CsaV3_4G035090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G035090
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionLIM domain-containing protein
Locationchr4 : 24766233 .. 24770166 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTGTCTCCTTTCTTTTTGTAGGGGATGTGCAGTATAGTATGGTCAAAATACAGCTTTAATGTCACTAAAGTCATATCATCTAATGACTTAGCCCCGTGACAAACTTAGTTTTTACTCTGTAACATTGATAAAGATACTTGATAGATTAGGTAATTTCAATAGGAAGTAATAGCAATTTAATTCAAAGAAATAAGGGGGGAAGTGGGGAAAAAAATCAAAGGGAGAGAGAGAGGGATGGTTGGTTGGGTTGGATGCTTGCAAATCCAGACAAATTGATTACCATTTATGCCCTTCAACTTTAGATTTGTCTACTTGAATCTCTCTTATACATACACCCATATCTTTTGCATCCATAGCCCAATTTCTATCTCTCTGCCCTCTTCCTTATCTCCTTCACATTGTCTTCTTCTTCCTCCTAACACCGACTCAAATTTCAACACCAAGAAACTATAGGATTCTTTTGCAATTGCTATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTAGACAAACTTACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTCAAGGTAAATCAAATCTCTGATCTGTTATGTCGTTTCAGTGTAATCAGATTTCAGATCGCTAATTGGGAAGATTATTTTTGGTGGGCTGTGGTTAACATCAAACGAGATCTGATTTGCAGTTAAGTAATTACAATTCGTTTGAAGGAGTGCTTTACTGTCGGCCACACTTTGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAGAGCTTTGAAGGTATTTAAAATTATGAGAAAATTTCGCTTTAAAGTCATTTCTCATTAGATCAAACCAACAACATTCTTATCTTGATTTTAGGAACACCAAAGATTGGAAAACCGGAGAAACCGGGTGATTCTGAGGTAGCTAATTAATTGTATCATGCTTTGTTATGCTCTGTTTTGTGTTAATTTCAACTTAAAATACATATTTGTCAGAAACCAACAGCGACTAAGGTTGCAAGTATGTTCGTCGGTACTAAAGATAAGTGTCTTGGATGTAACAAGACTGTTTATCCAACTGAGAAGGTAAATTTGAGGTGAAATTTAACTTTGTAAATGAAGAAAGCTTTGTTTTGAAGTGGGTAAACTTTAACATCATAATTTTTCAGGTTTCAGTAAATGGAACTTCGTACCATAAAAGCTGTTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCGAATTACATTGCACATGAAGGACGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAGAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAAAGAACCTTACACTCGTAGGCCTTGTTTTTCATTTTTTTCTTTTTTCTTTTTTTTTATGTCCTCTGCTTTCTTCCTTATTTTAGTCCTGCTTTTACGCTGTTCCCTTTTTGAACTTTAGCACCTCTCTCTTTGAAATTTGAATTGTAAAACAAAAGAAGTAATCGTGTGGGTCTCCCTCTGATTTTCGTTTTGGTTGGTGAATTCAAATAAAACTTGCAAGTAAAAGGCCAACGTATTAATTGATCATCCGTTATTTAATCACACATCAACATGCTCCAAAAGAGGCCGTTTGTTAATTTGTCCATCTCTGGACGTCACAAATTACAATACAACAGCTGTTGAAATTTCAACCTTAAACAAACATTATGTATATATTTATGATTAATAGCTTCTAATAACACTAAGATATACATAAACATTTACCGATTATACGTAATTTCTAGACATGGTTTACCAAAACTAACTAAGCTAGGCTAAGGCTAAAGGGTTTTCTCTTCTTCATCTTTATACATTTTGATTTGATTATCAAACATTGATACAAATGGGGTTGAAAGCATTATTATTGTTGTTATGATTATTTCTTGTTTGAGTATGGAACCTCCACGTGAAGAGGTAATCTCGAGACACGCAAGAAAGTTTGATAACATCGCAAAAGGCGGTGACAGAATTTTTCTTTCCGTCACTGTTTCCCCATTCAATCCTCACCCAACAAGAGAACCCATTTGAGGAATGAGGCACAGCCGCCGCATCGGAGAGGTGGAGCATCACTTCACCGCCGATTCTTCTGCCTTTGAGCCTTTCATCTCCGGTAACCATTGAATCGAGCCACAAGCACTCTGGTTGGCCAACCATTTCCTTATAAGCAGAATTCGCCATTCTCACTCTGTTATTCGAATCCGATATAACCGCTGGCAACACCTCGGATTCAACTTCCTTTTCCACTTCATCCGGTTTCTTCGGCAGCTGTGGAGTATTATTGGAGTGGACAGGGTTTTGAGCTTCGTTGATACACCCAACGCGAATGCTGGAACCAACAGGACGAACAGGGTGAGGAGTTATAACATTAGAAATAGAAACCGGGCATTGAAGTTGCTGCAATAAATCCTTCTCTTGAGGAATTTCAGAGACAACAGAACTATCAACACTGAATTCCACTCCCTTCTCTTCATCAAAAGACTTAATGAAATTAATCTCAGAAACAGGGGTGGTGGTTTCAGTTTCGTCAGAAACAGAAGGAAGAAGCGGAAGCGTGACAAGATTAGAATTAGAAGAGGAATCACGAAACCCAGAATTAATAGAAGGAAGAGAAAGATGAGGAAGTAAAGAAGAAGAAAAAGGATGATGGTGGAGGGAGAAATTAGGAGAAGGTGTAATTCTTGTTCGTTTTAAGGAGTGAGGGGAAATGGGTGGAGGACGAGATCTCTTACGAGTACGAGTGGGTCTAGCTTGTAACTGAGGCCATACATTTCGAAGAAAAGAGGAAGAGGAAGAAGAAGAGGAGGAATGGGGAATGTTGTTGAGAGAGTGATCAGAGGTGGGGAAAGGGGATTCGGGTTTGGGGGCAATGGGGCGGTATCTGGACATGATCTCCGCCGTCTTGTCGGTGGAGGGGAAAGGAGGGGGGAGAGTCTTGATCATGGCGGAGGTGGAAGGAGGGGGAGAGAGGGAGGGGAGGAAGAGGGAATGGAATGGAATAGGGGGGGAAGGGTTTAAGATGGAAGGGAAACGGTGGGGAGTGGCGAATAAGGGAAGGGCAAGAGAGTGACAGGTGGAAGAGGAATGTGGGGTACGTGGAAGAAAAAAGGACATGTGGGAAAGGGAGTGGGGCCATGCAAAAGCCAACGCATAACCAATCCAAAGTTAAGTTGAAGAGGAAGAGAGAGGAGTGGGAATGTGAATTCAATGGGCAGTGCCACCAATGAGAAGAGTGGAACGCGTGTGTGGTTGGCTCGCATGCGTTGATCCATCTATCACTATTGGTTTGGTAATTCAAATACAACAAATACAACAAATAACACAAATATAAATATAAATATTAAGCTCTCATCCTAACCATACTAATAAGAATGCATTGAATCAGCTCAGAAACAAACATTGGTGGTAGGAAAGAAGTAGAAGTTAGGAGGAGGAGTAGTAGTAGTAGTATATGTAAAGGTTGTTGATGGAGGAGAGGGGCACGTGTGAGGGGGGAGTTTGCATGCAAAGGGGATTGGAGGAATGGAGGGGGAGACGTGGCGGGAGGCGGTGTGGGGGCGTTGGAAAAGGAGCCTCATGTCGAGGGGTTAATTTAGATAGTAATTAGAATGTATATAGATAGGGGAAGGGGAATGGGAAGGGGAAGGGTATAAATGTAAAGGTCAAAAAAGAAAAGAAAAGAAAAAAAGAGCACGCAAAGCAATGCAGAAGAAACTGAAAGTGAAAACCCCTGGGTTGTTGTGTTGCGTTGTGTTAAACAATAATTTTGATTTGAGAGTGTGTTTTGTTTCTTCTTTATTATTCCCATTGGAGTTTGGGGACTCCCAGTTACGATTCTACCATTCATCTCTCTCTCTCTCTCTCTCTCTC

