CsaV3_5G001450 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G001450
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionE3 ubiquitin-protein ligase MARCH2 isoform X2
Locationchr5 : 797179 .. 800629 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTTTGTCTTTTTTTATTAAAGAAAAGAAAAATCAAATTTTTAAAAAGGAATGATCTTTGTTGAGGGTGTCTTCGATGTGGAAGTGAGATTTGGCGCCTCAGTTGCTAAAGCAATATCCTTGTGTTTGTTGAAAGGCTACAAAATAACGTGGATTCATATACTCTTCTCATAAATCACGTAATTTCAAAACTCATTTTTTCTTTGCCTTTTCAATTCTCACCTAAAAGAAAAAGGATAAAGGGGGTTGAGAATTTCCCTATCCTTTTTTTCTTATTTCACCTCTGTTTCTACTGCTTCAACTGTTGAATCTTTAATCCTTCAAGTCTAAGTCTCCCAGGTACGAACCCTTTTGATTTTATTCGCTTTTGTTCCTGATTTTTGCTACTGTTGCTCTCCTAACCTCGTTTTCTATGTGTAATGCAACTCTTGTTTGGTTGGAAGCAATTTTGGTTTCATTTTGTTGATGGGTTTTGATTTCTTGAATTGGGTATTGTAGATTGAGGCTCGTTTGTGGTTTTGTAGTTCAATTGTTACATGTAATGCAATGTTCTCAATGTATTTTGGGTATTTTGTGTATTTTGTGTCTTAGTCGTTTGTTTGGGACTGAAAATAAATTTGTTAGGTGGAAATTATGCTTTCAATTGGTTGGTGGGTTTGTTTCGCTTTATTGGTGATGTGGGATGAACACTGAGTTGCAGATATTTTCTATTCAATTTAGGGTGTGAGAGAAAATTGAGCAAAGGGACGACTAGATGATGCTCAGAAATGTTAGTCAAAGACTTTTGTTGTTCTATTGATTCAAGTTTGTGGTGTTTGAAATTCAAATGAACCTTTCGATGGATTGCCATTCAAATGATGTAAAGGCCAAGGCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACCCTATTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGTGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGGTACATTTGAGTTGCTTCTGCTCCATTTAAAATGCATTTTCAATTGTTTTGTTCATTTGTGCTGCTACATTTTGGCAGAACCTTTTTTAGTTAGTTCCTCCTTCCTCATACTTTTGTTACTTGCGTTGTTTGTTCATTGTTTGTCATCCAAAAAACATTAGATAAACTCCTAAGTTTGCTTTTTGAAAATTGATACTTTATGTGGTTTGTTAAACCACCACTAAATTGATAAGGTTAAACCATGAATCAAATATGCGATCTATTTATGTAGATTTGGGGGTGGAAATGACTTTGTTGGTGAGGAGAGTTTGACTGAATTCTAAAAGCTTAAGTAGATGGAAGATATTTAATTTGTCTGTCACAGTAAGATTAGAGCCGCAAAAATGAGTATACTTCAATGGTTAAGGCATTTCCCTTGAGGTCGGAGGTTCAAGTCTTTGCCACACATTTGTTGCACTAAAGACTAAAGAGAAAAGATTAAATCCCTATTTTTTTTTACATTGTAGATGACACTTTTTCAAATATTGTTGTCTTTCCACAATTACTATTGGCTTCAATTATCTGGTTAATGTGTTGGAAAATGTAAAGGAAGTCGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACCAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTGCTTTTTTAGAGAATGCCATTTATTAAATTAAACCAATCATATGGTGTGTCAAGGGCATTTTGAAACGCAATTTGCTAAACTTTTCAGGGTTGTAGCGGCAAATGTATCACCTCCACAGTCACATCATGGTGTAGGTACTCTGTAGCTCTTGATGCAATGATTATAAACTTATAAAATGAAACGTCTCAATGAATATGGAATCAATTTTTTCGTCCTTTCTACAGTATTAGCGTTATTAGTTGATGACCAGTATCATGCTTTAGTTTTGCTTTTGCTAATTGCTACAGTTCCTTGCTTTCTTTTCCTACATTAGGAAGAAAGTTATCATGACATTTGATCTGTAATCTTTGCTTCTGAGTGTTTCTTTTATTTTGAAGGGCTTTACAAAGTAGCATAGTGAATATTTCTAAATAATGTTTTGCTTACCAGATTTGCAATGAAACTCAATAAGAATTATAGGCAAGGACAACTACGACCTTACTTATTCCGTAGGTTGTACAACCGTTTCCTTTTAAGTTCTAATACTTATAGGCAATGACTGCTGCTTCATCCTTCACAATTCTTCCTCTTCTTGGTGAATCAGAAATGTTGAGAAAGAGGAAAAGTGCAAAGTGGCAAAGATTCACTCGCCCACTAAACCACATCGAACAAAATCGAACTCATAAACTAAATAAATGGACATGAAAATTATTATGCTTCTGTTTTCTGTATATAGTCTTTACCTTTCAAACTATTGATTCATGAGAAATGCAGTTTAGAACCTTACAATTTAACATTGAACTTATGATTCATGGATGTCATATCGAAATAACCTGAACTATGATTATTCCCTTATTTGACATGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGGTAGCAAGATTTGATTTTGATTTTTCCAGTGATATGCTTGTTTCATTTGTTGTTAAAAAACATGAAACATTTTTCATAATTATTTATGCAACAGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGTACGTTTTTGTCGATCGATACCGATCTATACTTCTGTTTCCTTGTCGAGATATTTATGGTTAGTGAAACTTCGAAGAACAGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCATCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAGTCTTCGAATGTTTGCTTAAAAAAGAAGAAAAAGGAAACGTTATATAAATAAAGTGAAAATATATCTTATTCTTGTTTTTTTTCTCTACGTGTATTGGCCTCTTGATCAAACATATTAGTTTAACTTGTTGTGTAAATTTGACAATAAATCAGTAAATATGTTTACTTCAATTGCAAGTGGTAAGCAATAAAATTTTATGTTTTGACGACGTTTTATATTAG

