CsaV3_4G034260 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G034260
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCalcium-binding EF-hand family protein, putative
Locationchr4 : 24273050 .. 24274404 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAAAACCAAGTCCAACAAATATTCGAAAGAGATAGAAGAAAATTCAAATTCAATGCCAATCCAAATACCAAAATGCTCCCCTAACTTTTTAGGGCCAAATATTGAAAAGGCAGCGTCAAAGCCGAAGGAAATGAGCAATAAATAGCAGTTTTGCCCTTCAACACTTTCTTCAACTCAAACAACATATTTCTTCAACCTCCTCCTCATCATCATCCCGTAAACTTATAATAATAATAATAATAATAATAATAATAAAAAGAAAATTCCATGGCTTTGAGTTTCGTCTTCAGCAACGGCGTTAGCGACTACAAGCGATGTCCTGTTCCTTTCTCCAGAGATCAGCTTCGTGATATTTTCCTCAAGCACGACGGCGACGGCGATGGCCGTCTTTCACGTCTGGAGTTGAAATCGGCCTTTGAATCCTTAGGGTCTAATTGGAGCCGTTTCAGAGCTCGCCAGTCACTCAAAGCCGCGGATGCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGAATACGCTATTATTTGAATCCTTCGTCTTAGTTCTTTGTTTTGTCATATTGTAAACTATTTGTATTACCACAACTAAGTGAAGTCTATGCTTCTTATTTCTTCTCGAGATCGGAGTTTCAAATCTTTCCGTTCCCCCCGCCGCGAGTTCGCCACTTGTTGTAGTTTGAAGTCTACATGTATTATATACTCAAAATAAATTTCAATAACTGCCCTTCACCTTCTATTATTTCCTTTTTTTATCTTTTATACTTTCAAGCTTTTTGCTTGATCTTAGATGAGACCAACTTTTTTATCTTTTATATTCGATGGGGCAATTTACATGCCCTAATTGAGCTGATTAACAATAAAATTACTACTTTAAACGGATGGATGATTACGTTTGTGTTTTGTAATCATTTTCAATTTTGTATTATCAAATTAAAGAACTTATAGTTCACTGCAAGAAATTGGAATTTTTCCGATGCACAAAAACTTGTTTGGAAATGTCGGAAAAAAGAGTACCTAATGGTGTATATCCCGACGTATTCATCCAACGTCGGGAGTTATCCTTCTATTAAATCCTTTAGTTTTACATAATTGAAAGAGAAAAGAGAAAGAAAAAATGAGAGAGAGGGAGACCGAGAAGAAGAAGAGGAGATCTCACCTCTACTGTAGGGTTTTTTTATATTAGTTTGATGTAATTTATTTTTATTTAGATTAGAAATTATGTTTTGAATTAGAAATTTGGTTTTTGAATTAGTTTTTGTGTGAGGAATAGGATTTTGAATTATGTTTTAGGAATAATATTATGTTTTATGAGGGGAT

mRNA sequence

ATGGCTTTGAGTTTCGTCTTCAGCAACGGCGTTAGCGACTACAAGCGATGTCCTGTTCCTTTCTCCAGAGATCAGCTTCGTGATATTTTCCTCAAGCACGACGGCGACGGCGATGGCCGTCTTTCACGTCTGGAGTTGAAATCGGCCTTTGAATCCTTAGGGTCTAATTGGAGCCGTTTCAGAGCTCGCCAGTCACTCAAAGCCGCGGATGCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGAATACGCTATTATTTGA

Coding sequence (CDS)

ATGGCTTTGAGTTTCGTCTTCAGCAACGGCGTTAGCGACTACAAGCGATGTCCTGTTCCTTTCTCCAGAGATCAGCTTCGTGATATTTTCCTCAAGCACGACGGCGACGGCGATGGCCGTCTTTCACGTCTGGAGTTGAAATCGGCCTTTGAATCCTTAGGGTCTAATTGGAGCCGTTTCAGAGCTCGCCAGTCACTCAAAGCCGCGGATGCCGACGGCGATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTGTAAGATGCGAATACGCTATTATTTGA