mRNA sequence

ATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTAGACAAACTTACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTCAAGTTAAGTAATTACAATTCGTTTGAAGGAGTGCTTTACTGTCGGCCACACTTTGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAGAGCTTTGAAGGAACACCAAAGATTGGAAAACCGGAGAAACCGGGTGATTCTGAGAAACCAACAGCGACTAAGGTTGCAAGTATGTTCGTCGGTACTAAAGATAAGTGTCTTGGATGTAACAAGACTGTTTATCCAACTGAGAAGGTTTCAGTAAATGGAACTTCGTACCATAAAAGCTGTTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCGAATTACATTGCACATGAAGGACGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAGAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAA

Coding sequence (CDS)

ATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTAGACAAACTTACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTCAAGTTAAGTAATTACAATTCGTTTGAAGGAGTGCTTTACTGTCGGCCACACTTTGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAGAGCTTTGAAGGAACACCAAAGATTGGAAAACCGGAGAAACCGGGTGATTCTGAGAAACCAACAGCGACTAAGGTTGCAAGTATGTTCGTCGGTACTAAAGATAAGTGTCTTGGATGTAACAAGACTGTTTATCCAACTGAGAAGGTTTCAGTAAATGGAACTTCGTACCATAAAAGCTGTTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCGAATTACATTGCACATGAAGGACGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAGAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAA

Protein sequence

MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Homology
[Close]
BLAST of CsaV3_4G035090 vs. NCBI nr
Match: XP_004141291.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN55277.1 hypothetical protein Csa_4G643070 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 2.9e-105
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 179

[Close]
BLAST of CsaV3_4G035090 vs. NCBI nr
Match: XP_008452649.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 3.8e-105
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMF+GTKDKCLGCNKTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFIGTKDKCLGCNKTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 179

[Close]
BLAST of CsaV3_4G035090 vs. NCBI nr
Match: XP_023536448.1 (LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 48  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 107

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKP DSE+PTATKVASMFVGTKDKCLGC  TVYPT
Sbjct: 108 HFDQLFKRTGSLDKSFEGTPKIGKPEKPADSERPTATKVASMFVGTKDKCLGCKNTVYPT 167

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 168 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 226

[Close]
BLAST of CsaV3_4G035090 vs. NCBI nr
Match: XP_022936105.1 (LIM domain-containing protein WLIM1 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 1.2e-101
Identity = 173/179 (96.65%), Postives = 174/179 (97.21%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKP DSE+PTATKVASMFVGTKDKCLGC  TVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPADSERPTATKVASMFVGTKDKCLGCKNTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGT YHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 121 EKVSVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 179

[Close]
BLAST of CsaV3_4G035090 vs. NCBI nr
Match: XP_022977103.1 (LIM domain-containing protein WLIM1-like [Cucurbita maxima])

HSP 1 Score: 377.5 bits (968), Expect = 2.6e-101
Identity = 173/179 (96.65%), Postives = 174/179 (97.21%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 47  MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 106

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKP DSE+PTATKVASMFVGTKDKCLGC  TVYPT
Sbjct: 107 HFDQLFKRTGSLDKSFEGTPKIGKPEKPADSERPTATKVASMFVGTKDKCLGCKNTVYPT 166

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHG CTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 167 EKVSVNGTSYHKSCFKCCHGRCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 225

[Close]
BLAST of CsaV3_4G035090 vs. TAIR10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 343.2 bits (879), Expect = 9.7e-95
Identity = 154/177 (87.01%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKIGKP++P + E+P  TKV++MF GT++KC+GC+KTVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG 178
           EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEG
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEG 177

