTCTATTTGATCCTCCTGTTTCTTTGTACCATTTTTGTAGAACATTTTTGGAGTTTTTTCCTTGCCCATTATGCAGGCAAATAGCAAGGACATTTAACTTTTACTTGACAGTCTACTGGATCATATTAGGTCCTACAGAACTACCAGATTTCCAGAATAGGTGTTCATGTGGCGTTTACTGTTTGTGGACAATATTGTTACATCAAGACTGCAATGAATTAGATTGAACCATATGCATTATGCAACAACAACATAATTGGACGATTATAAAAGTGATGGAATTTAATTTACATTGACGTTCTTTGATATGATTCTCTGTTTGCAGGTTCACAAGGAATTGCAAGACACTTTGGCTCAGATTGATGCTATTCGCCATGAAATTCGAAGCATTTCGATCTTGAATCCTGGGCCATTGACTCAGAGGCTTGTGGACAATCCTGAGCTCAAAGCAGCCGATGGTAGTGTAACTAGTACGTGATATGTATCCCTACTGCTAATCTTCACTAGGGCTTCTAGTTTTTGTAAGTGTTTTTTCCTCTTCCATTTCAAATGGTAGGTGATTCAGCAAAAGAGAAACCTACTGTCGAGATTACACCAGTTGCTAAGAAGACTGCACCGGCAGCTAACATCCTCAAGGTTCTTATTAATTGCTGAATATCATCATGGACCTTTTTTGCCACTACAAGTTTAAGCGACTTCAATGGATCTGCACTTTTCTTCAGGTTGCAACTTCAGAAATATCAAATGAGCACAGCCGAGCAACTACATTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGTTCCTCTGCCTCGTTGCCAATTACTAAAGACGTAGAAACGCTAAGTGACGAGTTTGAACTTCCTATGGTTTTACCTATCTCGGCCGAAAATGCTGGGTTGTTACCTAAGCGCCCGGGTACCTTATCTGTTATTGAATTAAAAGCTTTGATAATGATTGCCTTATTTTATAAACTTTTTCACCGGTAGCATTAAAATCTTGACTTGGGAGGTTAGTGCACTTGGAAGTAAGACATCAATTGATGAGGTGTTAGATGAGCTATGGACGGGTGGGACACCAATTATACCTGATAACCACGATGTATGTTCATTGTTCGATTGAGGATGGATAGACACTTTCTTTTAGAGGATAAATGGTTAGGTGAGATGTACCCAATGCAATAATGCATTTTAGGCGGTGGTGGAGTGCTTATGGCATAGCAAAAGGTTAGTTTTCATTCGTTATTTAGGATTGGATCATTTTGCATTAAAGTAGCTCGTATTGAGTCATCTGTACAAAAATCTCATGCCATTGTGTGGGGACTACGGGAAAAAAGGTACGATACAGTTTTTAGAGGGCTTTAGAGGTCTCTAAACAATGTTTGGTCCTTGGTACGATTCTATGTGGCTTCGTGGGCTTCTATAGCCAAGCCATTTAGTAATTATCTGGTAGAACTCATTCGACTTGATTGAAGGTTGTGTTTGTAGTTTGCCTTTCTTTTTTCTGGGTTCTCTTTTCATTTGTCCTTTTGTTCTTTCATTTTTTCAAGGGAAGTTTGGTTATTCATAAAATAATAATAATTATAAAAGCTATCAGGCTGTAAACATTTCATTCAGTTATTTTCCTAAATTAAATTGATATTTGTTATCTTGGGGGAATTTTTTTTTTAAGGAATCAAGTATTATGAATGATAACCACTTTGCAATTAGATTTGTGTTCCATGTATTGAAACTATTCGATTTTTTCAGAGGAGTTTAAAGGGTCTGACATAATGTTAGAAGCTGTATTAGAAGCAGAGGTGGCTCACAATGCAAAAGAATTTTTTTCACGTCCTCAAAATCAAACGAAACAGGAACAAGGATGACAATTTCATGAACATCATTTTGTTGCATCATAGCATTGATGAATGTGGCCTATAAATGAAGTTCAGAAGATTCAAAAAGCGTCCCAGGTATTCCCTGACTTCATATGTGGCATTTATGTAAGAAAATGCATTACATAGAAAGTTCCACTTTACACCTTCATATGTATATTTAAATTACTTTTGCCAGTCAGAAAGAAATAAGGGACAAGAAAGACATGTTCTGCTCATACTTATTGATCACCCCTTTATATTATAATGAAGTTGCATGCTCACAAAAACCAATTGTTTTCACTGGTTCTTATCAAGAATCCTTGCTGATAGAAATGGATATTCTTCTGCAGTTTTATAATTTTTCTACCGTATAATTTGTGTTTGAAATGAAAGGAAGTCGTGTGCATTTCCTATTGAAAAAGAAATATGATTCGTCTTATGGTTAATTGTGTTTTTCTTCATTGTACAGCTGTTCCTTTGATCATTCTCAAAGGATTTAACGCATTGACATCAAACTAGAAGGAGGGTTTGGAAACTCTATGAACTAAGTTTGAATTGATATCTTTATTAAAGTAATAGACAGTTGTCTCCAAGGATTGGTTCAAAGTGTAGCTATGTGGTTTGCATGCCCTTTTGATGAAAACAAAGTAATTATTTGTAAAATCTTTGAATGAGTAATTCCTCCCTGGTCATCTCTCATCAATTATGGTAGAGGTTTACTTGGTTTTTGATACTCTACATACATATTTTAGGTATTGTTTCATAACTATTTGAGTTTTTAAACTTTAAGCTCATGTGTACTACTTCTACTGATTTGTTCTTTTTATTTTGTTATTTACTTCCTACTAATGTTAAGCTTAG

