CsaV3_4G031250 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G031250
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Auxin-responsive protein
Location	chr4 : 21527505 .. 21528746 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGTTGAGTTCCACAATAATACTAAAACTTTCCAACTTTTCTGTTCTTGAAATGCAATAGAAACAAGGCAATAAAAGAAAAAAAAGAAAGAAAGAAATAAAGAAGTGGAGTAGTACACGCTCTATCTCATTCTAGTTCCACAAAATAATAAATGAGAAAAACAAAAATGGACAAGTCAAAAAGCAATCAATACATGATTCGATTTGACAGTCTTAAAAGAAAACGAAATTCCTTTACACCCACCACTCTCTAACCAAGTATGTGTGTATATATATATATGTCCATTACAAACAATGAAACTGTGAGAGGAAAAAAAAGATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGAGGAGAACTTTTGTTTAGATGGATGGGTTTAGGGTTAGAAAGATGTGAACCCTAATTCAAAAAACATGTGTGTGTATGTCTTAGCTTTCTTCTTGCTGTATATTTTTTAAAATTGGCAATGAAGATGGATTTGTGTTTTGACATAAAAAAAAAAAGTTTAATGAATTGGAGGTTTAGAATAACAATTTTTGTCGCTATGAATATATATTTTTTTTGTTATCATTAATTGTGGGGAGAGAATCTTTTTTCCAACCCTTCATTTGTGGGTGATTCTATAAAAAAGGTCAAAAGTAAACTAAACTTTATGCCCGCAATGAACACATTTGTAGAATAATAATGTAGCAGTACTATTTATATCATCGAATTTAAGTGGTTTGAACATTGAGCTAAAGGTGCTTTTTATTCGGGTTGTTTGGAGTATTTGACTATTTGTTAACCCAACCAGTATTTATACCAATAAACTTCATAACTTGGTGTTTAATGGATCAACCAGCAGCTACAACAGATAAACAACTTCAGCAGCATGCTCCAACTAATGCCTCCTACAATCAACCTCTACATCCAACTCCACTTATATCG

mRNA sequence

ATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA

Coding sequence (CDS)

ATGCCCGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCAAGAGGAAGATGAAAGACTAGAAAGATTTGTAGTTCCAATATCTTATTTATATCATCCTCTATTCAAGAATCTTTTGGACAAAGCTCAAGAAATTTATGGCTACCATGCCAATGGTCCTCTTCGGCTTCCATGCTCAGTCGACGACTTTCTCCAACTCCGATGGCAGATCGAGAAAGAATCTGACCAACATATTGACAAACAAAATCATCATCGTCATCGTTATCGCCACCACCATCACCACTATCATCTTCCACTTGCTTTGTCTTTCCAGTCTTGTTGA

Protein sequence

MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWQIEKESDQHIDKQNHHRHRYRHHHHHYHLPLALSFQSC

Homology

[Close]

BLAST of CsaV3_4G031250 vs. NCBI nr
Match: KGN54862.1 (SAUR family protein [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-44
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
           MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP
Sbjct: 1   MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60

Query: 61  LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC 114
           LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC
Sbjct: 61  LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC 113

[Close]

BLAST of CsaV3_4G031250 vs. NCBI nr
Match: XP_022154927.1 (auxin-responsive protein SAUR32-like [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQ-EEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANG 60
          M E+KKMKVKKGWLAVEVGLQ EED R+ERFVVPISYLYHPLFK LLDKAQE+YGYHANG
Sbjct: 1  MGERKKMKVKKGWLAVEVGLQEEEDGRIERFVVPISYLYHPLFKKLLDKAQEVYGYHANG 60

Query: 61 PLRLPCSVDDFLQLRWQIEKESDQH 85
          PLRLPCSVDDFLQLRW+I+KESDQH
Sbjct: 61 PLRLPCSVDDFLQLRWRIKKESDQH 85

[Close]

BLAST of CsaV3_4G031250 vs. NCBI nr
Match: XP_002272614.1 (PREDICTED: auxin-responsive protein SAUR32-like [Vitis vinifera])

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-30
Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
          M E+KKMKVKKGWLAVEVGL+EED   +RFV+PISYLYHPLFK LL+KAQE+YG+H  GP
Sbjct: 1  MQEEKKMKVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGP 60

Query: 61 LRLPCSVDDFLQLRWQIEKES 82
          LRLPCSVDDFL LRW+IE+E+
Sbjct: 61 LRLPCSVDDFLHLRWRIEREN 81

[Close]

BLAST of CsaV3_4G031250 vs. NCBI nr
Match: PON88812.1 (Small auxin-up RNA [Trema orientalis])

