CsaV3_4G026490 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCGAATGCTGATTCGTCTAGTAAATCCCCGATCCGACAACATTTAAAAAAATACGTGTAACCTGAAAAGAGCTTCCTTTTTTCTAATCGTCACTAGGAATCAGACGCTCGTCCATTCCTCTGCTTATACATACAGCACAAGAAACTCCTATTAATTCCAATTCCAATTCCAAACCCTAAATTGAAAGACTAGATCTCACAACAATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGGCAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGAGTATTATCATAAAACAAGAAAATTTTGAATTAATTTAATTTGAGAGATAAAACAGGGTAATGAGATTGAAATTGTTGAAACAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGAAAGTTTCTTGGGTTTTGATTTTGTTTTGTGTTCATAGGTTTTGTTTTGTTTTTTTTTCTATGTAAATTTAAGTTTGATGTGTTTTTGATTGATTGGGACGTGTACTCTTTATTTTTTGTAAAACAGAGTACATAAGAAACAATGGGTTGTAGGGGTAAGAGAAAGAAGATGCAGAAAATCAGGAAATTTGACTATGAAAATGTAGTTTAATCTTTATTTATTAACAATGGATTTGGTGTTTTGTTGGATGGAACGCTTCTATAGAAAGAAAGGGATTTAAAATATCAGTTGAAAGTTCTATTAGTTATGTAAACTAAATTTTAGAGAATAAATTCCAACTTTCTAATGAATAAGACTAAAGTTGTAGAATTTATGGTGCGAGTGGAAGCATTCTTGACGACTTGATAGTCTATAAAACAAATCAAGTTATTAAATACATAAGGTC ATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGGCAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGA ATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGGCAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGA MEEDGVADEHSHNFIQQRGQEQEHQKSSGFLKNFISNMASSEGTDEKKTDHEYQENGEKSSGFLKNFMSNMVSAEENEGKTDQEKEEEEEGKTNGFLKNFISNIVSGEETEEKAEEEEEEGKENGFLKTFMSNKVNEGEREEKTEVEEEKGGGFLRNFISNMVSSEGNEDDDGKMASNDMVSQKTGEEERDKSSGYKSVEEKGGDNGSGGGGGGGGIIDNIVSHLPASLQGDAVTTSDEAAILIHSIIHE
BLAST of CsaV3_4G026490 vs. NCBI nr
Match: XP_004148627.1 (PREDICTED: major centromere autoantigen B [Cucumis sativus] >KGN54402.1 hypothetical protein Csa_4G312840 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. NCBI nr
Match: XP_008464224.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo]) HSP 1 Score: 87.8 bits (216), Expect = 5.7e-14 Identity = 178/248 (71.77%), Postives = 184/248 (74.19%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. NCBI nr
Match: XP_022978294.1 (cilia- and flagella-associated protein 251 isoform X1 [Cucurbita maxima]) HSP 1 Score: 64.3 bits (155), Expect = 6.7e-07 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. NCBI nr
Match: XP_022978295.1 (cyclin-dependent kinase 11A isoform X2 [Cucurbita maxima]) HSP 1 Score: 64.3 bits (155), Expect = 6.7e-07 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. NCBI nr
Match: XP_022966565.1 (VID27-like protein [Cucurbita maxima]) HSP 1 Score: 64.3 bits (155), Expect = 6.7e-07 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. TrEMBL
Match: tr|A0A0A0L1D7|A0A0A0L1D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 4.0e-32 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026490 vs. TrEMBL
Match: tr|A0A1S3CMH8|A0A1S3CMH8_CUCME (cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.7e-14 Identity = 178/248 (71.77%), Postives = 184/248 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |