CsaV3_4G024100 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G024100
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	pre-mRNA-splicing factor CWC22 homolog
Location	chr4 : 14047292 .. 14054152 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGAAGAGGAATATTTGGGTTGGTCTGAAAATTGAGTTAACCGAGCCCACGAGGCTGAATTTGAGTTTCGAAAAGCCCATTTGTTGGTGTTGGGCTTGAAGAACTCTGAAGACCCGAGGGGTATTTTTCTCTTGAAAGTGCACAAGATCTGCTGACCCTTATTCCCTCCCTTTCTTCCTTTTTATCTCGTTCCTCTCTCCTGCTTCTCGCATTTCTCTTCCGGCCACCGCACGCTGCCCCTCCGATCCACCTTCCTTCGACGCCGCCCTCCTCAATATCACTTCACTGGAGAAGTCTCGCGGTGATTTTGCGCGGTCTGCTACCTCAACGCCGCGTTAAAACCACCGTTTCGACGCTGCTAATTTAAGCGAGTTTTTGGGGCGATCTTGTTCAGGTAACTCTGTTAGTTCATTGTTACAATTGCTTTTCAAGTAAGTGGCATTACTTATCGAAAGCCTTTGGCTTGGTTGGACACTTTTTTTTCTTCTTTTGGTATGTGTTCTGTGTTATGTGCCGTGAACATTGAATTTGTTTAATATGTGTATTTTGAATTTTGATTAATGGGGTGGTTGTGTTAATTATTTTACTTGGATGTAAAGAACGAGTGTTCTATGTGCTATGCGTTTTGAATTTGTTGATATGTGATCTGATTATGTGGCGTGGATGTCTGAATTACATTACTTGTTTGTGGTTTGAGCATCTTACGTTACATGCATGTAGATGATACCTTTTTTTTAGTTTTAAGTACATGGAAACCGGCGGCGGCGGCGGCTACTAAAACTTGGCATAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGACTGCATCCAAATCTGATGATATCTACCTTAAGTTACTCGTCCAGCTTTACCGCTTCCTTGTCCGTCAGACTGGAAGCAATTTCGATGCTGTGATTCTCTAGCGCCTGTTATTAAGCAAGGTTAACAAGCCTCCACTTTCGCTCTCTATGCTATCCAGTCCATGGAAGGAAAGGAAAGTAAGGTTTCTATTGTTGGGAAAATTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGCTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGTCATTTGACCAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGTTCCTCTTAGAGGTCCTAAGAACTCCCAAAAGGCATGAAAGCATTTTGGTCCAGCACCTGGTGTGTTACACAGCCATTCCTAGCCATATGTGAGGTTTAAGGGAAGGAATTTTGAGAGGGCTAGAGGAAAGAGAAATAGCAAGGGATATGGAGTTTGATTTGATCTTTTACTTTTCCGAGCCTAATTCAATGCCAGTGTGTTATCTTGAACTTCAATAACCAAAATTTGCTAGATTTTAGTTGCATGCCAGCTGTTCCATCTCTTACGGTTTTGCCATAATATCGTTGATTAAGAATTTGATCGAATGATATTCAGCAGGACTTCATAGAGTTTATTTTGCTTAAAAAAAGTAGATGGAAAATGCCCCGAGTTACGAGAACTCATGTTTAGTTATGGTTAAAGTATGTTTAATAGAAGTGGCAAAATAACCATTTGAGATCACATAAATGTAAGATCGAGTAGGAGAGTGAGCTGGAATTGGCTTCAAAAGAGTTCTACTAGAGTTCACTCATGCACCACCAGAGAGCTAGTAACTAAATGTTTACTGTGACTGAAGTGCCTTTGCTAGAGGGTTGGCTCCCCTTTTGGCTAACCGGGTGCCAACTACCATTAGTTGGAGTAAAGTGTCCTAGAGTTTTTTACCAACAAATTTGCACAGTGCTTCTTAAGATGGTTTAATTGTCCCCTCTGTCTAAATAAATATTTTGACTGAAATGTTTTAGGTCCACATAGTTACGTTGCTAGGTGCATGTTAATTGTTATGCTTGTATGAGCCTTTAGTAGAGTTACTGAGTATTATGAATACACACAACCTTTCCAAACATGTTTGTTTTTAGGTAACGATAGAAACGTAGGAGGCACGTAGCAGGTGGTTGCTACGTGTGCGATGGAGGTTGTCTGCATAGTATTTTGTGCTTTTGATAAAACTTTCTCTATTTTGTTGGTTAGTTTTTTTTTTTTCTTGACATTGCTATGTTTGCAATTTTTTTTAATGAAACAAAACCTAATTGTTACATTTTAATTATTGTTTGCCCTTGGGTTGGGCGGTTGTAATTTAGTATAGTTTATTTTAATGATTTGAGAATTTGTTGAGTTTAGTTTTAATTTGGTAAGATGGTCTTTCATCATACGTTATAATACAAGCTTGTTGTTGATTAGAAGTCTTTATGCAAAGTTTTAGATTGTACTGTTTATCAGGATTTATGATAAGGGTAGTTAGGTAGCAACGTAGTATACTCCATGTTTTTGGATAAATTTGGAGGGCCTTACATATTATCTACTTCTGCTTTGTTGATATGCATCTTCCCTAGAAATCTTACTAAAGACCCCTCCTGCTAATCAGTGCTTTTTTTTTGTCTGATGGATAGATTTTAGGTGGTGGTGAAAAGAAATTTGTGCTTTCAAGCCATTTAGATTTTCCTACAGAGTCGTCAGATGGATAGGAAGTATAGCCGAGAGTCGTCAGATGAGGATGAAGTGAAAGGGAACAGGAGAACAAGCAGAGACAATGACAGGCAAGATAGAGACAAAAGACATCAGGACAAAAATTTGCACAGAGAAGTAGAGAGAGGAGACAAGAAAAAATCGTATGAAAGTTTTGATGAAGGTGAACAGAGAACTGAGAGAAACAAAAGTAGACATGATAGAGACAGAAGACATCATGATGAAAAACGCCATAGTAGAGGACAAGAGAGAGAAAACCGAAAAGAATCATATCAAAGTTCTGATGAAGATGAGAGGAAGAATAGGAGGCATGACCGTAGACAGCGTGAAACTGAGAATGAAAATAAAAATTATGATCGCCGTTTGGATCATGATTCAAAAGATGAGCGTGACAAGGAGTTGCTTAGAAAATCAGATCATCGGAGGAACCGGACTGACAGTGATAGGGAGAGAAGACATTCAAAACATGATTACAAGCATAACAATTTTCAAGATCAACGAGATAAGGAGGCAAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGGGTACAGGGACTATTGACCATCTACAGCCTCATAGACAGGAAAAACAGACTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTACATCCCACCATTTAAGTTGGCTAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGGCTTGTGAACAAGGTGAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGTAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTCAATACTAAGTTTCCAGAAGTGGGTGATCTTCTATTGAGAAGAATTGTTTTGCAGCTGAAAAGAGCATATAAACGGAATGACAAGGTAATATTCACAATGATTGTAATTTTTATAATTTTTTCTATTTAGATGTCAAACCTTCCATGTTAAATTCTTTTGCTGATTCTCATTTATTTTATTTATCTTTGACAGCCTCAACTACTTGCTGCTGTGAAATTTATAGCACATTTGGTTAATCAGCAAGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCTCCTAAGGGGCTTCATGGTGCGTATGGAATTGCCATAAATTGTGCAAATTTATTTATTGTTTCTGCATTTTGCTGTGCTCGATCATTTTAATTCACCATGTTGACTGCTTTTTGTTTGCTTGGATCTGTTCCATGAAATTATAATTGTCTAGTCATGCTCATTCTGTTTGCCTTTCTGGAAAAGCTTCTGCCATCTGCACCATATTTTCATCTTTGAAGTTTCCCATATAGAGAATGAGATCATTGAATATTTTTCTTTTGGTATTTCCTATCATTTGAAAAATAATTTTATTTTAGTCTTTAGAACTCAAGGACATTTTTCACCCTATGGAACAGATTTTGTTCGATCAAGTTTTATTTATTTATTTTAGTTTTGTTGTTTTAAAAGATAAATTTCCTCATGATCCCCACCTATTTAACCTCAAGCTTGTATATTCATGTTTCTGTCATTTCTTGTTCATTGATTGTAGGAATATTTGAGCGTTTTCGTGGAATTCTTCATGAAGGAGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCGATAAGGAAAGCAAAGTTTGAGGTATAGTCTATAATTCTCACAATGGGATGAACCCTTAAATAATTAATCGTTTCAGAAATGAATCATTTGCCTTTTAGTACACAGCAGTTGCCTTTTCAGTTGGTTTCTACATGTATGTTTATAAAATCTACTTCAGTTTTCTAGTTCACCCTTTTCAATGTACCTGAAAATGTTGAGTCTGAAGAATTTCTTATTGTTTGTTTCCAAGCACACATATTTCCTTGCATAGCATTAGCAGCAACAGTGTTGTATTTTTAATTTTTCTCTTTTTCCTTTTGGATTTAATTCAGGGCTATCCAGCTGTTCGTCCAGAACTCGACCTCGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCCTTGCAAGAAGAGATAGATCCCGAGATTACTCTTGGTATTTTTTCCCCCTTAAATAATAAATAAAATAAAAACTTGTGCATGGCTTATTAGTTAATCAGAGTAGGTCTTCTCATGATGTATGCTTTGTTTTAATGTAATTTTTCATTCTTATATTTTTCCTATCTTGCTTCCAGATATCTTCAAGTCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACAGATCTGATGCTGGATCAGATGAATCGGAAGATGAGGACGAAGAAGATGAATCAGAAGAAGAAGATGAAGAGCAGATGCAAATAAATGACGAAACTGAAACCAACCTTGTGAACCTAAGAAGGACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCAGGGCATAAGCTTCTAAAAATTAAACTCGAGCCTGGTCAAGAAGTAAGTTCTTTTAGTTCTTTCTGTTGGTCATAACTTCCTTTTAATTAATTTCATAGGCTGCCTGCACTTTTTCTGAAATCAAAGTTTGTTTCCTGTTTATAATAGTGACCTGTAATATTGATGTTTGTCTTGCATGATTGTCTATTGCAATCGATATATTATACAAGTGGTACACGTGTAAGTGTGTTCATTCGTTTTTGTGGTCTTTGCAGATTGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTATCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAGAATTTTGATAAATGCTTTGTCCAGCAGTATTCGATGATTCATAGGCTTGAAACCAATAAGTTAAGAAACGTGGCCAAATTTTTCGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATCCGCCTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAAATCCTCTTCCAGGTATTTCTCATCTATCCTAATCGTGATCTATATGATTGTTTTCCTTTGCTAATGTTTCTTTAGAGTACTTGTTAATTTTGCTTCTACTTAAGATAGAGTAGTTTGATGTAAAACTTATCGGTCGTCAAATTAACACCGCATTCTACACTTTACCATTGTCACTCGTGCCAGTTATCATCTATTTCTCGTCAATAACTAATCTATTTCTTGTCAATAACTAATCTATTTCTTGTCAATAACTAATGCTGTTTCTTTAAAAGAATGATGGTAGCTGTAAAGTTTGCAATTAGGCATTGAAATTAAGAAAGTTGTGTTTTTCACTATTTTGGTAGATGTTAATTTTTGTATCTTGGTCTTAATTGTGTAGGAATTATCAGAACATTTGGGAATTCGACTGTTAAATGAACGTCTCACCGACCCGACAATGCAAGATTCGTTTGAATCTATATTCCCAAGGGATAACCCGAAGAACACAAGATTTTCCATCAACTTCTTCACCTCTATTGGGCTCGGTGGTCTAACTGAGAATTTGCGAGAATATTTAAAAAATATGCCACGGCTAATCATGCAACAGCAAAAACCGGTATCGGATTCCGATGAGGAATCTCAAAGCTCAGATTCTTCGGATTCAGACTCTAGTTCTTCAGAGTCAAAATCAGATTCAGAAGATAGTGAAATCGAAGATAGAAGACGTGAAAAAAAGAGAAGAAAAACTCGAAGGTGATATCAGTATGTTTGTATATTTTCTCTATTCACTCCAAGATGATTTATCTTCCTGCTTCTCCTAGGCATCGTGTTGTGTTGTGTAATAACTTTGTTTGATTGTTTATATGGAAATTTTGGCCCTTTTCATCCCCTAAAATGATTAGATTAATCTGAAGATGTTTGGATTATTTTTACTTCCCAAATTTGAATACAATCAATGATAAGAAAAGATGAGATTCCCATTGTTTAACTTCAGGCCCAATGGAGAAAATGAATTATAAACTGTGGTTCATCATTATTATTACATAATTTAAT

