CsaV3_4G009810 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCTCTTCTCTACACCTCCGATTTCCATCGTTTTCTTCTTTTCACTCCTCATCTTCGTCTTTGCAGTCCGATCTGAGGATATTTCCTCCGCCATCCGCTTGCCTTCTGAAGCCACCAATAACCACGGCGATATAGATCTCTGTTCTGTGTCGGCCCCCTCTTATTGCCCCGTGAAATGCTTTAGGACGGACCCCGTCTGCGGAGTTGATGGCGTTACCTATTGGTGTGGTTGTGCCGATGCTCTGTGTTCAGGTGTCAAGGTCGCCAAGATGGGATTTTGTGAAGTCGGCAACGGGGGTTCTGCGCCTATTCCTGCCCAGGCCCTCCTTCTGGTTCATATTTTGCCGATCATCCTTGGAGTTTCCGTCTTGTTTGGACTCTTCTGA ATGATTCTCTTCTCTACACCTCCGATTTCCATCGTTTTCTTCTTTTCACTCCTCATCTTCGTCTTTGCAGTCCGATCTGAGGATATTTCCTCCGCCATCCGCTTGCCTTCTGAAGCCACCAATAACCACGGCGATATAGATCTCTGTTCTGTGTCGGCCCCCTCTTATTGCCCCGTGAAATGCTTTAGGACGGACCCCGTCTGCGGAGTTGATGGCGTTACCTATTGGTGTGGTTGTGCCGATGCTCTGTGTTCAGGTGTCAAGGTCGCCAAGATGGGATTTTGTGAAGTCGGCAACGGGGGTTCTGCGCCTATTCCTGCCCAGGCCCTCCTTCTGGTTCATATTTTGCCGATCATCCTTGGAGTTTCCGTCTTGTTTGGACTCTTCTGA ATGATTCTCTTCTCTACACCTCCGATTTCCATCGTTTTCTTCTTTTCACTCCTCATCTTCGTCTTTGCAGTCCGATCTGAGGATATTTCCTCCGCCATCCGCTTGCCTTCTGAAGCCACCAATAACCACGGCGATATAGATCTCTGTTCTGTGTCGGCCCCCTCTTATTGCCCCGTGAAATGCTTTAGGACGGACCCCGTCTGCGGAGTTGATGGCGTTACCTATTGGTGTGGTTGTGCCGATGCTCTGTGTTCAGGTGTCAAGGTCGCCAAGATGGGATTTTGTGAAGTCGGCAACGGGGGTTCTGCGCCTATTCCTGCCCAGGCCCTCCTTCTGGTTCATATTTTGCCGATCATCCTTGGAGTTTCCGTCTTGTTTGGACTCTTCTGA MILFSTPPISIVFFFSLLIFVFAVRSEDISSAIRLPSEATNNHGDIDLCSVSAPSYCPVKCFRTDPVCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPAQALLLVHILPIILGVSVLFGLF
BLAST of CsaV3_4G009810 vs. NCBI nr
Match: XP_011653402.1 (PREDICTED: uncharacterized protein LOC101220346 [Cucumis sativus] >KGN53751.1 hypothetical protein Csa_4G120790 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 2.1e-65 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. NCBI nr
Match: XP_016902950.1 (PREDICTED: uncharacterized protein LOC107991954 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 6.7e-59 Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. NCBI nr
Match: XP_004140750.1 (PREDICTED: uncharacterized protein LOC101210178 [Cucumis sativus] >KGN57420.1 hypothetical protein Csa_3G184020 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54 Identity = 114/130 (87.69%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. NCBI nr
Match: XP_022922853.1 (uncharacterized protein LOC111430710 [Cucurbita moschata] >XP_022985062.1 uncharacterized protein LOC111483145 [Cucurbita maxima] >XP_023552497.1 uncharacterized protein LOC111810142 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.9 bits (551), Expect = 4.2e-53 Identity = 111/130 (85.38%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. NCBI nr
Match: XP_008439348.1 (PREDICTED: uncharacterized protein LOC103484162, partial [Cucumis melo]) HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50 Identity = 105/118 (88.98%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TAIR10
Match: AT4G01575.1 (serine protease inhibitor, Kazal-type family protein) HSP 1 Score: 124.8 bits (312), Expect = 3.9e-29 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TAIR10
Match: AT3G61980.1 (serine protease inhibitor, Kazal-type family protein) HSP 1 Score: 97.8 bits (242), Expect = 5.1e-21 Identity = 55/122 (45.08%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TrEMBL
Match: tr|A0A0A0L0T2|A0A0A0L0T2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G120790 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.4e-65 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TrEMBL
Match: tr|A0A1S4E4Q0|A0A1S4E4Q0_CUCME (uncharacterized protein LOC107991954 OS=Cucumis melo OX=3656 GN=LOC107991954 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 4.4e-59 Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TrEMBL
Match: tr|A0A0A0L616|A0A0A0L616_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184020 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 6.6e-55 Identity = 114/130 (87.69%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TrEMBL
Match: tr|A0A1S3AYK1|A0A1S3AYK1_CUCME (uncharacterized protein LOC103484162 OS=Cucumis melo OX=3656 GN=LOC103484162 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50 Identity = 105/118 (88.98%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CsaV3_4G009810 vs. TrEMBL
Match: tr|W9QLJ4|W9QLJ4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001582 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.4e-34 Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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