CsaV3_4G029170 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G029170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionER membrane protein complex subunit 8/9 homolog
Locationchr4 : 18673110 .. 18677059 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTATGTATCATTTTTTGGTACTCAACCTAAATGTAGTAAGTATAACATTTGTTAAAACTTTATATCAAATGTATTTTTCTTTATTAATAAAATTTCAAAATGTATTTTTTAAAAAGAAAATTATAAAATTAACCCATTATTTATTTATTTATTTTGTCATTTCTTCTCACTTCTCTACTAATTAGCCATACTTAGCCATACGGCTTCACTTTGGCTGTAAACTCCGCCTCCTCTCTCAACCGTCTCTTCCGGCACACTTAACGGGAGATTTCCCAATTTCCGACTCATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGGTACTCCTTTGAACCATTTTACATCGGTATTTCATGTTTAGGTTTATGCAAACTGGTTGCTCGTGTGCGAATTTGTTGTGTTTGATGCCATGTTTACTCCTTTTCACTTCCTATTTGAGATCTGTGATTGATGAGGTCGTGGACATGCTTGATTTGCTATCAGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGGTAAGAATTGTCCTATTGTGCTTCATCTGTGCTGTTTTGTTTTGTATATTTCGTTTTGTTTGACTTATGCTCCTCTGCAGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGGTGAGTTTATCGCTATAGAATTCTTATCATGGTTTTGTAAATTTATTTGAACGCTACATTAGAATTGCCTCAATGAATTTCCACCATATTTTCTCTTGTACTTTTGGTTGAAAATCATTTGAAGGAGCAAAATTTTATCTCATGAACATGCCGAATTTGAATATTGTTGGTATTCAAGGACTGTGGAACATCGTAAAGTAGCTTTGTAACATTGTGAATTCATAATTCATCCGACAATTGAGGGGATATTCTTTTTAGGTTTCCCAAATGCTGGATTTGACCTTAAACTAAAAGGTCACGAGAATGCTTTATAGTATCGTCTTCTTTAGACAATTTCTTGCTTCTCTTCCATTCATGGAGAGTTGAATGTTATGGCAATATCATTTATTATTGCTGATGCTCTTTGCAATTGCAATATAGGAAAAAGTATGCTGGAGATTTTTACTGACTTTCTTACTCGTTATCATAGAATAGAGCCAGTGGTAGTAAGTAGTAACTAGATCTTCAAATTTATTTGGTTTTCTGAATCTGTTTCAATGTTCTCTAAATTTTGTTGGCTTGTACTGATTCTGCATTGGATTTGGGTACAGCTTGTGGGGTTTCTTTTAGGATGTGAAAGTTTGAGAGAGGCAATGGGAGTGTGATCTCTAATTTTGGTCGGAGCTGCTCCGGCGTTATTGTATTGTAGGATTTCATCAGATGCTCAGCATGGAATCTGTGGATGGGTCTAGGAGAAACTTCAATAGAATCTTTTTTACCCTATAGGTGGAGAGTCATTCCACTCCTTCATTTAGTTTTCCCCCACCACGGAGAGGGCTTATGTTTTAGGTGGATTCTCCGTGGTGGGGAGGCAATGAAGTGGATTTCTTTATCTCTTTCCTTTTGGGGTCTTCTATGGACTTTCAAAATTCAACCCAGCTATCCAAAAGTGGTGGCTTGAAGCTATATGTTTTTTCTATTGTAAATCTTGTTAGGGTTTTTGGTGCAAGACAAATTTAATTGTTCGAAGTTCAGTGTACAAACAAAGATTGAGAGATTGGGTGTTGGAGGAATGCATACCATCTATATTGTGGAGTGGGATAGACCTGGATGTTTATATTCTCCTTTTATTCATTTAACTTCGCAAGTAATTTTGGATTTCGTGAATCAACCTTATTTGATCATTCCCTTCTGCATTTTCCTAAAAAGGAAAAAATGGGTTTTATCCTGTTGGAGTTTCTTGTTTTACCAGCTACCTTGGGTTGGACTAGTGACTAAGGGCCAAAGAGAGGACAAGTTTAAGTTATGGCGATCGGCCATCTTCATTAGAATTCTTTGAATTTCTCTTTGGTACTTAAATGTAGCAGAGTGGTCATCTGGTGAAAGAATTTGGGTCGGAAGGGAGAATCATGGGTATCAGATTTGTTTCCAAATGGATTCCTACACTATTATATAGAATCTATGATACTTCGTTTGAGAAAAAGAATCTGTATTGGATGTTGGTTTGTTCAGGTATGCTTTGGATATGTGGCTAATATGTGAATTCAGGTATCCCATATAAATTGTTTTTTTGGCTAGCATGTCCTCTCCCAGATACTTGAAGGGGACAAGCTAGATTCTTTTTTTCCCTTTAAATATTGCAACCCACCCATTAGCCCATAATTGTCCTACCCCAAAAGAAGCATAAATTATGAACAAATTAAACAAAAAATTGTAAGTCCCTAGTCCCTATCTATTGCGACGTCAAGCAGACCTTCATCTTTAGAGTGATTGGATTTAGTTCATGGTGGCCTGATTTAAAATCCTATGAGTGAGTGTTACTGGGGGTTGGTGTCGTTGGAAGTTCACTTTAAGATTGGGAGTCTTCTGCGAGCTAGCATTTCTAGATTCCGATTGCTTCTCGTTCCAATTGCCTTTTATCACCTTAGCATAGCTATTTTACTCTTTCTAATATTCAAATTGATTCCGAGATGACCTGTATAAGGTTTCTTTGGAATCGTTTAGTTTAATCAAGATGTGATTGCATTTTATGAATAACTCCAGTTTACAATTAACACTATCTGATTATCATAGCTGTTTGTGCTGCATTCAACTTATGCATCCTGACTGAACCGGATGTCTTCTAATCTAGGAATACTTGTAAACTATAGGCCTTGTCTACGTTGTTAGTTTCATCTTGAAATATGGTAGAGACTAAGCATGAGGAGATGGTCGCATTAATGCTCTTCTCATTCATTTTGTTCGTTTTGTCTCCTACCAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGTACAACACACAATCCCCCTTCCCTTTTTCAATCATGAATGAATTTAAAAGTTAAAGCTTTGTTTTAAACTTCAAAATTTTGCAGGGATTGGTTGAATCCAGACCTCTTCAAGTAAAGATCTTTTAGAAGAGATTGGTTGGAAAATGGAGCCTTGTGCTTTTCAATGATTGAGAATATTGTTAGATGCACATTACTATTAGGTAATGGTCAAATTTTATCTCATTGGACTTTGATTAGCTTTCTTTGATTCGAGATACCGAAGTTCTCGGTCTTGAAGAACTTTTGAGTTCAAGGCGAATGTTTATGGAGTTCATTTGGATGATGTACACTAACACAACTTCTCATTCTTTGAATGGGAAAGACAAACACTACCATGCATTGAGGATCAGTTTATTGGTTGAGAATGGCTTTGAAGATTATTCAAAATGAAAATTTTAGGAGAGAAGTACCATTCCTTGTATTGTTTTCCTTAAAAAGAAATTAACTTTTATGTAATTACTTTAAGGATTAATTCTGCTTTTTTAGAATATAGTGTTACAATTAGTCGATTAGCAGTAGAGTGAGAAATTAAGTTTTTTTTTTAAATATATAATTAAT