mRNA sequence

ATGCTAGGCATTTCATATGGAGAACTCCTCCTCCTTATTGGGGCTACTGCTGCCTTCATTGGGCCAAAGGATCTCCCAATGATAGCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTGATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAATTGCAAGACACTTTGGCTCAGATTGATGCTATTCGCCATGAAATTCGAAGCATTTCGATCTTGAATCCTGGGCCATTGACTCAGAGGCTTGTGGACAATCCTGAGCTCAAAGCAGCCGATGGTGATTCAGCAAAAGAGAAACCTACTGTCGAGATTACACCAGTTGCTAAGAAGACTGCACCGGCAGCTAACATCCTCAAGGTTGCAACTTCAGAAATATCAAATGAGCACAGCCGAGCAACTACATTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGTTCCTCTGCCTCGTTGCCAATTACTAAAGACGTAGAAACGCTAAGTGACGAGTTTGAACTTCCTATGGTTTTACCTATCTCGGCCGAAAATGCTGGGTTGTTACCTAAGCGCCCGGCTTAG

Coding sequence (CDS)

ATGCTAGGCATTTCATATGGAGAACTCCTCCTCCTTATTGGGGCTACTGCTGCCTTCATTGGGCCAAAGGATCTCCCAATGATAGCAAGAATGGCAGGAAGGATGGCTGGCAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTGATGCAACAAACCCAAGCTCGCCAGGTTCACAAGGAATTGCAAGACACTTTGGCTCAGATTGATGCTATTCGCCATGAAATTCGAAGCATTTCGATCTTGAATCCTGGGCCATTGACTCAGAGGCTTGTGGACAATCCTGAGCTCAAAGCAGCCGATGGTGATTCAGCAAAAGAGAAACCTACTGTCGAGATTACACCAGTTGCTAAGAAGACTGCACCGGCAGCTAACATCCTCAAGGTTGCAACTTCAGAAATATCAAATGAGCACAGCCGAGCAACTACATTTGCCAGGTTGGCTGAATCACCAACCATAAAGAATGGTTCCTCTGCCTCGTTGCCAATTACTAAAGACGTAGAAACGCTAAGTGACGAGTTTGAACTTCCTATGGTTTTACCTATCTCGGCCGAAAATGCTGGGTTGTTACCTAAGCGCCCGGCTTAG

Protein sequence

MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQARQVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAADGDSAKEKPTVEITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSDEFELPMVLPISAENAGLLPKRPA

Homology

[Close]

BLAST of Cla003636 vs. Swiss-Prot
Match: TATB_HERAR (Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans GN=tatB PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 25/74 (33.78%), Postives = 44/74 (59.46%), Query Frame = 1


Query: 1  MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
          M+ I++ +L ++  A   FIGP+ LP +ARMAG + GRA  Y+   + +    M+  + R
Sbjct: 1  MIDIAFSKLAIIGVAALVFIGPEKLPTVARMAGTLFGRAQRYINDVKSEVSREMELDELR 60

Query: 61 QVHKELQDTLAQID 75
          ++HK++QD    ++
Sbjct: 61 KMHKDVQDAATDVE 74

[Close]

BLAST of Cla003636 vs. TrEMBL
Match: A0A0A0KN15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G166430 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.4e-88
Identity = 174/202 (86.14%), Postives = 188/202 (93.07%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLGISYGE+LLLIGATAA IGPKDLP+I+RMAGRMAGRAIGYVQLARGQFDS+M+QT AR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAAD----GDSAKEKPTVE 120
           +VHKELQDTLAQ+DAIRHEIRSISILNPGPLTQRLVDNPELKAAD     +SA+EKPTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 ITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSD 180
            TPVA+KTAPAA+ILKVATS+ISNEHSRATTFARLAESP IKNGSSASLPIT DVE L+D
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFELPMVLPISAENAGLLPKRP 199
           EF LP VLP+SAEN GLLPKRP
Sbjct: 181 EFGLP-VLPVSAENTGLLPKRP 201

[Close]

BLAST of Cla003636 vs. TrEMBL
Match: E5GCU4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.1e-87
Identity = 174/202 (86.14%), Postives = 185/202 (91.58%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLGISYGELLLLIGATAA IGPKDLP+I+RMAGRMAGRAIGYVQLARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAA----DGDSAKEKPTVE 120
           QVHKELQDTLAQ+DAIRHEIRSISILNPGPLTQRLVDNPELKAA      +SA+EKPTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 ITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSD 180
            TPVA+KTA  A+ILKVATS+ISNEHSRATTFARLAESP IKNGSSASLPIT DVE L+D
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFELPMVLPISAENAGLLPKRP 199
           EF LP VLP+SAEN GLLPKRP
Sbjct: 181 EFGLP-VLPVSAENTGLLPKRP 201

[Close]

BLAST of Cla003636 vs. TrEMBL
Match: V7BJE4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G177000g PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.2e-55
Identity = 123/200 (61.50%), Postives = 151/200 (75.50%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLG SYGE+LLL+GATAA IGPKDLP+I+R AGR+AGRAIGYVQLARGQF++VMQQ+QAR
Sbjct: 1   MLGFSYGEILLLLGATAAVIGPKDLPIISRTAGRLAGRAIGYVQLARGQFENVMQQSQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAADGDSAKEKPTVE--IT 120
           QVHKELQDT+AQ+DAIRHEIR+ISI+NPGPLT+  VDNP+  +   D++K + + E  + 
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRTISIINPGPLTRSFVDNPDQTSVPKDNSKPEDSGENHLK 120

Query: 121 P-VAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSDE 180
           P V K + P        +S   N  ++AT +ARLAESP IKN  SAS P    VE + D 
Sbjct: 121 PTVIKDSTP-------VSSNSCNMQNQATIYARLAESPAIKNELSASSP---KVEKIDDN 180

Query: 181 FELPMVLPISAENAGLLPKR 198
            +L  VLPISAE+AGLLP R
Sbjct: 181 LQLTTVLPISAESAGLLPNR 190

[Close]

BLAST of Cla003636 vs. TrEMBL
Match: I1L890_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G031500 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-54
Identity = 121/202 (59.90%), Postives = 152/202 (75.25%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLG SYGE+ LL+GATAA IGPKDLP+I R AGR+AGRAIGYVQLARGQFD+VMQQ+QAR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAADGDSAKEKPTVEITPV 120
           QVHKELQDT+AQ+DAIRHEIRSISI+NPGPLT+RLVD+P+  +   +S K + +      
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPDQTSISNESRKPEES------ 120

Query: 121 AKKTAPAANILKVATSEISNE---HSRATTFARLAESPTIKNGSSASLPITKDVETLSDE 180
            ++ +    ++K +TS  SN     ++AT ++RL  SP IKN  SAS   + +VE + D+
Sbjct: 121 GQENSSIPTVMKDSTSMSSNSCHMQNQATIYSRLVNSPAIKNELSAS---STEVEKIEDK 180

Query: 181 FELPMVLPISAENAGLLPKRPA 200
            +L  VLPISAENAGLLP R A
Sbjct: 181 LQL-TVLPISAENAGLLPIRGA 192

[Close]

BLAST of Cla003636 vs. TrEMBL
Match: A0A0L9TX71_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g125100 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-54
Identity = 122/202 (60.40%), Postives = 150/202 (74.26%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLG SYGE+ LL+GATAA IGPKDLP+I+R AGR+AGRAIGYVQLARGQF++VMQQ+QAR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIISRTAGRLAGRAIGYVQLARGQFENVMQQSQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAADGDSAKEKPTVEITPV 120
           QVHKELQDT+AQ+DAIRHEIRSISI+NPGPLT+R  DNP+  +   D  K + + E    
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRFADNPDQTSIPNDCKKPEDSGE---- 120

Query: 121 AKKTAPAANILKVATSEISNE---HSRATTFARLAESPTIKNGSSASLPITKDVETLSDE 180
                P   ++K +TS  SN     ++AT +AR AESP+IKN  SA   I+ +V  + D+
Sbjct: 121 ---NHPNPTVIKDSTSVSSNSCNMQNQATIYARFAESPSIKNELSA---ISPEVVKIDDK 180

Query: 181 FELPMVLPISAENAGLLPKRPA 200
            +L  VLPISAENAGLLP R A
Sbjct: 181 LQL-TVLPISAENAGLLPNRGA 191

[Close]

BLAST of Cla003636 vs. NCBI nr
Match: gi|449469341|ref|XP_004152379.1| (PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 9.2e-88
Identity = 174/202 (86.14%), Postives = 188/202 (93.07%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLGISYGE+LLLIGATAA IGPKDLP+I+RMAGRMAGRAIGYVQLARGQFDS+M+QT AR
Sbjct: 1   MLGISYGEVLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSMMEQTNAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAAD----GDSAKEKPTVE 120
           +VHKELQDTLAQ+DAIRHEIRSISILNPGPLTQRLVDNPELKAAD     +SA+EKPTVE
Sbjct: 61  KVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAADSGVTSNSAEEKPTVE 120

Query: 121 ITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSD 180
            TPVA+KTAPAA+ILKVATS+ISNEHSRATTFARLAESP IKNGSSASLPIT DVE L+D
Sbjct: 121 TTPVAEKTAPAASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFELPMVLPISAENAGLLPKRP 199
           EF LP VLP+SAEN GLLPKRP
Sbjct: 181 EFGLP-VLPVSAENTGLLPKRP 201

[Close]

BLAST of Cla003636 vs. NCBI nr
Match: gi|659073291|ref|XP_008436983.1| (PREDICTED: uncharacterized protein LOC103482550 [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 1.0e-86
Identity = 174/202 (86.14%), Postives = 185/202 (91.58%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLGISYGELLLLIGATAA IGPKDLP+I+RMAGRMAGRAIGYVQLARGQFDSVM+QT AR
Sbjct: 1   MLGISYGELLLLIGATAALIGPKDLPLISRMAGRMAGRAIGYVQLARGQFDSVMEQTHAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAA----DGDSAKEKPTVE 120
           QVHKELQDTLAQ+DAIRHEIRSISILNPGPLTQRLVDNPELKAA      +SA+EKPTVE
Sbjct: 61  QVHKELQDTLAQLDAIRHEIRSISILNPGPLTQRLVDNPELKAAASGVTSNSAEEKPTVE 120

Query: 121 ITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSD 180
            TPVA+KTA  A+ILKVATS+ISNEHSRATTFARLAESP IKNGSSASLPIT DVE L+D
Sbjct: 121 TTPVAEKTAAVASILKVATSQISNEHSRATTFARLAESPNIKNGSSASLPITTDVEKLND 180

Query: 181 EFELPMVLPISAENAGLLPKRP 199
           EF LP VLP+SAEN GLLPKRP
Sbjct: 181 EFGLP-VLPVSAENTGLLPKRP 201

[Close]

BLAST of Cla003636 vs. NCBI nr
Match: gi|593688111|ref|XP_007144690.1| (hypothetical protein PHAVU_007G177000g [Phaseolus vulgaris])

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-55
Identity = 123/200 (61.50%), Postives = 151/200 (75.50%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLG SYGE+LLL+GATAA IGPKDLP+I+R AGR+AGRAIGYVQLARGQF++VMQQ+QAR
Sbjct: 1   MLGFSYGEILLLLGATAAVIGPKDLPIISRTAGRLAGRAIGYVQLARGQFENVMQQSQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPELKAADGDSAKEKPTVE--IT 120
           QVHKELQDT+AQ+DAIRHEIR+ISI+NPGPLT+  VDNP+  +   D++K + + E  + 
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRTISIINPGPLTRSFVDNPDQTSVPKDNSKPEDSGENHLK 120

Query: 121 P-VAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSDE 180
           P V K + P        +S   N  ++AT +ARLAESP IKN  SAS P    VE + D 
Sbjct: 121 PTVIKDSTP-------VSSNSCNMQNQATIYARLAESPAIKNELSASSP---KVEKIDDN 180

Query: 181 FELPMVLPISAENAGLLPKR 198
            +L  VLPISAE+AGLLP R
Sbjct: 181 LQLTTVLPISAESAGLLPNR 190

[Close]

BLAST of Cla003636 vs. NCBI nr
Match: gi|1021561865|ref|XP_016172124.1| (PREDICTED: sec-independent protein translocase protein TatB-like [Arachis ipaensis])

HSP 1 Score: 222.6 bits (566), Expect = 6.0e-55
Identity = 128/209 (61.24%), Postives = 152/209 (72.73%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           MLG+SYGE+LLLIG TAA IGPKDLP+IAR AGR+AGRA+GYVQLARGQFDSVMQQTQAR
Sbjct: 1   MLGLSYGEILLLIGVTAAVIGPKDLPIIARTAGRLAGRAVGYVQLARGQFDSVMQQTQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNPE--------LKAADGDSAKEK 120
           QVHKELQDT+AQ+DAIRHEIRSIS++NPGP+T+RLVDNP+         KA D    K  
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISLINPGPMTRRLVDNPDQTSIPNGTKKAEDVGENKSI 120

Query: 121 P--TVEITPVAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKD 180
           P  T   TP   K +P      +A+S   N  S+ATT+ARLAES  IKN  +AS   + +
Sbjct: 121 PPATTNSTPTVIKDSPL-----LASSNSCNMQSQATTYARLAESAIIKNSLAAS---STE 180

Query: 181 VETLSDEFELPMVLPISAENAGLLPKRPA 200
            + +  E +   VLPISAE+AGLLP R A
Sbjct: 181 PQKIKPELQ-HTVLPISAESAGLLPNRSA 200

[Close]

BLAST of Cla003636 vs. NCBI nr
Match: gi|702422335|ref|XP_010067036.1| (PREDICTED: uncharacterized protein LOC104454031 [Eucalyptus grandis])

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54
Identity = 117/198 (59.09%), Postives = 142/198 (71.72%), Query Frame = 1


Query: 1   MLGISYGELLLLIGATAAFIGPKDLPMIARMAGRMAGRAIGYVQLARGQFDSVMQQTQAR 60
           M GISYGEL LLIGATAA IGPKDLP IAR AGR+AGRAIGYVQLARGQFDS+MQQTQAR
Sbjct: 1   MFGISYGELFLLIGATAALIGPKDLPFIARTAGRLAGRAIGYVQLARGQFDSIMQQTQAR 60

Query: 61  QVHKELQDTLAQIDAIRHEIRSISILNPGPLTQRLVDNP-ELKAADGDSAKEKPTVEITP 120
           QVHK+LQDT+AQ++AIRHEIRSI+ +NPGPLT+RLVD+P        +   E PT     
Sbjct: 61  QVHKDLQDTMAQLEAIRHEIRSITFINPGPLTRRLVDDPNNTSVGSSEKLPEAPTEGDAQ 120

