CsaV3_4G028360 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTAGTGCAGCCATATTAATATTAAATACAAGAAAAACATCTGTCCCCCATTCTTGCATGTGTTGAGTGACATGCTTTGATTGACTAACAGATAAGCCATTTAGATCCATACTCCAAATTTTCAATTTTCAATCATCTATATAAATCTCATTCACTTCCTATCACATTCCATTATTTCACTTCACACCTAAATCAAAAACACCACCCAAAAAAGAAAAAGAAAAAAACCATTCTTTCAATTTCAATTCTTATTTCCTACCTATTTCTGTTCTTCCAAATTTGGGGATTTCATAAATGGTGAAGAAAGTCGAGAAGACGGCGGTCGAATCATCTCTGGCGCCACCGCCTCCGCCGTTTAAGAAGAAGTATAAGGGTGTTAGAATGAGGAGCTGGGGTTCATGGGTATCTGAAATTCGAGCGCCGAATCAGAAGACCAGGATTTGGTTAGGGTCTTATTCAACGCCGGAAGCAGCCGCGCGTGCTTACGACGCTGCACTTTTGTGTCTTAAAGGCGCTTCCGCCAGCCTCAACTTCCCGGAAATTGCTAACTCCATTCAAATTTTCGACAACAACAGTCACTTCCGCCGCCACCACCACCACATTCATACCTCCGACGATGCCATTATGTCTCCCAAATCCATCCAACGTTTCGCCGCCGCCGCCGCCAATGGCTTCCCAGATAATGTCGGCACGGTCGTCACTCCTCCGTCCTCCGCCGTATCTTCGCCGTCGACGTCGACATCTTCCACACCGTCTGATCAGCCTGAAGATGAGATGTCGGTCATTGTGACATCCGATGGTTTTTACAATGAATTCGATCAACCGACGGCAGAAATGGAATCTTGGTGCAATTACTTTGATGCCCTTCAGTCACCGAAGTACATTGACCAAATATTTACCGACGGTTGGCTTGATTTTGATTCCATGGCTGAGGGTAAAATGGATCATTTTGAGGAAGAAGAAAGTGACATCAGATTGTGGAGCTTCTGCTGAAGAAAGGGTATACCAGAAAAAGTAAAAATTATCTTTACTTCATTTCTACATTATATTATATTTCTTTTAAAAATCTTCGTAAATTTCTTGAAGATATTACTGACCGTGACCAAAAATATGATGTTTTTCTTTTCAATTAACCAACGAACTCACATGAGATTTGGACTTTTTTTTTTTCTTCCAAACTAATCTCTGTACACGTTGGTTTTATGATGAAAAACGTTAATGTAATTTTTGTAATGAGTAATCATTGTTATTAATTGTTAATTATATTATAATTATTATATTAATGGAAATGTTAATTCATAATTGTTCTTCTATTGAGTGATTAATTATGTTCATCGCCGTCGGTGTCTATATAATATATGAGAAGCGGCGTAATGTAAAACATATAGGTGGAGATCTTAAAAGAGGCCTAATTTTTTTAAAAACTTCTATTAAATTCCTCAGGTAAG ATGGTGAAGAAAGTCGAGAAGACGGCGGTCGAATCATCTCTGGCGCCACCGCCTCCGCCGTTTAAGAAGAAGTATAAGGGTGTTAGAATGAGGAGCTGGGGTTCATGGGTATCTGAAATTCGAGCGCCGAATCAGAAGACCAGGATTTGGTTAGGGTCTTATTCAACGCCGGAAGCAGCCGCGCGTGCTTACGACGCTGCACTTTTGTGTCTTAAAGGCGCTTCCGCCAGCCTCAACTTCCCGGAAATTGCTAACTCCATTCAAATTTTCGACAACAACAGTCACTTCCGCCGCCACCACCACCACATTCATACCTCCGACGATGCCATTATGTCTCCCAAATCCATCCAACGTTTCGCCGCCGCCGCCGCCAATGGCTTCCCAGATAATGTCGGCACGGTCGTCACTCCTCCGTCCTCCGCCGTATCTTCGCCGTCGACGTCGACATCTTCCACACCGTCTGATCAGCCTGAAGATGAGATGTCGGTCATTGTGACATCCGATGGTTTTTACAATGAATTCGATCAACCGACGGCAGAAATGGAATCTTGGTGCAATTACTTTGATGCCCTTCAGTCACCGAAGTACATTGACCAAATATTTACCGACGGTTGGCTTGATTTTGATTCCATGGCTGAGGGTAAAATGGATCATTTTGAGGAAGAAGAAAGTGACATCAGATTGTGGAGCTTCTGCTGA ATGGTGAAGAAAGTCGAGAAGACGGCGGTCGAATCATCTCTGGCGCCACCGCCTCCGCCGTTTAAGAAGAAGTATAAGGGTGTTAGAATGAGGAGCTGGGGTTCATGGGTATCTGAAATTCGAGCGCCGAATCAGAAGACCAGGATTTGGTTAGGGTCTTATTCAACGCCGGAAGCAGCCGCGCGTGCTTACGACGCTGCACTTTTGTGTCTTAAAGGCGCTTCCGCCAGCCTCAACTTCCCGGAAATTGCTAACTCCATTCAAATTTTCGACAACAACAGTCACTTCCGCCGCCACCACCACCACATTCATACCTCCGACGATGCCATTATGTCTCCCAAATCCATCCAACGTTTCGCCGCCGCCGCCGCCAATGGCTTCCCAGATAATGTCGGCACGGTCGTCACTCCTCCGTCCTCCGCCGTATCTTCGCCGTCGACGTCGACATCTTCCACACCGTCTGATCAGCCTGAAGATGAGATGTCGGTCATTGTGACATCCGATGGTTTTTACAATGAATTCGATCAACCGACGGCAGAAATGGAATCTTGGTGCAATTACTTTGATGCCCTTCAGTCACCGAAGTACATTGACCAAATATTTACCGACGGTTGGCTTGATTTTGATTCCATGGCTGAGGGTAAAATGGATCATTTTGAGGAAGAAGAAAGTGACATCAGATTGTGGAGCTTCTGCTGA MVKKVEKTAVESSLAPPPPPFKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGASASLNFPEIANSIQIFDNNSHFRRHHHHIHTSDDAIMSPKSIQRFAAAAANGFPDNVGTVVTPPSSAVSSPSTSTSSTPSDQPEDEMSVIVTSDGFYNEFDQPTAEMESWCNYFDALQSPKYIDQIFTDGWLDFDSMAEGKMDHFEEEESDIRLWSFC
BLAST of CsaV3_4G028360 vs. NCBI nr
Match: XP_004142694.1 (PREDICTED: ethylene-responsive transcription factor ERF014-like [Cucumis sativus] >KGN54577.1 hypothetical protein Csa_4G370550 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 4.6e-103 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. NCBI nr
Match: XP_008444140.1 (PREDICTED: ethylene-responsive transcription factor ERF014 [Cucumis melo]) HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87 Identity = 197/235 (83.83%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. NCBI nr
Match: XP_022981053.1 (ethylene-responsive transcription factor ERF014-like [Cucurbita maxima]) HSP 1 Score: 270.4 bits (690), Expect = 5.7e-69 Identity = 148/233 (63.52%), Postives = 163/233 (69.96%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. NCBI nr