Protein sequence

MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII
Homology
[Close]
BLAST of CsaV3_4G034260 vs. NCBI nr
Match: KGN55186.1 (hypothetical protein Csa_4G639740 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60
          MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF
Sbjct: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60

Query: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 98
          RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]
BLAST of CsaV3_4G034260 vs. NCBI nr
Match: KGN62511.1 (hypothetical protein Csa_2G357340 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 6.9e-16
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 14 YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADG 73
          YKR  VPFS +QL ++F  HD DGDG L++ ELK AFE LGS +  FR  ++L+AAD +G
Sbjct: 9  YKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNG 68

Query: 74 DGYVTLDELDRLLDYAVRCEYAI 97
          DG +++DE+ +L+ YA   +Y I
Sbjct: 69 DGVISMDEMGKLIKYAKTRKYTI 91

[Close]
BLAST of CsaV3_4G034260 vs. NCBI nr
Match: POF10332.1 (calcium-binding allergen ole e 8 [Quercus suber])

HSP 1 Score: 90.5 bits (223), Expect = 3.4e-15
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 14 YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADG 73
          YK   V +++DQL ++F  HD DGDG+LSR ELK AF+ LGS W  +R  Q+L+  D + 
Sbjct: 8  YKPTSVLYTKDQLMNVFKSHDADGDGKLSREELKKAFKYLGSRWCSYRTEQALRCTDTND 67

Query: 74 DGYVTLDELDRLLDYAVRCEYAII 98
          DGY+   EL++L+DY +  +Y I+
Sbjct: 68 DGYIDEKELEKLVDYTLERQYTIV 91

[Close]
BLAST of CsaV3_4G034260 vs. NCBI nr
Match: XP_021299254.1 (probable calcium-binding protein CML10 [Herrania umbratica])

HSP 1 Score: 89.0 bits (219), Expect = 9.9e-15
Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 0 

Query: 6   VFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQS 65
           V  NG S  K  P+P S++QL+++F + D + DGRLS+ ELK AF  LGS    FR   +
Sbjct: 13  VGGNGTSKPKHAPLPLSKEQLKEVFRRSDSNKDGRLSKEELKKAFNELGSRVPVFRTLAA 72

Query: 66  LKAADADGDGYVTLDELDRLLDYAVRCEYA 96
           L  AD +GDGYV+ DELD ++ YAV   YA
Sbjct: 73  LHHADENGDGYVSEDELDAVVQYAVGLRYA 102

[Close]
BLAST of CsaV3_4G034260 vs. NCBI nr
Match: EOY02751.1 (Calcium-binding EF-hand family protein, putative [Theobroma cacao])

HSP 1 Score: 86.3 bits (212), Expect = 6.4e-14
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 10  GVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAA 69
           G S+ K  P  F+  QL  +F + DG+ DGRLSR EL+SAF SLGS +  +RA  +L  A
Sbjct: 41  GTSNTKLSPPFFTEAQLTSVFRRFDGNRDGRLSRQELRSAFNSLGSRFPTYRAFAALHQA 100

Query: 70  DADGDGYVTLDELDRLLDYAVRCEYAI 97
           D +GDGY++ DE+D L+ YA+ C Y +
Sbjct: 101 DQNGDGYISEDEMDDLIHYALSCGYHV 127

[Close]
BLAST of CsaV3_4G034260 vs. TAIR10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 24 DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELD 83
          ++L+ +F + D +GDG++S LEL   F+++G++++     + L+  D D DGY+ LDE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 84 RL 86
           L
Sbjct: 82 TL 83

[Close]
BLAST of CsaV3_4G034260 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 48.5 bits (114), Expect = 2.7e-06
Identity = 22/65 (33.85%), Postives = 38/65 (58.46%), Query Frame = 0 

Query: 22  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE 81
           S+++LR +F   D DGDG++S  EL+  F S+G   S   A++++   D D DG +  ++
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 82  LDRLL 87
              L+
Sbjct: 121 FVGLM 125

[Close]
BLAST of CsaV3_4G034260 vs. TAIR10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-05
Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 0 

Query: 26 LRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL 85
          L  +F   D + DGR+S  ELK +F++LG   S   A  ++K +D DGDG + ++E   L
Sbjct: 23 LEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALL 82

