CsaV3_4G027460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G027460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	PR domain zinc finger protein 8, putative isoform 1
Location	chr4 : 16607248 .. 16610370 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTGAAAACACTCCAAAATTTAGAAAACAATGAAACTAAATTGTTGCCAAATTTGTTTTTAGAAACCTTTTTAACCTAAAAAAACAATAAAAGGAGAAAAGAAAAGAAAAGAAAAATCTGATTGAAGCGTTTTGGAATTTGCAAATTGAGAAGAAGAAGTAGAAGAAGTAGAAGAAGTAGAAGAAGTAGAAGAAGTAGATGAAGTAGAAGAAGAAGGTTAAAAATGACCGTTCGATGAGCTCTGATCTACAGTTTCACTCACAAAAACTCCATTTTTGATCTCACTTCCAATCTCCATCTCTCTCTCCACTGATTTTATTCTTGATTTTCGAGCCTTATTCTCTTAACTTAAGTTTTTCTCTTCCCCTTTCCGTCGCCATCTTCCTCTTCAATCTCCGTTCAATCCCATTACTCAGCCGCCAGGTAACTTTCTCCCTCTTCTCTTCACTTTCCAAATGCTTTTTTGCTCTCTTTTCCCCTTCCCTGCATCTGGGTTTCTGTTGTTTTTCCCCTTGATATTGTTACGACGCGAAATCTTCAGTTACCCATATGTTTGTTTTCCCTTTCATTGTGTACTTTGATCAGATTCCTCGTTCCCCCCCTCCCGTTAGGGTTTTGTGGTTTTTGATATGATTTCTTCGTCATTCAGGGTTTTGGTTTGCGCCCATTTGAGTTAACGAAGATGGATTTTGCTCGATGTACTGATGAATCTAAAGAATCAGAAAATTCGTCTACTAAATGTTGTAGTAAAGTGGAAACTCAGGTGGAGATTGTTGAACTAAGAGTTCCTATTGAGCCTTCAACGCCTGATGCTGATAGAGAAAGTGGTGATTTTCCTTCTGATTCTAAATCCCCAATCACTCAGGTTGTGACTAGCAAACCTCTTTTATTAACTTGTTTAGATTCTTTAGGTGAAAGAACTGAAGCCCCTTTAGAGAGTTCTGACTCTTTTGATCCTTTGTGTAGCCCTCGTACTCCTAAGGATGGTGTTTTTGATCCCTTTTCCCCTGCCCCTGCTCATTTGGCTTTAGCTCCTATCTCTAGAAAATATTTTAGTGGCTCTGTGGGCTTTGTTCCTCGCCGTCTTCAATTTGGTTCTTCTTCTTCTTCATTGCAATTAGTGGAAGCTGAAGAAGAACAATCCATTTCTGATAGTGAGCTGTTGGAGGCAGTTTATGAGAATCTCTTGGAAGTTATTGTTTCCCATCAAGCTGAATCTTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGATTCTCCTGATTGTAATACACCTCCTACGTCTTTTATGAGTGGGGTTGCTCAAACTTGTCCTGCTGCGCCCGTTAAGCCCTCAAGAAAGTTGCGCAATCTCGACATGGGTTTGTGTAGAAAGCTTGAGTTCTGAATGTTGGTGCATTTCTAATTAGCTTCAGATCATTGCATAGAAGAATGTAGGTAAAGTTGACTCTGGAGAATGAATTACTTACTTGCTAATTTGAACATCTGACGTTTCTGTACTGATTATATGACTAGCAAAATCTCTGCTGAAGCAGGCTGATTATTGTAAATTTTGGAAGTCTTCTTTTGATGAACAAGCTTGTTGGGTTGGATCAAGGATGTTTGTCTTGTGATCTCATCTCCTCAGTTTGGTTAAGAGTAGGATTGAGATGATATTGACCAATAAACCAATCCTCTTTGTTACTCTGATCAGCAAGTTGTTAATATGATGTCATTTTTATTCATTTAGCTAATATTACTTTATTTCCTAGGCAGAGATCCACCTGTAGAAATGCTGAATGAAGAATTATTTGTTACTGGTATCATTTGCCAAAAGAACTTGTACTCTTACTTTTTTTCTGTCAGGATTGTACCATTTCTAGCTCACCTTCTATTATGAATGTTAAATTCTCATTTCACTAATAACTAATCTTTTTGTATCTTCTGGTGATTTCACAACCAAGGACCTTACAAGTTCCAACGCTCCAGTTTTTCATATTAGTTTGAATCTAGTTAGCTATTTTACGGATTATTTAAGACTGGAATATGCTTATGGCAATCGAACTAACTTTGAACTATTGAAGATACAAGATATATGAAGTGAGTCGGATTACTAATTTGTGATTTTATTCATTAAACTTGTTGGAATGTCTTGAGTATCTTATTTAGTGTTTCGAATGAATAAGCACAAGGTCTTGTTATTTACATTATTTAGAGTGTTATATAAACTCTCAAATTCCATTAATGTCTCTTAATCTACAATTTATTATTTTTTTCTCTAATAATAAATTGCTATTCCTTTGCCCTGACATAACAAACACAATATTAGTGAACCAAGTAAATGTTTTTCCGATTCCTCGTAACAAAGCACATGTTGATTTGAGATGTCTAATTGACCCGGGTTCGAAAATGAGTGATGATGGAACTCCCAGGTGATTGTGGAATAGAATACTAGAATTTAATGTTCATGCAGATCTTTCAGAAAATGGATTGATGTATGGTCGAAACTGATGCTTCCATGAAATGAGAAATGTTAGGTATGTGAAGGCCCATTCCTTATCATTTTCTTACTTATCATTATTAAACCTGATGGTGATAGCTGCCTCTTTTGAACAGCAAAGAAGTAAGACGAAAGAACTAAGAAAGAAGAAATTGGTGGCAGTCAGTTCAGATTCTCTTGGTGGCTTAGGCATGGGTGTTGCTCTTGCTTTCTTCTTTTTGGCAGGCAGAAAGTGGCAATTTTCAACAATGGGTGTAGTACAAGTCTTAAAAGTACATAGACTTTTGAGATTTAGGATTTATTTGATGAAATCCTAACTTACTTTTTATTATGTCCTACTTTTTGATCTAGTTGTTAATTGGATAAGCTCAGTTTCACTTCTAATTTCCATTAAATTAAATACTGACTTCAAATAAACTAATTGAGGTTGCCGTAGTGGTCTTTTAGACCATGTAAAGACGTAAGGTGTGGTGGGAATGAATTTTAATTACAAGTTCTATGATCAAAATGTAATGGATATCATGTGACAGTTACATTGAGTGCTGAAATTGACTTGAACACCTTAAAAGGACCCACAAGAGTAATGTCTGAAAATGTATAGAAGATTTGTTGCCTGATTGTGTGGGACTTTGTGGCTTGACAAG

