CsaV3_4G033470 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G033470
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionethylene-responsive transcription factor 4
Locationchr4 : 23698717 .. 23699701 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCGGAGACCGCTCCACATCCACCACGCCTCCCACTTCCAAAGAGATCCGCTACAGAGGCGTCAGAAAGAGGCCGTGGGGTCGCTACGCTGCCGAAATCCGAGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAATACGGCAGAAGAAGCGGCGCGTGCTTATGACGCGGCTGCGCGTGAATTTAGAGGCGCAAATGCCAAAACTAATTTCCCTCTTCAAACCGATTTCCTTATCGTTGATAACAATAACCACAGCAACTTCCATAAATCCGCTTGCAGTACTAGTCCCAGCCACAGCAGCACCGTCGAGTCCTCTTCCCCATCCCCAACGCCGTCGGATCCTTACCTCGACGGAGGCATCCACCCGCCAGGCATTTCCCCTCCAATTTTCTTCTTCGACGCGTTTGCTCAGGCGGAAAAGAATATCAGTGACTTTCGTCGGACCGTTACCGCCGCCGTCGCCGGTGCAAGCGACTCCGATTCGTCATCTGTAGGTGATTTCGACACTACGCGAAAATCCCGGCCGTTGGATTTTGACCTCAATCTTCCAGCTGTGGAAGTTGTCTGAGGATCCGTGTCTTTTTTTTTTTTCTTTTCATTTTGAATATGAACTAATTTTTCTAATTTAATATCCGTAAAATCCATTTCAAGGATTGAATGAAATATTCGACCAGAATGAGATTAAAAAATATATATTAGAAGGTGTATTATTGTATAGATATCAAAGAATTTCTCCGATTTGAATTTTATTAATTTTGGAATTCAATTTAAATTTCTTTGTATTTTCTCGGAAACAAAGCAGGATATTAAATTAAAACTAAATAGAACGACACGTAGGAGAGAGAGAGCAGATCTGGAATAAGGGCACGGATAACAAGAGAGCCGACCTGTCGTTTCGTTTTATTTATTTATAGGTTAGCGTATGTTATCGCGTCGGCCGTAGTGGGGGCGGCGGCGGGCCCAGAAATTAA

mRNA sequence

ATGGCTGCCGGAGACCGCTCCACATCCACCACGCCTCCCACTTCCAAAGAGATCCGCTACAGAGGCGTCAGAAAGAGGCCGTGGGGTCGCTACGCTGCCGAAATCCGAGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAATACGGCAGAAGAAGCGGCGCGTGCTTATGACGCGGCTGCGCGTGAATTTAGAGGCGCAAATGCCAAAACTAATTTCCCTCTTCAAACCGATTTCCTTATCGTTGATAACAATAACCACAGCAACTTCCATAAATCCGCTTGCAGTACTAGTCCCAGCCACAGCAGCACCGTCGAGTCCTCTTCCCCATCCCCAACGCCGTCGGATCCTTACCTCGACGGAGGCATCCACCCGCCAGGCATTTCCCCTCCAATTTTCTTCTTCGACGCGTTTGCTCAGGCGGAAAAGAATATCAGTGACTTTCGTCGGACCGTTACCGCCGCCGTCGCCGGTGCAAGCGACTCCGATTCGTCATCTGTAGGTGATTTCGACACTACGCGAAAATCCCGGCCGTTGGATTTTGACCTCAATCTTCCAGCTGTGGAAGTTAGCGTATGTTATCGCGTCGGCCGTAGTGGGGGCGGCGGCGGGCCCAGAAATTAA

Coding sequence (CDS)