mRNA sequence

ATGGATAGGAAGTATAGCCGAGAGTCGTCAGATGAGGATGAAGTGAAAGGGAACAGGAGAACAAGCAGAGACAATGACAGGCAAGATAGAGACAAAAGACATCAGGACAAAAATTTGCACAGAGAAGTAGAGAGAGGAGACAAGAAAAAATCGTATGAAAGTTTTGATGAAGGTGAACAGAGAACTGAGAGAAACAAAAGTAGACATGATAGAGACAGAAGACATCATGATGAAAAACGCCATAGTAGAGGACAAGAGAGAGAAAACCGAAAAGAATCATATCAAAGTTCTGATGAAGATGAGAGGAAGAATAGGAGGCATGACCGTAGACAGCGTGAAACTGAGAATGAAAATAAAAATTATGATCGCCGTTTGGATCATGATTCAAAAGATGAGCGTGACAAGGAGTTGCTTAGAAAATCAGATCATCGGAGGAACCGGACTGACAGTGATAGGGAGAGAAGACATTCAAAACATGATTACAAGCATAACAATTTTCAAGATCAACGAGATAAGGAGGCAAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGGGTACAGGGACTATTGACCATCTACAGCCTCATAGACAGGAAAAACAGACTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTACATCCCACCATTTAAGTTGGCTAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGGCTTGTGAACAAGGTGAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGTAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTCAATACTAAGTTTCCAGAAGTGGGTGATCTTCTATTGAGAAGAATTGTTTTGCAGCTGAAAAGAGCATATAAACGGAATGACAAGCCTCAACTACTTGCTGCTGTGAAATTTATAGCACATTTGGTTAATCAGCAAGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCTCCTAAGGGGCTTCATGGAATATTTGAGCGTTTTCGTGGAATTCTTCATGAAGGAGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCGATAAGGAAAGCAAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAACTCGACCTCGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCCTTGCAAGAAGAGATAGATCCCGAGATTACTCTTGATATCTTCAAGTCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACAGATCTGATGCTGGATCAGATGAATCGGAAGATGAGGACGAAGAAGATGAATCAGAAGAAGAAGATGAAGAGCAGATGCAAATAAATGACGAAACTGAAACCAACCTTGTGAACCTAAGAAGGACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCAGGGCATAAGCTTCTAAAAATTAAACTCGAGCCTGGTCAAGAAATTGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTATCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAGAATTTTGATAAATGCTTTGTCCAGCAGTATTCGATGATTCATAGGCTTGAAACCAATAAGTTAAGAAACGTGGCCAAATTTTTCGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATCCGCCTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAAATCCTCTTCCAGGAATTATCAGAACATTTGGGAATTCGACTGTTAAATGAACGTCTCACCGACCCGACAATGCAAGATTCGTTTGAATCTATATTCCCAAGGGATAACCCGAAGAACACAAGATTTTCCATCAACTTCTTCACCTCTATTGGGCTCGGTGGTCTAACTGAGAATTTGCGAGAATATTTAAAAAATATGCCACGGCTAATCATGCAACAGCAAAAACCGGTATCGGATTCCGATGAGGAATCTCAAAGCTCAGATTCTTCGGATTCAGACTCTAGTTCTTCAGAGTCAAAATCAGATTCAGAAGATAGTGAAATCGAAGATAGAAGACGTGAAAAAAAGAGAAGAAAAACTCGAAGGTGA