mRNA sequence

ATGAACCTTTCGATGGATTGCCATTCAAATGATGTAAAGGCCAAGGCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACCCTATTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGTGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACCAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAGTCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCATCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Coding sequence (CDS)

ATGAACCTTTCGATGGATTGCCATTCAAATGATGTAAAGGCCAAGGCCGGCGGGAATCAGAGCAATGAAGGCGACCTTGAGAAGCAGAGAGTTGCTCAACCATCATCATCAGCATTAGAGCTCTCTACCAGAGATGGTGATGATAATACCCTATTAACCATTGTTGTTTCTACAGGGGAGTCTAAACCAACCTCTGAGGTTCCTGGTCCTGGGACTCTTCGCTCTCAAGAAGAAGTGATATTGGCTTGTGCAGTTTCCCCAAAAAAGGAGCTCTTGTCTACTACTTCTGGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTGATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGTATAGATACTTGGTTTCGTACCAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAGTCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTATAGAACTCAAGATCCCCAAAGGTACTGCTTCAGTCCACTTTGGTTGGCTTTTGCCATTCTCATAGGAGGTCTCCTACTAGATATTCTCATATCAATCACCCTCGGTGTTTCCGCATTGCCTGTAAATATCATCATCGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCTTTGGAGTTCTTTCAGGAGTGGAATTCATCAAGAGGATCACAAAGGGTGGAATCAAATGTCACTATTGGGTACTTTCCAGCTATATAG