ATGGCTGCCGGAGACCGCTCCACATCCACCACGCCTCCCACTTCCAAAGAGATCCGCTACAGAGGCGTCAGAAAGAGGCCGTGGGGTCGCTACGCTGCCGAAATCCGAGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAATACGGCAGAAGAAGCGGCGCGTGCTTATGACGCGGCTGCGCGTGAATTTAGAGGCGCAAATGCCAAAACTAATTTCCCTCTTCAAACCGATTTCCTTATCGTTGATAACAATAACCACAGCAACTTCCATAAATCCGCTTGCAGTACTAGTCCCAGCCACAGCAGCACCGTCGAGTCCTCTTCCCCATCCCCAACGCCGTCGGATCCTTACCTCGACGGAGGCATCCACCCGCCAGGCATTTCCCCTCCAATTTTCTTCTTCGACGCGTTTGCTCAGGCGGAAAAGAATATCAGTGACTTTCGTCGGACCGTTACCGCCGCCGTCGCCGGTGCAAGCGACTCCGATTCGTCATCTGTAGGTGATTTCGACACTACGCGAAAATCCCGGCCGTTGGATTTTGACCTCAATCTTCCAGCTGTGGAAGTTAGCGTATGTTATCGCGTCGGCCGTAGTGGGGGCGGCGGCGGGCCCAGAAATTAA

Protein sequence

MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRPLDFDLNLPAVEVSVCYRVGRSGGGGGPRN
Homology
[Close]
BLAST of CsaV3_4G033470 vs. NCBI nr
Match: XP_004146050.1 (PREDICTED: ethylene-responsive transcription factor 4 [Cucumis sativus] >KGN55106.1 Ethylene response factor 2 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 1.0e-101
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120
           AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY
Sbjct: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120

Query: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180
           LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP
Sbjct: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180

Query: 181 LDFDLNLPAVEV 193
           LDFDLNLPAVEV
Sbjct: 181 LDFDLNLPAVEV 192

[Close]
BLAST of CsaV3_4G033470 vs. NCBI nr
Match: XP_008463800.1 (PREDICTED: ethylene-responsive transcription factor 4 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 6.9e-82
Identity = 165/192 (85.94%), Postives = 169/192 (88.02%), Query Frame = 0 

Query: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTS  PP SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120
            AAREFRGANAKTNFP+Q DFLIVD NNH+NFHKSACS+SPSHSSTVESSSPSPTPS+PY
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVD-NNHTNFHKSACSSSPSHSSTVESSSPSPTPSNPY 120

Query: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180
           LDGGIH PGIS PIFFFDAFAQAEK ISDFRRTVT             V DFDTTRKSRP
Sbjct: 121 LDGGIHAPGISRPIFFFDAFAQAEK-ISDFRRTVTXXXXXXXXXXXXXVVDFDTTRKSRP 180

Query: 181 LDFDLNLPAVEV 193
           LDFDLNLPAVEV
Sbjct: 181 LDFDLNLPAVEV 190

[Close]
BLAST of CsaV3_4G033470 vs. NCBI nr
Match: XP_022935731.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 3.3e-68
Identity = 152/196 (77.55%), Postives = 158/196 (80.61%), Query Frame = 0 

Query: 1   MAAGDRSTSTT----PPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGD+STST        SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60

Query: 61  RAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTP 120
           RAYD AAREFRGA+AKTNFP+   FL VDNNN  NF KSACS SPS  STVES+SPSP P
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNN--NFRKSACS-SPSQCSTVESTSPSPAP 120

Query: 121 SDPYLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTR 180
           SDP +   +H P IS PIFFFDAFAQ EKN SDFRR VT A    SDSDSSSV DFD TR
Sbjct: 121 SDPTIT-DVHAPAISRPIFFFDAFAQVEKN-SDFRRIVTGAGGSRSDSDSSSVVDFDRTR 180

Query: 181 KSRPLDFDLNLPAVEV 193
           KSRPLDFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 191

[Close]
BLAST of CsaV3_4G033470 vs. NCBI nr
Match: XP_023536061.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 146/196 (74.49%), Postives = 152/196 (77.55%), Query Frame = 0 

Query: 1   MAAGDRSTST----TPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGD+STST        SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDKSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTP 120
           RAYD AAREFRGA+AKTNFP+   FL VDNNN  NF KSACS SPS SSTV         
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNN--NFRKSACS-SPSQSSTVXXXXXXXXX 120

