Cp4.1LG13g04690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g04690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor ERF012 family
LocationCp4.1LG13 : 5907136 .. 5907660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGAAGGAATTAGGTAAGGATCATCATCAGCCAACAGCTTCAGCAAGTAAAAGTAAATACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTTTCTGAAATTAGACCCCCAAATCAAAAGGCTAGAATATGGTTAGGTTCATATCCCACGGCGGAGGCCGCCGCCAGAGCCTACAACGCCGCCCTCTTGTGCCTCAAAGACTCCGCCGCCACTCTCATGTCTCCAAAGTCCATCAAAAGAGTCGCCGCGGAAGCCGCTGCCAATGCTGCCTCCTTTGACGGATATGTTGAGAACAAGGTTGGATCGATCGATGTCCCGTTATCGCCACGGTCTTCTTCCTCCTCCTCCGTTCCATCAACGTCGAATAACGATTCGATTATGACAATGGAGCCGTTGTGGTTTAACTTTGATGACATAGTCACCCCGAAGTACATTGAGCATATGATGGATGGGACTCTATTTGATCCACCCATTGTTGATGAAGAAAATGATATTCGTTTATGGAGCTTCTATTGA

mRNA sequence

ATGGTGAAGAAGGAATTAGGTAAGGATCATCATCAGCCAACAGCTTCAGCAAGTAAAAGTAAATACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTTTCTGAAATTAGACCCCCAAATCAAAAGGCTAGAATATGGTTAGGTTCATATCCCACGGCGGAGGCCGCCGCCAGAGCCTACAACGCCGCCCTCTTGTGCCTCAAAGACTCCGCCGCCACTCTCATGTCTCCAAAGTCCATCAAAAGAGTCGCCGCGGAAGCCGCTGCCAATGCTGCCTCCTTTGACGGATATGTTGAGAACAAGGTTGGATCGATCGATGTCCCGTTATCGCCACGGTCTTCTTCCTCCTCCTCCGTTCCATCAACGTCGAATAACGATTCGATTATGACAATGGAGCCGTTGTGGTTTAACTTTGATGACATAGTCACCCCGAAGTACATTGAGCATATGATGGATGGGACTCTATTTGATCCACCCATTGTTGATGAAGAAAATGATATTCGTTTATGGAGCTTCTATTGA

Coding sequence (CDS)

ATGGTGAAGAAGGAATTAGGTAAGGATCATCATCAGCCAACAGCTTCAGCAAGTAAAAGTAAATACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTTTCTGAAATTAGACCCCCAAATCAAAAGGCTAGAATATGGTTAGGTTCATATCCCACGGCGGAGGCCGCCGCCAGAGCCTACAACGCCGCCCTCTTGTGCCTCAAAGACTCCGCCGCCACTCTCATGTCTCCAAAGTCCATCAAAAGAGTCGCCGCGGAAGCCGCTGCCAATGCTGCCTCCTTTGACGGATATGTTGAGAACAAGGTTGGATCGATCGATGTCCCGTTATCGCCACGGTCTTCTTCCTCCTCCTCCGTTCCATCAACGTCGAATAACGATTCGATTATGACAATGGAGCCGTTGTGGTTTAACTTTGATGACATAGTCACCCCGAAGTACATTGAGCATATGATGGATGGGACTCTATTTGATCCACCCATTGTTGATGAAGAAAATGATATTCGTTTATGGAGCTTCTATTGA

Protein sequence

MVKKELGKDHHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAATLMSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSSSSSVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEHMMDGTLFDPPIVDEENDIRLWSFY
Homology
[Close]
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match: ERF13_ARATH (Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 79/176 (44.89%), Postives = 100/176 (56.82%), Query Frame = 1 

Query: 11  HQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 70
           HQ   +  K KYKGVRMRSWGSWV+EIR PNQK RIWLGSY TAEAAARAY+AALLCLK 
Sbjct: 33  HQSCKNKIK-KYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKG 92

Query: 71  SAA--------------------TLMSPKSIKRVAAEAAANAASF-----DGYVENKVGS 130
             A                    TL+SPKSI++VAA+AA +++       D    +    
Sbjct: 93  PKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDHDDG 152

Query: 131 IDVPLSPRSSSSSSVPSTS-NNDSIMTMEPLWFNFDDIVTPKYIEH--MMDGTLFD 159
           +D   S  SS++SS P    +ND    +  L  +F D     Y EH  +MD +L++
Sbjct: 153 LDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVD-----YNEHVSLMDPSLYE 202

[Close]
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 77/190 (40.53%), Postives = 96/190 (50.53%), Query Frame = 1 

Query: 14  TASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAA 73
           ++S    KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAARAY+AALLCLK S+A
Sbjct: 27  SSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSA 86

Query: 74  TLM-------------------SPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRS 133
             +                   +  S K +   AAA AA+      + V +    LS  S
Sbjct: 87  NNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAANTDPSSSSVSTSSPLLSSPS 146

Query: 134 SSSSSVPSTSNNDSIMTM--EPLWFN---------FDDIVTPKYIEHMMDGTLFDPPIVD 174
                V S S  D  +++     W+N         F + V+  Y+   +    F      
Sbjct: 147 EDLYDVVSMSQYDQQVSLSESSSWYNCFDGDDQFMFINGVSAPYLTTSLSDDFF------ 206

[Close]
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.6e-19
Identity = 72/183 (39.34%), Postives = 87/183 (47.54%), Query Frame = 1 

Query: 21  KYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAATLMSPKS 80
           KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAARAY+ ALLCLK   A L  P S
Sbjct: 49  KYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTS 108

Query: 81  I------------------KRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSSSSSVPS 140
                              K +   AA  A SF+ +      ++  P          + S
Sbjct: 109 SSSHHLLDNLLDENTLLSPKSIQRVAAQAANSFNHFAPTS-SAVSSPSDHDHHHDDGMQS 168

Query: 141 -----TSNNDSIMTMEPLWFN-------FDDIVTPKYIEHMMDGTLFDPPIVDEENDIRL 174
                  N+ S+M     W++       FD+     Y   +   T+ D     E+ DI L
Sbjct: 169 LMGSFVDNHVSLMDSTSSWYDDHNGMFLFDNGAPFNYSPQLNSTTMLDEYFY-EDADIPL 228

[Close]
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-16
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 1 

Query: 1   MVKKELGKDHHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARA 60
           MVK+ + K+  +   +A +SKYKGVR R WG WVSEIR P+ + RIWLGSY T E AARA
Sbjct: 1   MVKQAM-KEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARA 60

Query: 61  YNAALLCLKDSAATLMSPKSIKRVAAE-----------AAANAASFDGYVENKVGSIDVP 120
           ++AA  CL+   A    P +   ++ E           AA  A +F   V+ +  S  VP
Sbjct: 61  FDAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVP 120

Query: 121 ---LSPRSSSSSSVPSTSNND---SIMTMEPLWFNFD 141
              + P S S+S+  +TS  D   S + + P+ F FD
Sbjct: 121 GSEIRPESPSTSASVATSTVDYDFSFLDLLPMNFGFD 156

[Close]
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-16
Identity = 68/182 (37.36%), Postives = 94/182 (51.65%), Query Frame = 1 

Query: 19  KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAATLMSP 78
           K  Y+G RMRSWG WVSEIR P +K+RIWLG++PTAE AARA++ A L +K S+A L  P
Sbjct: 23  KGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFP 82

Query: 79  K---------SIKRVAAEAAANAASFDGY--VENKVGSIDVPLSPR---------SSSSS 138
           +         S+ +   +AAA  A+   +  V   +     PL  R         SSSSS
Sbjct: 83  ELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDSTPLQTRCDTEKIEKWSSSSS 142

Query: 139 SVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEH----------MMDGTLFDPPIVD-EEND 170
           S  S+S++ S  +   L     DIV    +E+           ++G +  PP +D  END
Sbjct: 143 SASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYDCALYDSLEGLVSMPPWLDATEND 202

[Close]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match: A0A0A0KC86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040610 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.1e-55
Identity = 128/200 (64.00%), Postives = 143/200 (71.50%), Query Frame = 1 

Query: 1   MVKKELGKD-HHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAAR 60
           MVKKELG D +H  +   SK KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAAR
Sbjct: 1   MVKKELGNDDNHSTSVPTSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAAR 60

Query: 61  AYNAALLCLKDSAATL---------------------MSPKSIKRVAAEAAANAASFDGY 120
           AY+AALLCLK S+A L                     MSPKSI+RVAAEAAAN A FDG 
Sbjct: 61  AYDAALLCLKGSSANLNFPISSSSFAHFHNFLDDNNVMSPKSIQRVAAEAAANTAFFDGN 120

Query: 121 VE-NKVGSIDV-PLSPRSSSSSSVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEHMMDGTL 174
           V+ N  GS DV PLSP  SSSSS  STSN++S M  +P WFNFD+I++PKY+  MMD TL
Sbjct: 121 VQSNMAGSSDVPPLSPLVSSSSSSSSTSNSESFMMSDPSWFNFDEILSPKYVGQMMDWTL 180

[Close]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match: A0A0D2QGY0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G220900 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-36
Identity = 100/194 (51.55%), Postives = 122/194 (62.89%), Query Frame = 1 

Query: 13  PTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSA 72
           P++S+ K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK S+
Sbjct: 20  PSSSSCKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSS 79

Query: 73  ATL--------------MSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSSSS 132
           A+L              MSPKSI+RVAA AAAN+   +G       S   P+SP  SS  
Sbjct: 80  ASLNFPNTSLDYIPDAIMSPKSIQRVAAAAAANSFPDNGISS----STTAPVSPTPSSLV 139

Query: 133 SVPSTSNN--------------DSIMTMEPLWFNFDDIVTPKYIEHMMDGTLFDPPIV-- 174
           S PS +++              +SI  MEP + +FDD+ +PKYI+ M +   FDPP V  
Sbjct: 140 SSPSMASSPSDQVDDVSLIQSLESISMMEPWYTSFDDLQSPKYIDQMFNLVPFDPPTVMD 199

[Close]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match: A0A061FH68_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_035077 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.9e-36
Identity = 103/201 (51.24%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 13  PTASAS--KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 72
           PT+S+S  K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK 
Sbjct: 22  PTSSSSCKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKG 81

Query: 73  SAA--------------TLMSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSS 132
           S+A              T+MSPKSI+RVAA AA      + +V+N       P  P  SS
Sbjct: 82  SSANLNFPITSSHYIPDTVMSPKSIQRVAAAAA------NSFVDNATTPPISPPPPSISS 141

Query: 133 SSSVPSTS---------------------NNDSIMTMEPLWFNFDDIVTPKYIEHMMDGT 174
           SSSV S S                     N++ I  MEP W++FD + +PKYI+ M +  
Sbjct: 142 SSSVSSPSMSSSPSDQVDDDVSLMQSLVANDEPISMMEP-WYSFDSLHSPKYIDQMFNLA 201

[Close]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match: A9PLA6_POPTR (AP2 domain-containing transcription factor family protein OS=Populus trichocarpa GN=RAP2L16 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 103/198 (52.02%), Postives = 124/198 (62.63%), Query Frame = 1 

Query: 13  PTASAS--KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 72
           PT+S++  K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK 
Sbjct: 17  PTSSSACKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKG 76

Query: 73  SAATL--------------MSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSS 132
           S+A L              MSPKSI+RVAA AAAN +S D     +V S+ +P S  SSS
Sbjct: 77  SSANLNFPITSSHYIPDAVMSPKSIQRVAA-AAAN-SSEDNPTTPQVSSLPLPSSSSSSS 136

Query: 133 S-------SSVPSTSNNDSIMTMEPL------------WFNFDDIVTPKYIEHMMDGTLF 174
           S        S PS   +D +  ME              W+NFD + +PKYI+ M +G  F
Sbjct: 137 SILSSPSMVSSPSDQPDDYMSLMESFETDNEPIPMLDSWYNFDGLQSPKYIDQMFNGVSF 196

[Close]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match: M5XFW9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010649mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33
Identity = 105/213 (49.30%), Postives = 127/213 (59.62%), Query Frame = 1 

Query: 14  TASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAA 73
           +++  K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAARAY+AALLCLK S+A
Sbjct: 29  SSACKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSA 88

Query: 74  -----------------TLMSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSP--RS 133
                            T+MSPKSI+RVAA AAAN+ + D        SI  P SP  +S
Sbjct: 89  NLNFPSTASSHFIPQEITVMSPKSIQRVAA-AAANSFAIDNATTPTTTSIASPPSPPPQS 148