mRNA sequence

ATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGGATTGGTTGAATCCAGACCTCTTCAAGTAA

Coding sequence (CDS)

ATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGGATTGGTTGAATCCAGACCTCTTCAAGTAA

Protein sequence

MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLPQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDHRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQDVVDFDDHLDDISKDWLNPDLFK
BLAST of CsaV3_4G029170 vs. NCBI nr
Match: XP_004144311.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KGN54668.1 hypothetical protein Csa_4G419600 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-110
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. NCBI nr
Match: XP_008455761.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 2.9e-109
Identity = 200/203 (98.52%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHR++AVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLM+KEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. NCBI nr
Match: XP_022950917.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 3.3e-105
Identity = 191/203 (94.09%), Postives = 199/203 (98.03%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKL+LHALKHRT+AVNG+LLGRISGP DVIEI+DSVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLILHALKHRTSAVNGLLLGRISGPTDVIEIADSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYT+ET KNWKLAGSDGSSQL +KEP AN+VLLD+ISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTRETPKNWKLAGSDGSSQLTIKEPLANMVLLDYISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. NCBI nr
Match: XP_023543492.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.9 bits (995), Expect = 2.2e-104
Identity = 189/203 (93.10%), Postives = 199/203 (98.03%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           M GD RFEISQNAYIKL+LHALKHRT+AVNG+LLGRISGPNDVIEI+DSVPLFHSSIGLL
Sbjct: 1   MAGDQRFEISQNAYIKLILHALKHRTSAVNGLLLGRISGPNDVIEIADSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAK+IGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKHIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYT+ETSKNWKLAGSDGSSQL +KEP AN+VLLD++SSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTRETSKNWKLAGSDGSSQLTIKEPLANMVLLDYVSSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. NCBI nr
Match: XP_022966460.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 1.4e-103
Identity = 191/203 (94.09%), Postives = 198/203 (97.54%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRT+AVNGVLLGRISG NDVIEI++SVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGL+IVGYFHAN RFDDY+VGGVAKNI DHISR FPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANVRFDDYDVGGVAKNIADHISRSFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGSSQL MKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. TAIR10
Match: AT5G55940.1 (Uncharacterised protein family (UPF0172))

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-82
Identity = 144/201 (71.64%), Postives = 179/201 (89.05%), Query Frame = 0

Query: 3   GDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPND-VIEISDSVPLFHSSIGLLP 62
           G+L++EISQNAYIKLVLH+L+H+T AVNGVL+GRIS  +D V+EISDSVPLFHS++ LLP
Sbjct: 7   GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLP 66

Query: 63  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 122
            LEISL++IEE+Y A+GL+IVGYFHANERFDD E+ GVAKNIGDHISR+FP A +LLL++
Sbjct: 67  PLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNN 126

Query: 123 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQD 182
           +KLEAL K K+RSPVM+L  K+ SKNW++ G+DG S+L++KEPSANVVL D+ISSEKW+D
Sbjct: 127 KKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKD 186

Query: 183 VVDFDDHLDDISKDWLNPDLF 203
           V D DDHLDD++KDWLNP LF
Sbjct: 187 VTDVDDHLDDVTKDWLNPGLF 207

BLAST of CsaV3_4G029170 vs. TAIR10
Match: AT5G51620.2 (Uncharacterised protein family (UPF0172))

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0

Query: 69  LIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIG 105
           +IEE+Y A+GL+IVGYFHANERFDD E+ GVAKNIG
Sbjct: 1   MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIG 36

BLAST of CsaV3_4G029170 vs. Swiss-Prot
Match: sp|Q9FG71|EMC89_ARATH (ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 GN=EMB2731 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.9e-81
Identity = 144/201 (71.64%), Postives = 179/201 (89.05%), Query Frame = 0

Query: 3   GDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPND-VIEISDSVPLFHSSIGLLP 62
           G+L++EISQNAYIKLVLH+L+H+T AVNGVL+GRIS  +D V+EISDSVPLFHS++ LLP
Sbjct: 7   GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLP 66

Query: 63  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 122
            LEISL++IEE+Y A+GL+IVGYFHANERFDD E+ GVAKNIGDHISR+FP A +LLL++
Sbjct: 67  PLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNN 126

Query: 123 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQD 182
           +KLEAL K K+RSPVM+L  K+ SKNW++ G+DG S+L++KEPSANVVL D+ISSEKW+D
Sbjct: 127 KKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKD 186

Query: 183 VVDFDDHLDDISKDWLNPDLF 203
           V D DDHLDD++KDWLNP LF
Sbjct: 187 VTDVDDHLDDVTKDWLNPGLF 207

BLAST of CsaV3_4G029170 vs. Swiss-Prot
Match: sp|Q9DB76|EMC9_MOUSE (ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.2e-25
Identity = 69/194 (35.57%), Postives = 105/194 (54.12%), Query Frame = 0

Query: 8   EISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLPQLEISL 67
           EIS  AY K+ LHA ++   AVNG+LL   +G  + + ++D VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDHRKLEAL 127
             ++ + A  GL + GY+HAN   DD   G +A  I   I+ FFP A L++LD++KL   
Sbjct: 65  NQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTR 124

Query: 128 PKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

BLAST of CsaV3_4G029170 vs. Swiss-Prot
Match: sp|Q5U1W7|EMC9_RAT (ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-24
Identity = 67/194 (34.54%), Postives = 104/194 (53.61%), Query Frame = 0