Query: 121 SDPYLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTR 180
           SDP +   +H P IS PIFFF+AFAQ EKN SDFRR VT A    SDSDSSSV DFD TR
Sbjct: 121 SDPAIT-HVHAPAISRPIFFFEAFAQVEKN-SDFRRIVTGAGGSRSDSDSSSVVDFDRTR 180

Query: 181 KSRPLDFDLNLPAVEV 193
           KSRPLDFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 191

[Close]
BLAST of CsaV3_4G033470 vs. NCBI nr
Match: XP_022976583.1 (ethylene-responsive transcription factor 4-like [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 145/196 (73.98%), Postives = 152/196 (77.55%), Query Frame = 0 

Query: 1   MAAGDRSTST----TPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAA DRSTST        S+EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAANDRSTSTVSAAVASNSEEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTP 120
           RAYD AAREFRGA+AKTNFP+  DF I+D NN  NF KSACS +PS  STVESSSPSP P
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNDFQIIDINN--NFRKSACS-NPSQCSTVESSSPSPAP 120

Query: 121 SDPYLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTR 180
            DP L   +H P IS PIFFFDAFAQ EKN SDFRR V+ A    S     SV DFD TR
Sbjct: 121 LDPALT-YVHAPSISRPIFFFDAFAQVEKN-SDFRRIVSVAGRSRSXXXXXSVVDFDRTR 180

Query: 181 KSRPLDFDLNLPAVEV 193
           KSRPLDFDLNLPAVEV
Sbjct: 181 KSRPLDFDLNLPAVEV 191

[Close]
BLAST of CsaV3_4G033470 vs. TAIR10
Match: AT3G15210.1 (ethylene responsive element binding factor 4)

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-34
Identity = 105/213 (49.30%), Postives = 123/213 (57.75%), Query Frame = 0 

Query: 7   STSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREF 66
           +T+ T   +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD AAR+F
Sbjct: 12  TTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDF 71

Query: 67  RGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIH 126
           RGA AKTNFP  T   + D    + F     + SPS SST++ +SP PT   P    G  
Sbjct: 72  RGAKAKTNFP--TFLELSDQKVPTGF-----ARSPSQSSTLDCASP-PTLVVPSATAGNV 131

Query: 127 PPGI-----------------SPPIFFFDAF-------AQAEKNISDFRRTV----TAAV 186
           PP +                 S P++F D          Q     S FR  V    T   
Sbjct: 132 PPQLELSLGGXXXXSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMA 191

Query: 187 AGA-SDSDSSSVGDFD--TTRKSRPLDFDLNLP 189
            GA SDSDSSSV DF+    ++S+ LD DLNLP
Sbjct: 192 CGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

[Close]
BLAST of CsaV3_4G033470 vs. TAIR10
Match: AT1G53170.1 (ethylene response factor 8)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 82/183 (44.81%), Postives = 111/183 (60.66%), Query Frame = 0 

Query: 15  SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTN 74
           +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYDAAAR+FRG  AKTN
Sbjct: 26  AKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTN 85

Query: 75  FPLQTDFLIVDNNNHSNFHKSACSTSPSHSST-VESSSPSPTPSDPYLDGGIHPPG---- 134
           F +                     +SP+ SST V+S + +   + P+L+  +   G    
Sbjct: 86  FGV------------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRR 145

Query: 135 ---ISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFD--TTRKSRPLDFD 188
              +  P++++        N++ + +  T  V   S+S++SSV DF+    + S PLD D
Sbjct: 146 KIPLVHPVYYY--------NMATYPKMTTCGV--QSESETSSVVDFEGGAGKISPPLDLD 180

[Close]
BLAST of CsaV3_4G033470 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 0 

Query: 4   GDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAA 63
           G   T T     KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD AA
Sbjct: 17  GGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAA 76

Query: 64  REFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDG 123
           REFRG+ AKTNFPL  +   V++   ++ + +  + + +   T     P     +  + G
Sbjct: 77  REFRGSKAKTNFPLPGESTTVNDGGENDSYVNRTTVTTAREMT-RQRFPFACHRERKVVG 136