Query: 86 L 87
          +
Sbjct: 83 I 83

[Close]
BLAST of CsaV3_4G034260 vs. TAIR10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 7   FSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSL 66
           F   +  YKR     S D +R+ F   D +GDG++S  E+ S    LG   S     + +
Sbjct: 104 FREFIDAYKRSGGIRSSD-IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMV 163

Query: 67  KAADADGDGYVTLDELDRLL 87
           +A DADGDG V ++E  +++
Sbjct: 164 RAVDADGDGLVNMEEFIKMM 182

[Close]
BLAST of CsaV3_4G034260 vs. TAIR10
Match: AT1G18530.1 (EF hand calcium-binding protein family)

HSP 1 Score: 45.1 bits (105), Expect = 3.0e-05
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 25 QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDEL 83
          QL+DIF + D D DG L+ LEL +   SLG   S  +    L + D++G+G+V  DEL
Sbjct: 7  QLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFDEL 64

[Close]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match: sp|Q9LE22|CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-06
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 24 DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELD 83
          ++L+ +F + D +GDG++S LEL   F+++G++++     + L+  D D DGY+ LDE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 84 RL 86
           L
Sbjct: 82 TL 83

[Close]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match: sp|Q0DZP5|CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0 

Query: 25 QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDR 84
          +LR +F   D DGDGR++R EL  + E LG    R     ++   DA+GDG V +DE  +
Sbjct: 8  ELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQ 67

Query: 85 LLDYAVRCE 94
          L +  +R +
Sbjct: 68 LYETVMRVD 76

[Close]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match: sp|Q8L3R2|CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 22/65 (33.85%), Postives = 38/65 (58.46%), Query Frame = 0 

Query: 22  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE 81
           S+++LR +F   D DGDG++S  EL+  F S+G   S   A++++   D D DG +  ++
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 82  LDRLL 87
              L+
Sbjct: 121 FVGLM 125

[Close]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match: sp|Q9S744|CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 0 

Query: 24  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELD 83
           D+L ++F   D DGDG +S+LEL    + +G   +   A   ++ AD DGDG+++  E  
Sbjct: 84  DELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFS 143

Query: 84  RLL 87
           +++
Sbjct: 144 KMM 146

[Close]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match: sp|Q0DJV6|CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 22/65 (33.85%), Postives = 35/65 (53.85%), Query Frame = 0 

Query: 22  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE 81
           S  +LR+ F  +D D +G++S  EL      LG   S     + +++ DADGDG V  DE
Sbjct: 87  SEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDE 146

Query: 82  LDRLL 87
             +++
Sbjct: 147 FKKMM 151

[Close]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match: tr|A0A0A0L4V0|A0A0A0L4V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60
          MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF
Sbjct: 1  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRF 60

Query: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 98
          RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII
Sbjct: 61 RARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match: tr|A0A0A0LRB6|A0A0A0LRB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.5e-16
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 14 YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADG 73
          YKR  VPFS +QL ++F  HD DGDG L++ ELK AFE LGS +  FR  ++L+AAD +G
Sbjct: 9  YKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNG 68

Query: 74 DGYVTLDELDRLLDYAVRCEYAI 97
          DG +++DE+ +L+ YA   +Y I
Sbjct: 69 DGVISMDEMGKLIKYAKTRKYTI 91

[Close]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match: tr|A0A2P4LY04|A0A2P4LY04_QUESU (Calcium-binding allergen ole e 8 OS=Quercus suber OX=58331 GN=CFP56_50060 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-15
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 14 YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADG 73
          YK   V +++DQL ++F  HD DGDG+LSR ELK AF+ LGS W  +R  Q+L+  D + 
Sbjct: 8  YKPTSVLYTKDQLMNVFKSHDADGDGKLSREELKKAFKYLGSRWCSYRTEQALRCTDTND 67

Query: 74 DGYVTLDELDRLLDYAVRCEYAII 98
          DGY+   EL++L+DY +  +Y I+
Sbjct: 68 DGYIDEKELEKLVDYTLERQYTIV 91

[Close]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match: tr|A0A061ECW3|A0A061ECW3_THECC (Calcium-binding EF-hand family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_017146 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.3e-14
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 10  GVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAA 69
           G S+ K  P  F+  QL  +F + DG+ DGRLSR EL+SAF SLGS +  +RA  +L  A
Sbjct: 41  GTSNTKLSPPFFTEAQLTSVFRRFDGNRDGRLSRQELRSAFNSLGSRFPTYRAFAALHQA 100