mRNA sequence

ATGGATTTTGCTCGATGTACTGATGAATCTAAAGAATCAGAAAATTCGTCTACTAAATGTTGTAGTAAAGTGGAAACTCAGGTGGAGATTGTTGAACTAAGAGTTCCTATTGAGCCTTCAACGCCTGATGCTGATAGAGAAAGTGGTGATTTTCCTTCTGATTCTAAATCCCCAATCACTCAGGTTGTGACTAGCAAACCTCTTTTATTAACTTGTTTAGATTCTTTAGGTGAAAGAACTGAAGCCCCTTTAGAGAGTTCTGACTCTTTTGATCCTTTGTGTAGCCCTCGTACTCCTAAGGATGGTGTTTTTGATCCCTTTTCCCCTGCCCCTGCTCATTTGGCTTTAGCTCCTATCTCTAGAAAATATTTTAGTGGCTCTGTGGGCTTTGTTCCTCGCCGTCTTCAATTTGGTTCTTCTTCTTCTTCATTGCAATTAGTGGAAGCTGAAGAAGAACAATCCATTTCTGATAGTGAGCTGTTGGAGGCAGTTTATGAGAATCTCTTGGAAGTTATTGTTTCCCATCAAGCTGAATCTTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGATTCTCCTGATTGTAATACACCTCCTACGTCTTTTATGAGTGGGGTTGCTCAAACTTGTCCTGCTGCGCCCGTTAAGCCCTCAAGAAAGTTGCGCAATCTCGACATGGGTTTGTGTAGAAAGCTTGAGTTCTGA

Coding sequence (CDS)