[Close]
BLAST of CsaV3_4G035090 vs. TAIR10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 228.0 bits (580), Expect = 4.6e-60
Identity = 105/175 (60.00%), Postives = 126/175 (72.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HF+QLFK +GS  K+F+ +P     +KP      T +++A MF GT+DKC  C KTVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           EKV+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]
BLAST of CsaV3_4G035090 vs. TAIR10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-56
Identity = 95/175 (54.29%), Postives = 124/175 (70.86%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC ACDKTVY++D LT +   YHK+CFRC HC GTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HF+QLFK +G+  K+F+     GK EKP D    T +K++S F GT+DKC  C KTVYP 
Sbjct: 61  HFEQLFKESGNYSKNFQA----GKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPL 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           EKV++ G SYHK+CF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +
Sbjct: 121 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]
BLAST of CsaV3_4G035090 vs. TAIR10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-55
Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC  CDKTVY+VD L+ +   YHK+CFRC HC GTL++SNY+S +GVLYC+ 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TATKVASMFVGTKDKCLGCNKT 120
           HF+QLFK +G+  K+F+          PG +EKP    T +K++S+F GT+DKC  C KT
Sbjct: 61  HFEQLFKESGNFSKNFQ----------PGKTEKPELTRTPSKISSIFCGTQDKCAACEKT 120

Query: 121 VYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           VYP EK+ + G  +HK+CF+C HGGCT++ S+Y + +  LYC+HH  QL  EKGN + +
Sbjct: 121 VYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHV 169

[Close]
BLAST of CsaV3_4G035090 vs. TAIR10
Match: AT3G55770.7 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 205.3 bits (521), Expect = 3.2e-53
Identity = 103/213 (48.36%), Postives = 127/213 (59.62%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TATKVASMFVGTKDKCLGCNKT 120
           HF+QLFK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C+KT
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEK----------------------------------VSVNGTSYHKSCFKCCHGGC 176
           VYP EK                                  V+V   +YHKSCFKC HGGC
Sbjct: 121 VYPIEKIHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGC 180

[Close]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match: sp|Q94JX5|WLIM1_ARATH (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-93
Identity = 154/177 (87.01%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQ FKRTGSL+KSFEGTPKIGKP++P + E+P  TKV++MF GT++KC+GC+KTVYP 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG 178
           EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGNLSQLEG
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEG 177

[Close]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match: sp|P29675|SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.3e-77
Identity = 128/175 (73.14%), Postives = 148/175 (84.57%), Query Frame = 0 

Query: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPH 61
           +F GTTQKC  C+KTVYLVDKL A+ RVYHKACFRCHHCN TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 62  FDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPTE 121
           FDQLFKRTGSL+KSF+GTPK  KPE+    E  +A +++S F GT+DKC  C K VYP E
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIE 122

Query: 122 KVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLE 177
           +V V+GT+YH++CFKCCHGGCTISPSNYIAHEGRLYCKHHH QL K+KGN SQLE
Sbjct: 123 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match: sp|O04193|WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.2e-59
Identity = 105/175 (60.00%), Postives = 126/175 (72.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HF+QLFK +GS  K+F+ +P     +KP      T +++A MF GT+DKC  C KTVYP 
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           EKV+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match: sp|Q9M047|WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-57
Identity = 103/179 (57.54%), Postives = 127/179 (70.95%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKP----TATKVASMFVGTKDKCLGCNKT 120
           HF+QLFK +GS +K+F+       P K  D   P    T ++VA  F GT++KC  C+KT
Sbjct: 61  HFEQLFKESGSFNKNFQ------SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKT 120

Query: 121 VYPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           VYP EKV+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 VYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match: sp|O80839|PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-55
Identity = 95/175 (54.29%), Postives = 124/175 (70.86%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC ACDKTVY++D LT +   YHK+CFRC HC GTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HF+QLFK +G+  K+F+     GK EKP D    T +K++S F GT+DKC  C KTVYP 
Sbjct: 61  HFEQLFKESGNYSKNFQA----GKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPL 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 176
           EKV++ G SYHK+CF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +
Sbjct: 121 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match: tr|A0A0A0L3T9|A0A0A0L3T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643070 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.9e-105
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 179

[Close]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match: tr|A0A1S3BUC8|A0A1S3BUC8_CUCME (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103493607 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMF+GTKDKCLGCNKTVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFIGTKDKCLGCNKTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH
Sbjct: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 179