Query: 8   EISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLPQLEISL 67
           EIS  AY K+ LHA ++   AVNG+LL   +   + + ++D VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDHRKLEAL 127
             ++ +    GL + GY+HAN   DD   G +A  I   I+ FFP+A L++LD++KL   
Sbjct: 65  NQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTW 124

Query: 128 PKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

BLAST of CsaV3_4G029170 vs. Swiss-Prot
Match: sp|Q9Y3B6|EMC9_HUMAN (ER membrane protein complex subunit 9 OS=Homo sapiens OX=9606 GN=EMC9 PE=1 SV=3)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-23
Identity = 66/194 (34.02%), Postives = 103/194 (53.09%), Query Frame = 0

Query: 8   EISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLPQLEISL 67
           EIS  AY+K+ LHA ++   AVNG+ L       + + ++D VPLFHS + L   LE++L
Sbjct: 5   EISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDHRKLEAL 127
             ++ + A  GL + GY+HAN   +D   G +A  I   I+ FFP A L++LD++KL   
Sbjct: 65  NQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQ 124

Query: 128 PKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

BLAST of CsaV3_4G029170 vs. Swiss-Prot
Match: sp|Q5FVL2|EMC8_RAT (ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 64/205 (31.22%), Postives = 103/205 (50.24%), Query Frame = 0

Query: 8   EISQNAYIKLVLHALKHRTTAVNGVLLGRISGP---------NDVIEISDSVPLFHSSIG 67
           +++  AY K+VLH  K+   AVNG+L+     P         N  + + D +PLFH ++ 
Sbjct: 5   KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFV-DCIPLFHGTLA 64

Query: 68  LLPQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLL 127
           L P LE++L LI+ +       I GY+ ANER  D     VA+ +   I+  F  AAL++
Sbjct: 65  LTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIM 124

Query: 128 LDHRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEK 187
           +D+ K          +P + +Y +  ++ W+    D         P A  +    + S  
Sbjct: 125 VDNAKF----TMDCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRS 184

Query: 188 WQDVVDFDDHLDDISKDWLNPDLFK 204
           ++ +VDFD+HLDDI  DW NP++ K
Sbjct: 185 YETLVDFDNHLDDIRSDWTNPEINK 201

BLAST of CsaV3_4G029170 vs. TrEMBL
Match: tr|A0A0A0KYR9|A0A0A0KYR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.8e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. TrEMBL
Match: tr|A0A1S3C2C1|A0A1S3C2C1_CUCME (ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC103495860 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.9e-109
Identity = 200/203 (98.52%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHR++AVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLM+KEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

BLAST of CsaV3_4G029170 vs. TrEMBL
Match: tr|A0A2P5ELD8|A0A2P5ELD8_9ROSA (ER membrane protein complex subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_178980 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 4.0e-91
Identity = 165/203 (81.28%), Postives = 186/203 (91.63%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGG+LR+EI QNAYIKLVLHALKH+ +AVNGVLLGR+S  NDV+EI+DSVPLFHS IGLL
Sbjct: 1   MGGELRYEIGQNAYIKLVLHALKHKASAVNGVLLGRVSPTNDVVEITDSVPLFHSHIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISL+LIEEYYAAKG+NIVGYFHANERFDD E+GGVAKNIGDHI+R+FP AA+LLLD
Sbjct: 61  PQLEISLILIEEYYAAKGVNIVGYFHANERFDDLELGGVAKNIGDHIARYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           ++KL AL K KDRSPVM+LY K+ SKNWKL GSDG   L+ KEPSANVVLLD+IS+EKWQ
Sbjct: 121 NKKLAALEKVKDRSPVMQLYAKDASKNWKLVGSDGGYLLITKEPSANVVLLDYISTEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