Query: 121 VAKKTAPAANILKVATSEISNEHSRATTFARLAESPTIKNGSSASLPITKDVETLSDEFE 180
           +   T           S ++N HS+A  +A+LAESP I++GS  S   T + + L DE  
Sbjct: 121 ITNFTKGCG----TTGSNLTNMHSQAIKYAKLAESPAIRSGSPQS---TTEADRLDDESS 180

Query: 181 LPMVLPISAENAGLLPKR 198
           +P +LP+SAE AGLLP +
Sbjct: 181 IPTILPVSAETAGLLPNQ 191

The following BLAST results are available for this feature:

BLAST of Cla003636 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TATB_HERAR	2.7e-07	33.78	Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans...	[more]

BLAST of Cla003636 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN15_CUCSA	6.4e-88	86.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G166430 PE=4 SV=1	[more]
E5GCU4_CUCME	7.1e-87	86.14	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
V7BJE4_PHAVU	3.2e-55	61.50	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G177000g PE=4 SV=1	[more]
I1L890_SOYBN	3.5e-54	59.90	Uncharacterized protein OS=Glycine max GN=GLYMA_10G031500 PE=4 SV=1	[more]
A0A0L9TX71_PHAAN	3.5e-54	60.40	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g125100 PE=4 SV=1	[more]

BLAST of Cla003636 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469341\|ref\|XP_004152379.1\|	9.2e-88	86.14	PREDICTED: uncharacterized protein LOC101219447 [Cucumis sativus]	[more]
gi\|659073291\|ref\|XP_008436983.1\|	1.0e-86	86.14	PREDICTED: uncharacterized protein LOC103482550 [Cucumis melo]	[more]
gi\|593688111\|ref\|XP_007144690.1\|	4.6e-55	61.50	hypothetical protein PHAVU_007G177000g [Phaseolus vulgaris]	[more]
gi\|1021561865\|ref\|XP_016172124.1\|	6.0e-55	61.24	PREDICTED: sec-independent protein translocase protein TatB-like [Arachis ipaens...	[more]
gi\|702422335\|ref\|XP_010067036.1\|	1.7e-54	59.09	PREDICTED: uncharacterized protein LOC104454031 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005694	chromosome
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU41000	watermelon EST collection version 2.0	transcribed_cluster
WMU55860	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003636	Cla003636.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU41000	WMU41000	transcribed_cluster
WMU55860	WMU55860	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35512	FAMILY NOT NAMED	coord: 2..197 score: 1.5
None	No IPR available	PANTHER	PTHR35512:SF1	SUBFAMILY NOT NAMED	coord: 2..197 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003636	Cla97C01G004680	Watermelon (97103) v2	wmwmbB245
Cla003636	Csa5G166430	Cucumber (Chinese Long) v2	cuwmB415
Cla003636	MELO3C005475	Melon (DHL92) v3.5.1	mewmB033
Cla003636	ClCG01G004480	Watermelon (Charleston Gray)	wcgwmB154
Cla003636	CSPI05G07250	Wild cucumber (PI 183967)	cpiwmB424
Cla003636	Cucsa.129540	Cucumber (Gy14) v1	cgywmB216
Cla003636	CmaCh15G010920	Cucurbita maxima (Rimu)	cmawmB275
Cla003636	CmoCh15G011510	Cucurbita moschata (Rifu)	cmowmB265
Cla003636	Lsi09G004700	Bottle gourd (USVL1VR-Ls)	lsiwmB031
Cla003636	Cp4.1LG13g02590	Cucurbita pepo (Zucchini)	cpewmB190
Cla003636	CsGy5G004680	Cucumber (Gy14) v2	cgybwmB388
Cla003636	MELO3C005475.2	Melon (DHL92) v3.6.1	medwmB032
Cla003636	Carg23180	Silver-seed gourd	carwmB0539
Cla003636	CsaV3_5G004690	Cucumber (Chinese Long) v3	cucwmB440
Cla003636	Bhi12G000451	Wax gourd	wgowmB081

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003636	Melon (DHL92) v3.6.1	medwmB022
Cla003636	Wax gourd	wgowmB227
Cla003636	Melon (DHL92) v3.5.1	mewmB024
Cla003636	Cucurbita pepo (Zucchini)	cpewmB714