Match: XP_022941107.1 (ethylene-responsive transcription factor ERF014-like [Cucurbita moschata]) HSP 1 Score: 269.6 bits (688), Expect = 9.7e-69 Identity = 149/233 (63.95%), Postives = 163/233 (69.96%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. NCBI nr
Match: XP_023525576.1 (ethylene-responsive transcription factor ERF014-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 267.7 bits (683), Expect = 3.7e-68 Identity = 148/233 (63.52%), Postives = 163/233 (69.96%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TAIR10
Match: AT1G21910.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 131.3 bits (329), Expect = 7.5e-31 Identity = 85/208 (40.87%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TAIR10
Match: AT1G77640.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 122.5 bits (306), Expect = 3.5e-28 Identity = 64/99 (64.65%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TAIR10
Match: AT1G44830.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26 Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TAIR10
Match: AT4G36900.1 (related to AP2 10) HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21 Identity = 48/88 (54.55%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TAIR10
Match: AT2G23340.1 (DREB and EAR motif protein 3) HSP 1 Score: 98.6 bits (244), Expect = 5.4e-21 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. Swiss-Prot
Match: sp|Q9SFE4|ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana OX=3702 GN=ERF012 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29 Identity = 85/208 (40.87%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. Swiss-Prot
Match: sp|Q9CAP4|ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana OX=3702 GN=ERF013 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.3e-27 Identity = 64/99 (64.65%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. Swiss-Prot
Match: sp|Q9LPE8|ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana OX=3702 GN=ERF014 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-25 Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. Swiss-Prot
Match: sp|Q9SW63|RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.5e-20 Identity = 48/88 (54.55%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. Swiss-Prot
Match: sp|O22174|ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.7e-20 Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TrEMBL
Match: tr|A0A0A0L1W9|A0A0A0L1W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G370550 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 3.1e-103 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TrEMBL
Match: tr|A0A1S3BAF2|A0A1S3BAF2_CUCME (ethylene-responsive transcription factor ERF014 OS=Cucumis melo OX=3656 GN=LOC103487575 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.8e-87 Identity = 197/235 (83.83%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TrEMBL
Match: tr|C9WA64|C9WA64_SOYBN (AP2 domain-containing transcription factor 6 OS=Glycine max OX=3847 GN=AP2-6 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.7e-45 Identity = 127/239 (53.14%), Postives = 153/239 (64.02%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TrEMBL
Match: tr|K7KM79|K7KM79_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G251400 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 129/239 (53.97%), Postives = 154/239 (64.44%), Query Frame = 0
BLAST of CsaV3_4G028360 vs. TrEMBL
Match: tr|A0A0D2QGY0|A0A0D2QGY0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G220900 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.1e-42 Identity = 116/233 (49.79%), Postives = 133/233 (57.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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