ATGGATTTTGCTCGATGTACTGATGAATCTAAAGAATCAGAAAATTCGTCTACTAAATGTTGTAGTAAAGTGGAAACTCAGGTGGAGATTGTTGAACTAAGAGTTCCTATTGAGCCTTCAACGCCTGATGCTGATAGAGAAAGTGGTGATTTTCCTTCTGATTCTAAATCCCCAATCACTCAGGTTGTGACTAGCAAACCTCTTTTATTAACTTGTTTAGATTCTTTAGGTGAAAGAACTGAAGCCCCTTTAGAGAGTTCTGACTCTTTTGATCCTTTGTGTAGCCCTCGTACTCCTAAGGATGGTGTTTTTGATCCCTTTTCCCCTGCCCCTGCTCATTTGGCTTTAGCTCCTATCTCTAGAAAATATTTTAGTGGCTCTGTGGGCTTTGTTCCTCGCCGTCTTCAATTTGGTTCTTCTTCTTCTTCATTGCAATTAGTGGAAGCTGAAGAAGAACAATCCATTTCTGATAGTGAGCTGTTGGAGGCAGTTTATGAGAATCTCTTGGAAGTTATTGTTTCCCATCAAGCTGAATCTTCTCTTGCTCAGCTCTCAAGCTCTCAAAGTGATTCTCCTGATTGTAATACACCTCCTACGTCTTTTATGAGTGGGGTTGCTCAAACTTGTCCTGCTGCGCCCGTTAAGCCCTCAAGAAAGTTGCGCAATCTCGACATGGGTTTGTGTAGAAAGCTTGAGTTCTGA

Protein sequence

MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPITQVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPISRKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF

Homology

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BLAST of CsaV3_4G027460 vs. NCBI nr
Match: XP_004142723.1 (PREDICTED: uncharacterized protein LOC101204540 isoform X1 [Cucumis sativus] >KGN54478.1 hypothetical protein Csa_4G337350 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 9.0e-123
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT
Sbjct: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS
Sbjct: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120

Query: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180
           RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS
Sbjct: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180

Query: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF
Sbjct: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 233

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BLAST of CsaV3_4G027460 vs. NCBI nr
Match: XP_008463308.1 (PREDICTED: uncharacterized protein LOC103501496 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 7.1e-120
Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKESEN STKCCSKVETQ+EIVELRVPIEPSTPDADRESGDFPSDSKSPIT
Sbjct: 76  MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 135

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTSKPLLLTCLDSLGER EAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS
Sbjct: 136 QVVTSKPLLLTCLDSLGERIEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 195

Query: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180
           RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS
Sbjct: 196 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 255

Query: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           LAQ SSSQSDSPDCNTPPTSF+SGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF
Sbjct: 256 LAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 308

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BLAST of CsaV3_4G027460 vs. NCBI nr
Match: XP_022156261.1 (uncharacterized protein LOC111023190 [Momordica charantia])

HSP 1 Score: 324.3 bits (830), Expect = 3.3e-85
Identity = 175/243 (72.02%), Postives = 195/243 (80.25%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELR-------VPIEPSTPDADRESGDFPS 60
           MDFARC+DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPS
Sbjct: 1   MDFARCSDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPS 60

Query: 61  DSKSPITQVVTSKPLLLTCLDSLGERTEAPLESS-DSFDPLCSPRTPKDGVFDPFSPAPA 120
           DSKSP TQVV ++ L LTCLDSLGER+EAPLE   +S DPLCSPRTPKDGVFDPFSP PA
Sbjct: 61  DSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDPLCSPRTPKDGVFDPFSPGPA 120

Query: 121 HLALAPISRKYFSGSVGFVPRRLQFGS--SSSSLQLVEAEEEQSISDSELLEAVYENLLE 180
           HLALAP+SRKYFSGSVGFV RRLQFGS                 ISDSELLEAVYENLLE
Sbjct: 121 HLALAPLSRKYFSGSVGFVARRLQFGSXXXXXXXXXXXXXXXXXISDSELLEAVYENLLE 180

Query: 181 VIVSHQAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRK 234
           VIVS+QAE+SLAQLSSSQSDS +C TPP  ++SG+AQTCP AP+KP  K R+ D+GLCRK
Sbjct: 181 VIVSNQAEASLAQLSSSQSDSSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRK 240