Protein sequence

MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSSRGSQRVESNVTIGYFPAI
Homology
[Close]
BLAST of CsaV3_5G001450 vs. NCBI nr
Match: XP_004145881.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis sativus] >KGN49961.1 hypothetical protein Csa_5G146840 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 8.5e-146
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNSSRGSQRVESNVTIGYFPAI
Sbjct: 241 WNSSRGSQRVESNVTIGYFPAI 262

[Close]
BLAST of CsaV3_5G001450 vs. NCBI nr
Match: XP_011654668.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus] >XP_011654669.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 2.1e-144
Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSSRGSQRVESNVTIGYFPAI 263
           EWNSSRGSQRVESNVTIGYFPAI
Sbjct: 241 EWNSSRGSQRVESNVTIGYFPAI 263

[Close]
BLAST of CsaV3_5G001450 vs. NCBI nr
Match: XP_008437468.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 1.2e-134
Identity = 248/262 (94.66%), Postives = 249/262 (95.04%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNS+R SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 261

[Close]
BLAST of CsaV3_5G001450 vs. NCBI nr
Match: XP_008437466.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_016903259.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo])

HSP 1 Score: 484.2 bits (1245), Expect = 2.8e-133
Identity = 248/263 (94.30%), Postives = 249/263 (94.68%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSSRGSQRVESNVTIGYFPAI 263
           EWNS+R SQRVESNVTIGYFPAI
Sbjct: 241 EWNSARVSQRVESNVTIGYFPAI 262

[Close]
BLAST of CsaV3_5G001450 vs. NCBI nr
Match: XP_011654670.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH9 isoform X3 [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 9.5e-129
Identity = 243/262 (92.75%), Postives = 244/262 (93.13%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG                  
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG------------------ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           +YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 QYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNSSRGSQRVESNVTIGYFPAI
Sbjct: 241 WNSSRGSQRVESNVTIGYFPAI 244

[Close]
BLAST of CsaV3_5G001450 vs. TAIR10
Match: AT2G45530.1 (RING/U-box superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 6.0e-69
Identity = 137/218 (62.84%), Postives = 161/218 (73.85%), Query Frame = 0 

Query: 52  LTIVVSTGESKPTSEVPGPGTLRSQEEVILACAVSPKKEL-LSTTSGSDEQCRICQQEKE 111
           LTIVV  G+S             S+EE  L   + P+KE+ LS    S EQCR+C Q+KE
Sbjct: 38  LTIVVCNGDS-------------SREE--LVGQIPPEKEVSLSRNGSSHEQCRVCLQDKE 97

Query: 112 EVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRI 171
           EVLIELGC CRGGLAKAHR+CID WFRTKGSN+CEICQVVA NV+PP++   TNYW+WRI
Sbjct: 98  EVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNVTPPETQPTTNYWVWRI 157

Query: 172 DPTYRTQDPQRYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTV 231
           DP+YR ++ +R CFSPLW+AF+ILIGGL+LD+LISITLGVSALPVNIIIGVIVVLGLGT 
Sbjct: 158 DPSYRQEERERGCFSPLWVAFSILIGGLMLDVLISITLGVSALPVNIIIGVIVVLGLGTA 217

Query: 232 FRLALEFFQEWNSSRG----SQRVESN--VTIGYFPAI 263
            RL LEF  EW+  R      QR E+N    I Y PA+
Sbjct: 218 LRLTLEFCYEWSLRRAVHXXXQRAEANNFSNIAYPPAL 240

[Close]
BLAST of CsaV3_5G001450 vs. TAIR10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 8.8e-12
Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 95  TSGSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVA 154
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF+ KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

[Close]
BLAST of CsaV3_5G001450 vs. TAIR10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-11
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 0 

Query: 96  SGSDEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQV 155
           S S+  CRIC         +  V IELGC C+  LA AH+ C +TWF+ KG+  CE+C  
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

[Close]
BLAST of CsaV3_5G001450 vs. TAIR10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09
Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 