Query: 124 GIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRPLDF 183
           G    G     FFFD  ++A    ++  R         +   S  + +       R L+ 
Sbjct: 137 GYASAG-----FFFDP-SRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRELNL 196

Query: 184 DLNL--PAVEV 193
           DLNL  P V+V
Sbjct: 197 DLNLAPPVVDV 200

[Close]
BLAST of CsaV3_4G033470 vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24
Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 0 

Query: 18  IRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTNFPL 77
           +RYRGVRKRPWGRYAAEIRDP KK+RVWLGTF+T EEAARAYD  A EFRGA AKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 78  QTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPS 114
                      + N H  + + S S SSTVESS P+
Sbjct: 78  Y----------NINAHCLSLTQSLSQSSTVESSFPN 103

[Close]
BLAST of CsaV3_4G033470 vs. TAIR10
Match: AT1G50640.1 (ethylene responsive element binding factor 3)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 3  AGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAA 62
          AG    +    + KEIR+RGVRKRPWGR+AAEIRDP KK RVWLGTF++AEEAARAYD+A
Sbjct: 11 AGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSA 70

Query: 63 AREFRGANAKTNFPLQT 80
          AR  RG  AKTNFP+ +
Sbjct: 71 ARNLRGPKAKTNFPIDS 87

[Close]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match: sp|O80340|ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.9e-33
Identity = 105/213 (49.30%), Postives = 123/213 (57.75%), Query Frame = 0 

Query: 7   STSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREF 66
           +T+ T   +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD AAR+F
Sbjct: 12  TTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDF 71

Query: 67  RGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIH 126
           RGA AKTNFP  T   + D    + F     + SPS SST++ +SP PT   P    G  
Sbjct: 72  RGAKAKTNFP--TFLELSDQKVPTGF-----ARSPSQSSTLDCASP-PTLVVPSATAGNV 131

Query: 127 PPGI-----------------SPPIFFFDAF-------AQAEKNISDFRRTV----TAAV 186
           PP +                 S P++F D          Q     S FR  V    T   
Sbjct: 132 PPQLELSLGGXXXXSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMA 191

Query: 187 AGA-SDSDSSSVGDFD--TTRKSRPLDFDLNLP 189
            GA SDSDSSSV DF+    ++S+ LD DLNLP
Sbjct: 192 CGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLP 216

[Close]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match: sp|Q40477|ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-27
Identity = 69/117 (58.97%), Postives = 78/117 (66.67%), Query Frame = 0 

Query: 16  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTNF 75
           KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYD AAREFRG  AKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 76  PLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIHPPGISP 133
           P  T+                 + SPSHSSTVESSS          + G+H P  +P
Sbjct: 83  PSPTE-----------------NQSPSHSSTVESSSG---------ENGVHAPPHAP 113

[Close]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match: sp|Q9MAI5|ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 82/183 (44.81%), Postives = 111/183 (60.66%), Query Frame = 0 

Query: 15  SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTN 74
           +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYDAAAR+FRG  AKTN
Sbjct: 26  AKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTN 85

Query: 75  FPLQTDFLIVDNNNHSNFHKSACSTSPSHSST-VESSSPSPTPSDPYLDGGIHPPG---- 134
           F +                     +SP+ SST V+S + +   + P+L+  +   G    
Sbjct: 86  FGV------------------IVGSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRR 145

Query: 135 ---ISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFD--TTRKSRPLDFD 188
              +  P++++        N++ + +  T  V   S+S++SSV DF+    + S PLD D
Sbjct: 146 KIPLVHPVYYY--------NMATYPKMTTCGV--QSESETSSVVDFEGGAGKISPPLDLD 180

[Close]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match: sp|Q9LW49|ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 68/117 (58.12%), Postives = 78/117 (66.67%), Query Frame = 0 