BLAST of CsaV3_4G029170 vs. TrEMBL
Match: tr|A0A2P4HGN1|A0A2P4HGN1_QUESU (Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_61558 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.2e-91
Identity = 161/203 (79.31%), Postives = 190/203 (93.60%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGG+ R+EI+QNAY+K+VLHALKH+++AVN VLLGR+S  NDV+EI+DSVPLFHS +GLL
Sbjct: 1   MGGEWRYEIAQNAYMKIVLHALKHKSSAVNAVLLGRVSPTNDVVEITDSVPLFHSHLGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISL+LIEE+YAAKG+NIVGYFHANERFDDYE+ GVAKN+GDHI R+FP AA+LLLD
Sbjct: 61  PQLEISLILIEEHYAAKGVNIVGYFHANERFDDYELSGVAKNVGDHIYRYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           ++KLEALPK KDRSPVM+LYT+++SKNWKLAG +GSSQL +KEPSAN VLLD IS+EKWQ
Sbjct: 121 NKKLEALPKGKDRSPVMQLYTRDSSKNWKLAGGEGSSQLTIKEPSANAVLLDHISTEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

BLAST of CsaV3_4G029170 vs. TrEMBL
Match: tr|A0A2P4L507|A0A2P4L507_QUESU (Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_77265 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90
Identity = 160/203 (78.82%), Postives = 190/203 (93.60%), Query Frame = 0

Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60
           MGG+ R+EI+QNAY+K+VLHALKH+++AVN VLLGR+S  N+V+EI+DSVPLFHS +GLL
Sbjct: 1   MGGEWRYEIAQNAYMKIVLHALKHKSSAVNAVLLGRVSPTNNVVEITDSVPLFHSHLGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120
           PQLEISL+LIEE+YAAKG+NIVGYFHANERFDDYE+ GVAKN+GDHI R+FP AA+LLLD
Sbjct: 61  PQLEISLILIEEHYAAKGVNIVGYFHANERFDDYELSGVAKNVGDHIYRYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180
           ++KLEALPK KDRSPVM+LYT+++SKNWKLAG +GSSQL +KEPSAN VLLD IS+EKWQ
Sbjct: 121 NKKLEALPKGKDRSPVMQLYTRDSSKNWKLAGGEGSSQLTIKEPSANAVLLDHISTEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004144311.11.2e-110100.00PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KG... [more]
XP_008455761.12.9e-10998.52PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo][more]
XP_022950917.13.3e-10594.09ER membrane protein complex subunit 8/9 homolog [Cucurbita moschata][more]
XP_023543492.12.2e-10493.10ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo][more]
XP_022966460.11.4e-10394.09ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G55940.12.2e-8271.64Uncharacterised protein family (UPF0172)[more]
AT5G51620.22.2e-1077.78Uncharacterised protein family (UPF0172)[more]
Match NameE-valueIdentityDescription
sp|Q9FG71|EMC89_ARATH3.9e-8171.64ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9DB76|EMC9_MOUSE5.2e-2535.57ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1[more]
sp|Q5U1W7|EMC9_RAT7.4e-2434.54ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2... [more]
sp|Q9Y3B6|EMC9_HUMAN2.8e-2334.02ER membrane protein complex subunit 9 OS=Homo sapiens OX=9606 GN=EMC9 PE=1 SV=3[more]
sp|Q5FVL2|EMC8_RAT2.4e-2231.22ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KYR9|A0A0A0KYR9_CUCSA7.8e-111100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=4 SV=1[more]
tr|A0A1S3C2C1|A0A1S3C2C1_CUCME1.9e-10998.52ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P5ELD8|A0A2P5ELD8_9ROSA4.0e-9181.28ER membrane protein complex subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_1... [more]
tr|A0A2P4HGN1|A0A2P4HGN1_QUESU5.2e-9179.31Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_... [more]
tr|A0A2P4L507|A0A2P4L507_QUESU2.0e-9078.82Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037518MPN
IPR005366EMC8/9
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029170.1CsaV3_4G029170.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.140.10coord: 6..125
e-value: 2.1E-6
score: 29.2
NoneNo IPR availablePANTHERPTHR12941:SF10ER MEMBRANE PROTEIN COMPLEX SUBUNIT 8/9 HOMOLOGcoord: 5..202
IPR005366ER membrane protein complex subunit 8/9PFAMPF03665UPF0172coord: 7..201
e-value: 2.8E-58
score: 197.0
IPR005366ER membrane protein complex subunit 8/9PANTHERPTHR12941ER MEMBRANE PROTEIN COMPLEXcoord: 5..202
IPR005366ER membrane protein complex subunit 8/9CDDcd08060MPN_UPF0172coord: 9..198
e-value: 3.80637E-71
score: 215.622
IPR037518MPN domainPROSITEPS50249MPNcoord: 7..146
score: 18.987