Query: 93  STTSGS-----DEQCRICQQEKEEVLIE------LGCHCRGGLAKAHRTCIDTWFRTKGS 152
           S  SGS     ++ CRIC    E    E      LGC C+  L   H+ C DTWF+ KG+
Sbjct: 64  SVASGSIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

Query: 153 NRCEICQVVAAN 154
             CEIC+ +A N
Sbjct: 124 KTCEICRSIAQN 135

[Close]
BLAST of CsaV3_5G001450 vs. TAIR10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-08
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0 

Query: 117 GCHCRGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSH 161
           GC C+G L  AH  C +TWF+ KG+  CEIC  +A NV+  QS+
Sbjct: 133 GCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSN 176

[Close]
BLAST of CsaV3_5G001450 vs. TrEMBL
Match: tr|A0A0A0KQJ1|A0A0A0KQJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 5.6e-146
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE
Sbjct: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNSSRGSQRVESNVTIGYFPAI
Sbjct: 241 WNSSRGSQRVESNVTIGYFPAI 262

[Close]
BLAST of CsaV3_5G001450 vs. TrEMBL
Match: tr|A0A1S3AU35|A0A1S3AU35_CUCME (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 7.6e-135
Identity = 248/262 (94.66%), Postives = 249/262 (95.04%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNS+R SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 261

[Close]
BLAST of CsaV3_5G001450 vs. TrEMBL
Match: tr|A0A1S3AU77|A0A1S3AU77_CUCME (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.9e-133
Identity = 248/263 (94.30%), Postives = 249/263 (94.68%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180

Query: 181 R-YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
           R YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 RQYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSSRGSQRVESNVTIGYFPAI 263
           EWNS+R SQRVESNVTIGYFPAI
Sbjct: 241 EWNSARVSQRVESNVTIGYFPAI 262

[Close]
BLAST of CsaV3_5G001450 vs. TrEMBL
Match: tr|A0A1S4E4V2|A0A1S4E4V2_CUCME (E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 8.5e-118
Identity = 229/262 (87.40%), Postives = 231/262 (88.17%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG                  
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG------------------ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
           +YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 QYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNS+R SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 243

[Close]
BLAST of CsaV3_5G001450 vs. TrEMBL
Match: tr|A0A1S4E4V4|A0A1S4E4V4_CUCME (E3 ubiquitin-protein ligase MARCH9 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.9e-117
Identity = 229/262 (87.40%), Postives = 230/262 (87.79%), Query Frame = 0 

Query: 1   MNLSMDCHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGE 60
           M LSMDCHSNDVKA AG NQSNEGDLEKQRVAQPSSS LELSTRDGDDNT LTIVVSTGE
Sbjct: 1   MKLSMDCHSNDVKANAGRNQSNEGDLEKQRVAQPSSS-LELSTRDGDDNTPLTIVVSTGE 60

Query: 61  SKPTSEVPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHC 120
           SKPTSEVPGPGTL SQEE  LACAVSPKKE  ST S SDEQCRICQQEKEEVLIELGCHC
Sbjct: 61  SKPTSEVPGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHC 120

Query: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQ 180
           RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG                  
Sbjct: 121 RGGLAKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG------------------ 180

Query: 181 RYCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240
            YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE
Sbjct: 181 -YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQE 240

Query: 241 WNSSRGSQRVESNVTIGYFPAI 263
           WNS+R SQRVESNVTIGYFPAI
Sbjct: 241 WNSARVSQRVESNVTIGYFPAI 242

The following BLAST results are available for this feature:
BLAST of CsaV3_5G001450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145881.18.5e-146100.00PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis sativus] >KGN4... [more]
XP_011654668.12.1e-14499.62PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus] >XP_0... [more]
XP_008437468.11.2e-13494.66PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo][more]
XP_008437466.12.8e-13394.30PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_0169... [more]
XP_011654670.19.5e-12992.75PREDICTED: E3 ubiquitin-protein ligase MARCH9 isoform X3 [Cucumis sativus][more]
BLAST of CsaV3_5G001450 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45530.16.0e-6962.84RING/U-box superfamily protein[more]
AT2G37950.18.8e-1250.79RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G05830.15.7e-1144.62RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G01070.29.1e-0940.28RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G59000.13.5e-0850.00RING/FYVE/PHD zinc finger superfamily protein[more]
BLAST of CsaV3_5G001450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G001450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQJ1|A0A0A0KQJ1_CUCSA5.6e-146100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1[more]
tr|A0A1S3AU35|A0A1S3AU35_CUCME7.6e-13594.66E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A1S3AU77|A0A1S3AU77_CUCME1.9e-13394.30E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A1S4E4V2|A0A1S4E4V2_CUCME8.5e-11887.40E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A1S4E4V4|A0A1S4E4V4_CUCME1.9e-11787.40E3 ubiquitin-protein ligase MARCH9 isoform X4 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR033275MARCH-like
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G001450.1CsaV3_5G001450.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 101..148
e-value: 3.9E-15
score: 66.3
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 102..147
e-value: 7.6E-11
score: 41.9
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 94..154
score: 19.313
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 87..156
e-value: 6.1E-14
score: 53.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availablePANTHERPTHR23012:SF82SUBFAMILY NOT NAMEDcoord: 79..254
NoneNo IPR availableCDDcd16495RING_CH-C4HC3_MARCHcoord: 102..148
e-value: 2.44721E-13
score: 61.5744
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 98..150
IPR033275E3 ubiquitin-protein ligase MARCH-likePANTHERPTHR23012MEMBRANE ASSOCIATED RING FINGERcoord: 79..254

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G001450CSPI05G04070Wild cucumber (PI 183967)cpicucB285
CsaV3_5G001450Cucsa.193330Cucumber (Gy14) v1cgycucB308
CsaV3_5G001450CmaCh15G013360Cucurbita maxima (Rimu)cmacucB0352
CsaV3_5G001450CmaCh02G009550Cucurbita maxima (Rimu)cmacucB0734
CsaV3_5G001450CmoCh15G013970Cucurbita moschata (Rifu)cmocucB0347
CsaV3_5G001450CmoCh02G009630Cucurbita moschata (Rifu)cmocucB0724
CsaV3_5G001450Cp4.1LG00g00870Cucurbita pepo (Zucchini)cpecucB0017
CsaV3_5G001450Cp4.1LG05g07620Cucurbita pepo (Zucchini)cpecucB0909
CsaV3_5G001450CsGy5G001320Cucumber (Gy14) v2cgybcucB232
CsaV3_5G001450Carg21325Silver-seed gourdcarcucB0394
CsaV3_5G001450Carg08519Silver-seed gourdcarcucB0750
CsaV3_5G001450Cla004978Watermelon (97103) v1cucwmB433
CsaV3_5G001450MELO3C005804Melon (DHL92) v3.5.1cucmeB357
CsaV3_5G001450ClCG01G001320Watermelon (Charleston Gray)cucwcgB385
CsaV3_5G001450Lsi09G001180Bottle gourd (USVL1VR-Ls)cuclsiB345
CsaV3_5G001450MELO3C005804.2Melon (DHL92) v3.6.1cucmedB349
CsaV3_5G001450Cla97C01G001340Watermelon (97103) v2cucwmbB351
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G001450Cucumber (Gy14) v2cgybcucB186
CsaV3_5G001450Cucumber (Gy14) v1cgycucB136
CsaV3_5G001450Cucurbita maxima (Rimu)cmacucB0407
CsaV3_5G001450Wild cucumber (PI 183967)cpicucB237
CsaV3_5G001450Melon (DHL92) v3.5.1cucmeB418
CsaV3_5G001450Watermelon (97103) v2cucwmbB411
CsaV3_5G001450Wax gourdcucwgoB448
CsaV3_5G001450Cucumber (Chinese Long) v3cuccucB175