Query: 16  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTNF 75
           KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYD AAREFRG  AKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 76  PLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIHPPGISP 133
           PL ++                 + S SHSST+ESSS          + GIH P  +P
Sbjct: 83  PLPSE-----------------NQSTSHSSTMESSSG---------ETGIHAPPHAP 113

[Close]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match: sp|Q9FE67|ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 79/191 (41.36%), Postives = 104/191 (54.45%), Query Frame = 0 

Query: 4   GDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAA 63
           G   T T     KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD AA
Sbjct: 17  GGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAA 76

Query: 64  REFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDG 123
           REFRG+ AKTNFPL  +   V++   ++ + +  + + +   T     P     +  + G
Sbjct: 77  REFRGSKAKTNFPLPGESTTVNDGGENDSYVNRTTVTTAREMT-RQRFPFACHRERKVVG 136

Query: 124 GIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRPLDF 183
           G    G     FFFD  ++A    ++  R         +   S  + +       R L+ 
Sbjct: 137 GYASAG-----FFFDP-SRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRELNL 196

Query: 184 DLNL--PAVEV 193
           DLNL  P V+V
Sbjct: 197 DLNLAPPVVDV 200

[Close]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match: tr|A0A0A0L4P1|A0A0A0L4P1_CUCSA (Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 6.8e-102
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 

Query: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120
           AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY
Sbjct: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120

Query: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180
           LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP
Sbjct: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180

Query: 181 LDFDLNLPAVEV 193
           LDFDLNLPAVEV
Sbjct: 181 LDFDLNLPAVEV 192

[Close]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match: tr|A0A1S3CLM9|A0A1S3CLM9_CUCME (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.6e-82
Identity = 165/192 (85.94%), Postives = 169/192 (88.02%), Query Frame = 0 

Query: 1   MAAGDRSTSTTPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60
           MAAGDRSTS  PP SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD
Sbjct: 1   MAAGDRSTSAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYD 60

Query: 61  AAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPY 120
            AAREFRGANAKTNFP+Q DFLIVD NNH+NFHKSACS+SPSHSSTVESSSPSPTPS+PY
Sbjct: 61  TAAREFRGANAKTNFPVQNDFLIVD-NNHTNFHKSACSSSPSHSSTVESSSPSPTPSNPY 120

Query: 121 LDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRP 180
           LDGGIH PGIS PIFFFDAFAQAEK ISDFRRTVT             V DFDTTRKSRP
Sbjct: 121 LDGGIHAPGISRPIFFFDAFAQAEK-ISDFRRTVTXXXXXXXXXXXXXVVDFDTTRKSRP 180

Query: 181 LDFDLNLPAVEV 193
           LDFDLNLPAVEV
Sbjct: 181 LDFDLNLPAVEV 190

[Close]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match: tr|I1KDR5|I1KDR5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786709 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.1e-38
Identity = 101/179 (56.42%), Postives = 116/179 (64.80%), Query Frame = 0 

Query: 13  PTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAK 72
           PT KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYD AAREFRG  AK
Sbjct: 20  PTHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGTKAK 79

Query: 73  TNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSP---TPSDPYLDGGIHPPG 132
           TNFP                  +A + SPS SST++SSSP P   T + P    G     
Sbjct: 80  TNFPTH----------------AAAARSPSQSSTLDSSSPPPLDLTLAAPLTAAGALVFP 139

Query: 133 ISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTRKSRPLDFDLNLP 189
           ++ P+ FFDAFA+AE      R +    VAG SDSDSSSV D++     + LD DLN+P
Sbjct: 140 VARPVVFFDAFARAE-----VRASFDLPVAGFSDSDSSSVVDYERVPHRKVLDLDLNVP 177

[Close]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match: tr|A0A2I4EUY5|A0A2I4EUY5_9ROSI (ethylene-responsive transcription factor 4-like OS=Juglans regia OX=51240 GN=LOC108992941 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 110/200 (55.00%), Postives = 122/200 (61.00%), Query Frame = 0 

Query: 15  SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAREFRGANAKTN 74
           SKEIR+RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDAAA EFRG  AKTN
Sbjct: 16  SKEIRFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAALEFRGVKAKTN 75

