Carg13325 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13325
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ER membrane protein complex subunit 8/9 homolog
Location	Cucurbita_argyrosperma_scaffold_038 : 973006 .. 977480 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCTTCCCACTTCGCGGCTACTCTGTCCGGCTTTGCTGTGGCTGCAAACTACGTCTCGTCCTCCTCCCGTCACCGTCTCCTCCGCCGTACTCTCCGGTGTTTCACCAGCTCACTCACTCATGGGTGGCGATCTACGCTTTGAAATCTCACAAAATGCCTACATAAAGCTCGTTCTCCACGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGCATCTCCGGCTCCAATGATGTCATCGAAATTGCCGAATCTGTCCCCCTCTTCCATTCCAGCATCGGCCTCCTCCCTCAGCTTGAAATCTCTCTCCTTCTGGTACTCATTTTCATCACTTCTGCGGGAAATTTCATGTTTAGGTTTGACTGAACTAGTTGCTCATGCGAGAATTTGTTGTGTTTGATGCCGTTTTTACTGCCTTTTCACTTGCGTGTTTGAGATCTATAATTGATGAAGTCGTGGCATGATTGATTTGGAATCAGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGGTATTTTCATGCTAACGAGCGTTTTGATGATTATGATGCTGGTGGTGTCGCGAAGAATATTGCTGATCATATTTCTCGATCCTTTCCTCATGCTGCTCTTCTTTTGGTAAGATATGTCTTATTGTACTTTAACTGTAGTGATTTGTATATTTTGTTGTTTGATTCTTGCTTCTCTGCAGTTAGATCACAGAAAACTTGAAGCTTTGCCAAAGAGAAAGGATAGAAGCCCTGTAGTGGAGGTCAGTATGTCGCTATAGAATTCTTATCATGGTTTTGTTAATTGTATTTGCGTGCTTCCTTAGAATTTCCTTATTGAATGTCCGCCATAGTTTCCTCTTTTTAGTCTGTTTCAAACTGATTCAGGTGAGTGATGTTAAATGGCCAAAATGAAAATTCTGAAGTGAGATTGATGCTGATATAGCACATTGTTCTCTGGGACCAACGGCTTTGTTCAGTTTTTGTAGGGCAGTGGAACATCGTAAAAATAACTCTCTTACATCATGGATAATTCTTTCATTTACTGGGGGGAGGTTCTTATAGTTTTCCCAATTAATTGATCTAATACGACGAAAATGTCGCAAGAAATGTACGAGTCTTTAGACAATTTCTGTAACAGCCCAAGTTTACCGCTAGTAGATATTGTCCTATTTGGGCTTTCCCTTCTGAGTTTCCCCTCAGAGTTTTAAAATGCGTCTACTAGAGAGAAGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCGACGTGGGATCTCACAATTTCTTAGTTACTTTCCATTGGTGGAGACTTGATATCATTATCTCTGCTTATGCTATTTGAAATATAAAAAGAAATGTATGTTGGAGCCCTTCTCAGATTTTCTGTCCTGTTTATCTTTAAAATCCAGCAAGTAACATAAGATGCTCTGCTTGGAATTTCAGGACGGATCTTGGAGAAACATCATTTGATCATTAGAAATTTTTTGCCCAATTAAATAGTGACCCATTACACTCCTTTATTTAGTTTGCCCCTCAGCCACCAGAGTTTATGCATAACGTTTTATATCAAGGGAGAATCTTAGGTCCTATATTGTAGGAGGCACATTTGTGATGAGGAGGCAGCGGGATAGGTTTCTTTTTTCTTTATCTCTTGATTTTTGGGGGCTTCTTGGACCCTAAATAAATGATCAGAAAGTGGTTGCTTGAAGCTATGGGGTTTTCTATTGTAGATCTTTTTATAATTTTTTTGAGAAAGGATCCAAATCTTACCCATCAATAAGATTGACTTAATTTTGAAGTTAAAGATCTCAAAGAAGTTCATTGTGCAAACAGTGATTGATAGAGTGCTGTAATGGAAGCAAATACAATATCCATATGTATTGTGAACCAGTTAAAAACACCTGGATGTTCTCCTTTAATTCTTTTTCCTTTTCAACCCTTAATATGAAACTCTAGCCCATTGGATCTAAGAACCCTTGTGGATGTGCAAACCCCTAGATCACAAATGCTAAAACCCCAAGTTAAGATAATTTCATCCCAAATGATGGTATTTCTTGAGAATTCAATCTAACAACCTTTAAATCTAAAATATTCAAGAACCCCAAAACGATAAGGAATCACCCCAAGGAAAAATAAGATTTAGAATACCTTGTTGATCAAATATCTCATAGAAAAAAAAAAAATTGTTTGAGATTCGAATCACTCCACAAGCATGATTAGATAAATCATGTCAAACTTGAATGATTTTAAGCATGCACCTAAAATGAAACTTTTGCCCTTAGAATGATTCTAGCCAATTGAAACTAAATAGAATTGCGAAGATACTTAGCTCTAGGTTAAAAGAAAGCACAAATGTTTTTTGTACTGGATTTTCAAAGTCTATTTTGCGAAGACAACATACATGGTTTTATATAGTCTCAAAATGAAACTTTTGTCATTCCATATGGCATTTCAAGAGTTGTAAACTTCTTGCATATGACCGTAATGAGCCACTAGATAACGTAGATAACGGTAACCTAAAAAATAAATAAAAAATCTTAAAACTGAAAATATATTAATGAAACACCATAAATCTAGATTTCAATCATTCATCAAGAATTTGTAACCGTCTAAGAATAAATAAATTCCCACTTGAAGTATTTTGAAGCCCTCGTTGCATAAATGGAGCTCGATTCTTCTTAATGTGACATCAATTCTTACTTGAGTTCAACTTTAATGAAAGTTGACTTCACTTAGTTTGACTTGAATTTATCTTGTGGTAATCTGAACAATATTCTTCACAACTTCCTTGAAGTTCATATTGTATGATTGAGATTTCTAGGTTTATACCACTCCTAGTTGCCACTTTTGGTTCTAAATGGTAGCCAACCCTCGTAAATGGAAGCTTAGGGTCTTTTGAATGATTTAGTCATTCCCTTTTAAAATATATATATGTATAAATAAAATATACTTTGGCAAGTTGGAGGTCCTTGTATTGGTTATTATCTCGTAAACCATGGTTCAGGTTGGATGTTGGACCATCAATTTGCCCTCTCCCAACGTACATGTTTCCTTATTAGTTGATATCTGGCCTCAGAAGTGCGGAAGATCACTTGTTGAACCTTTTTTCTTTTTCAAAGGTATGCGTTAGTTGGAGGAGGTAACTATTATATGTTATCTTATTGGTCAAAAGTATTAATTTTGAGTTGAACTCCAGCGTTCATAGTTTATGACATCAATCTGGATCTGTGGCACAATCTCACCATAATTAAGACATACATCCTTCACCAAAAGTAAGTGGTTTGAGTTTTCGACACCACATGTGGTTGAACTCAACAGATAAATCTAAATATGTTAGTCAGCTCAAACCCTGGTAGTTGTTTAACATAAAAGATAAAAAGATCTCAACGTAGTCAAATTCGTTACTAAAGTTATGATGGTAAGTGTTGTTGTCAGTGGAAATTTACTTATTCTGGGATTTTGAGTGTTTTGTTTGCCAGCATCGATCCTGGTTGCTTCGCGTTCCAGTCGCTTTCCTTTTTTTTTTTTTTTTTAATATCTCCCAAGCAATTATTATTTGTTCTATCTAATGTCAAACTTGAGGTCTAAAATTACTGAGTTGTGTTGTATAAAACTTCTCTAGTATTTAGATAGTATCAAGATATTATTTCATTTTTCAAATGACTGTAGTTTCTGATGAACGATTATTCATTATCTTGGCTATCTTTTGCTGCCACTCTGTCACCTTAGGAACCCTTTTAAACTATAGGCCTTGTCTATATTGCTAGTTTCACCATGAAATAAAGTAGACCTTAAGCATGAGGAGATTGCTGCATAATGCGTTTCTTCACCATTTCGTTTGTTTCGTCTCCGATCAGCTATACACGAGGGAAACCTCCAAGAATTGGAAGTTGGCAGGATCAGATGGAAGTAGCCAGCTAACAATGAAGGAACCGTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGTACGATACACAATGTTCCCTCTCTTTTTGAATATTGCATCGATCATGAATGAGCAACTGTTAAACTTTATTGTCTTAAACCTTGAAAATTTGCAGGGATTGGTTGAACCCAGACCTGTTCAAGTAGAAGATCTTTTCCCGTAGTTGCAATCCGTGATTGCTCTAGAAAGGATTAGTTGGAAACTGGAGGCTTGTGCTTTTCAAGGTTTGAGAATGTTAATGGTTGAATTTTATTTTGTTAGACTTAAATTACATGTCTTTGATTCGAATAAAATCTCAGTCTTGAAATTGAAATTGAAGTCCTGTTTCTTTTAGTGTTTTAAATTGAAGGAATTGTTTGGATGTATGCTAACATATTGCCATTTTTGGTTGAATTCTAGGTAACTTTTATCTTAATAAAGGTAAATTTCTCTATTTTTTAAATTAGGGTT