Coding sequence (CDS)

ATGGATAGGAAGTATAGCCGAGAGTCGTCAGATGAGGATGAAGTGAAAGGGAACAGGAGAACAAGCAGAGACAATGACAGGCAAGATAGAGACAAAAGACATCAGGACAAAAATTTGCACAGAGAAGTAGAGAGAGGAGACAAGAAAAAATCGTATGAAAGTTTTGATGAAGGTGAACAGAGAACTGAGAGAAACAAAAGTAGACATGATAGAGACAGAAGACATCATGATGAAAAACGCCATAGTAGAGGACAAGAGAGAGAAAACCGAAAAGAATCATATCAAAGTTCTGATGAAGATGAGAGGAAGAATAGGAGGCATGACCGTAGACAGCGTGAAACTGAGAATGAAAATAAAAATTATGATCGCCGTTTGGATCATGATTCAAAAGATGAGCGTGACAAGGAGTTGCTTAGAAAATCAGATCATCGGAGGAACCGGACTGACAGTGATAGGGAGAGAAGACATTCAAAACATGATTACAAGCATAACAATTTTCAAGATCAACGAGATAAGGAGGCAAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGGGTACAGGGACTATTGACCATCTACAGCCTCATAGACAGGAAAAACAGACTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTACATCCCACCATTTAAGTTGGCTAGAATGATGAAGGAGGTCCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGGCTTGTGAACAAGGTGAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGTAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTCAATACTAAGTTTCCAGAAGTGGGTGATCTTCTATTGAGAAGAATTGTTTTGCAGCTGAAAAGAGCATATAAACGGAATGACAAGCCTCAACTACTTGCTGCTGTGAAATTTATAGCACATTTGGTTAATCAGCAAGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCTCCTAAGGGGCTTCATGGAATATTTGAGCGTTTTCGTGGAATTCTTCATGAAGGAGAAATAGACAAAAGGGTTCAGTTTCTGATTGAAGGCCTATTTGCGATAAGGAAAGCAAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAACTCGACCTCGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCCTTGCAAGAAGAGATAGATCCCGAGATTACTCTTGATATCTTCAAGTCTGATCCAAATTTCCTCGAAAACGAGAAGCGTTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACAGATCTGATGCTGGATCAGATGAATCGGAAGATGAGGACGAAGAAGATGAATCAGAAGAAGAAGATGAAGAGCAGATGCAAATAAATGACGAAACTGAAACCAACCTTGTGAACCTAAGAAGGACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCAGGGCATAAGCTTCTAAAAATTAAACTCGAGCCTGGTCAAGAAATTGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTATCTTCGATATTATGGTCTGTTGGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAGAATTTTGATAAATGCTTTGTCCAGCAGTATTCGATGATTCATAGGCTTGAAACCAATAAGTTAAGAAACGTGGCCAAATTTTTCGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATCCGCCTGACTGAAGAAGACACCACATCTTCATCAAGGATTTTTATTAAAATCCTCTTCCAGGAATTATCAGAACATTTGGGAATTCGACTGTTAAATGAACGTCTCACCGACCCGACAATGCAAGATTCGTTTGAATCTATATTCCCAAGGGATAACCCGAAGAACACAAGATTTTCCATCAACTTCTTCACCTCTATTGGGCTCGGTGGTCTAACTGAGAATTTGCGAGAATATTTAAAAAATATGCCACGGCTAATCATGCAACAGCAAAAACCGGTATCGGATTCCGATGAGGAATCTCAAAGCTCAGATTCTTCGGATTCAGACTCTAGTTCTTCAGAGTCAAAATCAGATTCAGAAGATAGTGAAATCGAAGATAGAAGACGTGAAAAAAAGAGAAGAAAAACTCGAAGGTGA

Protein sequence

MDRKYSRESSDEDEVKGNRRTSRDNDRQDRDKRHQDKNLHREVERGDKKKSYESFDEGEQRTERNKSRHDRDRRHHDEKRHSRGQERENRKESYQSSDEDERKNRRHDRRQRETENENKNYDRRLDHDSKDERDKELLRKSDHRRNRTDSDRERRHSKHDYKHNNFQDQRDKEASGRREDRRNIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSDSSDSDSSSSESKSDSEDSEIEDRRREKKRRKTRR

Homology

[Close]

BLAST of CsaV3_4G024100 vs. NCBI nr
Match: XP_004142129.1 (PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus] >KGN54161.1 hypothetical protein Csa_4G290770 [Cucumis sativus])

HSP 1 Score: 1043.5 bits (2697), Expect = 3.7e-301
Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX 60
           MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX
Sbjct: 1   MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 240
           XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 181 XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 240

Query: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
Sbjct: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300

Query: 301 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 360
           PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 301 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 360

Query: 361 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 420
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI
Sbjct: 361 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 420

Query: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 480
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD
Sbjct: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 480

Query: 481 PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 600
           XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 541 XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 600

Query: 601 LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 660
           LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 601 LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 660

Query: 661 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 720
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 661 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 720

Query: 721 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD 755
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD
Sbjct: 721 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD 754

[Close]

BLAST of CsaV3_4G024100 vs. NCBI nr
Match: XP_008449735.1 (PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 1021.1 bits (2639), Expect = 2.0e-294
Identity = 562/565 (99.47%), Postives = 563/565 (99.65%), Query Frame = 0


Query: 188 EKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ 247
           EKVGTGTIDH QPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ
Sbjct: 238 EKVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ 297

Query: 248 RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF 307
           RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF
Sbjct: 298 RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF 357

Query: 308 AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL 367
           AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL
Sbjct: 358 AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL 417

Query: 368 ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL 427
           ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL
Sbjct: 418 ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL 477

Query: 428 IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE 487
           IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE
Sbjct: 478 IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE 537

Query: 488 KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLR 547
           KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLVNLR
Sbjct: 538 KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLVNLR 597