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BLAST of CsaV3_4G027460 vs. NCBI nr
Match: XP_022950867.1 (uncharacterized protein LOC111453838 [Cucurbita moschata] >XP_023545042.1 uncharacterized protein LOC111804468 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 168/238 (70.59%), Postives = 187/238 (78.57%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKES++S +KCCSK E Q EIVELR PIEPSTPDADRES DFPSDSKSP+T
Sbjct: 1   MDFARCTDESKESDHSPSKCCSKDEAQPEIVELRAPIEPSTPDADRESSDFPSDSKSPLT 60

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTS+ L+L+  D        PLE      PLCSPRTPKDGVFDPFSP PAHLALAP+ 
Sbjct: 61  QVVTSRALVLSSSD--------PLE-----PPLCSPRTPKDGVFDPFSPGPAHLALAPVC 120

Query: 121 RKYFSGSVGFVPRRLQFGS-----SSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSH 180
           RK FSGSVGFV RRLQF S                  Q+I+DSELLEAVYENLLE+I+SH
Sbjct: 121 RKCFSGSVGFVARRLQFDSXXXXXXXXXXXXXXXXXXQTITDSELLEAVYENLLELIISH 180

Query: 181 QAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           QAESSLA ++SS +DS DCNTPP SF++G+AQTCPAAPVKPSRK RNLD+GLCRKLEF
Sbjct: 181 QAESSLAMITSSHTDSLDCNTPPASFITGIAQTCPAAPVKPSRKSRNLDLGLCRKLEF 225

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BLAST of CsaV3_4G027460 vs. NCBI nr
Match: XP_022978277.1 (uncharacterized protein LOC111478311 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 3.2e-80
Identity = 168/238 (70.59%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKES+ S +KCCSK E Q EIVELR PIEPSTPDADRES DFPSDSKSP+T
Sbjct: 1   MDFARCTDESKESDQSPSKCCSKDEAQPEIVELRAPIEPSTPDADRESSDFPSDSKSPLT 60

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTS+ L+L+  D        PLE      PLCSPRTPKDGVFDPFSP PAHLALAP+ 
Sbjct: 61  QVVTSRALVLSSSD--------PLE-----PPLCSPRTPKDGVFDPFSPGPAHLALAPLC 120

Query: 121 RKYFSGSVGFVPRRLQFGS-----SSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSH 180
           RK FSGSVGFV RRLQF S                  Q+I+DSELLEAVYENLLE+I+SH
Sbjct: 121 RKCFSGSVGFVARRLQFDSXXXXXXXXXXXXXXXXXXQTITDSELLEAVYENLLELIISH 180

Query: 181 QAESSLAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           QAESSLA ++SS +DS DCNTPP SF++G+AQTCPAAPVKPSRK RNLD+GLCRKLEF
Sbjct: 181 QAESSLAMITSSHTDSLDCNTPPASFITGIAQTCPAAPVKPSRKSRNLDLGLCRKLEF 225

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BLAST of CsaV3_4G027460 vs. TAIR10
Match: AT2G28330.1 (unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08
Identity = 52/157 (33.12%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 81  EAPLESSDSFDPLCSPRTPKDGVFD--PFSPAPAHLALAPISRKYFSGSVGFVPRRLQFG 140
           E P E+ ++      P+TP   V D  P   + + L+   I  +   G V   P   Q  
Sbjct: 4   EEPCEAKETASSSIEPKTPNPNVPDSIPAIDSDSSLSEEEIVTEKDRGIVTLSPLCKQRI 63

Query: 141 SSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESSLAQLSSSQSDSPDCNTPP 200
            S+S    V       +SD E++E++Y+NLL VI+S Q   S+A +         C TPP
Sbjct: 64  DSASISDCV------LVSDDEIIESLYQNLLRVILSLQQIQSVAVVPEIWC-FDGCKTPP 123

Query: 201 TSF----MSGVAQTCPAAPVKPSRKLRNLDMGLCRKL 232
            S      + V+ TCP AP+K ++  RN+D GL RKL
Sbjct: 124 PSSRNLDSNMVSDTCPGAPMKLTKISRNIDSGLRRKL 153