mRNA sequence

TCTTTCTTCCCACTTCGCGGCTACTCTGTCCGGCTTTGCTGTGGCTGCAAACTACGTCTCGTCCTCCTCCCGTCACCGTCTCCTCCGCCGTACTCTCCGGTGTTTCACCAGCTCACTCACTCATGGGTGGCGATCTACGCTTTGAAATCTCACAAAATGCCTACATAAAGCTCGTTCTCCACGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGCATCTCCGGCTCCAATGATGTCATCGAAATTGCCGAATCTGTCCCCCTCTTCCATTCCAGCATCGGCCTCCTCCCTCAGCTTGAAATCTCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGGTATTTTCATGCTAACGAGCGTTTTGATGATTATGATGCTGGTGGTGTCGCGAAGAATATTGCTGATCATATTTCTCGATCCTTTCCTCATGCTGCTCTTCTTTTGTTAGATCACAGAAAACTTGAAGCTTTGCCAAAGAGAAAGGATAGAAGCCCTGTAGTGGAGCTATACACGAGGGAAACCTCCAAGAATTGGAAGTTGGCAGGATCAGATGGAAGTAGCCAGCTAACAATGAAGGAACCGTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGGATTGGTTGAACCCAGACCTGTTCAAGTAGAAGATCTTTTCCCGTAGTTGCAATCCGTGATTGCTCTAGAAAGGATTAGTTGGAAACTGGAGGCTTGTGCTTTTCAAGGTTTGAGAATGTTAATGGTTGAATTTTATTTTGTTAGACTTAAATTACATGTCTTTGATTCGAATAAAATCTCAGTCTTGAAATTGAAATTGAAGTCCTGTTTCTTTTAGTGTTTTAAATTGAAGGAATTGTTTGGATGTATGCTAACATATTGCCATTTTTGGTTGAATTCTAGGTAACTTTTATCTTAATAAAGGTAAATTTCTCTATTTTTTAAATTAGGGTT

Coding sequence (CDS)

ATGGGTGGCGATCTACGCTTTGAAATCTCACAAAATGCCTACATAAAGCTCGTTCTCCACGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGCATCTCCGGCTCCAATGATGTCATCGAAATTGCCGAATCTGTCCCCCTCTTCCATTCCAGCATCGGCCTCCTCCCTCAGCTTGAAATCTCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGGTATTTTCATGCTAACGAGCGTTTTGATGATTATGATGCTGGTGGTGTCGCGAAGAATATTGCTGATCATATTTCTCGATCCTTTCCTCATGCTGCTCTTCTTTTGTTAGATCACAGAAAACTTGAAGCTTTGCCAAAGAGAAAGGATAGAAGCCCTGTAGTGGAGCTATACACGAGGGAAACCTCCAAGAATTGGAAGTTGGCAGGATCAGATGGAAGTAGCCAGCTAACAATGAAGGAACCGTCAGCAAACGTGGTCCTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGGATTGGTTGAACCCAGACCTGTTCAAGTAG