Query: 548 RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK 607
           RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK
Sbjct: 598 RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK 657

Query: 608 INKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT 667
           INKVYQENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT
Sbjct: 658 INKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT 717

Query: 668 SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL 727
           SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL
Sbjct: 718 SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL 777

Query: 728 GGLTENLREYLKNMPRLIMQQQKPV 753
           GGLTENLREYLKNMPRLIMQQQKPV
Sbjct: 778 GGLTENLREYLKNMPRLIMQQQKPV 802

[Close]

BLAST of CsaV3_4G024100 vs. NCBI nr
Match: XP_008449736.1 (PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 1019.6 bits (2635), Expect = 5.7e-294
Identity = 561/564 (99.47%), Postives = 562/564 (99.65%), Query Frame = 0


Query: 189 KVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR 248
           KVGTGTIDH QPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR
Sbjct: 189 KVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR 248

Query: 249 LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA 308
           LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA
Sbjct: 249 LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA 308

Query: 309 ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE 368
           ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE
Sbjct: 309 ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE 368

Query: 369 LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI 428
           LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI
Sbjct: 369 LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI 428

Query: 429 EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK 488
           EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK
Sbjct: 429 EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK 488

Query: 489 RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRR 548
           RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLVNLRR
Sbjct: 489 RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLVNLRR 548

Query: 549 TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI 608
           TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI
Sbjct: 549 TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI 608

Query: 609 NKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS 668
           NKVYQENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS
Sbjct: 609 NKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS 668

Query: 669 SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG 728
           SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG
Sbjct: 669 SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG 728

Query: 729 GLTENLREYLKNMPRLIMQQQKPV 753
           GLTENLREYLKNMPRLIMQQQKPV
Sbjct: 729 GLTENLREYLKNMPRLIMQQQKPV 752

[Close]

BLAST of CsaV3_4G024100 vs. NCBI nr
Match: XP_022969283.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969291.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969299.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969308.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969316.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969320.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969324.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima])

HSP 1 Score: 1004.6 bits (2596), Expect = 1.9e-289
Identity = 552/569 (97.01%), Postives = 562/569 (98.77%), Query Frame = 0


Query: 184 IGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSS 243
           IGEKEK GT T+DH QPHRQEKQ+ENNLN D+SNLGKSGGVYIPPFKLARMM+EVQDKSS
Sbjct: 349 IGEKEKAGTRTLDHPQPHRQEKQSENNLNSDASNLGKSGGVYIPPFKLARMMREVQDKSS 408

Query: 244 IEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF 303
           +EYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF
Sbjct: 409 VEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF 468

Query: 304 TDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 363
           TDVFAALV+VVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE
Sbjct: 469 TDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 528

Query: 364 IIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKR 423
           IIALELLTVLLENPTDDSVEVAVGFVTECGSIL+D SPKGLHGIFERFRGILHEGEIDKR
Sbjct: 529 IIALELLTVLLENPTDDSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKR 588

Query: 424 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNF 483
           VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEI LDIFKSDPNF
Sbjct: 589 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEMSLQEEIDPEIALDIFKSDPNF 648

Query: 484 LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL 543
           LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL
Sbjct: 649 LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL 708

Query: 544 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ 603
           VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ
Sbjct: 709 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ 768

Query: 604 RFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE 663
           RFCKINKV+QENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE
Sbjct: 769 RFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE 828

Query: 664 EDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFT 723
           EDTTSSSRIFIKILFQELSEHLGIRLLNERL DPTMQDSFESIFPRDNPKNTRFSINFFT
Sbjct: 829 EDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFT 888

Query: 724 SIGLGGLTENLREYLKNMPRLIMQQQKPV 753
           SIGLGGLTENLREYLKNMPRLIMQQQKPV
Sbjct: 889 SIGLGGLTENLREYLKNMPRLIMQQQKPV 917

[Close]

BLAST of CsaV3_4G024100 vs. NCBI nr
Match: XP_022928022.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928025.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928034.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928043.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928050.1 pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])

HSP 1 Score: 1004.2 bits (2595), Expect = 2.5e-289
Identity = 553/569 (97.19%), Postives = 561/569 (98.59%), Query Frame = 0


Query: 184 IGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSS 243
           IGEKEK GT T+DH QPHRQEKQ ENNLN D+SNLGKSGGVYIPPFKLARMMKEVQDKSS
Sbjct: 346 IGEKEKAGTRTLDHPQPHRQEKQPENNLNSDASNLGKSGGVYIPPFKLARMMKEVQDKSS 405

Query: 244 IEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF 303
           +EYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF
Sbjct: 406 VEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF 465

Query: 304 TDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 363
           TDVFAALV+VVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE
Sbjct: 466 TDVFAALVSVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 525

Query: 364 IIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKR 423
           IIALELLTVLLENPTD+SVEVAVGFVTECGSIL+D SPKGLHGIFERFRGILHEGEIDKR
Sbjct: 526 IIALELLTVLLENPTDNSVEVAVGFVTECGSILQDFSPKGLHGIFERFRGILHEGEIDKR 585

Query: 424 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNF 483
           VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSDPNF
Sbjct: 586 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNF 645

Query: 484 LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL 543
           LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL
Sbjct: 646 LENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL 705

Query: 544 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ 603
           VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ
Sbjct: 706 VNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQ 765

Query: 604 RFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE 663
           RFCKINKV+QENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE
Sbjct: 766 RFCKINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTE 825

Query: 664 EDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFT 723
           EDTTSSSRIFIKILFQELSEHLGIRLLNERL DPTMQDSFESIFPRDNPKNTRFSINFFT
Sbjct: 826 EDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQDSFESIFPRDNPKNTRFSINFFT 885

Query: 724 SIGLGGLTENLREYLKNMPRLIMQQQKPV 753
           SIGLGGLTENLREYLKNMPRLIMQQQKPV
Sbjct: 886 SIGLGGLTENLREYLKNMPRLIMQQQKPV 914

[Close]

BLAST of CsaV3_4G024100 vs. TAIR10
Match: AT1G80930.1 (MIF4G domain-containing protein / MA3 domain-containing protein)

HSP 1 Score: 855.5 bits (2209), Expect = 2.6e-248
Identity = 470/541 (86.88%), Postives = 512/541 (94.64%), Query Frame = 0


Query: 211 LNPDSSN---LGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNA 270
           LNP  +N   LGK+GGVYIPPFKLARMMKEV+DKSS+EYQRLTWDALRKSINGLVNKVNA
Sbjct: 316 LNPSENNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNA 375

Query: 271 TNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLR 330
           +NIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAV+N KFPEV +LLL+
Sbjct: 376 SNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVINAKFPEVAELLLK 435

Query: 331 RIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVG 390
           R+VLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVA EIIALEL+T+LL +PTDDSVEVAVG
Sbjct: 436 RVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELVTILLGDPTDDSVEVAVG 495

Query: 391 FVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRP 450
           FVTECG++L+D+SP+GL+GIFERFRGILHEGEIDKRVQ+LIE LFA RKAKF+G+PAVRP
Sbjct: 496 FVTECGAMLQDVSPRGLNGIFERFRGILHEGEIDKRVQYLIESLFATRKAKFQGHPAVRP 555

Query: 451 ELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESXXXXX 510
           ELDLV  E++ +H++SL  EIDPE  LDIFK DP+F+ENEK+YE LKK +LG+E   XXX
Sbjct: 556 ELDLV--EEKYSHDLSLDHEIDPETALDIFKPDPDFVENEKKYEALKKELLGDEE--XXX 615

Query: 511 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTIMSSVDFEEAGHKL 570
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLVNLRRTIYLTIMSSVDFEEAGHKL
Sbjct: 616 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLVNLRRTIYLTIMSSVDFEEAGHKL 675

Query: 571 LKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMI 630
           LKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INK++QENF+KCFVQQYSMI
Sbjct: 676 LKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMI 735

Query: 631 HRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGI 690
           HRLETNKLRNVAKFFAHLLGTDALPWHVL+YIRLTEEDTTSSSRIFIKILFQELSEHLGI
Sbjct: 736 HRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGI 795

Query: 691 RLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQ 749
           RLLNERL DPTMQ+S ESIFP+DNPKNTRF+INFFTSIGLGG+TENLREYLKNMP LIMQ
Sbjct: 796 RLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQ 852

[Close]

BLAST of CsaV3_4G024100 vs. TAIR10
Match: AT1G52325.1 (Initiation factor eIF-4 gamma, MA3)

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-33
Identity = 81/184 (44.02%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 555 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQE 614
           MSS+DFEEAGHKLLKI+LE GQ +ELCVM+LECC++E+TY  +Y                
Sbjct: 1   MSSLDFEEAGHKLLKIRLEQGQGMELCVMVLECCTEEKTYRSFY---------------- 60

Query: 615 NFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 674
                                                            ED+TSSS IF+
Sbjct: 61  ------------------------------------------------VEDSTSSSLIFL 120

Query: 675 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 734
           K LF +LSE L I+LLNE+L DPTM+++FESIFP+D+ KNT FSI FFT IGLGG+T+ L
Sbjct: 121 KTLFLQLSELLRIKLLNEKLQDPTMEETFESIFPKDHRKNTLFSIIFFTKIGLGGITQTL 120

Query: 735 REYL 739
           R+ +
Sbjct: 181 RQLI 120

[Close]

BLAST of CsaV3_4G024100 vs. TAIR10
Match: AT5G17930.1 (MIF4G domain-containing protein / MA3 domain-containing protein)

HSP 1 Score: 73.6 bits (179), Expect = 6.4e-13
Identity = 40/139 (28.78%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 547 RRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFC 606
           R+ I+  IMSS D+ +A  KLL++ L   Q+ E+  +L+ECC QE+ + ++Y +L  + C
Sbjct: 587 RKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIMRVLVECCLQEKAFNKFYTVLASKLC 646

Query: 607 KINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDT 666
           + +K ++     C    +  +  +   +  ++AKF A ++ T  L   VL  + L     
Sbjct: 647 EHDKNHKFTLQYCIWDHFKELESMSLQRSMHLAKFVAEIIVTFNLSLAVLKSVDLANPVE 706

Query: 667 TSSSRIF-IKILFQELSEH 685
            +  RI   ++LF+ + EH
Sbjct: 707 LTPKRIMHFRMLFEAIFEH 725

[Close]

BLAST of CsaV3_4G024100 vs. Swiss-Prot
Match: sp|Q8C5N3|CWC22_MOUSE (Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 2.7e-170
Identity = 323/547 (59.05%), Postives = 424/547 (77.51%), Query Frame = 0


Query: 205 KQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNK 264
           K+ ++ L+P    L ++GG YIPP KL  M +++ DKSS+ YQR++W+AL+KSINGL+NK
Sbjct: 114 KKKKDELDP---LLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINK 173

Query: 265 VNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDL 324
           VN +NI  II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+KFP++G+L
Sbjct: 174 VNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGEL 233

Query: 325 LLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEV 384
           +L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEV
Sbjct: 234 ILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEV 293

Query: 385 AVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPA 444
           A+GF+ ECG  L  +SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ +P 
Sbjct: 294 AIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPV 353

Query: 445 VRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNIL--GEES 504
           +   LDLVE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL  G+  
Sbjct: 354 ILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDXX 413

Query: 505 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTIMSSVDFEE 564
           XXXXXXXXXXXXXXXXXXXXXXXXXXX            NLV+ RRTIYL I SS+DFEE
Sbjct: 414 XXXXXXXXXXXXXXXXXXXXXXXXXXXGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEE 473

Query: 565 AGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQ 624
             HKLLK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+F+  F +
Sbjct: 474 CAHKLLKMEFAESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKE 533

Query: 625 QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELS 684
           QY  IHRLETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL 
Sbjct: 534 QYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELC 593

Query: 685 EHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMP 744
           E++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P
Sbjct: 594 EYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTP 653

Query: 745 RLIMQQQ 750
           ++I+ Q+
Sbjct: 654 KVIVAQK 657

[Close]

BLAST of CsaV3_4G024100 vs. Swiss-Prot
Match: sp|Q9HCG8|CWC22_HUMAN (Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3)

HSP 1 Score: 599.7 bits (1545), Expect = 4.6e-170
Identity = 323/549 (58.83%), Postives = 426/549 (77.60%), Query Frame = 0


Query: 205 KQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNK 264
           K+ ++ L+P    L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSINGL+NK
Sbjct: 116 KKKKDELDP---LLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINK 175

Query: 265 VNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDL 324
           VN +NI  II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+KFP++G+L
Sbjct: 176 VNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGEL 235

Query: 325 LLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEV 384
           +L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEV
Sbjct: 236 ILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEV 295

Query: 385 AVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPA 444
           A+GF+ ECG  L  +SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ +P 
Sbjct: 296 AIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPI 355

Query: 445 VRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGE-ESX 504
           +   LDLVE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E ++ 
Sbjct: 356 ILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTD 415

Query: 505 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTIMSSVDFEEA 564
            XXXXXXXXXXXXXXXXXXXXXXXXXXX          NLV+ RRTIYL I SS+DFEE 
Sbjct: 416 SXXXXXXXXXXXXXXXXXXXXXXXXXXXKVTIHDKTEINLVSFRRTIYLAIQSSLDFEEC 475

Query: 565 GHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQ 624
            HKLLK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+F+  F +Q
Sbjct: 476 AHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQ 535

Query: 625 YSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSE 684
           Y  IHRLETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL E
Sbjct: 536 YDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCE 595

Query: 685 HLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPR 744
           ++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P+
Sbjct: 596 YMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPK 655

Query: 745 LIMQQQKPV 753
           +I+ Q+  V
Sbjct: 656 VIVAQKPDV 661

[Close]

BLAST of CsaV3_4G024100 vs. Swiss-Prot
Match: sp|Q5RA93|CWC22_PONAB (Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 1.3e-169
Identity = 322/560 (57.50%), Postives = 426/560 (76.07%), Query Frame = 0


Query: 194 TIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDA 253
           ++    P + E  T+   +     L ++GG YIPP KL  M +++ DK+S+ YQR++W+A
Sbjct: 102 SVTQSSPAQDEPATKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEA 161

Query: 254 LRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAV 313
           L+KSINGL+NKVN +NI  II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA+
Sbjct: 162 LKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAI 221

Query: 314 VNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVL 373
           +N+KFP++G+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+L
Sbjct: 222 INSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLL 281

Query: 374 LENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA 433
           LE PTDDSVEVA+GF+ ECG  L  +SP+G++ IF R R ILHE EIDKRVQ++IE +FA
Sbjct: 282 LERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFGRLRNILHESEIDKRVQYMIEVMFA 341

