Bhi03G001715 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001715
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	cyclin-dependent kinase 11B-like
Location	chr3 : 47298564 .. 47299001 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGGAGAGTGAAGAAGAAACAGAGGACAAACAAGAAGAAGAAGAAGAGAAGGGAGGTGGGTTACTGAGGAATTTCATTTCAAACATGGTATCTGCAGAGGGAAATGAAGATGAAGAAAAAGAGGAGGAAGATGTTATGATTTCTGAGAAAACAGGGGAAGGGGAAAGAGATAAAAGCGGCGGCTCTGAGTTAGTTGAAGAAAAGGGCGGCGGCGGAGGAGGCATTATATACAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTTGGTATTTCGTATAAAGTAGACAATTTGAATTAATTGAATTTGAGAGATGAACAGAGTGATGAGAAATTTGAAATTTTTGTGTGTTTTGTGATGAATGAAACAGGTGATGCAGTGACCACAACAGATGAAGCTGCGATTCTGATTCACTCTATTATCCATGAATGA

mRNA sequence

ATGCAGAGGAGAGTGAAGAAGAAACAGAGGACAAACAAGAAGAAGAAGAAGAGAAGGGAGGTGGAGGGAAATGAAGATGAAGAAAAAGAGGAGGAAGATGTTATGATTTCTGAGAAAACAGGGGAAGGGGAAAGAGATAAAAGCGGCGGCTCTGAGTTAGTTGAAGAAAAGGGCGGCGGCGGAGGAGGCATTATATACAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACCACAACAGATGAAGCTGCGATTCTGATTCACTCTATTATCCATGAATGA

Coding sequence (CDS)

ATGCAGAGGAGAGTGAAGAAGAAACAGAGGACAAACAAGAAGAAGAAGAAGAGAAGGGAGGTGGAGGGAAATGAAGATGAAGAAAAAGAGGAGGAAGATGTTATGATTTCTGAGAAAACAGGGGAAGGGGAAAGAGATAAAAGCGGCGGCTCTGAGTTAGTTGAAGAAAAGGGCGGCGGCGGAGGAGGCATTATATACAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACCACAACAGATGAAGCTGCGATTCTGATTCACTCTATTATCCATGAATGA

Protein sequence

MQRRVKKKQRTNKKKKKRREVEGNEDEEKEEEDVMISEKTGEGERDKSGGSELVEEKGGGGGGIIYNIVSHLPASLQGDAVTTTDEAAILIHSIIHE

Homology

[Close]

BLAST of Bhi03G001715 vs. TrEMBL
Match: tr|A0A1S3CMH8|A0A1S3CMH8_CUCME (cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 184 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 214

[Close]

BLAST of Bhi03G001715 vs. TrEMBL
Match: tr|A0A0A0L1D7|A0A0A0L1D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.5e-07
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTT+DEAAILIHSIIHE
Sbjct: 220 NIVSHLPASLQGDAVTTSDEAAILIHSIIHE 250

[Close]

BLAST of Bhi03G001715 vs. TrEMBL
Match: tr|V4SZR6|V4SZR6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013473mg PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLP SL GD   TTDEA+ILIHSIIH+
Sbjct: 149 NIVSHLPTSLPGDVAPTTDEASILIHSIIHD 179

[Close]

BLAST of Bhi03G001715 vs. TrEMBL
Match: tr|A0A2H5MVR5|A0A2H5MVR5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_000600 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLP SL GD   TTDEA+ILIHSIIH+
Sbjct: 149 NIVSHLPTSLPGDVAPTTDEASILIHSIIHD 179

[Close]

BLAST of Bhi03G001715 vs. TrEMBL
Match: tr|A0A067F7F1|A0A067F7F1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040264mg PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.8e-04
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLP SL GD   TTDEA+ILIHSIIH+
Sbjct: 149 NIVSHLPTSLPGDVAPTTDEASILIHSIIHD 179

[Close]

BLAST of Bhi03G001715 vs. NCBI nr
Match: XP_008464224.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 184 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 214

[Close]

BLAST of Bhi03G001715 vs. NCBI nr
Match: XP_022978294.1 (cilia- and flagella-associated protein 251 isoform X1 [Cucurbita maxima])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 162 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 192

[Close]

BLAST of Bhi03G001715 vs. NCBI nr
Match: XP_022978295.1 (cyclin-dependent kinase 11A isoform X2 [Cucurbita maxima])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 140 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 170

[Close]

BLAST of Bhi03G001715 vs. NCBI nr
Match: XP_022966565.1 (VID27-like protein [Cucurbita maxima])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 142 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 172

[Close]

BLAST of Bhi03G001715 vs. NCBI nr
Match: XP_023518694.1 (cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0


Query: 67  NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 98
           NIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 146 NIVSHLPASLQGDAVTTTDEAAILIHSIIHE 176

The following BLAST results are available for this feature:

BLAST of Bhi03G001715 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G001715 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi03G001715 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CMH8\|A0A1S3CMH8_CUCME	2.9e-07	100.00	cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV...	[more]
tr\|A0A0A0L1D7\|A0A0A0L1D7_CUCSA	8.5e-07	96.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1	[more]
tr\|V4SZR6\|V4SZR6_9ROSI	8.8e-04	77.42	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013473mg PE=4 ...	[more]
tr\|A0A2H5MVR5\|A0A2H5MVR5_CITUN	8.8e-04	77.42	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_000600 PE=4 SV=1	[more]
tr\|A0A067F7F1\|A0A067F7F1_CITSI	8.8e-04	77.42	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040264mg PE=4 SV=1	[more]

BLAST of Bhi03G001715 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464224.1	4.4e-07	100.00	PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo]	[more]
XP_022978294.1	4.4e-07	100.00	cilia- and flagella-associated protein 251 isoform X1 [Cucurbita maxima]	[more]
XP_022978295.1	4.4e-07	100.00	cyclin-dependent kinase 11A isoform X2 [Cucurbita maxima]	[more]
XP_022966565.1	4.4e-07	100.00	VID27-like protein [Cucurbita maxima]	[more]
XP_023518694.1	4.4e-07	100.00	cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001715	Bhi03M001715	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi03G001715	Csa4G312840	Cucumber (Chinese Long) v2	cuwgoB391
Bhi03G001715	MELO3C026015	Melon (DHL92) v3.5.1	mewgoB652
Bhi03G001715	ClCG04G006770	Watermelon (Charleston Gray)	wcgwgoB390
Bhi03G001715	CSPI04G16120	Wild cucumber (PI 183967)	cpiwgoB395
Bhi03G001715	Cucsa.130090	Cucumber (Gy14) v1	cgywgoB248
Bhi03G001715	CmaCh03G003320	Cucurbita maxima (Rimu)	cmawgoB0799
Bhi03G001715	CmaCh07G010770	Cucurbita maxima (Rimu)	cmawgoB1077
Bhi03G001715	CmoCh07G011260	Cucurbita moschata (Rifu)	cmowgoB1070
Bhi03G001715	Lsi01G015720	Bottle gourd (USVL1VR-Ls)	lsiwgoB169
Bhi03G001715	Cp4.1LG10g07820	Cucurbita pepo (Zucchini)	cpewgoB0085
Bhi03G001715	Cp4.1LG19g02550	Cucurbita pepo (Zucchini)	cpewgoB0604
Bhi03G001715	CsGy4G015430	Cucumber (Gy14) v2	cgybwgoB374
Bhi03G001715	MELO3C026015.2	Melon (DHL92) v3.6.1	medwgoB659
Bhi03G001715	Carg20012	Silver-seed gourd	carwgoB0666
Bhi03G001715	Carg13299	Silver-seed gourd	carwgoB0696
Bhi03G001715	CsaV3_4G026490	Cucumber (Chinese Long) v3	cucwgoB397
Bhi03G001715	Cla018079	Watermelon (97103) v1	wgowmB449
Bhi03G001715	Cla97C04G073390	Watermelon (97103) v2	wgowmbB431

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G001715	Wax gourd	wgowgoB015
Bhi03G001715	Cucumber (Gy14) v1	cgywgoB363
Bhi03G001715	Cucumber (Gy14) v2	cgybwgoB319
Bhi03G001715	Cucurbita maxima (Rimu)	cmawgoB0354
Bhi03G001715	Cucurbita maxima (Rimu)	cmawgoB0583
Bhi03G001715	Cucurbita maxima (Rimu)	cmawgoB1036
Bhi03G001715	Cucurbita moschata (Rifu)	cmowgoB0344
Bhi03G001715	Cucurbita moschata (Rifu)	cmowgoB0579
Bhi03G001715	Cucurbita moschata (Rifu)	cmowgoB0791
Bhi03G001715	Cucurbita moschata (Rifu)	cmowgoB1030
Bhi03G001715	Cucurbita pepo (Zucchini)	cpewgoB0812
Bhi03G001715	Cucurbita pepo (Zucchini)	cpewgoB1130
Bhi03G001715	Wild cucumber (PI 183967)	cpiwgoB331
Bhi03G001715	Cucumber (Chinese Long) v3	cucwgoB335
Bhi03G001715	Cucumber (Chinese Long) v2	cuwgoB328
Bhi03G001715	Bottle gourd (USVL1VR-Ls)	lsiwgoB331
Bhi03G001715	Melon (DHL92) v3.6.1	medwgoB422
Bhi03G001715	Melon (DHL92) v3.5.1	mewgoB420
Bhi03G001715	Watermelon (Charleston Gray)	wcgwgoB121
Bhi03G001715	Watermelon (Charleston Gray)	wcgwgoB337
Bhi03G001715	Watermelon (97103) v2	wgowmbB407
Bhi03G001715	Watermelon (97103) v1	wgowmB408
Bhi03G001715	Silver-seed gourd	carwgoB0208
Bhi03G001715	Silver-seed gourd	carwgoB1171