Query: 75  FPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTPSDPYLDGGIHPPGISP-- 134
           FP     L   NNN       + + SPS SSTV+SSS +P P D  L G    P + P  
Sbjct: 76  FPNTCSDLTSLNNN-------STTRSPSQSSTVDSSSTTPQPLDLTLGGSAQYP-VGPTV 135

Query: 135 ---------PIFFFDAFAQAEKN----------ISDFRRTVTAAVAGASDSDSSSVGDFD 194
                    PI+FF+AFA    N           +DF RTV +     SDSDSSSV DF 
Sbjct: 136 AFPVVTAVRPIYFFNAFANMSGNHRDLCRFDRAETDFLRTVGS--GAHSDSDSSSVVDFH 195

[Close]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match: tr|D5L141|D5L141_MALDO (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D57 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36
Identity = 114/215 (53.02%), Postives = 131/215 (60.93%), Query Frame = 0 

Query: 6   RSTSTTP-PTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDAAAR 65
           +S S  P PTS E R+RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAA AYD AAR
Sbjct: 11  KSGSEDPNPTSNETRFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAACAYDKAAR 70

Query: 66  EFRGANAKTNFPLQTDFLIVDNNNHSNFHKSA-------CSTSP-SHSSTVESSS-PSPT 125
           EFRG  AKTNFP  T+ L +D  N +N + +A        S SP SHSSTVESSS PSP 
Sbjct: 71  EFRGGKAKTNFPTPTE-LHLDAVNIANMNNAAKLAATTNISNSPSSHSSTVESSSPPSPR 130

Query: 126 PSD-----PYLD---------GGIHPPGISPPIFFFDAFAQAE--------KNISDFRRT 185
           P D     P L           G  P   S P+ FFDAFA+A+        +    F   
Sbjct: 131 PLDLTLKTPRLSTGGGYFTAASGFRPLPASRPVIFFDAFARADSTATLQHARETCRFDPP 190

Query: 186 VTAAVAGASDSDSSSVGDFDTTRKSRPLDFDLNLP 189
              + +G SDS SSSV DF+ T ++  LD DLNLP
Sbjct: 191 APTSGSGHSDSSSSSVVDFERTSRNGLLDLDLNLP 224

The following BLAST results are available for this feature:
BLAST of CsaV3_4G033470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146050.11.0e-101100.00PREDICTED: ethylene-responsive transcription factor 4 [Cucumis sativus] >KGN5510... [more]
XP_008463800.16.9e-8285.94PREDICTED: ethylene-responsive transcription factor 4 [Cucumis melo][more]
XP_022935731.13.3e-6877.55ethylene-responsive transcription factor 4-like [Cucurbita moschata][more]
XP_023536061.11.9e-6374.49ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo][more]
XP_022976583.14.2e-6373.98ethylene-responsive transcription factor 4-like [Cucurbita maxima][more]
BLAST of CsaV3_4G033470 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15210.13.8e-3449.30ethylene responsive element binding factor 4[more]
AT1G53170.12.0e-2744.81ethylene response factor 8[more]
AT5G44210.11.1e-2541.36erf domain protein 9[more]
AT1G28370.12.8e-2464.58ERF domain protein 11[more]
AT1G50640.11.8e-2367.53ethylene responsive element binding factor 3[more]
BLAST of CsaV3_4G033470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O80340|ERF78_ARATH6.9e-3349.30Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q40477|ERF4_TOBAC7.4e-2758.97Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ... [more]
sp|Q9MAI5|ERF79_ARATH3.7e-2644.81Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q9LW49|ERF4_NICSY1.1e-2558.12Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER... [more]
sp|Q9FE67|ERF80_ARATH2.0e-2441.36Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
BLAST of CsaV3_4G033470 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4P1|A0A0A0L4P1_CUCSA6.8e-102100.00Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1[more]
tr|A0A1S3CLM9|A0A1S3CLM9_CUCME4.6e-8285.94ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018... [more]
tr|I1KDR5|I1KDR5_SOYBN9.1e-3856.42Uncharacterized protein OS=Glycine max OX=3847 GN=100786709 PE=4 SV=1[more]
tr|A0A2I4EUY5|A0A2I4EUY5_9ROSI1.2e-3755.00ethylene-responsive transcription factor 4-like OS=Juglans regia OX=51240 GN=LOC... [more]
tr|D5L141|D5L141_MALDO2.2e-3653.02AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D57 PE=2 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0071310 cellular response to organic substance
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0006952 defense response
biological_process GO:0009725 response to hormone
biological_process GO:0007165 signal transduction
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G033470.1CsaV3_4G033470.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 42..58
score: 74.65
coord: 20..31
score: 66.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 19..82
e-value: 1.4E-36
score: 137.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 19..68
e-value: 7.3E-14
score: 51.6
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 19..76
score: 24.579
IPR001471AP2/ERF domainCDDcd00018AP2coord: 19..76
e-value: 2.17996E-18
score: 75.0007
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 2..121
e-value: 1.2E-27
score: 95.1
coord: 130..191
e-value: 72.0
score: 0.8
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 18..78
e-value: 3.4E-31
score: 108.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..117
NoneNo IPR availablePANTHERPTHR31677:SF17ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATEDcoord: 13..143
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 13..143
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 19..77