Query: 434 IRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDL 493
           +RK  F+ +P +   LDLVE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +
Sbjct: 342 VRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAI 401

Query: 494 KKNILGE-ESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYL 553
           KK IL E ++  XXXXXXXXXXXXXXXXXXXXXXXXXXX          NLV+ RRTIYL
Sbjct: 402 KKEILDEGDTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXKVTIHDKTEINLVSFRRTIYL 461

Query: 554 TIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVY 613
            I SS+DFEE  HKLLK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y
Sbjct: 462 AIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEY 521

Query: 614 QENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRI 673
            E+F+  F +QY  IHRLETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRI
Sbjct: 522 MESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRI 581

Query: 674 FIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTE 733
           F+KI FQEL E++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+
Sbjct: 582 FVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTD 641

Query: 734 NLREYLKNMPRLIMQQQKPV 753
            LRE+LKN P++I+ Q+  V
Sbjct: 642 ELREHLKNTPKVIVAQKPDV 661

[Close]

BLAST of CsaV3_4G024100 vs. Swiss-Prot
Match: sp|Q08C72|CWC22_DANRE (Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 2.3e-169
Identity = 324/543 (59.67%), Postives = 423/543 (77.90%), Query Frame = 0


Query: 205 KQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNK 264
           K+ +  L+P    L ++GG YIPP KL  M  ++ DKSS+EYQR++W+AL+KSINGL+NK
Sbjct: 210 KKRKETLDP---ILTRTGGAYIPPAKLRMMQAQITDKSSLEYQRMSWEALKKSINGLINK 269

Query: 265 VNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDL 324
           VN +NI NII EL  EN++RGRGL  RS +++Q ASP FT V++A+VA++N+KFP++G+L
Sbjct: 270 VNVSNIANIIQELLQENIVRGRGLLARSILQAQAASPIFTHVYSAVVAIINSKFPQIGEL 329

Query: 325 LLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEV 384
           +L+R++L  ++ Y+RNDK Q L A KF+ HL+NQ VAHE++ LE+LT+LLE PTDDSVEV
Sbjct: 330 ILKRLILNFRKGYRRNDKQQCLTASKFVGHLINQNVAHEVLCLEMLTLLLERPTDDSVEV 389

Query: 385 AVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPA 444
           A+ F+ ECG  L ++SP+G++ IFER R ILHE EIDKRVQ++IE +FAIRK  F+ +P 
Sbjct: 390 AISFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPI 449

Query: 445 VRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGE-ESX 504
           +   LDLVE+EDQ TH + L++E + E  L++FK DPNFLENE++Y+ +K+ IL E   X
Sbjct: 450 IPEGLDLVEEEDQFTHMLPLEDEYNTEDILNVFKLDPNFLENEEKYKTIKREILDEGXXX 509

Query: 505 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTIMSSVDFEEA 564
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         NLV  RRTIYL I SS+DFEE 
Sbjct: 510 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTIFDQTEVNLVAFRRTIYLAIQSSLDFEEC 569

Query: 565 GHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQ 624
            HKL+K+     Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+F+  F +Q
Sbjct: 570 AHKLIKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFQEQ 629

Query: 625 YSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSE 684
           Y  IHRLETNKLRNVA+ FAHLL TD++PW VL  +R++E+ TTSSSRIF+KILFQEL  
Sbjct: 630 YETIHRLETNKLRNVARIFAHLLYTDSVPWSVLECVRMSEDTTTSSSRIFVKILFQELCA 689

Query: 685 HLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPR 744
           ++G+  LNERL D T+Q  FE +FPRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P+
Sbjct: 690 YMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPK 749

Query: 745 LIM 747
           +IM
Sbjct: 750 MIM 749

[Close]

BLAST of CsaV3_4G024100 vs. Swiss-Prot
Match: sp|Q5BGP1|CWC22_EMENI (Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cwc22 PE=3 SV=2)

HSP 1 Score: 588.2 bits (1515), Expect = 1.4e-166
Identity = 313/524 (59.73%), Postives = 404/524 (77.10%), Query Frame = 0


Query: 220 KSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 279
           +SGG YIPP +L  +  ++ DK+S EYQR+ W+AL+KSINGL+NKVN +NIK I+PELF 
Sbjct: 110 RSGGTYIPPARLRALQAQITDKTSKEYQRMAWEALKKSINGLINKVNVSNIKYIVPELFG 169

Query: 280 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKR 339
           ENL+RGRGLFCRS MK+Q AS  FT ++AA+ A+VNTK P+VG+LLL R+++Q ++A+KR
Sbjct: 170 ENLVRGRGLFCRSIMKAQAASLPFTPIYAAMAAIVNTKLPQVGELLLSRLIIQFRKAFKR 229

Query: 340 NDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDL 399
           NDK   +++  FIAHL NQQV HE++A ++L +LL  PTDDSVE+AVG   E G  L+++
Sbjct: 230 NDKAVCISSTTFIAHLCNQQVVHEMLAAQILLLLLHKPTDDSVEIAVGLTREVGQHLEEM 289

Query: 400 SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLT 459
           S      +F++FR ILHE +IDKRVQ++IE LF +RK +++  PA++ ELDLVE+EDQ+T
Sbjct: 290 SGPIALAVFDQFRNILHEADIDKRVQYMIEVLFQVRKDRYKDNPAIKEELDLVEEEDQIT 349

Query: 460 HEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXX 519
           H I L +EI+ +  L+IFK DP + E+E+ Y+ LK  ILGE S          XXXXXXX
Sbjct: 350 HRIGLDDEIETQDGLNIFKYDPQWEEHEEAYKKLKAEILGEGS--------DDXXXXXXX 409

Query: 520 XXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIE 579
           XXXXXXXXXXXXXXX       +LVNLRRTIYLTIMSS+DFEE  HKL+KI L  G E E
Sbjct: 410 XXXXXXXXXXXXXXXIKDQSNTDLVNLRRTIYLTIMSSIDFEECCHKLMKISLPAGLEPE 469

Query: 580 LCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVA 639
           L  M++ECCSQERTY ++YGL+G+RF KIN+++ + F+  F + Y  IHR ETN+LRN+A
Sbjct: 470 LPSMIIECCSQERTYSKFYGLIGERFAKINRLWSDLFENAFAKYYDTIHRYETNRLRNIA 529

Query: 640 KFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTM 699
           +FF H+L TDAL WHVLS I L EE+TTSSSRIFIKILFQ+L+EHLG+  L ER+TD  +
Sbjct: 530 RFFGHMLSTDALGWHVLSVIHLNEEETTSSSRIFIKILFQDLAEHLGLPKLRERMTDELL 589

Query: 700 QDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPR 744
           + SFE +FP DNP+NTRFSIN+FTSIG G LTE LRE+LKNMP+
Sbjct: 590 RPSFEGLFPTDNPRNTRFSINYFTSIGFGVLTEELREFLKNMPK 625

[Close]

BLAST of CsaV3_4G024100 vs. TrEMBL
Match: tr|A0A0A0L1Y4|A0A0A0L1Y4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290770 PE=4 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 2.4e-301
Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX 60
           MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX
Sbjct: 1   MDRKYSRESSDEDEVKGNRRTSRDXXXXXXXXXXXXXNLHREVERGDXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 240
           XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 181 XXXIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 240