Query: 70  DADGDGYVTLDELDRLLDYAVRCEYAI 97
           D +GDGY++ DE+D L+ YA+ C Y +
Sbjct: 101 DQNGDGYISEDEMDDLIHYALSCGYHV 127

[Close]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match: tr|A0A2P6Q0F9|A0A2P6Q0F9_ROSCH (Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0307841 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-14
Identity = 38/84 (45.24%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 15  KRCPVP-FSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADG 74
           K+ P+   S++Q+ D F + DG+GDG+L + E+K+AF  LGS WS +RAR++L  AD++G
Sbjct: 35  KKVPIHCISKEQVCDFFKRFDGNGDGKLCKEEIKAAFRKLGSRWSSYRARRALDHADSNG 94

Query: 75  DGYVTLDELDRLLDYAVRCEYAII 98
           DG ++ +ELD L++YA+ C Y ++
Sbjct: 95  DGIISNEELDDLINYALDCGYKLL 118

The following BLAST results are available for this feature:
BLAST of CsaV3_4G034260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55186.14.0e-48100.00hypothetical protein Csa_4G639740 [Cucumis sativus][more]
KGN62511.16.9e-1650.60hypothetical protein Csa_2G357340 [Cucumis sativus][more]
POF10332.13.4e-1546.43calcium-binding allergen ole e 8 [Quercus suber][more]
XP_021299254.19.9e-1548.89probable calcium-binding protein CML10 [Herrania umbratica][more]
EOY02751.16.4e-1448.28Calcium-binding EF-hand family protein, putative [Theobroma cacao][more]
BLAST of CsaV3_4G034260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18210.11.4e-0735.48Calcium-binding EF-hand family protein[more]
AT3G50770.12.7e-0633.85calmodulin-like 41[more]
AT1G76640.11.3e-0537.70Calcium-binding EF-hand family protein[more]
AT2G15680.11.7e-0533.75Calcium-binding EF-hand family protein[more]
AT1G18530.13.0e-0543.10EF hand calcium-binding protein family[more]
BLAST of CsaV3_4G034260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LE22|CML27_ARATH2.6e-0635.48Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ... [more]
sp|Q0DZP5|CML17_ORYSJ1.7e-0537.68Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q8L3R2|CML41_ARATH4.9e-0533.85Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ... [more]
sp|Q9S744|CML9_ARATH6.3e-0533.33Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1[more]
sp|Q0DJV6|CML18_ORYSJ1.1e-0433.85Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of CsaV3_4G034260 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4V0|A0A0A0L4V0_CUCSA2.6e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1[more]
tr|A0A0A0LRB6|A0A0A0LRB6_CUCSA4.5e-1650.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1[more]
tr|A0A2P4LY04|A0A2P4LY04_QUESU2.3e-1546.43Calcium-binding allergen ole e 8 OS=Quercus suber OX=58331 GN=CFP56_50060 PE=4 S... [more]
tr|A0A061ECW3|A0A061ECW3_THECC4.3e-1448.28Calcium-binding EF-hand family protein, putative OS=Theobroma cacao OX=3641 GN=T... [more]
tr|A0A2P6Q0F9|A0A2P6Q0F9_ROSCH5.6e-1445.24Putative EF-hand domain pair protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G034260.1CsaV3_4G034260.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 61..89
e-value: 4.1
score: 12.8
coord: 25..53
e-value: 0.062
score: 22.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 24..82
e-value: 1.8E-9
score: 37.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 21..56
score: 13.481
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 57..92
score: 9.715
IPR002048EF-hand domainCDDcd00051EFhcoord: 25..86
e-value: 5.11377E-12
score: 55.2465
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 10..89
e-value: 1.3E-14
score: 56.5
NoneNo IPR availablePANTHERPTHR44455FAMILY NOT NAMEDcoord: 21..91
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 34..46
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 70..82
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 23..85