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
          M E +KMKVKKGWLAVEVGL++ED   +RF +PISYLYHPLFK LL+KAQE+YGYH  GP
Sbjct: 1  MQEDRKMKVKKGWLAVEVGLEDEDGGFQRFTIPISYLYHPLFKRLLEKAQEVYGYHTAGP 60

Query: 61 LRLPCSVDDFLQLRWQIEKE 81
          LRLPCSVDDFL LRW+IEKE
Sbjct: 61 LRLPCSVDDFLHLRWRIEKE 80

[Close]

BLAST of CsaV3_4G031250 vs. NCBI nr
Match: PNX67771.1 (auxin-induced protein 6b-like [Trifolium pratense])

HSP 1 Score: 137.9 bits (346), Expect = 2.2e-29
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDE---RLERFVVPISYLYHPLFKNLLDKAQEIYGYHA 60
          M E KKMKVKKGWLAV+VGL+EE+E     ++FV+PISYLYHPLFKNLLD+A ++YGYH 
Sbjct: 2  MQEDKKMKVKKGWLAVQVGLEEEEEGGSASQKFVIPISYLYHPLFKNLLDQAYDVYGYHT 61

Query: 61 NGPLRLPCSVDDFLQLRWQIEKES--DQH 85
          NGPL+LPCSVDDFL LRW+IEKES  +QH
Sbjct: 62 NGPLKLPCSVDDFLHLRWRIEKESGPNQH 90

[Close]

BLAST of CsaV3_4G031250 vs. TAIR10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 32/73 (43.84%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 9   VKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGPLRLPCSVD 68
           V KG +A+ VG ++++E L RFVVP+ +L HPLF +LL +A++ YG+  +GP+ +PC VD
Sbjct: 46  VPKGCVAIMVGHEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVD 105

Query: 69  DFLQLRWQIEKES 82
           +F  ++  I++E+
Sbjct: 106 EFKHVQEVIDEET 118

[Close]

BLAST of CsaV3_4G031250 vs. TAIR10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-12
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 8   KVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGPLRLPCSV 67
           KV KG LAV+VG  EE    ERFV+P+ Y  HPLF  LL +A+E +G+   G + +PC V
Sbjct: 27  KVPKGCLAVKVGQGEEQ---ERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHV 86

Query: 68  DDFLQLRWQIEKESDQHI 86
           ++F  ++  I++E+ + +
Sbjct: 87  EEFRYVQGLIDRENTRFL 101

[Close]

BLAST of CsaV3_4G031250 vs. TAIR10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 67.8 bits (164), Expect = 5.0e-12
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 9  VKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGPLRLPCSVD 68
          V KG LA++VG +EE++  +RFVVP+ Y  HPLF  LL +A+E YG+   G + +PC V+
Sbjct: 30 VPKGCLAIKVGSKEEEK--QRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVE 89

Query: 69 DFLQLRWQIEKE 81
           F  ++  I +E
Sbjct: 90 VFRYVQDMINRE 99

[Close]

BLAST of CsaV3_4G031250 vs. TAIR10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11
Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 4  KKKMKVK---KGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 63
          K+ +KVK   KG LA++VG Q E++  +RF+VP+ Y  HPLF  LL +A++ YG+   G 
Sbjct: 16 KQSVKVKDVPKGCLAIKVGSQGEEQ--QRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGT 75

Query: 64 LRLPCSVDDFLQLRWQIEKE 81
          + +PC V++F  ++  I+ E
Sbjct: 76 ITIPCHVEEFRYVQALIDGE 93

[Close]

BLAST of CsaV3_4G031250 vs. TAIR10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.5 bits (153), Expect = 9.4e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 0


Query: 3  EKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGY-HANGPL 62
          +K++ +V KG +AV VG  EE E  +RFVVPISYL HP F+ LL +A+E +G+ H  G L
Sbjct: 15 QKQQSRVPKGHVAVYVG--EEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGL 74

Query: 63 RLPCSVDDFLQL 74
           +PC  + F+ L
Sbjct: 75 TIPCREETFVGL 84

[Close]

BLAST of CsaV3_4G031250 vs. Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-10
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 5  KKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGY-HANGPLRL 64
          K + V+KG+LAV VG     E++ RFV+P+SYL  P F++LL +A+E +GY H NG L +
Sbjct: 21 KAVDVEKGYLAVYVG-----EKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTI 80

Query: 65 PCSVDDF 71
          PCS D F
Sbjct: 81 PCSEDVF 82

[Close]

BLAST of CsaV3_4G031250 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-10
Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 4  KKKMKVK---KGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 63
          K+ +KVK   KG LA++VG Q E++  +RF+VP+ Y  HPLF  LL +A++ YG+   G 
Sbjct: 16 KQSVKVKDVPKGCLAIKVGSQGEEQ--QRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGT 75