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BLAST of CsaV3_4G027460 vs. Swiss-Prot
Match: sp|P85192|UP1_HELAN (Unknown protein 1 OS=Helianthus annuus OX=4232 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 138 GSSSSSLQLV----EAEEEQSISDSELLEAVYENLLEVIVSHQAESSLAQLSSSQSDSPD 197
           G+S++  +LV    E   E    +  L+E VYE++LE I+  QAE  LA++  S S    
Sbjct: 76  GTSAAKKKLVFSSNEYVSENECENGSLMETVYESVLEDIICKQAEDILAEILVSGSSRDV 135

Query: 198 CNTPPTSFMS-GVAQTCPAAPVKPS--RKLRNLDMGLCRKLEF 234
             TPP++  + G+ +TCP AP+K    R  R +DM LCRKL+F
Sbjct: 136 LKTPPSAARADGLVETCPGAPMKRKQVRNKRTVDMNLCRKLDF 178

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BLAST of CsaV3_4G027460 vs. Swiss-Prot
Match: sp|Q9SKN7|SMR11_ARATH (Cyclin-dependent protein kinase inhibitor SMR11 OS=Arabidopsis thaliana OX=3702 GN=SMR11 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.5e-07
Identity = 52/157 (33.12%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 81  EAPLESSDSFDPLCSPRTPKDGVFD--PFSPAPAHLALAPISRKYFSGSVGFVPRRLQFG 140
           E P E+ ++      P+TP   V D  P   + + L+   I  +   G V   P   Q  
Sbjct: 4   EEPCEAKETASSSIEPKTPNPNVPDSIPAIDSDSSLSEEEIVTEKDRGIVTLSPLCKQRI 63

Query: 141 SSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESSLAQLSSSQSDSPDCNTPP 200
            S+S    V       +SD E++E++Y+NLL VI+S Q   S+A +         C TPP
Sbjct: 64  DSASISDCV------LVSDDEIIESLYQNLLRVILSLQQIQSVAVVPEIWC-FDGCKTPP 123

Query: 201 TSF----MSGVAQTCPAAPVKPSRKLRNLDMGLCRKL 232
            S      + V+ TCP AP+K ++  RN+D GL RKL
Sbjct: 124 PSSRNLDSNMVSDTCPGAPMKLTKISRNIDSGLRRKL 153

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BLAST of CsaV3_4G027460 vs. TrEMBL
Match: tr|A0A0A0KYB8|A0A0A0KYB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337350 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 6.0e-123
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT
Sbjct: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS
Sbjct: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120

Query: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180
           RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS
Sbjct: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180

Query: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF
Sbjct: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 233

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BLAST of CsaV3_4G027460 vs. TrEMBL
Match: tr|A0A1S3CIW8|A0A1S3CIW8_CUCME (uncharacterized protein LOC103501496 OS=Cucumis melo OX=3656 GN=LOC103501496 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.7e-120
Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKVETQVEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 60
           MDFARCTDESKESEN STKCCSKVETQ+EIVELRVPIEPSTPDADRESGDFPSDSKSPIT
Sbjct: 76  MDFARCTDESKESENLSTKCCSKVETQLEIVELRVPIEPSTPDADRESGDFPSDSKSPIT 135

Query: 61  QVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 120
           QVVTSKPLLLTCLDSLGER EAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS
Sbjct: 136 QVVTSKPLLLTCLDSLGERIEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPIS 195

Query: 121 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 180
           RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS
Sbjct: 196 RKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQSISDSELLEAVYENLLEVIVSHQAESS 255

Query: 181 LAQLSSSQSDSPDCNTPPTSFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           LAQ SSSQSDSPDCNTPPTSF+SGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF
Sbjct: 256 LAQPSSSQSDSPDCNTPPTSFLSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 308

[Close]

BLAST of CsaV3_4G027460 vs. TrEMBL
Match: tr|A0A2C9VIZ0|A0A2C9VIZ0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G167300 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.7e-41
Identity = 110/234 (47.01%), Postives = 148/234 (63.25%), Query Frame = 0


Query: 6   CTDESKESENSSTKCCSKVETQVEIVELRVPIEPS----TPDADRESGDFPSDSKSPITQ 65
           CTD+  +S++ S K    ++        +  +EPS    TPDA++E+GDF  +  SP+T 
Sbjct: 6   CTDKMGKSQDLSQKFTESLDETCSEEANKAKVEPSLGPITPDANKENGDFALEPSSPLT- 65