Query: 134 SSSSSV---PSTSNNDS------IMTMEP---------------------LWFNFDD-IV 174
           SSSSS+   PS S++ S      + + EP                     LW NFDD + 
Sbjct: 149 SSSSSLVSSPSMSSSPSDDMSSLMGSFEPYTPIYDHHDQAIDQLPMSSMELWNNFDDGLQ 208

[Close]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match: AT1G77640.1 (AT1G77640.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-23
Identity = 79/176 (44.89%), Postives = 100/176 (56.82%), Query Frame = 1 

Query: 11  HQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 70
           HQ   +  K KYKGVRMRSWGSWV+EIR PNQK RIWLGSY TAEAAARAY+AALLCLK 
Sbjct: 33  HQSCKNKIK-KYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKG 92

Query: 71  SAA--------------------TLMSPKSIKRVAAEAAANAASF-----DGYVENKVGS 130
             A                    TL+SPKSI++VAA+AA +++       D    +    
Sbjct: 93  PKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAANSSSDHFTPPSDENDHDHDDG 152

Query: 131 IDVPLSPRSSSSSSVPSTS-NNDSIMTMEPLWFNFDDIVTPKYIEH--MMDGTLFD 159
           +D   S  SS++SS P    +ND    +  L  +F D     Y EH  +MD +L++
Sbjct: 153 LDHHPSASSSAASSPPDDDHHNDDDGDLVSLMESFVD-----YNEHVSLMDPSLYE 202

[Close]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match: AT1G44830.1 (AT1G44830.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 77/190 (40.53%), Postives = 96/190 (50.53%), Query Frame = 1 

Query: 14  TASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAA 73
           ++S    KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAARAY+AALLCLK S+A
Sbjct: 27  SSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSA 86

Query: 74  TLM-------------------SPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRS 133
             +                   +  S K +   AAA AA+      + V +    LS  S
Sbjct: 87  NNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAAANTDPSSSSVSTSSPLLSSPS 146

Query: 134 SSSSSVPSTSNNDSIMTM--EPLWFN---------FDDIVTPKYIEHMMDGTLFDPPIVD 174
                V S S  D  +++     W+N         F + V+  Y+   +    F      
Sbjct: 147 EDLYDVVSMSQYDQQVSLSESSSWYNCFDGDDQFMFINGVSAPYLTTSLSDDFF------ 206

[Close]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match: AT1G21910.1 (AT1G21910.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-20
Identity = 72/183 (39.34%), Postives = 87/183 (47.54%), Query Frame = 1 

Query: 21  KYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAATLMSPKS 80
           KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAARAY+ ALLCLK   A L  P S
Sbjct: 49  KYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTS 108

Query: 81  I------------------KRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSSSSSVPS 140
                              K +   AA  A SF+ +      ++  P          + S
Sbjct: 109 SSSHHLLDNLLDENTLLSPKSIQRVAAQAANSFNHFAPTS-SAVSSPSDHDHHHDDGMQS 168

Query: 141 -----TSNNDSIMTMEPLWFN-------FDDIVTPKYIEHMMDGTLFDPPIVDEENDIRL 174
                  N+ S+M     W++       FD+     Y   +   T+ D     E+ DI L
Sbjct: 169 LMGSFVDNHVSLMDSTSSWYDDHNGMFLFDNGAPFNYSPQLNSTTMLDEYFY-EDADIPL 228

[Close]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match: AT1G74930.1 (AT1G74930.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 1 

Query: 1   MVKKELGKDHHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARA 60
           MVK+ + K+  +   +A +SKYKGVR R WG WVSEIR P+ + RIWLGSY T E AARA
Sbjct: 1   MVKQAM-KEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARA 60

Query: 61  YNAALLCLKDSAATLMSPKSIKRVAAE-----------AAANAASFDGYVENKVGSIDVP 120
           ++AA  CL+   A    P +   ++ E           AA  A +F   V+ +  S  VP
Sbjct: 61  FDAAQFCLRGGDANFNFPNNPPSISVEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVP 120

Query: 121 ---LSPRSSSSSSVPSTSNND---SIMTMEPLWFNFD 141
              + P S S+S+  +TS  D   S + + P+ F FD
Sbjct: 121 GSEIRPESPSTSASVATSTVDYDFSFLDLLPMNFGFD 156

[Close]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 68/182 (37.36%), Postives = 94/182 (51.65%), Query Frame = 1 

Query: 19  KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSAATLMSP 78
           K  Y+G RMRSWG WVSEIR P +K+RIWLG++PTAE AARA++ A L +K S+A L  P
Sbjct: 23  KGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFP 82

Query: 79  K---------SIKRVAAEAAANAASFDGY--VENKVGSIDVPLSPR---------SSSSS 138
           +         S+ +   +AAA  A+   +  V   +     PL  R         SSSSS
Sbjct: 83  ELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDSTPLQTRCDTEKIEKWSSSSS 142

Query: 139 SVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEH----------MMDGTLFDPPIVD-EEND 170
           S  S+S++ S  +   L     DIV    +E+           ++G +  PP +D  END
Sbjct: 143 SASSSSSSSSSSSSSMLSGELGDIVELPSLENNVKYDCALYDSLEGLVSMPPWLDATEND 202

[Close]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match: gi|449446436|ref|XP_004140977.1| (PREDICTED: ethylene-responsive transcription factor ERF014 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 128/200 (64.00%), Postives = 143/200 (71.50%), Query Frame = 1 

Query: 1   MVKKELGKD-HHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAAR 60
           MVKKELG D +H  +   SK KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAAR
Sbjct: 1   MVKKELGNDDNHSTSVPTSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAAR 60

Query: 61  AYNAALLCLKDSAATL---------------------MSPKSIKRVAAEAAANAASFDGY 120
           AY+AALLCLK S+A L                     MSPKSI+RVAAEAAAN A FDG 
Sbjct: 61  AYDAALLCLKGSSANLNFPISSSSFAHFHNFLDDNNVMSPKSIQRVAAEAAANTAFFDGN 120

Query: 121 VE-NKVGSIDV-PLSPRSSSSSSVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEHMMDGTL 174
           V+ N  GS DV PLSP  SSSSS  STSN++S M  +P WFNFD+I++PKY+  MMD TL
Sbjct: 121 VQSNMAGSSDVPPLSPLVSSSSSSSSTSNSESFMMSDPSWFNFDEILSPKYVGQMMDWTL 180

[Close]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match: gi|659131246|ref|XP_008465586.1| (PREDICTED: ethylene-responsive transcription factor ERF014-like [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-54
Identity = 129/204 (63.24%), Postives = 142/204 (69.61%), Query Frame = 1 

Query: 1   MVKKELGKD-HHQPTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAAR 60
           MVKKELG D +H  +   SK KYKGVRMRSWGSWVSEIR PNQK RIWLGSY TAEAAAR
Sbjct: 1   MVKKELGNDDNHSTSVPTSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAAR 60

Query: 61  AYNAALLCLKDSAATL---------------------MSPKSIKRVAAEAAANAASFDGY 120
           AY+AALLCLK S+A L                     MSPKSI+R AAEAAAN A FDG 
Sbjct: 61  AYDAALLCLKGSSANLNFPISSSSFAHFHNFLDDNNVMSPKSIQRFAAEAAANTAFFDGI 120

Query: 121 VE-NKVGSIDVP-----LSPRSSSSSSVPSTSNNDSIMTMEPLWFNFDDIVTPKYIEHMM 174
           VE N  GS DVP     LS  SSSSSS  STSN+DS    +P WFNFDDI++PKY+  MM
Sbjct: 121 VESNMAGSSDVPPLSPLLSSSSSSSSSFSSTSNSDSFTMSDPSWFNFDDILSPKYVGQMM 180

[Close]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match: gi|823136340|ref|XP_012467927.1| (PREDICTED: ethylene-responsive transcription factor ERF014-like [Gossypium raimondii])

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-36
Identity = 100/194 (51.55%), Postives = 122/194 (62.89%), Query Frame = 1 

Query: 13  PTASASKSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKDSA 72
           P++S+ K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK S+
Sbjct: 20  PSSSSCKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSS 79

Query: 73  ATL--------------MSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSSSS 132
           A+L              MSPKSI+RVAA AAAN+   +G       S   P+SP  SS  
Sbjct: 80  ASLNFPNTSLDYIPDAIMSPKSIQRVAAAAAANSFPDNGISS----STTAPVSPTPSSLV 139

Query: 133 SVPSTSNN--------------DSIMTMEPLWFNFDDIVTPKYIEHMMDGTLFDPPIV-- 174
           S PS +++              +SI  MEP + +FDD+ +PKYI+ M +   FDPP V  
Sbjct: 140 SSPSMASSPSDQVDDVSLIQSLESISMMEPWYTSFDDLQSPKYIDQMFNLVPFDPPTVMD 199

[Close]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match: gi|590598837|ref|XP_007019013.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-36
Identity = 103/201 (51.24%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 13  PTASAS--KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 72
           PT+S+S  K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK 
Sbjct: 22  PTSSSSCKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKG 81

Query: 73  SAA--------------TLMSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSS 132
           S+A              T+MSPKSI+RVAA AA      + +V+N       P  P  SS
Sbjct: 82  SSANLNFPITSSHYIPDTVMSPKSIQRVAAAAA------NSFVDNATTPPISPPPPSISS 141

Query: 133 SSSVPSTS---------------------NNDSIMTMEPLWFNFDDIVTPKYIEHMMDGT 174
           SSSV S S                     N++ I  MEP W++FD + +PKYI+ M +  
Sbjct: 142 SSSVSSPSMSSSPSDQVDDDVSLMQSLVANDEPISMMEP-WYSFDSLHSPKYIDQMFNLA 201

[Close]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match: gi|566156958|ref|XP_006386376.1| (AP2 domain-containing transcription factor family protein [Populus trichocarpa])

HSP 1 Score: 159.1 bits (401), Expect = 7.1e-36
Identity = 103/198 (52.02%), Postives = 124/198 (62.63%), Query Frame = 1 

Query: 13  PTASAS--KSKYKGVRMRSWGSWVSEIRPPNQKARIWLGSYPTAEAAARAYNAALLCLKD 72
           PT+S++  K KYKGVRMRSWGSWVSEIR PNQK RIWLGSY T EAAARAY+AALLCLK 
Sbjct: 17  PTSSSACKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKG 76

Query: 73  SAATL--------------MSPKSIKRVAAEAAANAASFDGYVENKVGSIDVPLSPRSSS 132
           S+A L              MSPKSI+RVAA AAAN +S D     +V S+ +P S  SSS
Sbjct: 77  SSANLNFPITSSHYIPDAVMSPKSIQRVAA-AAAN-SSEDNPTTPQVSSLPLPSSSSSSS 136

Query: 133 S-------SSVPSTSNNDSIMTMEPL------------WFNFDDIVTPKYIEHMMDGTLF 174
           S        S PS   +D +  ME              W+NFD + +PKYI+ M +G  F
Sbjct: 137 SILSSPSMVSSPSDQPDDYMSLMESFETDNEPIPMLDSWYNFDGLQSPKYIDQMFNGVSF 196

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g04690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF13_ARATH1.3e-2144.89Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF14_ARATH2.2e-2140.53Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF12_ARATH3.6e-1939.34Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF18_ARATH8.2e-1639.49Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF01... [more]
ERF42_ARATH8.2e-1637.36Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04... [more]
BLAST of Cp4.1LG13g04690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC86_CUCSA8.1e-5564.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040610 PE=4 SV=1[more]
A0A0D2QGY0_GOSRA1.3e-3651.55Uncharacterized protein OS=Gossypium raimondii GN=B456_002G220900 PE=4 SV=1[more]
A0A061FH68_THECC2.9e-3651.24Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T... [more]
A9PLA6_POPTR5.0e-3652.02AP2 domain-containing transcription factor family protein OS=Populus trichocarpa... [more]
M5XFW9_PRUPE1.0e-3349.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010649mg PE=4 SV=1[more]
BLAST of Cp4.1LG13g04690 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77640.17.3e-2344.89 Integrase-type DNA-binding superfamily protein[more]
AT1G44830.11.3e-2240.53 Integrase-type DNA-binding superfamily protein[more]
AT1G21910.12.0e-2039.34 Integrase-type DNA-binding superfamily protein[more]
AT1G74930.14.6e-1739.49 Integrase-type DNA-binding superfamily protein[more]
AT2G25820.14.6e-1737.36 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cp4.1LG13g04690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446436|ref|XP_004140977.1|1.2e-5464.00PREDICTED: ethylene-responsive transcription factor ERF014 [Cucumis sativus][more]
gi|659131246|ref|XP_008465586.1|2.0e-5463.24PREDICTED: ethylene-responsive transcription factor ERF014-like [Cucumis melo][more]
gi|823136340|ref|XP_012467927.1|1.9e-3651.55PREDICTED: ethylene-responsive transcription factor ERF014-like [Gossypium raimo... [more]
gi|590598837|ref|XP_007019013.1|4.2e-3651.24Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao][more]
gi|566156958|ref|XP_006386376.1|7.1e-3652.02AP2 domain-containing transcription factor family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009861 jasmonic acid and ethylene-dependent systemic resistance
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:1900030 regulation of pectin biosynthetic process
biological_process GO:0045088 regulation of innate immune response
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g04690.1Cp4.1LG13g04690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 44..60
score: 6.3E-9coord: 22..33
score: 6.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 21..75
score: 1.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 20..68
score: 1.9
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 21..84
score: 2.5
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 21..78
score: 19
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 20..73
score: 2.81
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 19..174
score: 3.5
NoneNo IPR availablePANTHERPTHR31985:SF37ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014coord: 19..174
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g04690Cucsa.365220Cucumber (Gy14) v1cgycpeB0953
Cp4.1LG13g04690CmaCh09G008010Cucurbita maxima (Rimu)cmacpeB034
Cp4.1LG13g04690CmaCh15G006900Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g04690CmaCh04G023520Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g04690CmoCh09G007950Cucurbita moschata (Rifu)cmocpeB010
Cp4.1LG13g04690CmoCh04G024610Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g04690CmoCh15G007050Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g04690Cla013953Watermelon (97103) v1cpewmB170
Cp4.1LG13g04690Cla023158Watermelon (97103) v1cpewmB193
Cp4.1LG13g04690Csa6G040610Cucumber (Chinese Long) v2cpecuB196
Cp4.1LG13g04690ClCG11G015650Watermelon (Charleston Gray)cpewcgB161
Cp4.1LG13g04690ClCG08G005530Watermelon (Charleston Gray)cpewcgB180
Cp4.1LG13g04690CSPI06G03330Wild cucumber (PI 183967)cpecpiB197
Cp4.1LG13g04690Lsi04G023820Bottle gourd (USVL1VR-Ls)cpelsiB147
Cp4.1LG13g04690Lsi08G004170Bottle gourd (USVL1VR-Ls)cpelsiB158
Cp4.1LG13g04690MELO3C010466.2Melon (DHL92) v3.6.1cpemedB213
Cp4.1LG13g04690CsaV3_6G003630Cucumber (Chinese Long) v3cpecucB0236
Cp4.1LG13g04690CsaV3_4G028360Cucumber (Chinese Long) v3cpecucB0206
Cp4.1LG13g04690Bhi09G002233Wax gourdcpewgoB0264
Cp4.1LG13g04690Bhi04G001563Wax gourdcpewgoB0250
Cp4.1LG13g04690CsGy6G003340Cucumber (Gy14) v2cgybcpeB739
Cp4.1LG13g04690CsGy4G017080Cucumber (Gy14) v2cgybcpeB482
Cp4.1LG13g04690Carg01519Silver-seed gourdcarcpeB1157
Cp4.1LG13g04690Carg24450Silver-seed gourdcarcpeB0626
Cp4.1LG13g04690Carg00338Silver-seed gourdcarcpeB0936
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g04690Cp4.1LG01g20460Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG13g04690Cp4.1LG06g06280Cucurbita pepo (Zucchini)cpecpeB229
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g04690Wax gourdcpewgoB0252
Cp4.1LG13g04690Cucurbita pepo (Zucchini)cpecpeB215
Cp4.1LG13g04690Cucurbita maxima (Rimu)cmacpeB468
Cp4.1LG13g04690Cucurbita moschata (Rifu)cmocpeB427
Cp4.1LG13g04690Wild cucumber (PI 183967)cpecpiB174
Cp4.1LG13g04690Cucumber (Chinese Long) v2cpecuB173
Cp4.1LG13g04690Melon (DHL92) v3.5.1cpemeB178