Query: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
Sbjct: 241 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 300

Query: 301 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 360
           PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 301 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 360

Query: 361 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 420
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI
Sbjct: 361 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 420

Query: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 480
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD
Sbjct: 421 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 480

Query: 481 PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 PNFLENEKRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 600
           XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 541 XNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 600

Query: 601 LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 660
           LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 601 LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 660

Query: 661 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 720
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 661 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 720

Query: 721 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD 755
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD
Sbjct: 721 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSD 754

[Close]

BLAST of CsaV3_4G024100 vs. TrEMBL
Match: tr|A0A1S3BND2|A0A1S3BND2_CUCME (pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491527 PE=4 SV=1)

HSP 1 Score: 1021.1 bits (2639), Expect = 1.3e-294
Identity = 562/565 (99.47%), Postives = 563/565 (99.65%), Query Frame = 0


Query: 188 EKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ 247
           EKVGTGTIDH QPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ
Sbjct: 238 EKVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQ 297

Query: 248 RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF 307
           RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF
Sbjct: 298 RLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVF 357

Query: 308 AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL 367
           AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL
Sbjct: 358 AALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIAL 417

Query: 368 ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL 427
           ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL
Sbjct: 418 ELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFL 477

Query: 428 IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE 487
           IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE
Sbjct: 478 IEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENE 537

Query: 488 KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLR 547
           KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLVNLR
Sbjct: 538 KRYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLVNLR 597

Query: 548 RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK 607
           RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK
Sbjct: 598 RTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCK 657

Query: 608 INKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT 667
           INKVYQENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT
Sbjct: 658 INKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTT 717

Query: 668 SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL 727
           SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL
Sbjct: 718 SSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGL 777

Query: 728 GGLTENLREYLKNMPRLIMQQQKPV 753
           GGLTENLREYLKNMPRLIMQQQKPV
Sbjct: 778 GGLTENLREYLKNMPRLIMQQQKPV 802

[Close]

BLAST of CsaV3_4G024100 vs. TrEMBL
Match: tr|A0A1S3BNN3|A0A1S3BNN3_CUCME (pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491527 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 3.8e-294
Identity = 561/564 (99.47%), Postives = 562/564 (99.65%), Query Frame = 0


Query: 189 KVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR 248
           KVGTGTIDH QPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR
Sbjct: 189 KVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQR 248

Query: 249 LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA 308
           LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA
Sbjct: 249 LTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFA 308

Query: 309 ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE 368
           ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE
Sbjct: 309 ALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALE 368

Query: 369 LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI 428
           LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI
Sbjct: 369 LLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLI 428

Query: 429 EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK 488
           EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK
Sbjct: 429 EGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEK 488

Query: 489 RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRR 548
           RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLVNLRR
Sbjct: 489 RYEDLKKNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLVNLRR 548

Query: 549 TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI 608
           TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI
Sbjct: 549 TIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKI 608

Query: 609 NKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS 668
           NKVYQENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS
Sbjct: 609 NKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTS 668

Query: 669 SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG 728
           SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG
Sbjct: 669 SSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLG 728

Query: 729 GLTENLREYLKNMPRLIMQQQKPV 753
           GLTENLREYLKNMPRLIMQQQKPV
Sbjct: 729 GLTENLREYLKNMPRLIMQQQKPV 752

[Close]

BLAST of CsaV3_4G024100 vs. TrEMBL
Match: tr|A0A2I4FH26|A0A2I4FH26_9ROSI (pre-mRNA-splicing factor CWC22 homolog OS=Juglans regia OX=51240 GN=LOC108998720 PE=4 SV=1)

HSP 1 Score: 938.7 bits (2425), Expect = 8.5e-270
Identity = 513/554 (92.60%), Postives = 538/554 (97.11%), Query Frame = 0


Query: 195 IDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDAL 254
           ++  +PHRQ +  E NLN D+S LGKSGGVYIPPFKLARMMKEV+DKSS+EYQRLTWDAL
Sbjct: 278 LEDAKPHRQPRLQEGNLNGDASTLGKSGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDAL 337

Query: 255 RKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVV 314
           RKSINGLVNKVNATNIKNIIPELF+ENLIRGRGLFCRSCMKSQM+SPGFTDVFAALVAVV
Sbjct: 338 RKSINGLVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQMSSPGFTDVFAALVAVV 397

Query: 315 NTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL 374
           NTKFPEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL
Sbjct: 398 NTKFPEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL 457

Query: 375 ENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAI 434
           ENPTDDSVEVAVGFVTECGSIL+DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAI
Sbjct: 458 ENPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAI 517

Query: 435 RKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLK 494
           RKAKF+GYPAVRPELDLVEQEDQLTHE SLQ+EIDPEITLDIFK+DPNF+ENE+RYE+++
Sbjct: 518 RKAKFQGYPAVRPELDLVEQEDQLTHEASLQDEIDPEITLDIFKADPNFIENERRYEEVR 577

Query: 495 KNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTI 554
           KNILGEES   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LVNLRRTIYLTI
Sbjct: 578 KNILGEES---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNLRRTIYLTI 637

Query: 555 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQE 614
           MSSVDFEEAGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INKV+QE
Sbjct: 638 MSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQE 697

Query: 615 NFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 674
           NF+KCFVQQYSMIHRLETNKLRNV KFFAHLLGTDALPWHVL+YIRLTEEDTTSSSRIFI
Sbjct: 698 NFEKCFVQQYSMIHRLETNKLRNVGKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFI 757

Query: 675 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 734
           KILFQELSEHLGIRLLNERLTDPTM DSFESIFPRDNPKNTRFSINFFTSIGLGG+TENL
Sbjct: 758 KILFQELSEHLGIRLLNERLTDPTMLDSFESIFPRDNPKNTRFSINFFTSIGLGGITENL 817

Query: 735 REYLKNMPRLIMQQ 749
           REYLKNMPRLIMQQ
Sbjct: 818 REYLKNMPRLIMQQ 828

[Close]

BLAST of CsaV3_4G024100 vs. TrEMBL
Match: tr|A0A2I4DK00|A0A2I4DK00_9ROSI (pre-mRNA-splicing factor CWC22 homolog OS=Juglans regia OX=51240 GN=LOC108980892 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 4.2e-269
Identity = 508/554 (91.70%), Postives = 539/554 (97.29%), Query Frame = 0


Query: 195 IDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDAL 254
           ++  +P RQ +  E N+N D+SNLGKSGGVYIPPFKLARMMKEV+DKSS+EYQRLTWDAL
Sbjct: 222 LEESKPQRQPRLQEGNVNADASNLGKSGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDAL 281

Query: 255 RKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVV 314
           RKSINGLVNKVNA NIKNIIPELF+ENLIRGRGLFCRSCMKSQM+SPGFTDVFAALVAVV
Sbjct: 282 RKSINGLVNKVNAANIKNIIPELFSENLIRGRGLFCRSCMKSQMSSPGFTDVFAALVAVV 341

Query: 315 NTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL 374
           NTKFPEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL
Sbjct: 342 NTKFPEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLL 401

Query: 375 ENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAI 434
           ENPTDDSVEVAVGFVTECGSIL+DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFA+
Sbjct: 402 ENPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAV 461

