Cla97C01G001340 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G001340
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	RING zinc finger-containing protein
Location	Cla97Chr01 : 1137343 .. 1139770 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGGTATATTTGAATTGCTACTCTTCCATGAAAAATGCTCTTCCAATTGTTCTGTTCGTGTCTGCTTGTCCATTTTGGCATCACTTTCAAGTTAGTTCCTCCTTCCTCATGTTGTTGTTATTTATGTTGTTTGTTCATTGCTTGTCAGCCATAAAACATTAGATAGACTCCCATGTTTTCTGGTTGAAAATTGATACTTTCTGTAGTTTGTTAAATCACTGCTAAATCGATAAGGTTAAGCCATGAATCAAATATATGATCTATTTATGTAAATTAGGGGAGGAAATGACTTTGCTGGAGAGGAGAGTTAGACTAAATCTAAAAGCTTAAGTTGATGGAATATATTTAATTTGTTTGCATATAGTCCTAGTAAGATTAGAACTGCAAACGTTAGTATAGCTCAATGCTTCTTCTCCCCTTGAGATTGGAGGTTCAAGTCTCCACCGCACATTTGTTGCACTAAAGACTAAAGAGAAAAGATTAAAGCCCTATTTTTGTACATTGTAGATAACATTTTTTCAAATATTGTTGTCTTTCCATGTAATCTGCATTATAGTGAAGTATGTCCACAGTTACCATTGGCTTCAAGTATCTGGTTAATGTGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTGCTTTTTGGAAGGATGACTTTCATTAATTTAACATAATCATATCGTTTCGGCCATCGGGGGGCATTTTGAAATGTAATTTTGCTAAGTTTTTCAGGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTGTAGGTACTCTGTAGCTCTTGGTGCAATGATTATGATTAGTTTTCAATTCCTAGCATTTTCCATCTTCATTAATCCCAATTGTAAAACTTAAAAAATCATATGTCTCAAGGAATATTGAATTAGTATTTTTGTCTTGACTACGGTGTTAGTGTTATTAGTTAATGATCAACATCATGTTTTAGTTTTGCATTTGCTACAATTCTTCACTTTCTTTTCCCACATCAGGAAAAGAGTTATCATGACATTTTCATCTGAAATCTTTGCTTCTAAATGTTCCTTTTATTTTGAAAGGCTTTATGAAGTAGAATAGTGAATATTTCTAAGTGATGTGTATCATAAGAATTATAGGCAAGGACAATTATGACATACTTGAACAGGATTTGTTCTATAGATTGTACAACTTTGTCCTTGAGTTCTAAAACTTATAGGCGAGGACAAGTGATTCATCATTCACGATTCTTCCTCTCCTAGGTGAATTAGAAATGTTAAGAAAGAAGAGACATGTTAAGTGGCAAAAAGTCACGCGTGCATTAACCCATATACGAACAAAACCAAACTCATAAACTAAATATACGGACATGGAAATTATTATGCTTCTATTTTTCTTTGTATTGTCTTTACCTATAAATTCAAACTATTGATTCATGAAAATTGTATATTTTAGCATTGAACATATGATCTAATGGATGGATATTGCATCGAAATGACCTGAACTTTGATTATTCCTTATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGGTAGTAAGACTTCCACTTTTCCAATGATATGCTTGTTTCATTTGTTGTCAAAAAGCCATGAAACCTTGTTCATAATTGTTTATGCAGCAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGTATGTTTTCGTTGATCGAGCTATATCTCTAGTTTCATGTGGAGCTTTTTATGGTTATTGAAACTTTGAAGAACAGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAG

mRNA sequence

ATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGCAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAG

Coding sequence (CDS)

ATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGCAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAG

Protein sequence

MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSSASTRDADDNTQLTIVVSTGESKPISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQRVESNVTIGYFPAI

Homology

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_011654668.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus] >XP_011654669.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 7.3e-126
Identity = 234/257 (91.05%), Postives = 240/257 (93.39%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKPISE 63
           CHSNDVK   G NQ+N+GDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP SE
Sbjct: 7   CHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSE 66

Query: 64  VPGPGTLCSQEG-LLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 123
           VPGPGTL SQE  +L C+VS KKELLSTTS SDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 67  VPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAK 126

Query: 124 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFS 183
           AHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQ+CFS
Sbjct: 127 AHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQYCFS 186

Query: 184 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTR 243
           PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS+R
Sbjct: 187 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSSR 246

Query: 244 GSQRVESNVTIGYFPAI 257
           GSQRVESNVTIGYFPAI
Sbjct: 247 GSQRVESNVTIGYFPAI 263

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_008437466.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_016903259.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 1.6e-125
Identity = 233/256 (91.02%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQ+CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQYCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 246

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_004145881.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis sativus] >KGN49961.1 hypothetical protein Csa_5G146840 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 6.8e-124
Identity = 233/257 (90.66%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKPISE 63
           CHSNDVK   G NQ+N+GDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP SE
Sbjct: 7   CHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSE 66

Query: 64  VPGPGTLCSQEG-LLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 123
           VPGPGTL SQE  +L C+VS KKELLSTTS SDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 67  VPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAK 126

Query: 124 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFS 183
           AHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR +CFS
Sbjct: 127 AHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-YCFS 186

Query: 184 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTR 243
           PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS+R
Sbjct: 187 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSSR 246

Query: 244 GSQRVESNVTIGYFPAI 257
           GSQRVESNVTIGYFPAI
Sbjct: 247 GSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_008437468.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.5e-123
Identity = 232/256 (90.62%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR +CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-YCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 246

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 261

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_022995601.1 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 416.0 bits (1068), Expect = 9.3e-113
Identity = 213/257 (82.88%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSS-ASTRDADDNTQLTIVVSTGESKPIS 60
           MS CH NDVK NT A +NN+ DLEKQRV  PS++  ST D DD+T LTIVVS GE K +S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           EVP       +E LLPC+VS  KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  EVP-------REKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFS 180
           AHRTCIDTWF +KGSNRCEICQVVAANVSPPQSHH TNYWIWRIDPTYRTQ+P+RQ  FS
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHATNYWIWRIDPTYRTQEPERQRYFS 180

Query: 181 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTR 240
           PLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEWNSTR
Sbjct: 181 PLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEWNSTR 240

Query: 241 GSQRVESNVTIGYFPAI 257
           GSQRVESNVTIGYFPAI
Sbjct: 241 GSQRVESNVTIGYFPAI 250

[Close]

BLAST of Cla97C01G001340 vs. TrEMBL
Match: tr|A0A1S3AU77|A0A1S3AU77_CUCME (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.1e-125
Identity = 233/256 (91.02%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQ+CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQYCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 246

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. TrEMBL
Match: tr|A0A0A0KQJ1|A0A0A0KQJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 4.5e-124
Identity = 233/257 (90.66%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKPISE 63
           CHSNDVK   G NQ+N+GDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP SE
Sbjct: 7   CHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSE 66

Query: 64  VPGPGTLCSQEG-LLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 123
           VPGPGTL SQE  +L C+VS KKELLSTTS SDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 67  VPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAK 126

Query: 124 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFS 183
           AHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR +CFS
Sbjct: 127 AHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-YCFS 186

Query: 184 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTR 243
           PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS+R
Sbjct: 187 PLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSSR 246

Query: 244 GSQRVESNVTIGYFPAI 257
           GSQRVESNVTIGYFPAI
Sbjct: 247 GSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. TrEMBL
Match: tr|A0A1S3AU35|A0A1S3AU35_CUCME (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.0e-123
Identity = 232/256 (90.62%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR +CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQR-YCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 246

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 261

[Close]

BLAST of Cla97C01G001340 vs. TrEMBL
Match: tr|A0A1S4E4V2|A0A1S4E4V2_CUCME (E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.0e-108
Identity = 214/256 (83.59%), Postives = 218/256 (85.16%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG                   Q+CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG-------------------QYCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 243

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 243

[Close]

BLAST of Cla97C01G001340 vs. TrEMBL
Match: tr|A0A1S4E4V4|A0A1S4E4V4_CUCME (E3 ubiquitin-protein ligase MARCH9 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.0e-107
Identity = 213/256 (83.20%), Postives = 217/256 (84.77%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIWRIDPTYRTQDPQRQHCFSP 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG                    +CFSP
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG--------------------YCFSP 186

Query: 184 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRG 243
           LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNS R 
Sbjct: 187 LWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSARV 242

Query: 244 SQRVESNVTIGYFPAI 257
           SQRVESNVTIGYFPAI
Sbjct: 247 SQRVESNVTIGYFPAI 242

[Close]

BLAST of Cla97C01G001340 vs. Swiss-Prot
Match: sp|Q5XH39|MARH8_XENLA (E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis OX=8355 GN=march8 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 26/70 (37.14%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 75  PCSVS--SKKELLSTTSSSDEQCRICQQE-KEEVLIELGCHCRGGLAKAHRTCIDTWFHT 134
           P SVS  S+    S T SS + CRIC  E  +E  +   CHC G L   H+ C+  W  +
Sbjct: 31  PTSVSAPSRFPRTSVTPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS 90

Query: 135 KGSNRCEICQ 142
             +  CE+C+
Sbjct: 91  SDTRCCELCK 100

[Close]

BLAST of Cla97C01G001340 vs. TAIR10
Match: AT2G45530.1 (RING/U-box superfamily protein)

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-66
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0


Query: 42  DNTQLTIVVSTGESKPISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQE 101
           ++  LTIVV  G+S             S+E L+      K+  LS   SS EQCR+C Q+
Sbjct: 34  ESNHLTIVVCNGDS-------------SREELVGQIPPEKEVSLSRNGSSHEQCRVCLQD 93

Query: 102 KEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGTNYWIW 161
           KEEVLIELGC CRGGLAKAHR+CID WF TKGSN+CEICQVVA NV+PP++   TNYW+W
Sbjct: 94  KEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNVTPPETQPTTNYWVW 153

Query: 162 RIDPTYRTQDPQRQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGL 221
           RIDP+YR Q+ + + CFSPLW+AF+ILIGGL+LD+LISITLGVSALPVNIIIGVIVVLGL
Sbjct: 154 RIDPSYR-QEERERGCFSPLWVAFSILIGGLMLDVLISITLGVSALPVNIIIGVIVVLGL 213

Query: 222 GTVFRLALEFFQEWNSTRG----SQRVESN--VTIGYFPAI 257
           GT  RL LEF  EW+  R      QR E+N    I Y PA+
Sbjct: 214 GTALRLTLEFCYEWSLRRAVHXXXQRAEANNFSNIAYPPAL 240

[Close]

BLAST of Cla97C01G001340 vs. TAIR10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 88  TSSSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVA 147
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF  KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

[Close]

BLAST of Cla97C01G001340 vs. TAIR10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10
Identity = 42/122 (34.43%), Postives = 54/122 (44.26%), Query Frame = 0


Query: 32  SSSASTRDADDNTQLTIVVSTGESKPISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSS 91
           SSS    D +       V    E     E     ++CS E  L   +  K   L   S S
Sbjct: 19  SSSGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHL---SQS 78

Query: 92  DEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAA 148
           +  CRIC         +  V IELGC C+  LA AH+ C +TWF  KG+  CE+C  +A 
Sbjct: 79  ERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAG 137

[Close]

BLAST of Cla97C01G001340 vs. TAIR10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-08
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 110 GCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSH 154
           GC C+G L  AH  C +TWF  KG+  CEIC  +A NV+  QS+
Sbjct: 133 GCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSN 176

[Close]

BLAST of Cla97C01G001340 vs. TAIR10
Match: AT5G03180.2 (RING/U-box superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 95  CRIC--QQEKEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANV 148
           CRIC  + E++E   ++ C C+G LA AH+TC   WF  KG+  C++C+    N+
Sbjct: 251 CRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNL 305

The following BLAST results are available for this feature:

BLAST of Cla97C01G001340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654668.1	7.3e-126	91.05	PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis sativus] >XP_0...	[more]
XP_008437466.1	1.6e-125	91.02	PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_0169...	[more]
XP_004145881.1	6.8e-124	90.66	PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis sativus] >KGN4...	[more]
XP_008437468.1	1.5e-123	90.63	PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X2 [Cucumis melo]	[more]
XP_022995601.1	9.3e-113	82.88	E3 ubiquitin-protein ligase MARCH2-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cla97C01G001340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AU77\|A0A1S3AU77_CUCME	1.1e-125	91.02	E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0KQJ1\|A0A0A0KQJ1_CUCSA	4.5e-124	90.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1	[more]
tr\|A0A1S3AU35\|A0A1S3AU35_CUCME	1.0e-123	90.63	E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S4E4V2\|A0A1S4E4V2_CUCME	2.0e-108	83.59	E3 ubiquitin-protein ligase MARCH9 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S4E4V4\|A0A1S4E4V4_CUCME	1.0e-107	83.20	E3 ubiquitin-protein ligase MARCH9 isoform X4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Cla97C01G001340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5XH39\|MARH8_XENLA	1.7e-04	37.14	E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis OX=8355 GN=march8 PE=2 SV=2	[more]

BLAST of Cla97C01G001340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45530.1	1.6e-66	60.63	RING/U-box superfamily protein	[more]
AT2G37950.1	2.5e-11	50.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	6.2e-10	34.43	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	5.8e-08	50.00	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G03180.2	1.7e-07	40.00	RING/U-box superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033275	MARCH-like
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G001340.1	Cla97C01G001340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 94..141 e-value: 6.7E-14 score: 62.2
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 95..140 e-value: 1.6E-10 score: 40.9
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 87..147 score: 19.197
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 78..149 e-value: 6.3E-14 score: 53.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	PANTHER	PTHR23012:SF82	SUBFAMILY NOT NAMED	coord: 71..248
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 95..141 e-value: 1.71634E-12 score: 59.2632
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 90..143
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	MEMBRANE ASSOCIATED RING FINGER	coord: 71..248

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G001340	Cla004978	Watermelon (97103) v1	wmwmbB235
Cla97C01G001340	Csa5G146840	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G001340	MELO3C005804	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G001340	ClCG01G001320	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G001340	CSPI05G04070	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G001340	Cucsa.193330	Cucumber (Gy14) v1	cgywmbB357
Cla97C01G001340	CmaCh02G009550	Cucurbita maxima (Rimu)	cmawmbB605
Cla97C01G001340	CmaCh15G013360	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G001340	CmoCh15G013970	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G001340	CmoCh02G009630	Cucurbita moschata (Rifu)	cmowmbB581
Cla97C01G001340	Lsi09G001180	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G001340	CsGy5G001320	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G001340	MELO3C005804.2	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G001340	Carg21325	Silver-seed gourd	carwmbB0376
Cla97C01G001340	Carg08519	Silver-seed gourd	carwmbB0739
Cla97C01G001340	CsaV3_5G001450	Cucumber (Chinese Long) v3	cucwmbB351

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G001340	Watermelon (97103) v2	wmbwmbB034
Cla97C01G001340	Wax gourd	wgowmbB055