[Close]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match: tr|A0A1S3BBD7|A0A1S3BBD7_CUCME (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.8e-96
Identity = 163/179 (91.06%), Postives = 169/179 (94.41%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKI KPEKP DSEKPTA KVASMF GT+DKCLGC+ TVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKV+VNG  YHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHH QLIKEKGNLSQLEG H
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDH 179

[Close]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match: tr|A5BYE7|A5BYE7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g09040 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95
Identity = 163/179 (91.06%), Postives = 168/179 (93.85%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKL NYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQLFKRTGSLDKSFEGTPKI KPEKP DSEKP A KV+SMF GT+DKC+GC  TVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDSEKPIANKVSSMFAGTRDKCVGCKNTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKV+VNGT+YHKSCFKC HGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG H
Sbjct: 121 EKVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDH 179

[Close]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match: tr|A0A0A0LNS7|A0A0A0LNS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95
Identity = 162/179 (90.50%), Postives = 169/179 (94.41%), Query Frame = 0 

Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGTPKIGKPEKPGDSEKPTATKVASMFVGTKDKCLGCNKTVYPT 120
           HFDQ+FKRTGSLDKSFEGTPKI KPEKP DSE+PTA KVAS F GT+DKCLGC+ TVYPT
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSERPTANKVASKFGGTRDKCLGCDNTVYPT 120

Query: 121 EKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH 180
           EKV+VNGT YHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHH QLIKEKGNLSQLEG H
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDH 179

The following BLAST results are available for this feature:
BLAST of CsaV3_4G035090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141291.12.9e-105100.00PREDICTED: LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN55277.1 hyp... [more]
XP_008452649.13.8e-10599.44PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo][more]
XP_023536448.13.0e-10297.21LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo][more]
XP_022936105.11.2e-10196.65LIM domain-containing protein WLIM1 [Cucurbita moschata][more]
XP_022977103.12.6e-10196.65LIM domain-containing protein WLIM1-like [Cucurbita maxima][more]
BLAST of CsaV3_4G035090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10200.19.7e-9587.01GATA type zinc finger transcription factor family protein[more]
AT2G39900.14.6e-6060.00GATA type zinc finger transcription factor family protein[more]
AT2G45800.12.3e-5654.29GATA type zinc finger transcription factor family protein[more]
AT1G01780.12.6e-5550.84GATA type zinc finger transcription factor family protein[more]
AT3G55770.73.2e-5348.36GATA type zinc finger transcription factor family protein[more]
BLAST of CsaV3_4G035090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94JX5|WLIM1_ARATH1.8e-9387.01LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=... [more]
sp|P29675|SF3_HELAN2.3e-7773.14Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1[more]
sp|O04193|WLI2A_ARATH8.2e-5960.00LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P... [more]
sp|Q9M047|WLI2B_ARATH3.5e-5757.54LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P... [more]
sp|O80839|PLI2A_ARATH4.2e-5554.29LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P... [more]
BLAST of CsaV3_4G035090 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3T9|A0A0A0L3T9_CUCSA1.9e-105100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643070 PE=4 SV=1[more]
tr|A0A1S3BUC8|A0A1S3BUC8_CUCME2.5e-10599.44LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103493607 PE=4... [more]
tr|A0A1S3BBD7|A0A1S3BBD7_CUCME4.8e-9691.06LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4... [more]
tr|A5BYE7|A5BYE7_VITVI1.1e-9591.06Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g09040 PE=4 SV=... [more]
tr|A0A0A0LNS7|A0A0A0LNS7_CUCSA1.1e-9590.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0051015 actin filament binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003729 mRNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G035090.1CsaV3_4G035090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 109..161
e-value: 3.4E-13
score: 59.8
coord: 9..61
e-value: 3.2E-11
score: 53.3
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 110..164
e-value: 4.1E-12
score: 46.0
coord: 10..64
e-value: 1.9E-10
score: 40.7
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 10..44
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 8..68
score: 13.306
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 108..168
score: 12.692
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 104..174
e-value: 6.8E-19
score: 69.8
coord: 4..74
e-value: 4.2E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR24206FAMILY NOT NAMEDcoord: 1..179
NoneNo IPR availablePANTHERPTHR24206:SF35LIM DOMAIN-CONTAINING PROTEIN WLIM1coord: 1..179
NoneNo IPR availableCDDcd09441LIM2_SF3coord: 110..170
e-value: 2.50523E-36
score: 121.809
NoneNo IPR availableCDDcd09440LIM1_SF3coord: 6..68
e-value: 1.95908E-38
score: 127.196
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 3..35
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 36..76
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 136..175
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 102..135