Query: 64 LRLPCSVDDFLQLRWQIEKE 81
          + +PC V++F  ++  I+ E
Sbjct: 76 ITIPCHVEEFRYVQALIDGE 93

[Close]

BLAST of CsaV3_4G031250 vs. Swiss-Prot
Match: sp|P33080|AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-09
Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 5  KKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGY-HANGPLRL 64
          K ++V KG+L V VG     +++ RF++P+SYL  P F++LL++A+E +GY H  G L +
Sbjct: 21 KSVEVPKGYLVVYVG-----DKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTI 80

Query: 65 PCSVDDFL 72
          PC  D+FL
Sbjct: 81 PCKEDEFL 83

[Close]

BLAST of CsaV3_4G031250 vs. Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.4e-09
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 5  KKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGY-HANGPLRL 64
          K     KG+LAV VG     E+L+RFV+P+SYL  P F++LL +A+E +GY H  G L +
Sbjct: 13 KAADAPKGYLAVYVG-----EKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTI 72

Query: 65 PCSVDDF 71
          PCS D F
Sbjct: 73 PCSEDVF 74

[Close]

BLAST of CsaV3_4G031250 vs. Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 5  KKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGY-HANGPLRL 64
          K +   KG+LAV VG     E ++RFV+P+S+L  PLF++LL +A+E +GY H  G L +
Sbjct: 21 KVLDAPKGYLAVYVG-----ENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTI 80

Query: 65 PCSVDDF 71
          PCS D F
Sbjct: 81 PCSEDLF 82

[Close]

BLAST of CsaV3_4G031250 vs. TrEMBL
Match: tr|A0A0A0L2M8|A0A0A0L2M8_CUCSA (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_4G556180 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
           MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP
Sbjct: 1   MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60

Query: 61  LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC 114
           LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC
Sbjct: 61  LRLPCSVDDFLQLRWQIEKESDQHIDKQXXXXXXXXXXXXXXXXXXXXXFQSC 113

[Close]

BLAST of CsaV3_4G031250 vs. TrEMBL
Match: tr|A0A2P5ETC9|A0A2P5ETC9_9ROSA (Small auxin-up RNA OS=Trema orientalis OX=63057 GN=TorRG33x02_153270 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
          M E +KMKVKKGWLAVEVGL++ED   +RF +PISYLYHPLFK LL+KAQE+YGYH  GP
Sbjct: 1  MQEDRKMKVKKGWLAVEVGLEDEDGGFQRFTIPISYLYHPLFKRLLEKAQEVYGYHTAGP 60

Query: 61 LRLPCSVDDFLQLRWQIEKE 81
          LRLPCSVDDFL LRW+IEKE
Sbjct: 61 LRLPCSVDDFLHLRWRIEKE 80

[Close]

BLAST of CsaV3_4G031250 vs. TrEMBL
Match: tr|A0A2K3KN80|A0A2K3KN80_TRIPR (Auxin-induced protein 6b-like OS=Trifolium pratense OX=57577 GN=L195_g055804 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-29
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDE---RLERFVVPISYLYHPLFKNLLDKAQEIYGYHA 60
          M E KKMKVKKGWLAV+VGL+EE+E     ++FV+PISYLYHPLFKNLLD+A ++YGYH 
Sbjct: 2  MQEDKKMKVKKGWLAVQVGLEEEEEGGSASQKFVIPISYLYHPLFKNLLDQAYDVYGYHT 61

Query: 61 NGPLRLPCSVDDFLQLRWQIEKES--DQH 85
          NGPL+LPCSVDDFL LRW+IEKES  +QH
Sbjct: 62 NGPLKLPCSVDDFLHLRWRIEKESGPNQH 90

[Close]

BLAST of CsaV3_4G031250 vs. TrEMBL
Match: tr|A0A2R6RDI2|A0A2R6RDI2_ACTCH (Auxin-responsive protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08023 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-29
Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
          M E+KKMKVKKGWLAV VG ++ED   +RFV+PISYLYHPLFK LL+KA E+YGYH  GP
Sbjct: 1  MQEEKKMKVKKGWLAVRVGSEDEDGGFQRFVIPISYLYHPLFKKLLEKAHEVYGYHTTGP 60

Query: 61 LRLPCSVDDFLQLRWQIEKE 81
          LRLPCSVDDFL LRWQIEKE
Sbjct: 61 LRLPCSVDDFLHLRWQIEKE 80

[Close]

BLAST of CsaV3_4G031250 vs. TrEMBL
Match: tr|A0A2I4DN05|A0A2I4DN05_9ROSI (auxin-induced protein 6B-like OS=Juglans regia OX=51240 GN=LOC108981711 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-29
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 1  MPEKKKMKVKKGWLAVEVGLQEEDERLERFVVPISYLYHPLFKNLLDKAQEIYGYHANGP 60
          M + KKMKVKKGWLAV VGL++ED   +RFV+PISYLYHPLFK LL+KA E+YGYH  GP
Sbjct: 1  MSDDKKMKVKKGWLAVRVGLEDEDGEFQRFVIPISYLYHPLFKRLLEKAHEVYGYHTTGP 60