Query: 435 RKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLK 494
           RKAKF+GYPAVRP+LDLVEQEDQLTHE+SLQ+EIDPEITLDIFK+DPNFLENE+RYE+++
Sbjct: 462 RKAKFQGYPAVRPDLDLVEQEDQLTHEVSLQDEIDPEITLDIFKADPNFLENERRYEEVR 521

Query: 495 KNILGEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTI 554
           K ILGE+S    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTI
Sbjct: 522 KTILGEDS-EDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVNLRRTIYLTI 581

Query: 555 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQE 614
           MSSVDFEEAGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INKV+QE
Sbjct: 582 MSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQE 641

Query: 615 NFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 674
           NF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVL+YIRLTEEDTTSSSRIFI
Sbjct: 642 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFI 701

Query: 675 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 734
           KILFQELSEHLGIRLLNERL++PTMQDSFESIFPRDNPKNTRFSINFFTSIGLGG+TENL
Sbjct: 702 KILFQELSEHLGIRLLNERLSEPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENL 761

Query: 735 REYLKNMPRLIMQQ 749
           REYLKNMPRLIMQQ
Sbjct: 762 REYLKNMPRLIMQQ 774

The following BLAST results are available for this feature:

BLAST of CsaV3_4G024100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142129.1	3.7e-301	100.00	PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus] >KGN54161.1 ...	[more]
XP_008449735.1	2.0e-294	99.47	PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucumis melo]	[more]
XP_008449736.1	5.7e-294	99.47	PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucumis melo]	[more]
XP_022969283.1	1.9e-289	97.01	pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima] >XP_022969291.1 pre-mR...	[more]
XP_022928022.1	2.5e-289	97.19	pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata] >XP_022928025.1 pre-...	[more]

BLAST of CsaV3_4G024100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80930.1	2.6e-248	86.88	MIF4G domain-containing protein / MA3 domain-containing protein	[more]
AT1G52325.1	3.2e-33	44.02	Initiation factor eIF-4 gamma, MA3	[more]
AT5G17930.1	6.4e-13	28.78	MIF4G domain-containing protein / MA3 domain-containing protein	[more]

BLAST of CsaV3_4G024100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8C5N3\|CWC22_MOUSE	2.7e-170	59.05	Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV...	[more]
sp\|Q9HCG8\|CWC22_HUMAN	4.6e-170	58.83	Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=...	[more]
sp\|Q5RA93\|CWC22_PONAB	1.3e-169	57.50	Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=...	[more]
sp\|Q08C72\|CWC22_DANRE	2.3e-169	59.67	Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1	[more]
sp\|Q5BGP1\|CWC22_EMENI	1.4e-166	59.73	Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans (strain FGSC A4 / ATCC 381...	[more]

BLAST of CsaV3_4G024100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1Y4\|A0A0A0L1Y4_CUCSA	2.4e-301	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290770 PE=4 SV=1	[more]
tr\|A0A1S3BND2\|A0A1S3BND2_CUCME	1.3e-294	99.47	pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1S3BNN3\|A0A1S3BNN3_CUCME	3.8e-294	99.47	pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A2I4FH26\|A0A2I4FH26_9ROSI	8.5e-270	92.60	pre-mRNA-splicing factor CWC22 homolog OS=Juglans regia OX=51240 GN=LOC108998720...	[more]
tr\|A0A2I4DK00\|A0A2I4DK00_9ROSI	4.2e-269	91.70	pre-mRNA-splicing factor CWC22 homolog OS=Juglans regia OX=51240 GN=LOC108980892...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR016021	MIF4-like_sf
IPR003890	MIF4G-like_typ-3
IPR003891	Initiation_fac_eIF4g_MI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G024100.1	CsaV3_4G024100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 748..797
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 770..789
None	No IPR available	PANTHER	PTHR18034:SF8	SUBFAMILY NOT NAMED	coord: 7..794
None	No IPR available	PANTHER	PTHR18034	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	coord: 7..794
IPR003891	Initiation factor eIF-4 gamma, MA3	SMART	SM00544	ma3_7	coord: 546..652 e-value: 4.0E-37 score: 139.3
IPR003891	Initiation factor eIF-4 gamma, MA3	PFAM	PF02847	MA3	coord: 546..652 e-value: 6.2E-30 score: 103.4
IPR003891	Initiation factor eIF-4 gamma, MA3	PROSITE	PS51366	MI	coord: 545..661 score: 24.153
IPR003890	MIF4G-like, type 3	SMART	SM00543	if4_15	coord: 255..438 e-value: 1.1E-38 score: 144.5
IPR016021	MIF4G-like domain superfamily	GENE3D	G3DSA:1.25.40.180		coord: 211..498 e-value: 2.4E-93 score: 314.3
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 245..486

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G024100	CSPI04G13740	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G024100	Cucsa.065410	Cucumber (Gy14) v1	cgycucB057
CsaV3_4G024100	CmaCh20G000700	Cucurbita maxima (Rimu)	cmacucB0660
CsaV3_4G024100	CmoCh20G000750	Cucurbita moschata (Rifu)	cmocucB0645
CsaV3_4G024100	Cp4.1LG16g08820	Cucurbita pepo (Zucchini)	cpecucB0346
CsaV3_4G024100	CsGy4G013340	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G024100	Carg06915	Silver-seed gourd	carcucB0559
CsaV3_4G024100	Cla008532	Watermelon (97103) v1	cucwmB364
CsaV3_4G024100	MELO3C014611	Melon (DHL92) v3.5.1	cucmeB294
CsaV3_4G024100	ClCG02G023410	Watermelon (Charleston Gray)	cucwcgB305
CsaV3_4G024100	Lsi10G010460	Bottle gourd (USVL1VR-Ls)	cuclsiB269
CsaV3_4G024100	MELO3C014611.2	Melon (DHL92) v3.6.1	cucmedB286
CsaV3_4G024100	Cla97C02G049500	Watermelon (97103) v2	cucwmbB293
CsaV3_4G024100	Bhi10G000261	Wax gourd	cucwgoB396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G024100	Cucumber (Chinese Long) v3	cuccucB191
CsaV3_4G024100	Silver-seed gourd	carcucB0960
CsaV3_4G024100	Cucumber (Gy14) v2	cgybcucB342
CsaV3_4G024100	Cucurbita maxima (Rimu)	cmacucB0435
CsaV3_4G024100	Cucurbita maxima (Rimu)	cmacucB0726
CsaV3_4G024100	Cucurbita moschata (Rifu)	cmocucB0080
CsaV3_4G024100	Cucurbita moschata (Rifu)	cmocucB0430
CsaV3_4G024100	Cucurbita moschata (Rifu)	cmocucB0713
CsaV3_4G024100	Cucurbita moschata (Rifu)	cmocucB1045
CsaV3_4G024100	Cucurbita pepo (Zucchini)	cpecucB0161
CsaV3_4G024100	Cucurbita pepo (Zucchini)	cpecucB0392
CsaV3_4G024100	Cucurbita pepo (Zucchini)	cpecucB0908
CsaV3_4G024100	Wild cucumber (PI 183967)	cpicucB408
CsaV3_4G024100	Bottle gourd (USVL1VR-Ls)	cuclsiB292
CsaV3_4G024100	Melon (DHL92) v3.5.1	cucmeB281
CsaV3_4G024100	Melon (DHL92) v3.6.1	cucmedB274
CsaV3_4G024100	Watermelon (97103) v1	cucwmB299
CsaV3_4G024100	Wax gourd	cucwgoB425