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G035090CSPI04G24830Wild cucumber (PI 183967)cpicucB212
CsaV3_4G035090CSPI02G18480Wild cucumber (PI 183967)cpicucB103
CsaV3_4G035090CSPI07G06810Wild cucumber (PI 183967)cpicucB405
CsaV3_4G035090Cucsa.352860Cucumber (Gy14) v1cgycucB536
CsaV3_4G035090Cucsa.395580Cucumber (Gy14) v1cgycucB597
CsaV3_4G035090Cucsa.219100Cucumber (Gy14) v1cgycucB340
CsaV3_4G035090CmaCh01G017820Cucurbita maxima (Rimu)cmacucB0565
CsaV3_4G035090CmaCh05G001340Cucurbita maxima (Rimu)cmacucB0945
CsaV3_4G035090CmaCh09G002940Cucurbita maxima (Rimu)cmacucB0027
CsaV3_4G035090CmaCh11G016970Cucurbita maxima (Rimu)cmacucB0153
CsaV3_4G035090CmaCh12G006010Cucurbita maxima (Rimu)cmacucB0215
CsaV3_4G035090CmaCh19G005470Cucurbita maxima (Rimu)cmacucB0627
CsaV3_4G035090CmoCh19G005610Cucurbita moschata (Rifu)cmocucB0611
CsaV3_4G035090CmoCh09G002870Cucurbita moschata (Rifu)cmocucB0015
CsaV3_4G035090CmoCh11G014220Cucurbita moschata (Rifu)cmocucB0136
CsaV3_4G035090CmoCh12G005410Cucurbita moschata (Rifu)cmocucB0200
CsaV3_4G035090CmoCh01G018400Cucurbita moschata (Rifu)cmocucB0551
CsaV3_4G035090CmoCh05G001380Cucurbita moschata (Rifu)cmocucB0933
CsaV3_4G035090Cp4.1LG06g02100Cucurbita pepo (Zucchini)cpecucB0969
CsaV3_4G035090Cp4.1LG07g04900Cucurbita pepo (Zucchini)cpecucB1024
CsaV3_4G035090Cp4.1LG11g01190Cucurbita pepo (Zucchini)cpecucB0127
CsaV3_4G035090Cp4.1LG15g04410Cucurbita pepo (Zucchini)cpecucB0311
CsaV3_4G035090Cp4.1LG02g06520Cucurbita pepo (Zucchini)cpecucB0701
CsaV3_4G035090Cp4.1LG04g07610Cucurbita pepo (Zucchini)cpecucB0847
CsaV3_4G035090CsGy4G023130Cucumber (Gy14) v2cgybcucB171
CsaV3_4G035090CsGy7G006330Cucumber (Gy14) v2cgybcucB339
CsaV3_4G035090CsGy2G018380Cucumber (Gy14) v2cgybcucB081
CsaV3_4G035090Carg11889Silver-seed gourdcarcucB0211
CsaV3_4G035090Carg16389Silver-seed gourdcarcucB0488
CsaV3_4G035090Cla020598Watermelon (97103) v1cucwmB332
CsaV3_4G035090Cla022632Watermelon (97103) v1cucwmB310
CsaV3_4G035090MELO3C018524Melon (DHL92) v3.5.1cucmeB276
CsaV3_4G035090MELO3C010801Melon (DHL92) v3.5.1cucmeB287
CsaV3_4G035090MELO3C016823Melon (DHL92) v3.5.1cucmeB316
CsaV3_4G035090ClCG05G020650Watermelon (Charleston Gray)cucwcgB326
CsaV3_4G035090ClCG08G016530Watermelon (Charleston Gray)cucwcgB350
CsaV3_4G035090Lsi03G005830Bottle gourd (USVL1VR-Ls)cuclsiB300
CsaV3_4G035090Lsi04G014780Bottle gourd (USVL1VR-Ls)cuclsiB312