Query: 61 LRLPCSVDDFLQLRWQIEKE 81
          LRLPCSVDDFL LRW+IEKE
Sbjct: 61 LRLPCSVDDFLHLRWRIEKE 80

The following BLAST results are available for this feature:

BLAST of CsaV3_4G031250 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54862.1	3.1e-44	100.00	SAUR family protein [Cucumis sativus]	[more]
XP_022154927.1	5.3e-36	89.41	auxin-responsive protein SAUR32-like [Momordica charantia]	[more]
XP_002272614.1	3.3e-30	77.78	PREDICTED: auxin-responsive protein SAUR32-like [Vitis vinifera]	[more]
PON88812.1	1.7e-29	77.50	Small auxin-up RNA [Trema orientalis]	[more]
PNX67771.1	2.2e-29	73.03	auxin-induced protein 6b-like [Trifolium pratense]	[more]

BLAST of CsaV3_4G031250 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53590.1	2.4e-14	43.84	SAUR-like auxin-responsive protein family	[more]
AT4G00880.1	1.7e-12	42.31	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	5.0e-12	44.44	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.9e-11	41.25	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	9.4e-11	48.61	SAUR-like auxin-responsive protein family	[more]

BLAST of CsaV3_4G031250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P33083\|AX6B_SOYBN	3.4e-10	50.75	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q9ZUZ3\|SAU32_ARATH	3.4e-10	41.25	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
sp\|P33080\|AX10A_SOYBN	4.9e-09	44.12	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|P33081\|AX15A_SOYBN	8.4e-09	49.25	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|P32295\|ARG7_VIGRR	1.4e-08	47.76	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]

BLAST of CsaV3_4G031250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L2M8\|A0A0A0L2M8_CUCSA	2.1e-44	100.00	SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_4G556180 PE=4 SV=1	[more]
tr\|A0A2P5ETC9\|A0A2P5ETC9_9ROSA	1.1e-29	77.50	Small auxin-up RNA OS=Trema orientalis OX=63057 GN=TorRG33x02_153270 PE=4 SV=1	[more]
tr\|A0A2K3KN80\|A0A2K3KN80_TRIPR	1.4e-29	73.03	Auxin-induced protein 6b-like OS=Trifolium pratense OX=57577 GN=L195_g055804 PE=...	[more]
tr\|A0A2R6RDI2\|A0A2R6RDI2_ACTCH	1.4e-29	77.50	Auxin-responsive protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]
tr\|A0A2I4DN05\|A0A2I4DN05_9ROSI	1.9e-29	76.25	auxin-induced protein 6B-like OS=Juglans regia OX=51240 GN=LOC108981711 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G031250.1	CsaV3_4G031250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 6..75 e-value: 4.8E-19 score: 68.2
None	No IPR available	PANTHER	PTHR31374:SF18	SUBFAMILY NOT NAMED	coord: 3..112
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 3..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G031250	CSPI04G20790	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G031250	Cucsa.357420	Cucumber (Gy14) v1	cgycucB543
CsaV3_4G031250	CmaCh03G001040	Cucurbita maxima (Rimu)	cmacucB0799
CsaV3_4G031250	CmoCh03G001110	Cucurbita moschata (Rifu)	cmocucB0782
CsaV3_4G031250	Cla008029	Watermelon (97103) v1	cucwmB348
CsaV3_4G031250	MELO3C009007	Melon (DHL92) v3.5.1	cucmeB336
CsaV3_4G031250	ClCG04G001150	Watermelon (Charleston Gray)	cucwcgB319
CsaV3_4G031250	Lsi01G019430	Bottle gourd (USVL1VR-Ls)	cuclsiB279
CsaV3_4G031250	MELO3C009007.2	Melon (DHL92) v3.6.1	cucmedB329
CsaV3_4G031250	Cla97C04G069240	Watermelon (97103) v2	cucwmbB308
CsaV3_4G031250	Bhi03G002226	Wax gourd	cucwgoB402

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G031250	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G031250	Cucurbita maxima (Rimu)	cmacucB1018
CsaV3_4G031250	Cucurbita moschata (Rifu)	cmocucB1001
CsaV3_4G031250	Cucurbita pepo (Zucchini)	cpecucB0076
CsaV3_4G031250	Cucurbita pepo (Zucchini)	cpecucB0613
CsaV3_4G031250	Wax gourd	cucwgoB413
CsaV3_4G031250	Silver-seed gourd	carcucB0314
CsaV3_4G031250	Silver-seed gourd	carcucB0898