Protein sequence

MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDHRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQDVVDFDDHLDDISKDWLNPDLFK

Homology

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BLAST of Carg13325 vs. NCBI nr
Match: XP_022966460.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 1.6e-107
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLSIVGYFHAN RFDDYD GGVAKNIADHISRSFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANVRFDDYDVGGVAKNIADHISRSFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Carg13325 vs. NCBI nr
Match: XP_023518172.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 1.0e-106
Identity = 199/203 (98.03%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYD GGVAKNIADHISRSFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDVGGVAKNIADHISRSFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLT+KEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTIKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
            V+DFDDHLDDISKDWLNPDLFK
Sbjct: 181 GVMDFDDHLDDISKDWLNPDLFK 203

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BLAST of Carg13325 vs. NCBI nr
Match: XP_022925195.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 1.8e-106
Identity = 199/203 (98.03%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYD  GVAKNIADHISRSFPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDVVGVAKNIADHISRSFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVV+LDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVMLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPNLFK 203

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BLAST of Carg13325 vs. NCBI nr
Match: XP_004144311.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KGN54668.1 hypothetical protein Csa_4G419600 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 2.4e-103
Identity = 191/203 (94.09%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRT+AVNGVLLGRISG NDVIEI++SVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGL+IVGYFHANERFDDY+ GGVAKNI DHISR FPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGSSQL MKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Carg13325 vs. NCBI nr
Match: XP_008455761.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo])

HSP 1 Score: 382.5 bits (981), Expect = 9.0e-103
Identity = 190/203 (93.60%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHR+SAVNGVLLGRISG NDVIEI++SVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGL+IVGYFHANERFDDY+ GGVAKNI DHISR FPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGSSQL +KEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Carg13325 vs. TAIR10
Match: AT5G55940.1 (Uncharacterised protein family (UPF0172))

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-78
Identity = 139/201 (69.15%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 3   GDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSND-VIEIAESVPLFHSSIGLLP 62
           G+L++EISQNAYIKLVLH+L+H+T+AVNGVL+GRIS  +D V+EI++SVPLFHS++ LLP
Sbjct: 7   GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLP 66

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDH 122
            LEISL++IEE+Y A+GLSIVGYFHANERFDD +  GVAKNI DHISR FP A +LLL++
Sbjct: 67  PLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNN 126

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQD 182
           +KLEAL K K+RSPV++L  ++ SKNW++ G+DG S+L +KEPSANVVL D+ISSEKW+D
Sbjct: 127 KKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKD 186

Query: 183 VVDFDDHLDDISKDWLNPDLF 203
           V D DDHLDD++KDWLNP LF
Sbjct: 187 VTDVDDHLDDVTKDWLNPGLF 207

[Close]

BLAST of Carg13325 vs. TAIR10
Match: AT5G51620.2 (Uncharacterised protein family (UPF0172))

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 69  LIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNI 104
           +IEE+Y A+GLSIVGYFHANERFDD +  GVAKNI
Sbjct: 1   MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNI 35

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BLAST of Carg13325 vs. Swiss-Prot
Match: sp|Q9FG71|EMC89_ARATH (ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 GN=EMB2731 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.6e-77
Identity = 139/201 (69.15%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 3   GDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSND-VIEIAESVPLFHSSIGLLP 62
           G+L++EISQNAYIKLVLH+L+H+T+AVNGVL+GRIS  +D V+EI++SVPLFHS++ LLP
Sbjct: 7   GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLP 66

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDH 122
            LEISL++IEE+Y A+GLSIVGYFHANERFDD +  GVAKNI DHISR FP A +LLL++
Sbjct: 67  PLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNN 126

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQD 182
           +KLEAL K K+RSPV++L  ++ SKNW++ G+DG S+L +KEPSANVVL D+ISSEKW+D
Sbjct: 127 KKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKD 186