Query: 66  VVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLALAPISR 125
           VVT  P L T  DS   R +     +D+F    SP+TPKDGVFDPF+P P    LAP S+
Sbjct: 66  VVTKLPTLFT-FDSKTNRNQDQFPYNDNFS---SPKTPKDGVFDPFAPGPDDKVLAPQSK 125

Query: 126 KYFSGSVGFVPRRLQFGSSSSSLQLVE-AEEEQSISDSELLEAVYENLLEVIVSHQAESS 185
           KYF  +   V RRL FGSS   L      +  +SISD E+ ++VYENLLE IVS Q ES+
Sbjct: 126 KYFDEAGISVARRLHFGSSLKGLDHESPGDGMESISDEEIFKSVYENLLEAIVSKQTESA 185

Query: 186 LAQLSSSQSDSPDCNTPPT-SFMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           LA+LS+ + DS  C TPP+ S ++G+A+TCP AP+KP+ K R +D+GLCRKLEF
Sbjct: 186 LAELSNMEWDSDSCRTPPSASQLNGIAETCPGAPLKPTGKSRIIDLGLCRKLEF 234

[Close]

BLAST of CsaV3_4G027460 vs. TrEMBL
Match: tr|W9SCL9|W9SCL9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022770 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.5e-38
Identity = 109/241 (45.23%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 6   CTDESKESENSSTKCCSK------VETQVEIVELRV-----PIEPSTPDADRESGDFPSD 65
           CT++    E+  T    K      VET  E+ E+        + P TPD+DRE+GDFP  
Sbjct: 6   CTNQVNNFEDLGTNSFKKLDSISVVETHKEVAEISEAHKTDSLGPITPDSDRENGDFPIT 65

Query: 66  SKSPITQVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHL 125
            KSP + V   K     C DS    TE  +E+   FD   SPRTPKDG+FDPF+P P  L
Sbjct: 66  LKSPPSSV--KKRESGVCFDS---ETEQMVENPSCFDDHASPRTPKDGIFDPFAPGPDDL 125

Query: 126 ALAPISRKYFSGSVGFVPRRLQFGSSSSSLQLVEAEEEQ-SISDSELLEAVYENLLEVIV 185
           ALAP  RKY S S   V RRL F  S   L   +   +  SISD E++EA+YE+LL+ IV
Sbjct: 126 ALAPQCRKYVSKSRSVVARRLSFDFSVKVLDDKDCRNDALSISDEEIVEAMYESLLDTIV 185

Query: 186 SHQAESSLAQLSSSQSDSPDCNTPPTS-FMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLE 234
           S Q E  LA++SS + DS +C TPP++  +SGVA+TCP AP++P+ K R +D+ LCR+L+
Sbjct: 186 SCQTEVVLAEISSLEWDSNNCRTPPSAPHLSGVAETCPGAPLRPAGKSRKIDLALCRRLQ 241

[Close]

BLAST of CsaV3_4G027460 vs. TrEMBL
Match: tr|A0A2C9VA43|A0A2C9VA43_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G120600 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.9e-38
Identity = 105/239 (43.93%), Postives = 146/239 (61.09%), Query Frame = 0


Query: 1   MDFARCTDESKESENSSTKCCSKV----ETQVEIVELRVPIEPSTPDADRESGDFPSDSK 60
           MD   CTDE  +S++ S K    +    + + +  ++   + P TPDA++E+GDF  D  
Sbjct: 15  MDSDTCTDEMGKSQDLSLKSTKGLDEARDEEAKKAKVETSLGPITPDANKENGDFFLDLC 74

Query: 61  SPITQVVTSKPLLLTCLDSLGERTEAPLESSDSFDPLCSPRTPKDGVFDPFSPAPAHLAL 120
           SP+T V     +L+    + G + + P   S S     SP+TPKD VFDPF+P P    L
Sbjct: 75  SPLTTVTKMPKVLIFDSKTNGNQDQLPYIDSSS-----SPKTPKDVVFDPFAPGPDDKVL 134

Query: 121 APISRKYFSGSVGFVPRRLQFGSSSSSLQLVE-AEEEQSISDSELLEAVYENLLEVIVSH 180
           AP+S+KY   +   V RRL FGSS   L      +  +SISD E+ ++VYENLLEVIVS 
Sbjct: 135 APLSKKYSDEARISVARRLNFGSSPKGLDHTSPGDGVESISDEEMFKSVYENLLEVIVSE 194