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G034260Cucsa.123710Cucumber (Gy14) v1cgycucB167
CsaV3_4G034260CmaCh09G002210Cucurbita maxima (Rimu)cmacucB0027
CsaV3_4G034260CmoCh01G019050Cucurbita moschata (Rifu)cmocucB0551
CsaV3_4G034260CmoCh09G002140Cucurbita moschata (Rifu)cmocucB0015
CsaV3_4G034260Cp4.1LG02g07030Cucurbita pepo (Zucchini)cpecucB0701
CsaV3_4G034260Cp4.1LG06g01580Cucurbita pepo (Zucchini)cpecucB0969
CsaV3_4G034260Cp4.1LG07g05370Cucurbita pepo (Zucchini)cpecucB1025
CsaV3_4G034260CsGy4G022320Cucumber (Gy14) v2cgybcucB171
CsaV3_4G034260MELO3C010865Melon (DHL92) v3.5.1cucmeB287
CsaV3_4G034260Lsi04G015700Bottle gourd (USVL1VR-Ls)cuclsiB312
CsaV3_4G034260Lsi08G014670Bottle gourd (USVL1VR-Ls)cuclsiB336
CsaV3_4G034260MELO3C010865.2Melon (DHL92) v3.6.1cucmedB280
CsaV3_4G034260Cla97C05G101430Watermelon (97103) v2cucwmbB314
CsaV3_4G034260Cla97C08G159390Watermelon (97103) v2cucwmbB336
CsaV3_4G034260Bhi04G000313Wax gourdcucwgoB390
CsaV3_4G034260Bhi09G002738Wax gourdcucwgoB426
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_4G034260CsaV3_2G027950Cucumber (Chinese Long) v3cuccucB081
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G034260Cucumber (Chinese Long) v3cuccucB188
CsaV3_4G034260Silver-seed gourdcarcucB0121
CsaV3_4G034260Silver-seed gourdcarcucB0211
CsaV3_4G034260Silver-seed gourdcarcucB0810
CsaV3_4G034260Cucumber (Gy14) v2cgybcucB081
CsaV3_4G034260Cucumber (Gy14) v2cgybcucB339
CsaV3_4G034260Cucumber (Gy14) v1cgycucB340
CsaV3_4G034260Cucumber (Gy14) v1cgycucB349
CsaV3_4G034260Cucurbita maxima (Rimu)cmacucB0153
CsaV3_4G034260Cucurbita maxima (Rimu)cmacucB0215
CsaV3_4G034260Cucurbita maxima (Rimu)cmacucB0565
CsaV3_4G034260Cucurbita maxima (Rimu)cmacucB0627
CsaV3_4G034260Cucurbita maxima (Rimu)cmacucB0945
CsaV3_4G034260Cucurbita moschata (Rifu)cmocucB0136
CsaV3_4G034260Cucurbita moschata (Rifu)cmocucB0200
CsaV3_4G034260Cucurbita moschata (Rifu)cmocucB0611
CsaV3_4G034260Cucurbita moschata (Rifu)cmocucB0933
CsaV3_4G034260Cucurbita pepo (Zucchini)cpecucB0127
CsaV3_4G034260Cucurbita pepo (Zucchini)cpecucB0311
CsaV3_4G034260Wild cucumber (PI 183967)cpicucB103
CsaV3_4G034260Wild cucumber (PI 183967)cpicucB212
CsaV3_4G034260Wild cucumber (PI 183967)cpicucB405
CsaV3_4G034260Melon (DHL92) v3.5.1cucmeB276
CsaV3_4G034260Melon (DHL92) v3.5.1cucmeB316
CsaV3_4G034260Melon (DHL92) v3.6.1cucmedB269
CsaV3_4G034260Melon (DHL92) v3.6.1cucmedB308
CsaV3_4G034260Watermelon (Charleston Gray)cucwcgB304
CsaV3_4G034260Watermelon (Charleston Gray)cucwcgB326
CsaV3_4G034260Watermelon (Charleston Gray)cucwcgB350
CsaV3_4G034260Watermelon (97103) v1cucwmB310
CsaV3_4G034260Watermelon (97103) v1cucwmB332
CsaV3_4G034260Watermelon (97103) v1cucwmB363
CsaV3_4G034260Watermelon (97103) v2cucwmbB291