Query: 183 VVDFDDHLDDISKDWLNPDLF 203
           V D DDHLDD++KDWLNP LF
Sbjct: 187 VTDVDDHLDDVTKDWLNPGLF 207

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BLAST of Carg13325 vs. Swiss-Prot
Match: sp|Q9DB76|EMC9_MOUSE (ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 0


Query: 8   EISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLPQLEISL 67
           EIS  AY K+ LHA ++  +AVNG+LL   +GS + + + + VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDHRKLEAL 127
             ++ + A  GL + GY+HAN   DD   G +A  IA  I+  FP A L++LD++KL   
Sbjct: 65  NQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTR 124

Query: 128 PKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

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BLAST of Carg13325 vs. Swiss-Prot
Match: sp|Q5U1W7|EMC9_RAT (ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-23
Identity = 67/194 (34.54%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 8   EISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLPQLEISL 67
           EIS  AY K+ LHA ++  +AVNG+LL   + S + + + + VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDHRKLEAL 127
             ++ +    GL + GY+HAN   DD   G +A  IA  I+  FP+A L++LD++KL   
Sbjct: 65  NQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTW 124

Query: 128 PKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

[Close]

BLAST of Carg13325 vs. Swiss-Prot
Match: sp|Q5FVL2|EMC8_RAT (ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 63/204 (30.88%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 8   EISQNAYIKLVLHALKHRTSAVNGVLLGRIS--------GSNDVIEIAESVPLFHSSIGL 67
           +++  AY K+VLH  K+   AVNG+L+            G+ +     + +PLFH ++ L
Sbjct: 5   KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLAL 64

Query: 68  LPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLL 127
            P LE++L LI+ +       I GY+ ANER  D     VA+ +A  I+  F  AAL+++
Sbjct: 65  TPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIMV 124

Query: 128 DHRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKW 187
           D+ K          +P + +Y +  ++ W+    D         P A  +    + S  +
Sbjct: 125 DNAKF----TMDCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSY 184

Query: 188 QDVVDFDDHLDDISKDWLNPDLFK 204
           + +VDFD+HLDDI  DW NP++ K
Sbjct: 185 ETLVDFDNHLDDIRSDWTNPEINK 201

[Close]

BLAST of Carg13325 vs. Swiss-Prot
Match: sp|Q9Y3B6|EMC9_HUMAN (ER membrane protein complex subunit 9 OS=Homo sapiens OX=9606 GN=EMC9 PE=1 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 66/194 (34.02%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 8   EISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLPQLEISL 67
           EIS  AY+K+ LHA ++  +AVNG+ L     S + + + + VPLFHS + L   LE++L
Sbjct: 5   EISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 68  LLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDHRKLEAL 127
             ++ + A  GL + GY+HAN   +D   G +A  IA  I+  FP A L++LD++KL   
Sbjct: 65  NQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQ 124

Query: 128 PKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQDVVDFDD 187
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDC 184

Query: 188 HLDDISKDWLNPDL 202
           HLDDI +DW N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