Query: 181 QAESSLAQLSSSQSDSPDCNTPPTS-FMSGVAQTCPAAPVKPSRKLRNLDMGLCRKLEF 234
           Q ES+LA+LS+ + D   C TPP++  ++GVA+TCP AP+KP+ K R  D+GLCRKLEF
Sbjct: 195 QTESALAELSNMEWDYDACRTPPSARRLNGVAETCPGAPLKPTAKPRLTDLGLCRKLEF 248

The following BLAST results are available for this feature:

BLAST of CsaV3_4G027460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142723.1	9.0e-123	100.00	PREDICTED: uncharacterized protein LOC101204540 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008463308.1	7.1e-120	97.85	PREDICTED: uncharacterized protein LOC103501496 [Cucumis melo]	[more]
XP_022156261.1	3.3e-85	72.02	uncharacterized protein LOC111023190 [Momordica charantia]	[more]
XP_022950867.1	1.9e-80	70.59	uncharacterized protein LOC111453838 [Cucurbita moschata] >XP_023545042.1 unchar...	[more]
XP_022978277.1	3.2e-80	70.59	uncharacterized protein LOC111478311 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G027460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28330.1	5.3e-08	33.12	unknown protein	[more]

BLAST of CsaV3_4G027460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P85192\|UP1_HELAN	3.0e-08	39.81	Unknown protein 1 OS=Helianthus annuus OX=4232 PE=1 SV=1	[more]
sp\|Q9SKN7\|SMR11_ARATH	9.5e-07	33.12	Cyclin-dependent protein kinase inhibitor SMR11 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_4G027460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYB8\|A0A0A0KYB8_CUCSA	6.0e-123	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337350 PE=4 SV=1	[more]
tr\|A0A1S3CIW8\|A0A1S3CIW8_CUCME	4.7e-120	97.85	uncharacterized protein LOC103501496 OS=Cucumis melo OX=3656 GN=LOC103501496 PE=...	[more]
tr\|A0A2C9VIZ0\|A0A2C9VIZ0_MANES	9.7e-41	47.01	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G167300 PE=4 SV=...	[more]
tr\|W9SCL9\|W9SCL9_9ROSA	3.5e-38	45.23	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022770 PE=4 SV=1	[more]
tr\|A0A2C9VA43\|A0A2C9VA43_MANES	5.9e-38	43.93	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G120600 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038971	SMR11/SMR16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G027460.1	CsaV3_4G027460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..59
IPR038971	Cyclin-dependent protein kinase inhibitor SMR11/SMR16	PANTHER	PTHR36310	FAMILY NOT NAMED	coord: 10..233

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G027460	CSPI04G16870	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G027460	Cucsa.130820	Cucumber (Gy14) v1	cgycucB185
CsaV3_4G027460	CmaCh03G002680	Cucurbita maxima (Rimu)	cmacucB0797
CsaV3_4G027460	CmoCh03G002810	Cucurbita moschata (Rifu)	cmocucB0781
CsaV3_4G027460	Carg19542	Silver-seed gourd	carcucB0661
CsaV3_4G027460	Cla012058	Watermelon (97103) v1	cucwmB355
CsaV3_4G027460	MELO3C025269	Melon (DHL92) v3.5.1	cucmeB335
CsaV3_4G027460	ClCG04G006100	Watermelon (Charleston Gray)	cucwcgB318
CsaV3_4G027460	Lsi01G016420	Bottle gourd (USVL1VR-Ls)	cuclsiB272
CsaV3_4G027460	MELO3C025269.2	Melon (DHL92) v3.6.1	cucmedB331
CsaV3_4G027460	Cla97C04G072660	Watermelon (97103) v2	cucwmbB307
CsaV3_4G027460	Bhi03G001798	Wax gourd	cucwgoB397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G027460	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G027460	Cucurbita maxima (Rimu)	cmacucB1020
CsaV3_4G027460	Cucurbita moschata (Rifu)	cmocucB1004
CsaV3_4G027460	Cucurbita pepo (Zucchini)	cpecucB0075
CsaV3_4G027460	Cucurbita pepo (Zucchini)	cpecucB0598
CsaV3_4G027460	Silver-seed gourd	carcucB0316