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G033470CSPI04G23250Wild cucumber (PI 183967)cpicucB212
CsaV3_4G033470Cucsa.122930Cucumber (Gy14) v1cgycucB167
CsaV3_4G033470CmaCh09G008460Cucurbita maxima (Rimu)cmacucB0028
CsaV3_4G033470CmaCh01G012220Cucurbita maxima (Rimu)cmacucB0566
CsaV3_4G033470CmoCh01G012750Cucurbita moschata (Rifu)cmocucB0552
CsaV3_4G033470CmoCh09G008400Cucurbita moschata (Rifu)cmocucB0016
CsaV3_4G033470CsGy4G021630Cucumber (Gy14) v2cgybcucB171
CsaV3_4G033470Carg17081Silver-seed gourdcarcucB0194
CsaV3_4G033470Carg14708Silver-seed gourdcarcucB0344
CsaV3_4G033470Cla023361Watermelon (97103) v1cucwmB367
CsaV3_4G033470MELO3C025608Melon (DHL92) v3.5.1cucmeB299
CsaV3_4G033470ClCG11G017830Watermelon (Charleston Gray)cucwcgB288
CsaV3_4G033470Lsi04G020490Bottle gourd (USVL1VR-Ls)cuclsiB304
CsaV3_4G033470MELO3C025608.2Melon (DHL92) v3.6.1cucmedB291
CsaV3_4G033470Cla97C01G023060Watermelon (97103) v2cucwmbB272
CsaV3_4G033470Cla97C11G223860Watermelon (97103) v2cucwmbB281
CsaV3_4G033470Bhi09G002830Wax gourdcucwgoB426
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_4G033470CsaV3_6G050320Cucumber (Chinese Long) v3cuccucB183
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G033470Cucurbita maxima (Rimu)cmacucB0258
CsaV3_4G033470Cucurbita maxima (Rimu)cmacucB0396
CsaV3_4G033470Cucurbita moschata (Rifu)cmocucB0246
CsaV3_4G033470Cucurbita moschata (Rifu)cmocucB0393
CsaV3_4G033470Cucurbita pepo (Zucchini)cpecucB0270
CsaV3_4G033470Cucurbita pepo (Zucchini)cpecucB0702
CsaV3_4G033470Cucurbita pepo (Zucchini)cpecucB0970
CsaV3_4G033470Wild cucumber (PI 183967)cpicucB039
CsaV3_4G033470Bottle gourd (USVL1VR-Ls)cuclsiB291
CsaV3_4G033470Cucumber (Chinese Long) v3cuccucB030
CsaV3_4G033470Silver-seed gourdcarcucB0690
CsaV3_4G033470Cucumber (Gy14) v2cgybcucB034