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BLAST of Carg13325 vs. TrEMBL
Match: tr|A0A0A0KYR9|A0A0A0KYR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.6e-103
Identity = 191/203 (94.09%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHRT+AVNGVLLGRISG NDVIEI++SVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGL+IVGYFHANERFDDY+ GGVAKNI DHISR FPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGSSQL MKEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Carg13325 vs. TrEMBL
Match: tr|A0A1S3C2C1|A0A1S3C2C1_CUCME (ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC103495860 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.9e-103
Identity = 190/203 (93.60%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGGDLRFEISQNAYIKLVLHALKHR+SAVNGVLLGRISG NDVIEI++SVPLFHSSIGLL
Sbjct: 1   MGGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISLLLIEEYYAAKGL+IVGYFHANERFDDY+ GGVAKNI DHISR FPHAALLLLD
Sbjct: 61  PQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           HRKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGSSQL +KEPSANVVLLDFISSEKWQ
Sbjct: 121 HRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNPDLFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Carg13325 vs. TrEMBL
Match: tr|A0A2P4HGN1|A0A2P4HGN1_QUESU (Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_61558 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88
Identity = 159/203 (78.33%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGG+ R+EI+QNAY+K+VLHALKH++SAVN VLLGR+S +NDV+EI +SVPLFHS +GLL
Sbjct: 1   MGGEWRYEIAQNAYMKIVLHALKHKSSAVNAVLLGRVSPTNDVVEITDSVPLFHSHLGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISL+LIEE+YAAKG++IVGYFHANERFDDY+  GVAKN+ DHI R FP AA+LLLD
Sbjct: 61  PQLEISLILIEEHYAAKGVNIVGYFHANERFDDYELSGVAKNVGDHIYRYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           ++KLEALPK KDRSPV++LYTR++SKNWKLAG +GSSQLT+KEPSAN VLLD IS+EKWQ
Sbjct: 121 NKKLEALPKGKDRSPVMQLYTRDSSKNWKLAGGEGSSQLTIKEPSANAVLLDHISTEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

[Close]

BLAST of Carg13325 vs. TrEMBL
Match: tr|A0A2P4L507|A0A2P4L507_QUESU (Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_77265 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 5.4e-88
Identity = 158/203 (77.83%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGG+ R+EI+QNAY+K+VLHALKH++SAVN VLLGR+S +N+V+EI +SVPLFHS +GLL
Sbjct: 1   MGGEWRYEIAQNAYMKIVLHALKHKSSAVNAVLLGRVSPTNNVVEITDSVPLFHSHLGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISL+LIEE+YAAKG++IVGYFHANERFDDY+  GVAKN+ DHI R FP AA+LLLD
Sbjct: 61  PQLEISLILIEEHYAAKGVNIVGYFHANERFDDYELSGVAKNVGDHIYRYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           ++KLEALPK KDRSPV++LYTR++SKNWKLAG +GSSQLT+KEPSAN VLLD IS+EKWQ
Sbjct: 121 NKKLEALPKGKDRSPVMQLYTRDSSKNWKLAGGEGSSQLTIKEPSANAVLLDHISTEKWQ 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

[Close]

BLAST of Carg13325 vs. TrEMBL
Match: tr|A0A2N9HXE4|A0A2N9HXE4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44667 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.7e-87
Identity = 156/203 (76.85%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLL 60
           MGG+ ++EI+QNAYIKLVLHALKH++SAVN VLLGR+S  NDV+EI +SVPLFH+ +GLL
Sbjct: 1   MGGESKYEIAQNAYIKLVLHALKHKSSAVNAVLLGRVSPQNDVVEITDSVPLFHTHLGLL 60

Query: 61  PQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLD 120
           PQLEISL+LIEE+YAAKG++IVGYFHANERFDD++  GVAKN+ DHI R FP AA+LLLD
Sbjct: 61  PQLEISLILIEEHYAAKGVNIVGYFHANERFDDHELSGVAKNVGDHIYRYFPQAAILLLD 120

Query: 121 HRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQ 180
           ++KL+ALPK KDRSP V+LYTR++SKNWKL+G DGSSQL +KEPSANVVLLD+IS+EKW+
Sbjct: 121 NKKLDALPKGKDRSPAVQLYTRDSSKNWKLSGGDGSSQLNIKEPSANVVLLDYISTEKWK 180

Query: 181 DVVDFDDHLDDISKDWLNPDLFK 204
           DVVDFDDHLDDISKDWLNP+LFK
Sbjct: 181 DVVDFDDHLDDISKDWLNPELFK 203

The following BLAST results are available for this feature:

BLAST of Carg13325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966460.1	1.6e-107	99.01	ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima]	[more]
XP_023518172.1	1.0e-106	98.03	ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022925195.1	1.8e-106	98.03	ER membrane protein complex subunit 8/9 homolog [Cucurbita moschata]	[more]
XP_004144311.1	2.4e-103	94.09	PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KG...	[more]
XP_008455761.1	9.0e-103	93.60	PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo]	[more]