CsaV3_4G035090Lsi08G015320Bottle gourd (USVL1VR-Ls)cuclsiB336
CsaV3_4G035090MELO3C018524.2Melon (DHL92) v3.6.1cucmedB269
CsaV3_4G035090MELO3C016823.2Melon (DHL92) v3.6.1cucmedB308
CsaV3_4G035090MELO3C010801.2Melon (DHL92) v3.6.1cucmedB280
CsaV3_4G035090Cla97C08G160240Watermelon (97103) v2cucwmbB336
CsaV3_4G035090Cla97C02G033890Watermelon (97103) v2cucwmbB292
CsaV3_4G035090Cla97C05G102360Watermelon (97103) v2cucwmbB314
CsaV3_4G035090Bhi09G002655Wax gourdcucwgoB426
CsaV3_4G035090Bhi04G000400Wax gourdcucwgoB390
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_4G035090CsaV3_2G026080Cucumber (Chinese Long) v3cuccucB081
CsaV3_4G035090CsaV3_7G007780Cucumber (Chinese Long) v3cuccucB188
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G035090Cucumber (Chinese Long) v3cuccucB165
CsaV3_4G035090Cucumber (Chinese Long) v3cuccucB178
CsaV3_4G035090Silver-seed gourdcarcucB0002
CsaV3_4G035090Silver-seed gourdcarcucB0352
CsaV3_4G035090Silver-seed gourdcarcucB0410
CsaV3_4G035090Silver-seed gourdcarcucB0441
CsaV3_4G035090Silver-seed gourdcarcucB0810
CsaV3_4G035090Cucumber (Gy14) v2cgybcucB177
CsaV3_4G035090Cucumber (Gy14) v2cgybcucB284
CsaV3_4G035090Cucumber (Gy14) v1cgycucB124
CsaV3_4G035090Cucurbita maxima (Rimu)cmacucB0854
CsaV3_4G035090Cucurbita maxima (Rimu)cmacucB0800
CsaV3_4G035090Cucurbita maxima (Rimu)cmacucB1022
CsaV3_4G035090Cucurbita moschata (Rifu)cmocucB0391
CsaV3_4G035090Cucurbita moschata (Rifu)cmocucB0785
CsaV3_4G035090Cucurbita moschata (Rifu)cmocucB0839
CsaV3_4G035090Cucurbita moschata (Rifu)cmocucB1006
CsaV3_4G035090Cucurbita pepo (Zucchini)cpecucB0269
CsaV3_4G035090Cucurbita pepo (Zucchini)cpecucB0511
CsaV3_4G035090Cucurbita pepo (Zucchini)cpecucB0602
CsaV3_4G035090Wild cucumber (PI 183967)cpicucB224
CsaV3_4G035090Wild cucumber (PI 183967)cpicucB349
CsaV3_4G035090Bottle gourd (USVL1VR-Ls)cuclsiB283
CsaV3_4G035090Melon (DHL92) v3.5.1cucmeB310
CsaV3_4G035090Melon (DHL92) v3.5.1cucmeB330
CsaV3_4G035090Melon (DHL92) v3.6.1cucmedB303
CsaV3_4G035090Melon (DHL92) v3.6.1cucmedB325
CsaV3_4G035090Watermelon (Charleston Gray)cucwcgB287
CsaV3_4G035090Watermelon (Charleston Gray)cucwcgB296
CsaV3_4G035090Watermelon (97103) v1cucwmB309
CsaV3_4G035090Watermelon (97103) v1cucwmB340
CsaV3_4G035090Watermelon (97103) v2cucwmbB267
CsaV3_4G035090Watermelon (97103) v2cucwmbB280
CsaV3_4G035090Wax gourdcucwgoB401