BLAST of Carg13325 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55940.1	1.4e-78	69.15	Uncharacterised protein family (UPF0172)	[more]
AT5G51620.2	2.4e-09	77.14	Uncharacterised protein family (UPF0172)	[more]

BLAST of Carg13325 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FG71\|EMC89_ARATH	2.6e-77	69.15	ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9DB76\|EMC9_MOUSE	2.0e-24	35.57	ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1	[more]
sp\|Q5U1W7\|EMC9_RAT	2.8e-23	34.54	ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2...	[more]
sp\|Q5FVL2\|EMC8_RAT	1.1e-22	30.88	ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2...	[more]
sp\|Q9Y3B6\|EMC9_HUMAN	1.1e-22	34.02	ER membrane protein complex subunit 9 OS=Homo sapiens OX=9606 GN=EMC9 PE=1 SV=3	[more]

BLAST of Carg13325 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYR9\|A0A0A0KYR9_CUCSA	1.6e-103	94.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=4 SV=1	[more]
tr\|A0A1S3C2C1\|A0A1S3C2C1_CUCME	5.9e-103	93.60	ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4HGN1\|A0A2P4HGN1_QUESU	1.4e-88	78.33	Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_...	[more]
tr\|A0A2P4L507\|A0A2P4L507_QUESU	5.4e-88	77.83	Er membrane protein complex subunit 8/9 like OS=Quercus suber OX=58331 GN=CFP56_...	[more]
tr\|A0A2N9HXE4\|A0A2N9HXE4_FAGSY	2.7e-87	76.85	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44667 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037518	MPN
IPR005366	EMC8/9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13325-RA	Carg13325-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 6..120 e-value: 2.8E-5 score: 25.5
None	No IPR available	PANTHER	PTHR12941:SF10	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 8/9 HOMOLOG	coord: 5..202
IPR005366	ER membrane protein complex subunit 8/9	PFAM	PF03665	UPF0172	coord: 7..201 e-value: 1.5E-58 score: 197.9
IPR005366	ER membrane protein complex subunit 8/9	PANTHER	PTHR12941	ER MEMBRANE PROTEIN COMPLEX	coord: 5..202
IPR005366	ER membrane protein complex subunit 8/9	CDD	cd08060	MPN_UPF0172	coord: 9..198 e-value: 3.67355E-70 score: 213.311
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 7..146 score: 17.939

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13325	Cla012072	Watermelon (97103) v1	carwmB0577
Carg13325	Csa4G419600	Cucumber (Chinese Long) v2	carcuB0609
Carg13325	MELO3C019145	Melon (DHL92) v3.5.1	carmeB0585
Carg13325	ClCG04G005970	Watermelon (Charleston Gray)	carwcgB0566
Carg13325	CSPI04G18800	Wild cucumber (PI 183967)	carcpiB0615
Carg13325	Cucsa.358660	Cucumber (Gy14) v1	carcgyB0659
Carg13325	CmaCh07G011130	Cucurbita maxima (Rimu)	carcmaB0818
Carg13325	CmaCh03G001650	Cucurbita maxima (Rimu)	carcmaB0812
Carg13325	CmoCh07G011610	Cucurbita moschata (Rifu)	carcmoB0795
Carg13325	CmoCh03G001940	Cucurbita moschata (Rifu)	carcmoB0789
Carg13325	Lsi01G017470	Bottle gourd (USVL1VR-Ls)	carlsiB527
Carg13325	Cp4.1LG10g10670	Cucurbita pepo (Zucchini)	carcpeB0827
Carg13325	Cp4.1LG19g02450	Cucurbita pepo (Zucchini)	carcpeB0830
Carg13325	CsGy4G017860	Cucumber (Gy14) v2	carcgybB0583
Carg13325	MELO3C019145.2	Melon (DHL92) v3.6.1	carmedB0592
Carg13325	CsaV3_4G029170	Cucumber (Chinese Long) v3	carcucB0616
Carg13325	Cla97C04G072540	Watermelon (97103) v2	carwmbB0606
Carg13325	Bhi03G002082	Wax gourd	carwgoB0694

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None